cagnut_gatk 0.3.0 → 0.3.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA1:
3
- metadata.gz: fe5eb1cd0ec1bce7070824c57593e870b3bcb088
4
- data.tar.gz: 0b74a7f00a8a7ecc9f9a4be0cf3f88a87de2fc57
3
+ metadata.gz: 0e22921215bf8e2c796cce60d9997c129e3da405
4
+ data.tar.gz: 02146822c42bf51b0f001d6cbefe53603d83bf8c
5
5
  SHA512:
6
- metadata.gz: 4a32007bb842e9ee92d779817a4c6730ae3d27b47f012609dc65db54bf0adb09718abbe8da668e6220f7bf0792d7502fa2b5adc94200e08cc93bf1915bf74773
7
- data.tar.gz: f8d03e201a08dc188203a46b8517fa8527e604c1980587ebb5d7bada9f8ca9727dba489cad031b61986268638f9c17c40764bf0470ca312024946bc753cdb26b
6
+ metadata.gz: f8a6ba060d68bd9cdcc714b19e34bc6ac498c2f26be04c1e7dae14d5c85bbfcacc3e6460fc23a62a3313d7d0d4c8fd4d411ce4478d263f410361de25c55fcc63
7
+ data.tar.gz: 4b3258c03b7db660673f5e510002e42c3078727c892886036674b77a486b5a1e9a876bcaf68ec33ce7e0a943232a81a2be6f86332810375a7e07e6c2b29300a0
@@ -27,7 +27,7 @@ module CagnutGatk
27
27
  previous_job_id, filename, order = indel_realigner dirs, order, previous_job_id, filename, interval_list
28
28
  previous_job_id, order = base_recalibrator dirs, order, previous_job_id, filename
29
29
  previous_job_id, filename = print_reads dirs, order, previous_job_id, filename
30
- [previous_job_id, previous_job_id, order+1]
30
+ [previous_job_id, filename, order+1]
31
31
  end
32
32
 
33
33
  def realigner_target_creator dirs, order=1, previous_job_id=nil, filename=nil
@@ -1,3 +1,3 @@
1
1
  module CagnutGatk
2
- VERSION = "0.3.0"
2
+ VERSION = "0.3.1"
3
3
  end
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: cagnut_gatk
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.3.0
4
+ version: 0.3.1
5
5
  platform: ruby
6
6
  authors:
7
7
  - Shi-Gang Wang
@@ -9,7 +9,7 @@ authors:
9
9
  autorequire:
10
10
  bindir: exe
11
11
  cert_chain: []
12
- date: 2016-11-01 00:00:00.000000000 Z
12
+ date: 2016-11-07 00:00:00.000000000 Z
13
13
  dependencies:
14
14
  - !ruby/object:Gem::Dependency
15
15
  name: cagnut_core