carray 1.1.4 → 1.1.5
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- checksums.yaml +4 -4
- data/COPYING +56 -0
- data/GPL +340 -0
- data/Gemfile +9 -0
- data/Gemfile.lock +33 -0
- data/LEGAL +50 -0
- data/NOTE +73 -0
- data/Rakefile +20 -0
- data/TODO +5 -0
- data/ca_iter_block.c +242 -0
- data/ca_iter_dimension.c +287 -0
- data/ca_iter_window.c +202 -0
- data/ca_obj_array.c +1189 -0
- data/ca_obj_bitarray.c +523 -0
- data/ca_obj_bitfield.c +636 -0
- data/ca_obj_block.c +885 -0
- data/ca_obj_fake.c +405 -0
- data/ca_obj_farray.c +482 -0
- data/ca_obj_field.c +625 -0
- data/ca_obj_grid.c +738 -0
- data/ca_obj_mapping.c +614 -0
- data/ca_obj_object.c +777 -0
- data/ca_obj_reduce.c +299 -0
- data/ca_obj_refer.c +627 -0
- data/ca_obj_repeat.c +640 -0
- data/ca_obj_select.c +558 -0
- data/ca_obj_shift.c +952 -0
- data/ca_obj_transpose.c +582 -0
- data/ca_obj_unbound_repeat.c +557 -0
- data/ca_obj_window.c +1023 -0
- data/carray.h +1381 -0
- data/carray_access.c +1798 -0
- data/carray_attribute.c +903 -0
- data/carray_call_cfunc.c +1107 -0
- data/carray_cast.c +1155 -0
- data/carray_cast_func.rb +498 -0
- data/carray_class.c +132 -0
- data/carray_conversion.c +518 -0
- data/carray_copy.c +453 -0
- data/carray_core.c +1307 -0
- data/carray_element.c +572 -0
- data/carray_generate.c +681 -0
- data/carray_iterator.c +630 -0
- data/carray_loop.c +462 -0
- data/carray_mask.c +1174 -0
- data/carray_math.rb +834 -0
- data/carray_numeric.c +257 -0
- data/carray_operator.c +582 -0
- data/carray_order.c +1040 -0
- data/carray_random.c +529 -0
- data/carray_sort_addr.c +261 -0
- data/carray_stat.c +2102 -0
- data/carray_stat_proc.rb +1990 -0
- data/carray_test.c +602 -0
- data/carray_undef.c +69 -0
- data/carray_utils.c +740 -0
- data/ext/calculus/carray_calculus.c +792 -0
- data/ext/calculus/carray_interp.c +355 -0
- data/ext/calculus/extconf.rb +12 -0
- data/ext/calculus/lib/autoload/autoload_math_calculus.rb +2 -0
- data/ext/calculus/lib/math/calculus.rb +119 -0
- data/ext/calculus/lib/math/interp/adapter_interp1d.rb +31 -0
- data/ext/dataframe/API.txt +11 -0
- data/ext/dataframe/extconf.rb +3 -0
- data/ext/dataframe/lib/carray/autoload/autoload_dataframe_dataframe.rb +14 -0
- data/ext/dataframe/lib/carray/dataframe/dataframe.rb +1104 -0
- data/ext/dataframe/sample/test_uniq_sort.rb +5 -0
- data/ext/fortio/extconf.rb +3 -0
- data/ext/fortio/lib/carray/autoload/autoload_fortran_format.rb +5 -0
- data/ext/fortio/lib/carray/io/fortran_format.rb +43 -0
- data/ext/fortio/lib/fortio.rb +3 -0
- data/ext/fortio/lib/fortio/fortran_format.rb +603 -0
- data/ext/fortio/lib/fortio/fortran_format.tab.rb +536 -0
- data/ext/fortio/lib/fortio/fortran_format.y +215 -0
- data/ext/fortio/lib/fortio/fortran_namelist.rb +151 -0
- data/ext/fortio/lib/fortio/fortran_namelist.tab.rb +470 -0
- data/ext/fortio/lib/fortio/fortran_namelist.y +213 -0
- data/ext/fortio/lib/fortio/fortran_sequential.rb +345 -0
- data/ext/fortio/ruby_fortio.c +182 -0
- data/ext/fortio/test/test_H.rb +5 -0
- data/ext/fortio/test/test_T.rb +7 -0
- data/ext/fortio/test/test_fortran_format.rb +86 -0
- data/ext/fortio/test/test_namelist.rb +25 -0
- data/ext/fortio/test/test_sequential.rb +13 -0
- data/ext/fortio/test/test_sequential2.rb +13 -0
- data/ext/fortio/work/test.rb +10 -0
- data/ext/fortio/work/test_e.rb +19 -0
- data/ext/fortio/work/test_ep.rb +10 -0
- data/ext/fortio/work/test_parse.rb +12 -0
- data/ext/imagemap/carray_imagemap.c +495 -0
- data/ext/imagemap/doc/call_graph.dot +28 -0
- data/ext/imagemap/draw.c +567 -0
- data/ext/imagemap/extconf.rb +13 -0
- data/ext/imagemap/lib/autoload/autoload_graphics_imagemap.rb +1 -0
- data/ext/imagemap/lib/graphics/imagemap.rb +273 -0
- data/ext/imagemap/lib/image_map.rb +4 -0
- data/ext/imagemap/test/swath_index.rb +83 -0
- data/ext/imagemap/test/swath_warp.rb +99 -0
- data/ext/imagemap/test/test.rb +23 -0
- data/ext/imagemap/test/test_image.rb +42 -0
- data/ext/imagemap/test/test_line.rb +14 -0
- data/ext/imagemap/test/test_rotate.rb +17 -0
- data/ext/imagemap/test/test_triangle.rb +20 -0
- data/ext/imagemap/test/test_warp.rb +26 -0
- data/ext/mathfunc/carray_mathfunc.c +321 -0
- data/ext/mathfunc/extconf.rb +18 -0
- data/ext/mathfunc/lib/autoload/autoload_math_mathfunc.rb +1 -0
- data/ext/mathfunc/lib/math/mathfunc.rb +15 -0
- data/ext/mathfunc/test/test_hypot.rb +5 -0
- data/ext/mathfunc/test/test_j0.rb +22 -0
- data/ext/mathfunc/test/test_jn.rb +8 -0
- data/ext/mathfunc/test/test_sph.rb +9 -0
- data/ext/narray/README +22 -0
- data/ext/narray/ca_wrap_narray.c +491 -0
- data/ext/narray/carray_narray.c +21 -0
- data/ext/narray/extconf.rb +57 -0
- data/ext/narray/lib/autoload/autoload_math_narray.rb +1 -0
- data/ext/narray/lib/autoload/autoload_math_narray_miss.rb +11 -0
- data/ext/narray/lib/math/narray.rb +17 -0
- data/ext/narray/lib/math/narray_miss.rb +45 -0
- data/extconf.rb +3 -25
- data/lib/carray.rb +28 -0
- data/lib/carray/autoload/autoload_base.rb +23 -0
- data/lib/carray/autoload/autoload_graphics_gnuplot.rb +2 -0
- data/lib/carray/autoload/autoload_io_csv.rb +14 -0
- data/lib/carray/autoload/autoload_io_excel.rb +5 -0
- data/lib/carray/autoload/autoload_io_imagemagick.rb +6 -0
- data/lib/carray/autoload/autoload_io_pg.rb +6 -0
- data/lib/carray/autoload/autoload_io_sqlite3.rb +12 -0
- data/lib/carray/autoload/autoload_io_table.rb +1 -0
- data/lib/carray/autoload/autoload_math_histogram.rb +5 -0
- data/lib/carray/autoload/autoload_math_interp.rb +4 -0
- data/lib/carray/autoload/autoload_math_recurrence.rb +6 -0
- data/lib/carray/autoload/autoload_object_iterator.rb +1 -0
- data/lib/carray/autoload/autoload_object_link.rb +1 -0
- data/lib/carray/autoload/autoload_object_pack.rb +2 -0
- data/lib/carray/base/autoload.rb +94 -0
- data/lib/carray/base/basic.rb +1051 -0
- data/lib/carray/base/inspect.rb +252 -0
- data/lib/carray/base/iterator.rb +367 -0
- data/lib/carray/base/math.rb +403 -0
- data/lib/carray/base/obsolete.rb +93 -0
- data/lib/carray/base/serialize.rb +260 -0
- data/lib/carray/base/struct.rb +634 -0
- data/lib/carray/graphics/gnuplot.rb +2116 -0
- data/lib/carray/info.rb +112 -0
- data/lib/carray/io/csv.rb +560 -0
- data/lib/carray/io/excel.rb +26 -0
- data/lib/carray/io/imagemagick.rb +231 -0
- data/lib/carray/io/pg.rb +101 -0
- data/lib/carray/io/sqlite3.rb +202 -0
- data/lib/carray/io/table.rb +77 -0
- data/lib/carray/math/histogram.rb +179 -0
- data/lib/carray/math/interp.rb +57 -0
- data/lib/carray/math/interp/adapter_gsl_spline.rb +47 -0
- data/lib/carray/math/recurrence.rb +95 -0
- data/lib/carray/mkmf.rb +145 -0
- data/lib/carray/object/ca_obj_iterator.rb +52 -0
- data/lib/carray/object/ca_obj_link.rb +52 -0
- data/lib/carray/object/ca_obj_pack.rb +101 -0
- data/mkmath.rb +731 -0
- data/mt19937ar.c +182 -0
- data/mt19937ar.h +86 -0
- data/rdoc_main.rb +27 -0
- data/rdoc_math.rb +5 -0
- data/rdoc_stat.rb +31 -0
- data/ruby_carray.c +242 -0
- data/ruby_ccomplex.c +497 -0
- data/ruby_float_func.c +83 -0
- data/spec/CABlockIterator/CABlockIterator_spec.rb +113 -0
- data/spec/CArray/bug/store_spec.rb +27 -0
- data/spec/CArray/index/repeat_spec.rb +10 -0
- data/spec/CArray/method/eq_spec.rb +80 -0
- data/spec/CArray/method/is_nan_spec.rb +12 -0
- data/spec/CArray/method/ne_spec.rb +18 -0
- data/spec/CArray/method/round_spec.rb +11 -0
- data/spec/CArray/object/_attribute_spec.rb +32 -0
- data/spec/CArray/object/s_new_spec.rb +31 -0
- data/spec/CArray/serialize/Serialization_spec.rb +89 -0
- data/spec/spec_all.rb +11 -0
- data/test/test_ALL.rb +50 -0
- data/test/test_CABitfield.rb +59 -0
- data/test/test_CABlock.rb +208 -0
- data/test/test_CAField.rb +40 -0
- data/test/test_CAGrid.rb +76 -0
- data/test/test_CAMapping.rb +106 -0
- data/test/test_CAMmap.rb +11 -0
- data/test/test_CARefer.rb +94 -0
- data/test/test_CARepeat.rb +66 -0
- data/test/test_CASelect.rb +23 -0
- data/test/test_CAShift.rb +17 -0
- data/test/test_CATranspose.rb +61 -0
- data/test/test_CAVirtual.rb +214 -0
- data/test/test_CAWindow.rb +55 -0
- data/test/test_CAWrap.rb +9 -0
- data/test/test_CArray.rb +228 -0
- data/test/test_CComplex.rb +83 -0
- data/test/test_CScalar.rb +91 -0
- data/test/test_attribute.rb +281 -0
- data/test/test_block_iterator.rb +17 -0
- data/test/test_boolean.rb +99 -0
- data/test/test_cast.rb +33 -0
- data/test/test_class.rb +85 -0
- data/test/test_complex.rb +43 -0
- data/test/test_composite.rb +125 -0
- data/test/test_convert.rb +79 -0
- data/test/test_copy.rb +141 -0
- data/test/test_creation.rb +85 -0
- data/test/test_element.rb +146 -0
- data/test/test_extream.rb +55 -0
- data/test/test_generate.rb +75 -0
- data/test/test_index.rb +71 -0
- data/test/test_mask.rb +578 -0
- data/test/test_math.rb +98 -0
- data/test/test_narray.rb +64 -0
- data/test/test_order.rb +147 -0
- data/test/test_random.rb +15 -0
- data/test/test_ref_store.rb +211 -0
- data/test/test_stat.rb +414 -0
- data/test/test_struct.rb +72 -0
- data/test/test_virtual.rb +49 -0
- data/utils/ca_ase.rb +21 -0
- data/utils/ca_methods.rb +15 -0
- data/utils/cast_checker.rb +30 -0
- data/utils/create_rdoc.sh +9 -0
- data/utils/diff_method.rb +52 -0
- data/utils/extract_rdoc.rb +27 -0
- data/utils/make_tgz.sh +3 -0
- data/utils/remove_resource_fork.sh +5 -0
- data/version.h +3 -3
- metadata +266 -1
@@ -0,0 +1,792 @@
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/* ---------------------------------------------------------------------------
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carray/carray_calculus.c
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This file is part of Ruby/CArray extension library.
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You can redistribute it and/or modify it under the terms of
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the Ruby Licence.
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Copyright (C) 2005 Hiroki Motoyoshi
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---------------------------------------------------------------------------- */
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#include "ruby.h"
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#include "carray.h"
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#include <math.h>
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#include <float.h>
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/* ----------------------------------------------------------------- */
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static double
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simpson (double *x, double *y, int n)
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{
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double s;
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if ( n < 2 ) {
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return 0.0/0.0;
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}
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else if ( n == 2 ) {
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s = (x[1]-x[0])*(y[1]+y[0])*0.5;
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return s;
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}
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else if ( n % 2 == 0 ) {
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double x0, x1, x2, x3;
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double h, m, a1, a2, c0, c1, c2, c3;
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x0 = x[0];
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x1 = x[1];
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x2 = x[2];
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x3 = x[3];
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h = x3 - x0;
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m = (x3 + x0)/2;
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a1 = x1 - m;
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a2 = x2 - m;
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c0 = 1.0 + 2.0*a1*a2/((x0-x1)*(x0-x2));
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c1 = h*h*a2/((x1-x2)*(x1-x0)*(x1-x3));
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c2 = h*h*a1/((x2-x1)*(x2-x0)*(x2-x3));
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c3 = 1.0 + 2.0*a1*a2/((x3-x1)*(x3-x2));
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s = (c0*y[0]+c1*y[1]+c2*y[2]+c3*y[3])*h/6.0;
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if ( n > 4 ) {
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s += simpson(x+3, y+3, n-3);
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}
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return s;
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}
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else {
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double x0, x1, x2;
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double h, m, c0, c1, c2;
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int i;
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s = 0.0;
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for (i=0; i<n-2; i+=2) {
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x0 = x[i];
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x1 = x[i+1];
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x2 = x[i+2];
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h = x2-x0;
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m = 0.5*(x2+x0);
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c0 = 3.0 - h/(x1-x0);
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c1 = h*(x2-x0)/((x2-x1)*(x1-x0));
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c2 = 3.0 - h/(x2-x1);
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s += (c0*y[i]+c1*y[i+1]+c2*y[i+2])*h/6.0;
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}
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return s;
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}
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}
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static VALUE
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rb_ca_integrate (volatile VALUE self, volatile VALUE vsc)
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{
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CArray *sc, *ca;
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double ans;
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ca = ca_wrap_readonly(self, CA_DOUBLE);
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sc = ca_wrap_readonly(vsc, CA_DOUBLE);
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if ( ca->elements != sc->elements ) {
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rb_raise(rb_eRuntimeError, "data num mismatch");
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}
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if ( ca_is_any_masked(ca) || ca_is_any_masked(sc) ) {
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rb_raise(rb_eRuntimeError,
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"can't calculate integrattion when masked elements exist");
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}
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ca_attach_n(2, ca, sc);
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ans = simpson((double*)sc->ptr, (double*)ca->ptr, ca->elements);
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ca_detach_n(2, ca, sc);
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return rb_float_new(ans);
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}
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/* ----------------------------------------------------------------- */
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static int
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linear_index (int n, double *y, double yy, double *idx)
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{
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int a, b, c, x1;
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double ya, yb, yc;
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double y1, y2;
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double rest;
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if ( yy <= y[0] ) {
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x1 = 0;
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goto found;
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}
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if ( yy >= y[n-1] ) {
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x1 = n-2;
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goto found;
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}
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/* check for equally spaced scale */
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a = (int)((yy-y[0])/(y[n-1]-y[0])*(n-1));
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if ( a >= 0 && a < n-1 ) {
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if ( (y[a] - yy) * (y[a+1] - yy) <= 0 ) { /* lucky case */
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x1 = a;
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goto found;
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}
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}
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/* binary section method */
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a = 0;
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b = n-1;
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ya = y[a];
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yb = y[b];
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if ( ya > yb ) {
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return -1; /* input scale array should have accending order */
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}
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while ( (b - a) >= 1 ) {
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c = (a + b)/2;
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yc = y[c];
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if ( a == c ) {
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break;
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}
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if ( yc == yy ) {
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a = c;
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break;
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}
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else if ( (ya - yy) * (yc - yy) <= 0 ) {
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b = c;
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yb = yc;
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}
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else {
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a = c;
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ya = yc;
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}
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if ( ya > yb ) {
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return -1; /* input scale array should have accending order */
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}
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}
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x1 = a;
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found:
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y1 = y[x1];
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y2 = y[x1+1];
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rest = (yy-y1)/(y2-y1);
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+
if ( fabs(y2-yy)/fabs(y2) < DBL_EPSILON*100 ) {
|
179
|
+
*idx = (double) (x1 + 1);
|
180
|
+
}
|
181
|
+
else if ( fabs(y1-yy)/fabs(y1) < DBL_EPSILON*100 ) {
|
182
|
+
*idx = (double) x1;
|
183
|
+
}
|
184
|
+
else {
|
185
|
+
*idx = rest + (double) x1;
|
186
|
+
}
|
187
|
+
|
188
|
+
return 0;
|
189
|
+
}
|
190
|
+
|
191
|
+
static VALUE
|
192
|
+
rb_ca_binary_search_linear_index (volatile VALUE self, volatile VALUE vx)
|
193
|
+
{
|
194
|
+
volatile VALUE out, out0;
|
195
|
+
CArray *ca, *sc, *cx, *co0, *co;
|
196
|
+
int32_t n;
|
197
|
+
double *x;
|
198
|
+
double *px;
|
199
|
+
double *po;
|
200
|
+
int i;
|
201
|
+
|
202
|
+
Data_Get_Struct(self, CArray, ca);
|
203
|
+
|
204
|
+
if ( rb_ca_is_any_masked(self) ) {
|
205
|
+
rb_raise(rb_eRuntimeError, "self should not have any masked elements");
|
206
|
+
}
|
207
|
+
|
208
|
+
sc = ca_wrap_readonly(self, CA_FLOAT64);
|
209
|
+
cx = ca_wrap_readonly(vx, CA_FLOAT64);
|
210
|
+
|
211
|
+
co0 = carray_new(ca->data_type, cx->rank, cx->dim, 0, NULL);
|
212
|
+
out = out0 = ca_wrap_struct(co0);
|
213
|
+
co = ca_wrap_writable(out, CA_FLOAT64);
|
214
|
+
|
215
|
+
ca_attach_n(3, sc, cx, co);
|
216
|
+
|
217
|
+
n = sc->elements;
|
218
|
+
x = (double*) sc->ptr;
|
219
|
+
px = (double*) cx->ptr;
|
220
|
+
po = (double*) co->ptr;
|
221
|
+
|
222
|
+
ca_update_mask(cx);
|
223
|
+
if ( cx->mask ) {
|
224
|
+
boolean8_t *mx, *mo;
|
225
|
+
ca_create_mask(co);
|
226
|
+
mx = (boolean8_t *) cx->mask->ptr;
|
227
|
+
mo = (boolean8_t *) co->mask->ptr;
|
228
|
+
for (i=0; i<cx->elements; i++) {
|
229
|
+
if ( ! *mx ) {
|
230
|
+
linear_index(n, x, *px, po);
|
231
|
+
}
|
232
|
+
else {
|
233
|
+
*mo = 1;
|
234
|
+
}
|
235
|
+
mx++; mo++; px++, po++;
|
236
|
+
}
|
237
|
+
}
|
238
|
+
else {
|
239
|
+
for (i=0; i<cx->elements; i++) {
|
240
|
+
linear_index(n, x, *px, po);
|
241
|
+
px++, po++;
|
242
|
+
}
|
243
|
+
}
|
244
|
+
|
245
|
+
ca_sync(co);
|
246
|
+
ca_detach_n(3, sc, cx, co);
|
247
|
+
|
248
|
+
if ( rb_ca_is_scalar(vx) ) {
|
249
|
+
return rb_funcall(out0, rb_intern("[]"), 1, INT2FIX(0));
|
250
|
+
}
|
251
|
+
else {
|
252
|
+
return out0;
|
253
|
+
}
|
254
|
+
}
|
255
|
+
|
256
|
+
static double
|
257
|
+
interp_lin (double *x, double *y, double xx)
|
258
|
+
{
|
259
|
+
double a, b;
|
260
|
+
double xa, xb;
|
261
|
+
double ab;
|
262
|
+
double fa, fb;
|
263
|
+
a = x[0];
|
264
|
+
b = x[1];
|
265
|
+
fa = y[0];
|
266
|
+
fb = y[1];
|
267
|
+
xa = xx - a;
|
268
|
+
xb = xx - b;
|
269
|
+
ab = a - b;
|
270
|
+
return -xa*fb/ab + xb*fa/ab;
|
271
|
+
}
|
272
|
+
|
273
|
+
static double
|
274
|
+
deriv_lin (double *x, double *y, double xx)
|
275
|
+
{
|
276
|
+
double a, b;
|
277
|
+
double ab;
|
278
|
+
double fa, fb;
|
279
|
+
a = x[0];
|
280
|
+
b = x[1];
|
281
|
+
fa = y[0];
|
282
|
+
fb = y[1];
|
283
|
+
ab = a - b;
|
284
|
+
return -fb/ab + fa/ab;
|
285
|
+
}
|
286
|
+
|
287
|
+
static double
|
288
|
+
interp_qual (double *x, double *y, double xx)
|
289
|
+
{
|
290
|
+
double a, b, c;
|
291
|
+
double xa, xb, xc;
|
292
|
+
double ab, bc, ca;
|
293
|
+
double fa, fb, fc;
|
294
|
+
a = x[0];
|
295
|
+
b = x[1];
|
296
|
+
c = x[2];
|
297
|
+
fa = y[0];
|
298
|
+
fb = y[1];
|
299
|
+
fc = y[2];
|
300
|
+
xa = xx - a;
|
301
|
+
xb = xx - b;
|
302
|
+
xc = xx - c;
|
303
|
+
ab = a - b;
|
304
|
+
bc = b - c;
|
305
|
+
ca = c - a;
|
306
|
+
return -(xa*xb*fc/ca/bc + xb*xc*fa/ab/ca + xc*xa*fb/bc/ab);
|
307
|
+
}
|
308
|
+
|
309
|
+
static double
|
310
|
+
deriv_qual (double *x, double *y, double xx)
|
311
|
+
{
|
312
|
+
double a, b, c;
|
313
|
+
double xa, xb, xc;
|
314
|
+
double ab, bc, ca;
|
315
|
+
double fa, fb, fc;
|
316
|
+
a = x[0];
|
317
|
+
b = x[1];
|
318
|
+
c = x[2];
|
319
|
+
fa = y[0];
|
320
|
+
fb = y[1];
|
321
|
+
fc = y[2];
|
322
|
+
xa = xx - a;
|
323
|
+
xb = xx - b;
|
324
|
+
xc = xx - c;
|
325
|
+
ab = a - b;
|
326
|
+
bc = b - c;
|
327
|
+
ca = c - a;
|
328
|
+
return - (xa+xb)*fc/ca/bc
|
329
|
+
- (xb+xc)*fa/ab/ca
|
330
|
+
- (xc+xa)*fb/bc/ab;
|
331
|
+
}
|
332
|
+
|
333
|
+
static double
|
334
|
+
interp_cubic (double *x, double *y, double xx)
|
335
|
+
{
|
336
|
+
double a, b, c, d;
|
337
|
+
double xa, xb, xc, xd;
|
338
|
+
double ab, bc, cd, da, db, ac;
|
339
|
+
double fa, fb, fc, fd;
|
340
|
+
a = x[0];
|
341
|
+
b = x[1];
|
342
|
+
c = x[2];
|
343
|
+
d = x[3];
|
344
|
+
fa = y[0];
|
345
|
+
fb = y[1];
|
346
|
+
fc = y[2];
|
347
|
+
fd = y[3];
|
348
|
+
xa = xx - a;
|
349
|
+
xb = xx - b;
|
350
|
+
xc = xx - c;
|
351
|
+
xd = xx - d;
|
352
|
+
ab = a - b;
|
353
|
+
bc = b - c;
|
354
|
+
cd = c - d;
|
355
|
+
da = d - a;
|
356
|
+
db = d - b;
|
357
|
+
ac = a - c;
|
358
|
+
return -xa*xb*xc*fd/da/db/cd - xb*xc*xd*fa/ab/ac/da +
|
359
|
+
xc*xd*xa*fb/bc/db/ab + xd*xa*xb*fc/cd/ac/bc;
|
360
|
+
}
|
361
|
+
|
362
|
+
static double
|
363
|
+
deriv_cubic (double *x, double *y, double xx)
|
364
|
+
{
|
365
|
+
double a, b, c, d;
|
366
|
+
double xa, xb, xc, xd;
|
367
|
+
double ab, bc, cd, da, db, ac;
|
368
|
+
double fa, fb, fc, fd;
|
369
|
+
a = x[0];
|
370
|
+
b = x[1];
|
371
|
+
c = x[2];
|
372
|
+
d = x[3];
|
373
|
+
fa = y[0];
|
374
|
+
fb = y[1];
|
375
|
+
fc = y[2];
|
376
|
+
fd = y[3];
|
377
|
+
xa = xx - a;
|
378
|
+
xb = xx - b;
|
379
|
+
xc = xx - c;
|
380
|
+
xd = xx - d;
|
381
|
+
ab = a - b;
|
382
|
+
bc = b - c;
|
383
|
+
cd = c - d;
|
384
|
+
da = d - a;
|
385
|
+
db = d - b;
|
386
|
+
ac = a - c;
|
387
|
+
return - (xb*xc+xa*xc+xa*xb)*fd/da/db/cd
|
388
|
+
- (xc*xd+xb*xd+xb*xc)*fa/ab/ac/da
|
389
|
+
+ (xd*xa+xc*xa+xc*xd)*fb/bc/db/ab
|
390
|
+
+ (xa*xb+xd*xb+xd*xa)*fc/cd/ac/bc;
|
391
|
+
}
|
392
|
+
|
393
|
+
static double
|
394
|
+
interp_penta (double *x, double *y, double xx)
|
395
|
+
{
|
396
|
+
double a, b, c, d, e, f;
|
397
|
+
double xa, xb, xc, xd, xe, xf;
|
398
|
+
double ya, yb, yc, yd, ye, yf;
|
399
|
+
double ab, ac, ad, ae, af;
|
400
|
+
double bc, bd, be, bf;
|
401
|
+
double cd, ce, cf;
|
402
|
+
double de, df;
|
403
|
+
double ef;
|
404
|
+
a = x[0];
|
405
|
+
b = x[1];
|
406
|
+
c = x[2];
|
407
|
+
d = x[3];
|
408
|
+
e = x[4];
|
409
|
+
f = x[5];
|
410
|
+
ya = y[0];
|
411
|
+
yb = y[1];
|
412
|
+
yc = y[2];
|
413
|
+
yd = y[3];
|
414
|
+
ye = y[4];
|
415
|
+
yf = y[5];
|
416
|
+
xa = xx - a;
|
417
|
+
xb = xx - b;
|
418
|
+
xc = xx - c;
|
419
|
+
xd = xx - d;
|
420
|
+
xe = xx - e;
|
421
|
+
xf = xx - f;
|
422
|
+
ab = a - b;
|
423
|
+
ac = a - c;
|
424
|
+
ad = a - d;
|
425
|
+
ae = a - e;
|
426
|
+
af = a - f;
|
427
|
+
bc = b - c;
|
428
|
+
bd = b - d;
|
429
|
+
be = b - e;
|
430
|
+
bf = b - f;
|
431
|
+
cd = c - d;
|
432
|
+
ce = c - e;
|
433
|
+
cf = c - f;
|
434
|
+
de = d - e;
|
435
|
+
df = d - f;
|
436
|
+
ef = e - f;
|
437
|
+
return ya*xb*xc*xd*xe*xf/(ab*ac*ad*ae*af)
|
438
|
+
- xa*yb*xc*xd*xe*xf/(ab*bc*bd*be*bf)
|
439
|
+
+ xa*xb*yc*xd*xe*xf/(ac*bc*cd*ce*cf)
|
440
|
+
- xa*xb*xc*yd*xe*xf/(ad*bd*cd*de*df)
|
441
|
+
+ xa*xb*xc*xd*ye*xf/(ae*be*ce*de*ef)
|
442
|
+
- xa*xb*xc*xd*xe*yf/(af*bf*cf*df*ef);
|
443
|
+
}
|
444
|
+
|
445
|
+
|
446
|
+
static double
|
447
|
+
deriv_penta (double *x, double *y, double xx)
|
448
|
+
{
|
449
|
+
double a, b, c, d, e, f;
|
450
|
+
double xa, xb, xc, xd, xe, xf;
|
451
|
+
double ya, yb, yc, yd, ye, yf;
|
452
|
+
double ab, ac, ad, ae, af;
|
453
|
+
double bc, bd, be, bf;
|
454
|
+
double cd, ce, cf;
|
455
|
+
double de, df;
|
456
|
+
double ef;
|
457
|
+
a = x[0];
|
458
|
+
b = x[1];
|
459
|
+
c = x[2];
|
460
|
+
d = x[3];
|
461
|
+
e = x[4];
|
462
|
+
f = x[5];
|
463
|
+
ya = y[0];
|
464
|
+
yb = y[1];
|
465
|
+
yc = y[2];
|
466
|
+
yd = y[3];
|
467
|
+
ye = y[4];
|
468
|
+
yf = y[5];
|
469
|
+
xa = xx - a;
|
470
|
+
xb = xx - b;
|
471
|
+
xc = xx - c;
|
472
|
+
xd = xx - d;
|
473
|
+
xe = xx - e;
|
474
|
+
xf = xx - f;
|
475
|
+
ab = a - b;
|
476
|
+
ac = a - c;
|
477
|
+
ad = a - d;
|
478
|
+
ae = a - e;
|
479
|
+
af = a - f;
|
480
|
+
bc = b - c;
|
481
|
+
bd = b - d;
|
482
|
+
be = b - e;
|
483
|
+
bf = b - f;
|
484
|
+
cd = c - d;
|
485
|
+
ce = c - e;
|
486
|
+
cf = c - f;
|
487
|
+
de = d - e;
|
488
|
+
df = d - f;
|
489
|
+
ef = e - f;
|
490
|
+
return (xc*xd*xe*xf+xb*xd*xe*xf+xb*xc*xe*xf+xb*xc*xd*xf+xb*xc*xd*xe)*ya/(ab*ac*ad*ae*af)
|
491
|
+
- (xc*xd*xe*xf+xa*xd*xe*xf+xa*xc*xe*xf+xa*xc*xd*xf+xa*xc*xd*xe)*yb/(ab*bc*bd*be*bf)
|
492
|
+
+ (xb*xd*xe*xf+xa*xd*xe*xf+xa*xb*xe*xf+xa*xb*xd*xf+xa*xb*xd*xe)*yc/(ac*bc*cd*ce*cf)
|
493
|
+
- (xb*xc*xe*xf+xa*xc*xe*xf+xa*xb*xe*xf+xa*xb*xc*xf+xa*xb*xc*xe)*yd/(ad*bd*cd*de*df)
|
494
|
+
+ (xb*xc*xd*xf+xa*xc*xd*xf+xa*xb*xd*xf+xa*xb*xc*xf+xa*xb*xc*xd)*ye/(ae*be*ce*de*ef)
|
495
|
+
- (xb*xc*xd*xe+xa*xc*xd*xe+xa*xb*xd*xe+xa*xb*xc*xe+xa*xb*xc*xd)*yf/(af*bf*cf*df*ef);
|
496
|
+
}
|
497
|
+
|
498
|
+
static double
|
499
|
+
interpolate_linear (double *x, double *y, int n, double xx)
|
500
|
+
{
|
501
|
+
double ri;
|
502
|
+
int i0;
|
503
|
+
if ( n == 1) {
|
504
|
+
return y[0];
|
505
|
+
}
|
506
|
+
if ( xx == x[0] ) {
|
507
|
+
return y[0];
|
508
|
+
}
|
509
|
+
if ( xx == x[1] ) {
|
510
|
+
return y[1];
|
511
|
+
}
|
512
|
+
if ( n == 2 ) {
|
513
|
+
return interp_lin(x, y, xx);
|
514
|
+
}
|
515
|
+
linear_index(n, x, xx, &ri);
|
516
|
+
i0 = floor(ri);
|
517
|
+
if ( i0 <= 0 ) {
|
518
|
+
i0 = 0;
|
519
|
+
}
|
520
|
+
else if ( i0 + 1 >= n - 1 ) {
|
521
|
+
i0 = n - 2;
|
522
|
+
}
|
523
|
+
return interp_lin(&x[i0], &y[i0], xx);
|
524
|
+
}
|
525
|
+
|
526
|
+
static double
|
527
|
+
interpolate_cubic (double *x, double *y, int n, double xx)
|
528
|
+
{
|
529
|
+
double ri;
|
530
|
+
int i0;
|
531
|
+
if ( n == 1) {
|
532
|
+
return y[0];
|
533
|
+
}
|
534
|
+
if ( xx == x[0] ) {
|
535
|
+
return y[0];
|
536
|
+
}
|
537
|
+
if ( xx == x[1] ) {
|
538
|
+
return y[1];
|
539
|
+
}
|
540
|
+
if ( xx == x[2] ) {
|
541
|
+
return y[2];
|
542
|
+
}
|
543
|
+
if ( n == 2 ) {
|
544
|
+
return interp_lin(x, y, xx);
|
545
|
+
}
|
546
|
+
if ( n == 3 ) {
|
547
|
+
return interp_qual(x, y, xx);
|
548
|
+
}
|
549
|
+
linear_index(n, x, xx, &ri);
|
550
|
+
i0 = floor(ri) - 1;
|
551
|
+
if ( i0 <= 0 ) {
|
552
|
+
i0 = 0;
|
553
|
+
}
|
554
|
+
else if ( i0 + 3 >= n - 1 ) {
|
555
|
+
i0 = n - 4;
|
556
|
+
}
|
557
|
+
return interp_cubic(&x[i0], &y[i0], xx);
|
558
|
+
}
|
559
|
+
|
560
|
+
static double
|
561
|
+
differentiate (double *x, double *y, int n, double xx)
|
562
|
+
{
|
563
|
+
double ri;
|
564
|
+
int i0;
|
565
|
+
switch ( n ) {
|
566
|
+
case 1:
|
567
|
+
return 0.0/0.0;
|
568
|
+
case 2:
|
569
|
+
return deriv_lin(x, y, xx);
|
570
|
+
case 3:
|
571
|
+
return deriv_qual(x, y, xx);
|
572
|
+
case 4:
|
573
|
+
return deriv_cubic(x, y, xx);
|
574
|
+
}
|
575
|
+
linear_index(n, x, xx, &ri);
|
576
|
+
i0 = floor(ri) - 1;
|
577
|
+
if ( i0 <= 0 ) {
|
578
|
+
i0 = 0;
|
579
|
+
}
|
580
|
+
else if ( n == 5 && i0 + 4 > n - 1 ) {
|
581
|
+
i0 = n - 5;
|
582
|
+
}
|
583
|
+
else if ( i0 + 5 > n - 1 ) {
|
584
|
+
i0 = n - 6;
|
585
|
+
}
|
586
|
+
if ( n == 5 ) {
|
587
|
+
return deriv_cubic(&x[i0], &y[i0], xx);
|
588
|
+
}
|
589
|
+
else {
|
590
|
+
return deriv_penta(&x[i0], &y[i0], xx);
|
591
|
+
}
|
592
|
+
}
|
593
|
+
|
594
|
+
static VALUE
|
595
|
+
rb_ca_interpolate (int argc, VALUE *argv, VALUE self)
|
596
|
+
{
|
597
|
+
volatile VALUE rval = self;
|
598
|
+
volatile VALUE vsc, vx, ropt, rtype = Qnil, out0, out;
|
599
|
+
CArray *ca, *sc, *cv, *cx, *co0, *co;
|
600
|
+
char *typename = NULL;
|
601
|
+
int type = 0;
|
602
|
+
double *px, *po;
|
603
|
+
int32_t i;
|
604
|
+
|
605
|
+
Data_Get_Struct(self, CArray, ca);
|
606
|
+
|
607
|
+
rb_scan_args(argc, argv, "21", &vsc, &vx, &ropt);
|
608
|
+
rb_scan_options(ropt, "type", &rtype);
|
609
|
+
|
610
|
+
if ( ! NIL_P(rtype) ) {
|
611
|
+
Check_Type(rtype, T_STRING);
|
612
|
+
typename = StringValuePtr(rtype);
|
613
|
+
}
|
614
|
+
|
615
|
+
|
616
|
+
if ( typename == NULL || ! strncmp("cubic", typename, 5) ) {
|
617
|
+
type = 3;
|
618
|
+
}
|
619
|
+
else if ( ! strncmp("linear", typename, 6) ) {
|
620
|
+
type = 1;
|
621
|
+
}
|
622
|
+
else {
|
623
|
+
volatile VALUE inspect = rb_inspect(rtype);
|
624
|
+
rb_raise(rb_eRuntimeError,
|
625
|
+
"invalid interpolation type <%s>", StringValuePtr(inspect));
|
626
|
+
}
|
627
|
+
|
628
|
+
cv = ca_wrap_readonly(rval, CA_DOUBLE);
|
629
|
+
sc = ca_wrap_readonly(vsc, CA_DOUBLE);
|
630
|
+
|
631
|
+
if ( ca_is_any_masked(cv) || ca_is_any_masked(sc) ) {
|
632
|
+
rb_raise(rb_eRuntimeError,
|
633
|
+
"can't calculate interpolation when masked elements exist");
|
634
|
+
}
|
635
|
+
|
636
|
+
if ( cv->elements != sc->elements ) {
|
637
|
+
rb_raise(rb_eRuntimeError, "data num mismatch with scale");
|
638
|
+
}
|
639
|
+
|
640
|
+
cx = ca_wrap_readonly(vx, CA_DOUBLE);
|
641
|
+
|
642
|
+
co0 = carray_new(ca->data_type, cx->rank, cx->dim, 0, NULL);
|
643
|
+
out = out0 = ca_wrap_struct(co0);
|
644
|
+
co = ca_wrap_writable(out, CA_DOUBLE);
|
645
|
+
|
646
|
+
ca_attach_n(4, cv, sc, cx, co);
|
647
|
+
|
648
|
+
px = (double*) cx->ptr;
|
649
|
+
po = (double*) co->ptr;
|
650
|
+
|
651
|
+
ca_update_mask(cx);
|
652
|
+
if ( cx->mask ) {
|
653
|
+
boolean8_t *mx, *mo;
|
654
|
+
ca_create_mask(co);
|
655
|
+
mx = (boolean8_t *) cx->mask->ptr;
|
656
|
+
mo = (boolean8_t *) co->mask->ptr;
|
657
|
+
if ( type == 3 ) {
|
658
|
+
for (i=0; i<cx->elements; i++) {
|
659
|
+
if ( ! *mx ) {
|
660
|
+
*po = interpolate_cubic((double*)sc->ptr, (double*)cv->ptr,
|
661
|
+
cv->elements, *px);
|
662
|
+
}
|
663
|
+
else {
|
664
|
+
*mo = 1;
|
665
|
+
}
|
666
|
+
mx++; mo++; po++; px++;
|
667
|
+
}
|
668
|
+
}
|
669
|
+
else {
|
670
|
+
for (i=0; i<cx->elements; i++) {
|
671
|
+
if ( ! *mx ) {
|
672
|
+
*po = interpolate_linear((double*)sc->ptr, (double*)cv->ptr,
|
673
|
+
cv->elements, *px);
|
674
|
+
}
|
675
|
+
else {
|
676
|
+
*mo = 1;
|
677
|
+
}
|
678
|
+
mx++; mo++; po++; px++;
|
679
|
+
}
|
680
|
+
}
|
681
|
+
}
|
682
|
+
else {
|
683
|
+
if ( type == 3 ) {
|
684
|
+
for (i=0; i<cx->elements; i++) {
|
685
|
+
*po++ = interpolate_cubic((double*)sc->ptr, (double*)cv->ptr,
|
686
|
+
cv->elements, *px++);
|
687
|
+
}
|
688
|
+
}
|
689
|
+
else {
|
690
|
+
for (i=0; i<cx->elements; i++) {
|
691
|
+
*po++ = interpolate_linear((double*)sc->ptr, (double*)cv->ptr,
|
692
|
+
cv->elements, *px++);
|
693
|
+
}
|
694
|
+
}
|
695
|
+
}
|
696
|
+
|
697
|
+
ca_sync(co);
|
698
|
+
ca_detach_n(4, cv, sc, cx, co);
|
699
|
+
|
700
|
+
if ( rb_ca_is_scalar(vx) ) {
|
701
|
+
return rb_funcall(out0, rb_intern("[]"), 1, INT2FIX(0));
|
702
|
+
}
|
703
|
+
else {
|
704
|
+
return out0;
|
705
|
+
}
|
706
|
+
}
|
707
|
+
|
708
|
+
static VALUE
|
709
|
+
rb_ca_differentiate (volatile VALUE self,
|
710
|
+
volatile VALUE vsc, volatile VALUE vx)
|
711
|
+
{
|
712
|
+
volatile VALUE rval = self;
|
713
|
+
volatile VALUE out0, out;
|
714
|
+
CArray *ca, *cv, *sc, *cx, *co0, *co;
|
715
|
+
double *px, *po;
|
716
|
+
int32_t i;
|
717
|
+
|
718
|
+
Data_Get_Struct(self, CArray, ca);
|
719
|
+
|
720
|
+
cv = ca_wrap_readonly(rval, CA_DOUBLE);
|
721
|
+
sc = ca_wrap_readonly(vsc, CA_DOUBLE);
|
722
|
+
|
723
|
+
if ( ca_is_any_masked(cv) || ca_is_any_masked(sc) ) {
|
724
|
+
rb_raise(rb_eRuntimeError,
|
725
|
+
"can't calculate differentiation when masked elements exist");
|
726
|
+
}
|
727
|
+
|
728
|
+
if ( cv->elements != sc->elements ) {
|
729
|
+
rb_raise(rb_eRuntimeError, "data num mismatch with scale");
|
730
|
+
}
|
731
|
+
|
732
|
+
cx = ca_wrap_readonly(vx, CA_DOUBLE);
|
733
|
+
|
734
|
+
co0 = carray_new(ca->data_type, cx->rank, cx->dim, 0, NULL);
|
735
|
+
out = out0 = ca_wrap_struct(co0);
|
736
|
+
co = ca_wrap_writable(out, CA_DOUBLE);
|
737
|
+
|
738
|
+
ca_attach_n(4, cv, sc, cx, co);
|
739
|
+
|
740
|
+
px = (double*) cx->ptr;
|
741
|
+
po = (double*) co->ptr;
|
742
|
+
|
743
|
+
ca_update_mask(cx);
|
744
|
+
if ( cx->mask ) {
|
745
|
+
boolean8_t *mx, *mo;
|
746
|
+
ca_create_mask(co);
|
747
|
+
mx = (boolean8_t *) cx->mask->ptr;
|
748
|
+
mo = (boolean8_t *) co->mask->ptr;
|
749
|
+
for (i=0; i<cx->elements; i++) {
|
750
|
+
if ( ! *mx ) {
|
751
|
+
*po = differentiate((double*)sc->ptr, (double*)ca->ptr,
|
752
|
+
ca->elements, *px);
|
753
|
+
}
|
754
|
+
else {
|
755
|
+
*mo = 1;
|
756
|
+
}
|
757
|
+
mx++; mo++; px++, po++;
|
758
|
+
}
|
759
|
+
}
|
760
|
+
else {
|
761
|
+
for (i=0; i<cx->elements; i++) {
|
762
|
+
*po = differentiate((double*)sc->ptr, (double*)ca->ptr,
|
763
|
+
ca->elements, *px);
|
764
|
+
px++, po++;
|
765
|
+
}
|
766
|
+
}
|
767
|
+
|
768
|
+
ca_sync(co);
|
769
|
+
ca_detach_n(4, cv, sc, cx, co);
|
770
|
+
|
771
|
+
if ( rb_ca_is_scalar(vx) ) {
|
772
|
+
return rb_funcall(out0, rb_intern("[]"), 1, INT2FIX(0));
|
773
|
+
}
|
774
|
+
else {
|
775
|
+
return out0;
|
776
|
+
}
|
777
|
+
}
|
778
|
+
|
779
|
+
void
|
780
|
+
Init_carray_interpolate ();
|
781
|
+
|
782
|
+
void
|
783
|
+
Init_carray_calculus ()
|
784
|
+
{
|
785
|
+
rb_define_method(rb_cCArray, "section",
|
786
|
+
rb_ca_binary_search_linear_index, 1);
|
787
|
+
rb_define_method(rb_cCArray, "integrate", rb_ca_integrate, 1);
|
788
|
+
rb_define_method(rb_cCArray, "interpolate", rb_ca_interpolate, -1);
|
789
|
+
rb_define_method(rb_cCArray, "differentiate", rb_ca_differentiate, 2);
|
790
|
+
|
791
|
+
Init_carray_interpolate();
|
792
|
+
}
|