cagnut_gatk 0.3.0 → 0.3.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/cagnut_gatk/util.rb +1 -1
- data/lib/cagnut_gatk/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 0e22921215bf8e2c796cce60d9997c129e3da405
|
4
|
+
data.tar.gz: 02146822c42bf51b0f001d6cbefe53603d83bf8c
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: f8a6ba060d68bd9cdcc714b19e34bc6ac498c2f26be04c1e7dae14d5c85bbfcacc3e6460fc23a62a3313d7d0d4c8fd4d411ce4478d263f410361de25c55fcc63
|
7
|
+
data.tar.gz: 4b3258c03b7db660673f5e510002e42c3078727c892886036674b77a486b5a1e9a876bcaf68ec33ce7e0a943232a81a2be6f86332810375a7e07e6c2b29300a0
|
data/lib/cagnut_gatk/util.rb
CHANGED
@@ -27,7 +27,7 @@ module CagnutGatk
|
|
27
27
|
previous_job_id, filename, order = indel_realigner dirs, order, previous_job_id, filename, interval_list
|
28
28
|
previous_job_id, order = base_recalibrator dirs, order, previous_job_id, filename
|
29
29
|
previous_job_id, filename = print_reads dirs, order, previous_job_id, filename
|
30
|
-
[previous_job_id,
|
30
|
+
[previous_job_id, filename, order+1]
|
31
31
|
end
|
32
32
|
|
33
33
|
def realigner_target_creator dirs, order=1, previous_job_id=nil, filename=nil
|
data/lib/cagnut_gatk/version.rb
CHANGED
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: cagnut_gatk
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.3.
|
4
|
+
version: 0.3.1
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Shi-Gang Wang
|
@@ -9,7 +9,7 @@ authors:
|
|
9
9
|
autorequire:
|
10
10
|
bindir: exe
|
11
11
|
cert_chain: []
|
12
|
-
date: 2016-11-
|
12
|
+
date: 2016-11-07 00:00:00.000000000 Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: cagnut_core
|