cancer_pathology_data_sharing_test_kit 0.9.0

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Files changed (48) hide show
  1. checksums.yaml +7 -0
  2. data/LICENSE +201 -0
  3. data/config/presets/demo_report.json +14 -0
  4. data/config/presets/inferno_reference_server_preset.json.erb +39 -0
  5. data/lib/cancer_pathology_data_sharing_test_kit/bundle_parse.rb +53 -0
  6. data/lib/cancer_pathology_data_sharing_test_kit/docs/data_access_suite_description.md +83 -0
  7. data/lib/cancer_pathology_data_sharing_test_kit/docs/report_generation_suite_description.md +118 -0
  8. data/lib/cancer_pathology_data_sharing_test_kit/fhir_resource_navigation.rb +174 -0
  9. data/lib/cancer_pathology_data_sharing_test_kit/group_metadata.rb +82 -0
  10. data/lib/cancer_pathology_data_sharing_test_kit/igs/.keep +0 -0
  11. data/lib/cancer_pathology_data_sharing_test_kit/igs/README.md +21 -0
  12. data/lib/cancer_pathology_data_sharing_test_kit/metadata.rb +75 -0
  13. data/lib/cancer_pathology_data_sharing_test_kit/must_support_test.rb +239 -0
  14. data/lib/cancer_pathology_data_sharing_test_kit/primitive_type.rb +5 -0
  15. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent/data_absent_reason_code_system.rb +22 -0
  16. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent/data_absent_reason_extension.rb +20 -0
  17. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent/sending_hide_missing.rb +28 -0
  18. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent_group.rb +27 -0
  19. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/encounter/encounter_must_support_test.rb +53 -0
  20. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/encounter/encounter_validation_test.rb +48 -0
  21. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/encounter/metadata.yml +281 -0
  22. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/patient/metadata.yml +305 -0
  23. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/patient/patient_must_support_test.rb +58 -0
  24. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/patient/patient_validation_test.rb +47 -0
  25. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/practitioner_role/metadata.yml +44 -0
  26. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/practitioner_role/practitioner_role_must_support_test.rb +45 -0
  27. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/practitioner_role/practitioner_role_validation_test.rb +47 -0
  28. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/service_request/metadata.yml +75 -0
  29. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/service_request/service_request_must_support_test.rb +52 -0
  30. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/service_request/service_request_validation_test.rb +47 -0
  31. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/specimen/metadata.yml +51 -0
  32. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/specimen/specimen_must_support_test.rb +53 -0
  33. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/specimen/specimen_validation_test.rb +47 -0
  34. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_diagnostic_report/diagnostic_report_validation_test.rb +47 -0
  35. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_diagnostic_report/metadata.yml +77 -0
  36. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_diagnostic_report/us_pathology_diagnostic_report_must_support_test.rb +51 -0
  37. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_exchange_bundle/exchange_bundle_validation_test.rb +56 -0
  38. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_exchange_bundle/metadata.yml +78 -0
  39. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_exchange_bundle/us_pathology_exchange_bundle_must_support_test.rb +41 -0
  40. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle_group.rb +104 -0
  41. data/lib/cancer_pathology_data_sharing_test_kit/report_generation_suite.rb +73 -0
  42. data/lib/cancer_pathology_data_sharing_test_kit/urls.rb +25 -0
  43. data/lib/cancer_pathology_data_sharing_test_kit/us_core_data_access_suite/us_core_group.rb +72 -0
  44. data/lib/cancer_pathology_data_sharing_test_kit/us_core_data_access_suite.rb +58 -0
  45. data/lib/cancer_pathology_data_sharing_test_kit/validation_test.rb +96 -0
  46. data/lib/cancer_pathology_data_sharing_test_kit/version.rb +4 -0
  47. data/lib/cancer_pathology_data_sharing_test_kit.rb +3 -0
  48. metadata +124 -0
metadata ADDED
@@ -0,0 +1,124 @@
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+ --- !ruby/object:Gem::Specification
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+ name: cancer_pathology_data_sharing_test_kit
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+ version: !ruby/object:Gem::Version
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+ version: 0.9.0
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+ platform: ruby
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+ authors:
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+ - Robert Passas
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+ - Diego Griese
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+ - Christine Duong
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+ - Karl Naden
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+ autorequire:
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+ bindir: bin
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+ cert_chain: []
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+ date: 2025-05-07 00:00:00.000000000 Z
15
+ dependencies:
16
+ - !ruby/object:Gem::Dependency
17
+ name: inferno_core
18
+ requirement: !ruby/object:Gem::Requirement
19
+ requirements:
20
+ - - "~>"
21
+ - !ruby/object:Gem::Version
22
+ version: 0.6.8
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+ type: :runtime
24
+ prerelease: false
25
+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
27
+ - - "~>"
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+ - !ruby/object:Gem::Version
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+ version: 0.6.8
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+ - !ruby/object:Gem::Dependency
31
+ name: us_core_test_kit
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+ requirement: !ruby/object:Gem::Requirement
33
+ requirements:
34
+ - - "~>"
35
+ - !ruby/object:Gem::Version
36
+ version: 0.11.1
37
+ type: :runtime
38
+ prerelease: false
39
+ version_requirements: !ruby/object:Gem::Requirement
40
+ requirements:
41
+ - - "~>"
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+ - !ruby/object:Gem::Version
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+ version: 0.11.1
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+ description: Inferno test kit for testing systems per the Cancer Pathology Data Sharing
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+ IG
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+ email:
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+ - inferno@groups.mitre.org
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+ executables: []
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+ extensions: []
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+ extra_rdoc_files: []
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+ files:
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+ - LICENSE
53
+ - config/presets/demo_report.json
54
+ - config/presets/inferno_reference_server_preset.json.erb
55
+ - lib/cancer_pathology_data_sharing_test_kit.rb
56
+ - lib/cancer_pathology_data_sharing_test_kit/bundle_parse.rb
57
+ - lib/cancer_pathology_data_sharing_test_kit/docs/data_access_suite_description.md
58
+ - lib/cancer_pathology_data_sharing_test_kit/docs/report_generation_suite_description.md
59
+ - lib/cancer_pathology_data_sharing_test_kit/fhir_resource_navigation.rb
60
+ - lib/cancer_pathology_data_sharing_test_kit/group_metadata.rb
61
+ - lib/cancer_pathology_data_sharing_test_kit/igs/.keep
62
+ - lib/cancer_pathology_data_sharing_test_kit/igs/README.md
63
+ - lib/cancer_pathology_data_sharing_test_kit/metadata.rb
64
+ - lib/cancer_pathology_data_sharing_test_kit/must_support_test.rb
65
+ - lib/cancer_pathology_data_sharing_test_kit/primitive_type.rb
66
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite.rb
67
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent/data_absent_reason_code_system.rb
68
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent/data_absent_reason_extension.rb
69
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent/sending_hide_missing.rb
70
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/data_absent_group.rb
71
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/encounter/encounter_must_support_test.rb
72
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/encounter/encounter_validation_test.rb
73
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/encounter/metadata.yml
74
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/patient/metadata.yml
75
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/patient/patient_must_support_test.rb
76
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/patient/patient_validation_test.rb
77
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/practitioner_role/metadata.yml
78
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/practitioner_role/practitioner_role_must_support_test.rb
79
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/practitioner_role/practitioner_role_validation_test.rb
80
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/service_request/metadata.yml
81
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/service_request/service_request_must_support_test.rb
82
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/service_request/service_request_validation_test.rb
83
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/specimen/metadata.yml
84
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/specimen/specimen_must_support_test.rb
85
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/specimen/specimen_validation_test.rb
86
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_diagnostic_report/diagnostic_report_validation_test.rb
87
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_diagnostic_report/metadata.yml
88
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_diagnostic_report/us_pathology_diagnostic_report_must_support_test.rb
89
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_exchange_bundle/exchange_bundle_validation_test.rb
90
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_exchange_bundle/metadata.yml
91
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle/us_pathology_exchange_bundle/us_pathology_exchange_bundle_must_support_test.rb
92
+ - lib/cancer_pathology_data_sharing_test_kit/report_generation_suite/exchange_bundle_group.rb
93
+ - lib/cancer_pathology_data_sharing_test_kit/urls.rb
94
+ - lib/cancer_pathology_data_sharing_test_kit/us_core_data_access_suite.rb
95
+ - lib/cancer_pathology_data_sharing_test_kit/us_core_data_access_suite/us_core_group.rb
96
+ - lib/cancer_pathology_data_sharing_test_kit/validation_test.rb
97
+ - lib/cancer_pathology_data_sharing_test_kit/version.rb
98
+ homepage: https://github.com/inferno-framework/cancer-pathology-data-sharing-test-kit/
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+ licenses:
100
+ - Apache-2.0
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+ metadata:
102
+ homepage_uri: https://github.com/inferno-framework/cancer-pathology-data-sharing-test-kit/
103
+ source_code_uri: https://github.com/inferno-framework/cancer-pathology-data-sharing-test-kit/
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+ inferno_test_kit: 'true'
105
+ post_install_message:
106
+ rdoc_options: []
107
+ require_paths:
108
+ - lib
109
+ required_ruby_version: !ruby/object:Gem::Requirement
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+ requirements:
111
+ - - ">="
112
+ - !ruby/object:Gem::Version
113
+ version: 3.3.6
114
+ required_rubygems_version: !ruby/object:Gem::Requirement
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+ requirements:
116
+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
119
+ requirements: []
120
+ rubygems_version: 3.5.22
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+ signing_key:
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+ specification_version: 4
123
+ summary: Cancer Pathology Data Sharing IG Test Kit
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+ test_files: []