bundler 2.6.9 → 4.0.11

data/lib/bundler/cli.rb

@@ -11,7 +11,7 @@ module Bundler
 
     AUTO_INSTALL_CMDS = %w[show binstubs outdated exec open console licenses clean].freeze
     PARSEABLE_COMMANDS = %w[check config help exec platform show version].freeze
-    EXTENSIONS = ["c", "rust"].freeze
+    EXTENSIONS = ["c", "rust", "go"].freeze
 
     COMMAND_ALIASES = {
       "check" => "c",
@@ -24,7 +24,7 @@ module Bundler
     }.freeze
 
     def self.start(*)
-      check_deprecated_ext_option(ARGV) if ARGV.include?("--ext")
+      check_invalid_ext_option(ARGV) if ARGV.include?("--ext")
 
       super
     ensure
@@ -59,17 +59,29 @@ module Bundler
     def initialize(*args)
       super
 
+      current_cmd = args.last[:current_command].name
+
       custom_gemfile = options[:gemfile] || Bundler.settings[:gemfile]
       if custom_gemfile && !custom_gemfile.empty?
         Bundler::SharedHelpers.set_env "BUNDLE_GEMFILE", File.expand_path(custom_gemfile)
-        Bundler.reset_settings_and_root!
+        reset_settings = true
+      end
+
+      # lock --lockfile works differently than install --lockfile
+      unless current_cmd == "lock"
+        custom_lockfile = options[:lockfile] || ENV["BUNDLE_LOCKFILE"] || Bundler.settings[:lockfile]
+        if custom_lockfile && !custom_lockfile.empty?
+          Bundler::SharedHelpers.set_env "BUNDLE_LOCKFILE", File.expand_path(custom_lockfile)
+          reset_settings = true
+        end
       end
 
+      Bundler.reset_settings_and_root! if reset_settings
+
       Bundler.auto_switch
 
       Bundler.settings.set_command_option_if_given :retry, options[:retry]
 
-      current_cmd = args.last[:current_command].name
       Bundler.auto_install if AUTO_INSTALL_CMDS.include?(current_cmd)
     rescue UnknownArgumentError => e
       raise InvalidOption, e.message
@@ -77,7 +89,7 @@ module Bundler
       self.options ||= {}
       unprinted_warnings = Bundler.ui.unprinted_warnings
       Bundler.ui = UI::Shell.new(options)
-      Bundler.ui.level = "debug" if options["verbose"]
+      Bundler.ui.level = "debug" if options[:verbose] || Bundler.settings[:verbose]
       unprinted_warnings.each {|w| Bundler.ui.warn(w) }
     end
 
@@ -92,7 +104,7 @@ module Bundler
       primary_commands = ["install", "update", "cache", "exec", "config", "help"]
 
       list = self.class.printable_commands(true)
-      by_name = list.group_by {|name, _message| name.match(/^bundle (\w+)/)[1] }
+      by_name = list.group_by {|name, _message| name.match(/^bundler? (\w+)/)[1] }
       utilities = by_name.keys.sort - primary_commands
       primary_commands.map! {|name| (by_name[name] || raise("no primary command #{name}")).first }
       utilities.map! {|name| by_name[name].first }
@@ -107,7 +119,33 @@ module Bundler
       shell.say
       self.class.send(:class_options_help, shell)
     end
-    default_task(Bundler.feature_flag.default_cli_command)
+
+    desc "install_or_cli_help", "Deprecated alias of install", hide: true
+    def install_or_cli_help
+      Bundler.ui.warn <<~MSG
+        `bundle install_or_cli_help` is a deprecated alias of `bundle install`.
+        It might be called due to the 'default_cli_command' being set to 'install_or_cli_help',
+        if so fix that by running `bundle config set default_cli_command install --global`.
+      MSG
+      invoke_other_command("install")
+    end
+
+    def self.default_command(meth = nil)
+      return super if meth
+
+      unless Bundler.settings[:default_cli_command]
+        Bundler.ui.info <<~MSG
+          In a future version of Bundler, running `bundle` without argument will no longer run `bundle install`.
+          Instead, the `cli_help` command will be displayed. Please use `bundle install` explicitly for scripts like CI/CD.
+          You can use the future behavior now with `bundle config set default_cli_command cli_help --global`,
+          or you can continue to use the current behavior with `bundle config set default_cli_command install --global`.
+          This message will be removed after a default_cli_command value is set.
+
+        MSG
+      end
+
+      Bundler.settings[:default_cli_command] || "install"
+    end
 
     class_option "no-color", type: :boolean, desc: "Disable colorization in output"
     class_option "retry", type: :numeric, aliases: "-r", banner: "NUM",
@@ -117,6 +155,10 @@ module Bundler
     def help(cli = nil)
       cli = self.class.all_aliases[cli] if self.class.all_aliases[cli]
 
+      if Bundler.settings[:plugins] && Bundler::Plugin.command?(cli) && !self.class.all_commands.key?(cli)
+        return Bundler::Plugin.exec_command(cli, ["--help"])
+      end
+
       case cli
       when "gemfile" then command = "gemfile"
       when nil       then command = "bundle"
@@ -130,7 +172,7 @@ module Bundler
 
       if man_pages.include?(command)
         man_page = man_pages[command]
-        if Bundler.which("man") && !man_path.match?(%r{^file:/.+!/META-INF/jruby.home/.+})
+        if Bundler.which("man") && !man_path.match?(%r{^(?:file:/.+!|uri:classloader:)/META-INF/jruby.home/.+})
           Kernel.exec("man", man_page)
         else
           puts File.read("#{man_path}/#{File.basename(man_page)}.ronn")
@@ -143,7 +185,7 @@ module Bundler
     end
 
     def self.handle_no_command_error(command, has_namespace = $thor_runner)
-      if Bundler.feature_flag.plugins? && Bundler::Plugin.command?(command)
+      if Bundler.settings[:plugins] && Bundler::Plugin.command?(command)
         return Bundler::Plugin.exec_command(command, ARGV[1..-1])
       end
 
@@ -173,7 +215,7 @@ module Bundler
     D
     method_option "dry-run", type: :boolean, default: false, banner: "Lock the Gemfile"
     method_option "gemfile", type: :string, banner: "Use the specified gemfile instead of Gemfile"
-    method_option "path", type: :string, banner: "Specify a different path than the system default ($BUNDLE_PATH or $GEM_HOME).#{" Bundler will remember this value for future installs on this machine" unless Bundler.feature_flag.forget_cli_options?}"
+    method_option "path", type: :string, banner: "Specify a different path than the system default, namely, $BUNDLE_PATH or $GEM_HOME (removed)"
     def check
       remembered_flag_deprecation("path")
 
@@ -187,12 +229,11 @@ module Bundler
     long_desc <<-D
       Removes the given gems from the Gemfile while ensuring that the resulting Gemfile is still valid. If the gem is not found, Bundler prints a error message and if gem could not be removed due to any reason Bundler will display a warning.
     D
-    method_option "install", type: :boolean, banner: "Runs 'bundle install' after removing the gems from the Gemfile"
+    method_option "install", type: :boolean, banner: "Runs 'bundle install' after removing the gems from the Gemfile (removed)"
     def remove(*gems)
       if ARGV.include?("--install")
-        message = "The `--install` flag has been deprecated. `bundle install` is triggered by default."
         removed_message = "The `--install` flag has been removed. `bundle install` is triggered by default."
-        SharedHelpers.major_deprecation(2, message, removed_message: removed_message)
+        raise InvalidOption, removed_message
       end
 
       require_relative "cli/remove"
@@ -210,42 +251,52 @@ module Bundler
 
       If the bundle has already been installed, bundler will tell you so and then exit.
     D
-    method_option "binstubs", type: :string, lazy_default: "bin", banner: "Generate bin stubs for bundled gems to ./bin"
-    method_option "clean", type: :boolean, banner: "Run bundle clean automatically after install"
-    method_option "deployment", type: :boolean, banner: "Install using defaults tuned for deployment environments"
-    method_option "frozen", type: :boolean, banner: "Do not allow the Gemfile.lock to be updated after this install"
+    method_option "binstubs", type: :string, lazy_default: "bin", banner: "Generate bin stubs for bundled gems to ./bin (removed)"
+    method_option "clean", type: :boolean, banner: "Run bundle clean automatically after install (removed)"
+    method_option "deployment", type: :boolean, banner: "Install using defaults tuned for deployment environments (removed)"
+    method_option "frozen", type: :boolean, banner: "Do not allow the Gemfile.lock to be updated after this install (removed)"
     method_option "full-index", type: :boolean, banner: "Fall back to using the single-file index of all gems"
     method_option "gemfile", type: :string, banner: "Use the specified gemfile instead of Gemfile"
     method_option "jobs", aliases: "-j", type: :numeric, banner: "Specify the number of jobs to run in parallel"
     method_option "local", type: :boolean, banner: "Do not attempt to fetch gems remotely and use the gem cache instead"
+    method_option "lockfile", type: :string, banner: "Use the specified lockfile instead of the default."
     method_option "prefer-local", type: :boolean, banner: "Only attempt to fetch gems remotely if not present locally, even if newer versions are available remotely"
     method_option "no-cache", type: :boolean, banner: "Don't update the existing gem cache."
-    method_option "redownload", type: :boolean, aliases: "--force", banner: "Force downloading every gem."
-    method_option "no-prune", type: :boolean, banner: "Don't remove stale gems from the cache."
-    method_option "path", type: :string, banner: "Specify a different path than the system default ($BUNDLE_PATH or $GEM_HOME).#{" Bundler will remember this value for future installs on this machine" unless Bundler.feature_flag.forget_cli_options?}"
+    method_option "no-lock", type: :boolean, banner: "Don't create a lockfile."
+    method_option "force", type: :boolean, aliases: "--redownload", banner: "Force reinstalling every gem, even if already installed"
+    method_option "no-prune", type: :boolean, banner: "Don't remove stale gems from the cache (removed)."
+    method_option "path", type: :string, banner: "Specify a different path than the system default, namely, $BUNDLE_PATH or $GEM_HOME (removed)."
     method_option "quiet", type: :boolean, banner: "Only output warnings and errors."
-    method_option "shebang", type: :string, banner: "Specify a different shebang executable name than the default (usually 'ruby')"
+    method_option "shebang", type: :string, banner: "Specify a different shebang executable name than the default, usually 'ruby' (removed)"
     method_option "standalone", type: :array, lazy_default: [], banner: "Make a bundle that can work without the Bundler runtime"
-    method_option "system", type: :boolean, banner: "Install to the system location ($BUNDLE_PATH or $GEM_HOME) even if the bundle was previously installed somewhere else for this application"
+    method_option "system", type: :boolean, banner: "Install to the system location ($BUNDLE_PATH or $GEM_HOME) even if the bundle was previously installed somewhere else for this application (removed)"
     method_option "trust-policy", alias: "P", type: :string, banner: "Gem trust policy (like gem install -P). Must be one of #{Bundler.rubygems.security_policy_keys.join("|")}"
     method_option "target-rbconfig", type: :string, banner: "Path to rbconfig.rb for the deployment target platform"
-    method_option "without", type: :array, banner: "Exclude gems that are part of the specified named group."
-    method_option "with", type: :array, banner: "Include gems that are part of the specified named group."
+    method_option "without", type: :array, banner: "Exclude gems that are part of the specified named group (removed)."
+    method_option "with", type: :array, banner: "Include gems that are part of the specified named group (removed)."
     def install
-      SharedHelpers.major_deprecation(2, "The `--force` option has been renamed to `--redownload`") if ARGV.include?("--force")
-
       %w[clean deployment frozen no-prune path shebang without with].each do |option|
         remembered_flag_deprecation(option)
       end
 
       print_remembered_flag_deprecation("--system", "path.system", "true") if ARGV.include?("--system")
 
-      remembered_negative_flag_deprecation("no-deployment")
+      remembered_flag_deprecation("deployment", negative: true)
+
+      if ARGV.include?("--binstubs")
+        removed_message = "The --binstubs option has been removed in favor of `bundle binstubs --all`"
+        raise InvalidOption, removed_message
+      end
 
       require_relative "cli/install"
+      options = self.options.dup
+      options["lockfile"] ||= ENV["BUNDLE_LOCKFILE"]
       Bundler.settings.temporary(no_install: false) do
-        Install.new(options.dup).run
+        Install.new(options).run
       end
+    rescue GemfileNotFound => error
+      invoke_other_command("cli_help")
+      raise error # re-raise to show the error and get a failing exit status
     end
 
     map aliases_for("install")
@@ -263,7 +314,7 @@ module Bundler
     method_option "local", type: :boolean, banner: "Do not attempt to fetch gems remotely and use the gem cache instead"
     method_option "quiet", type: :boolean, banner: "Only output warnings and errors."
     method_option "source", type: :array, banner: "Update a specific source (and all gems associated with it)"
-    method_option "redownload", type: :boolean, aliases: "--force", banner: "Force downloading every gem."
+    method_option "force", type: :boolean, aliases: "--redownload", banner: "Force reinstalling every gem, even if already installed"
     method_option "ruby", type: :boolean, banner: "Update ruby specified in Gemfile.lock"
     method_option "bundler", type: :string, lazy_default: "> 0.a", banner: "Update the locked version of bundler"
     method_option "patch", type: :boolean, banner: "Prefer updating only to next patch version"
@@ -274,7 +325,6 @@ module Bundler
     method_option "conservative", type: :boolean, banner: "Use bundle install conservative update behavior and do not allow shared dependencies to be updated."
     method_option "all", type: :boolean, banner: "Update everything."
     def update(*gems)
-      SharedHelpers.major_deprecation(2, "The `--force` option has been renamed to `--redownload`") if ARGV.include?("--force")
       require_relative "cli/update"
       Bundler.settings.temporary(no_install: false) do
         Update.new(options, gems).run
@@ -287,12 +337,11 @@ module Bundler
       Calling show with [GEM] will list the exact location of that gem on your machine.
     D
     method_option "paths", type: :boolean, banner: "List the paths of all gems that are required by your Gemfile."
-    method_option "outdated", type: :boolean, banner: "Show verbose output including whether gems are outdated."
+    method_option "outdated", type: :boolean, banner: "Show verbose output including whether gems are outdated (removed)."
     def show(gem_name = nil)
       if ARGV.include?("--outdated")
-        message = "the `--outdated` flag to `bundle show` was undocumented and will be removed without replacement"
-        removed_message = "the `--outdated` flag to `bundle show` was undocumented and has been removed without replacement"
-        SharedHelpers.major_deprecation(2, message, removed_message: removed_message)
+        removed_message = "the `--outdated` flag to `bundle show` has been removed in favor of `bundle show --verbose`"
+        raise InvalidOption, removed_message
       end
       require_relative "cli/show"
       Show.new(options, gem_name).run
@@ -302,6 +351,7 @@ module Bundler
     method_option "name-only", type: :boolean, banner: "print only the gem names"
     method_option "only-group", type: :array, default: [], banner: "print gems from a given set of groups"
     method_option "without-group", type: :array, default: [], banner: "print all gems except from a given set of groups"
+    method_option "format", type: :string, banner: "format output ('json' is the only supported format)"
     method_option "paths", type: :boolean, banner: "print the path to each gem in the bundle"
     def list
       require_relative "cli/list"
@@ -325,12 +375,14 @@ module Bundler
       will create binstubs for all given gems.
     D
     method_option "force", type: :boolean, default: false, banner: "Overwrite existing binstubs if they exist"
-    method_option "path", type: :string, lazy_default: "bin", banner: "Binstub destination directory (default bin)"
+    method_option "path", type: :string, lazy_default: "bin", banner: "Binstub destination directory, `bin` by default (removed)"
     method_option "shebang", type: :string, banner: "Specify a different shebang executable name than the default (usually 'ruby')"
     method_option "standalone", type: :boolean, banner: "Make binstubs that can work without the Bundler runtime"
     method_option "all", type: :boolean, banner: "Install binstubs for all gems"
     method_option "all-platforms", type: :boolean, default: false, banner: "Install binstubs for all platforms"
     def binstubs(*gems)
+      remembered_flag_deprecation("path", option_name: "bin")
+
       require_relative "cli/binstubs"
       Binstubs.new(options, gems).run
     end
@@ -396,15 +448,15 @@ module Bundler
     end
 
     desc "cache [OPTIONS]", "Locks and then caches all of the gems into vendor/cache"
-    method_option "all", type: :boolean, default: Bundler.feature_flag.cache_all?, banner: "Include all sources (including path and git)."
+    method_option "all", type: :boolean, default: Bundler.settings[:cache_all], banner: "Include all sources (including path and git) (removed)."
     method_option "all-platforms", type: :boolean, banner: "Include gems for all platforms present in the lockfile, not only the current one"
     method_option "cache-path", type: :string, banner: "Specify a different cache path than the default (vendor/cache)."
     method_option "gemfile", type: :string, banner: "Use the specified gemfile instead of Gemfile"
     method_option "no-install", type: :boolean, banner: "Don't install the gems, only update the cache."
-    method_option "no-prune", type: :boolean, banner: "Don't remove stale gems from the cache."
-    method_option "path", type: :string, banner: "Specify a different path than the system default ($BUNDLE_PATH or $GEM_HOME).#{" Bundler will remember this value for future installs on this machine" unless Bundler.feature_flag.forget_cli_options?}"
+    method_option "no-prune", type: :boolean, banner: "Don't remove stale gems from the cache (removed)."
+    method_option "path", type: :string, banner: "Specify a different path than the system default, namely, $BUNDLE_PATH or $GEM_HOME (removed)."
     method_option "quiet", type: :boolean, banner: "Only output warnings and errors."
-    method_option "frozen", type: :boolean, banner: "Do not allow the Gemfile.lock to be updated after this bundle cache operation's install"
+    method_option "frozen", type: :boolean, banner: "Do not allow the Gemfile.lock to be updated after this bundle cache operation's install (removed)"
     long_desc <<-D
       The cache command will copy the .gem files for every gem in the bundle into the
       directory ./vendor/cache. If you then check that directory into your source
@@ -413,18 +465,19 @@ module Bundler
     D
     def cache
       print_remembered_flag_deprecation("--all", "cache_all", "true") if ARGV.include?("--all")
+      print_remembered_flag_deprecation("--no-all", "cache_all", "false") if ARGV.include?("--no-all")
 
-      if ARGV.include?("--path")
-        message =
-          "The `--path` flag is deprecated because its semantics are unclear. " \
-          "Use `bundle config cache_path` to configure the path of your cache of gems, " \
-          "and `bundle config path` to configure the path where your gems are installed, " \
-          "and stop using this flag"
+      %w[frozen no-prune].each do |option|
+        remembered_flag_deprecation(option)
+      end
+
+      if flag_passed?("--path")
         removed_message =
           "The `--path` flag has been removed because its semantics were unclear. " \
           "Use `bundle config cache_path` to configure the path of your cache of gems, " \
-          "and `bundle config path` to configure the path where your gems are installed."
-        SharedHelpers.major_deprecation 2, message, removed_message: removed_message
+          "and `bundle config path` to configure the path where your gems are installed, " \
+          "and stop using this flag"
+        raise InvalidOption, removed_message
       end
 
       require_relative "cli/cache"
@@ -434,7 +487,7 @@ module Bundler
     map aliases_for("cache")
 
     desc "exec [OPTIONS]", "Run the command in context of the bundle"
-    method_option :keep_file_descriptors, type: :boolean, default: true, banner: "Passes all file descriptors to the new processes. Default is true, and setting it to false is deprecated"
+    method_option :keep_file_descriptors, type: :boolean, default: true, banner: "Passes all file descriptors to the new processes. Default is true, and setting it to false is not permitted (removed)."
     method_option :gemfile, type: :string, required: false, banner: "Use the specified gemfile instead of Gemfile"
     long_desc <<-D
       Exec runs a command, providing it access to the gems in the bundle. While using
@@ -443,9 +496,8 @@ module Bundler
     D
     def exec(*args)
       if ARGV.include?("--no-keep-file-descriptors")
-        message = "The `--no-keep-file-descriptors` has been deprecated. `bundle exec` no longer mess with your file descriptors. Close them in the exec'd script if you need to"
         removed_message = "The `--no-keep-file-descriptors` has been removed. `bundle exec` no longer mess with your file descriptors. Close them in the exec'd script if you need to"
-        SharedHelpers.major_deprecation(2, message, removed_message: removed_message)
+        raise InvalidOption, removed_message
       end
 
       require_relative "cli/exec"
@@ -486,13 +538,13 @@ module Bundler
     def version
       cli_help = current_command.name == "cli_help"
       if cli_help || ARGV.include?("version")
-        build_info = " (#{BuildMetadata.built_at} commit #{BuildMetadata.git_commit_sha})"
+        build_info = " (#{BuildMetadata.timestamp} commit #{BuildMetadata.git_commit_sha})"
       end
 
-      if !cli_help && Bundler.feature_flag.print_only_version_number?
-        Bundler.ui.info "#{Bundler::VERSION}#{build_info}"
+      if !cli_help
+        Bundler.ui.info "#{Bundler.verbose_version}#{build_info}"
       else
-        Bundler.ui.info "Bundler version #{Bundler::VERSION}#{build_info}"
+        Bundler.ui.info "Bundler version #{Bundler.verbose_version}#{build_info}"
       end
     end
 
@@ -512,41 +564,32 @@ module Bundler
       end
     end
 
-    unless Bundler.feature_flag.bundler_3_mode?
-      desc "viz [OPTIONS]", "Generates a visual dependency graph", hide: true
-      long_desc <<-D
-        Viz generates a PNG file of the current Gemfile as a dependency graph.
-        Viz requires the ruby-graphviz gem (and its dependencies).
-        The associated gems must also be installed via 'bundle install'.
-      D
-      method_option :file, type: :string, default: "gem_graph", aliases: "-f", desc: "The name to use for the generated file. see format option"
-      method_option :format, type: :string, default: "png", aliases: "-F", desc: "This is output format option. Supported format is png, jpg, svg, dot ..."
-      method_option :requirements, type: :boolean, default: false, aliases: "-R", desc: "Set to show the version of each required dependency."
-      method_option :version, type: :boolean, default: false, aliases: "-v", desc: "Set to show each gem version."
-      method_option :without, type: :array, default: [], aliases: "-W", banner: "GROUP[ GROUP...]", desc: "Exclude gems that are part of the specified named group."
-      def viz
-        SharedHelpers.major_deprecation 2, "The `viz` command has been renamed to `graph` and moved to a plugin. See https://github.com/rubygems/bundler-graph"
-        require_relative "cli/viz"
-        Viz.new(options.dup).run
-      end
+    desc "viz [OPTIONS]", "Generates a visual dependency graph", hide: true
+    def viz
+      SharedHelpers.feature_removed! "The `viz` command has been renamed to `graph` and moved to a plugin. See https://github.com/rubygems/bundler-graph"
     end
 
     desc "gem NAME [OPTIONS]", "Creates a skeleton for creating a rubygem"
-    method_option :exe, type: :boolean, default: false, aliases: ["--bin", "-b"], desc: "Generate a binary executable for your library."
-    method_option :coc, type: :boolean, desc: "Generate a code of conduct file. Set a default with `bundle config set --global gem.coc true`."
-    method_option :edit, type: :string, aliases: "-e", required: false, banner: "EDITOR", lazy_default: [ENV["BUNDLER_EDITOR"], ENV["VISUAL"], ENV["EDITOR"]].find {|e| !e.nil? && !e.empty? }, desc: "Open generated gemspec in the specified editor (defaults to $EDITOR or $BUNDLER_EDITOR)"
-    method_option :ext, type: :string, desc: "Generate the boilerplate for C extension code.", enum: EXTENSIONS
-    method_option :git, type: :boolean, default: true, desc: "Initialize a git repo inside your library."
-    method_option :mit, type: :boolean, desc: "Generate an MIT license file. Set a default with `bundle config set --global gem.mit true`."
-    method_option :rubocop, type: :boolean, desc: "Add rubocop to the generated Rakefile and gemspec. Set a default with `bundle config set --global gem.rubocop true`."
-    method_option :changelog, type: :boolean, desc: "Generate changelog file. Set a default with `bundle config set --global gem.changelog true`."
+    method_option :exe, type: :boolean, default: false, aliases: ["--bin", "-b"], banner: "Generate a binary executable for your library."
+    method_option :coc, type: :boolean, banner: "Generate a code of conduct file. Set a default with `bundle config set --global gem.coc true`."
+    method_option :edit, type: :string, aliases: "-e", required: false, lazy_default: [ENV["BUNDLER_EDITOR"], ENV["VISUAL"], ENV["EDITOR"]].find {|e| !e.nil? && !e.empty? }, banner: "Open generated gemspec in the specified editor (defaults to $EDITOR or $BUNDLER_EDITOR)"
+    method_option :ext, type: :string, banner: "Generate the boilerplate for C extension code.", enum: EXTENSIONS
+    method_option :git, type: :boolean, default: true, banner: "Initialize a git repo inside your library."
+    method_option :mit, type: :boolean, banner: "Generate an MIT license file. Set a default with `bundle config set --global gem.mit true`."
+    method_option :rubocop, type: :boolean, banner: "Add rubocop to the generated Rakefile and gemspec. Set a default with `bundle config set --global gem.rubocop true` (removed)."
+    method_option :changelog, type: :boolean, banner: "Generate changelog file. Set a default with `bundle config set --global gem.changelog true`."
     method_option :test, type: :string, lazy_default: Bundler.settings["gem.test"] || "", aliases: "-t", banner: "Use the specified test framework for your library", enum: %w[rspec minitest test-unit], desc: "Generate a test directory for your library, either rspec, minitest or test-unit. Set a default with `bundle config set --global gem.test (rspec|minitest|test-unit)`."
-    method_option :ci, type: :string, lazy_default: Bundler.settings["gem.ci"] || "", enum: %w[github gitlab circle], desc: "Generate CI configuration, either GitHub Actions, GitLab CI or CircleCI. Set a default with `bundle config set --global gem.ci (github|gitlab|circle)`"
-    method_option :linter, type: :string, lazy_default: Bundler.settings["gem.linter"] || "", enum: %w[rubocop standard], desc: "Add a linter and code formatter, either RuboCop or Standard. Set a default with `bundle config set --global gem.linter (rubocop|standard)`"
+    method_option :ci, type: :string, lazy_default: Bundler.settings["gem.ci"] || "", enum: %w[github gitlab circle], banner: "Generate CI configuration, either GitHub Actions, GitLab CI or CircleCI. Set a default with `bundle config set --global gem.ci (github|gitlab|circle)`"
+    method_option :linter, type: :string, lazy_default: Bundler.settings["gem.linter"] || "", enum: %w[rubocop standard], banner: "Add a linter and code formatter, either RuboCop or Standard. Set a default with `bundle config set --global gem.linter (rubocop|standard)`"
     method_option :github_username, type: :string, default: Bundler.settings["gem.github_username"], banner: "Set your username on GitHub", desc: "Fill in GitHub username on README so that you don't have to do it manually. Set a default with `bundle config set --global gem.github_username <your_username>`."
+    method_option :bundle, type: :boolean, default: Bundler.settings["gem.bundle"], banner: "Automatically run `bundle install` after creation. Set a default with `bundle config set --global gem.bundle true`"
 
     def gem(name)
       require_relative "cli/gem"
+
+      raise InvalidOption, "--rubocop has been removed, use --linter=rubocop" if ARGV.include?("--rubocop")
+      raise InvalidOption, "--no-rubocop has been removed, use --no-linter" if ARGV.include?("--no-rubocop")
+
       cmd_args = args + [self]
       cmd_args.unshift(options)
 
@@ -557,7 +600,7 @@ module Bundler
       File.expand_path("templates", __dir__)
     end
 
-    desc "clean [OPTIONS]", "Cleans up unused gems in your bundler directory", hide: true
+    desc "clean [OPTIONS]", "Cleans up unused gems in your bundler directory"
     method_option "dry-run", type: :boolean, default: false, banner: "Only print out changes, do not clean gems"
     method_option "force", type: :boolean, default: false, banner: "Forces cleaning up unused gems even if Bundler is configured to use globally installed gems. As a consequence, removes all system gems except for the ones in the current application."
     def clean
@@ -573,12 +616,8 @@ module Bundler
     end
 
     desc "inject GEM VERSION", "Add the named gem, with version requirements, to the resolved Gemfile", hide: true
-    method_option "source", type: :string, banner: "Install gem from the given source"
-    method_option "group", type: :string, banner: "Install gem into a bundler group"
-    def inject(name, version)
-      SharedHelpers.major_deprecation 2, "The `inject` command has been replaced by the `add` command"
-      require_relative "cli/inject"
-      Inject.new(options.dup, name, version).run
+    def inject(*)
+      SharedHelpers.feature_removed! "The `inject` command has been replaced by the `add` command"
     end
 
     desc "lock", "Creates a lockfile without installing"
@@ -632,7 +671,7 @@ module Bundler
       end
     end
 
-    if Bundler.feature_flag.plugins?
+    if Bundler.settings[:plugins]
       require_relative "cli/plugin"
       desc "plugin", "Manage the bundler plugins"
       subcommand "plugin", Plugin
@@ -666,18 +705,15 @@ module Bundler
       end
     end
 
-    def self.check_deprecated_ext_option(arguments)
-      # when deprecated version of `--ext` is called
-      # print out deprecation warning and pretend `--ext=c` was provided
-      if deprecated_ext_value?(arguments)
-        message = "Extensions can now be generated using C or Rust, so `--ext` with no arguments has been deprecated. Please select a language, e.g. `--ext=rust` to generate a Rust extension. This gem will now be generated as if `--ext=c` was used."
+    def self.check_invalid_ext_option(arguments)
+      # when invalid version of `--ext` is called
+      if invalid_ext_value?(arguments)
         removed_message = "Extensions can now be generated using C or Rust, so `--ext` with no arguments has been removed. Please select a language, e.g. `--ext=rust` to generate a Rust extension."
-        SharedHelpers.major_deprecation 2, message, removed_message: removed_message
-        arguments[arguments.index("--ext")] = "--ext=c"
+        raise InvalidOption, removed_message
       end
     end
 
-    def self.deprecated_ext_value?(arguments)
+    def self.invalid_ext_value?(arguments)
       index = arguments.index("--ext")
       next_argument = arguments[index + 1]
 
@@ -685,15 +721,15 @@ module Bundler
       # for example `bundle gem hello --ext c`
       return false if EXTENSIONS.include?(next_argument)
 
-      # deprecated call when --ext is called with no value in last position
+      # invalid call when --ext is called with no value in last position
       # for example `bundle gem hello_gem --ext`
       return true if next_argument.nil?
 
-      # deprecated call when --ext is followed by other parameter
+      # invalid call when --ext is followed by other parameter
       # for example `bundle gem --ext --no-ci hello_gem`
       return true if next_argument.start_with?("-")
 
-      # deprecated call when --ext is followed by gem name
+      # invalid call when --ext is followed by gem name
       # for example `bundle gem --ext hello_gem`
       return true if next_argument
 
@@ -707,6 +743,19 @@ module Bundler
       config[:current_command]
     end
 
+    def invoke_other_command(name)
+      _, _, config = @_initializer
+      original_command = config[:current_command]
+      command = self.class.all_commands[name]
+      config[:current_command] = command
+      send(name)
+    ensure
+      config[:current_command] = original_command
+    end
+
+    def current_command=(command)
+    end
+
     def print_command
       return unless Bundler.ui.debug?
       cmd = current_command
@@ -720,7 +769,7 @@ module Bundler
       end
       command << Thor::Options.to_switches(options_to_print.sort_by(&:first)).strip
       command.reject!(&:empty?)
-      Bundler.ui.info "Running `#{command * " "}` with bundler #{Bundler::VERSION}"
+      Bundler.ui.info "Running `#{command * " "}` with bundler #{Bundler.verbose_version}"
     end
 
     def warn_on_outdated_bundler
@@ -747,44 +796,30 @@ module Bundler
       nil
     end
 
-    def remembered_negative_flag_deprecation(name)
-      positive_name = name.gsub(/\Ano-/, "")
-      option = current_command.options[positive_name]
-      flag_name = "--no-" + option.switch_name.gsub(/\A--/, "")
-
-      flag_deprecation(positive_name, flag_name, option)
-    end
-
-    def remembered_flag_deprecation(name)
+    def remembered_flag_deprecation(name, negative: false, option_name: nil)
       option = current_command.options[name]
       flag_name = option.switch_name
-
-      flag_deprecation(name, flag_name, option)
-    end
-
-    def flag_deprecation(name, flag_name, option)
-      name_index = ARGV.find {|arg| flag_name == arg.split("=")[0] }
-      return unless name_index
+      flag_name = "--no-" + flag_name.gsub(/\A--/, "") if negative
+      return unless flag_passed?(flag_name)
 
       value = options[name]
       value = value.join(" ").to_s if option.type == :array
       value = "'#{value}'" unless option.type == :boolean
 
-      print_remembered_flag_deprecation(flag_name, name.tr("-", "_"), value)
+      print_remembered_flag_deprecation(flag_name, option_name || name.tr("-", "_"), value)
     end
 
     def print_remembered_flag_deprecation(flag_name, option_name, option_value)
-      message =
-        "The `#{flag_name}` flag is deprecated because it relies on being " \
-        "remembered across bundler invocations, which bundler will no longer " \
-        "do in future versions. Instead please use `bundle config set #{option_name} " \
-        "#{option_value}`, and stop using this flag"
       removed_message =
         "The `#{flag_name}` flag has been removed because it relied on being " \
-        "remembered across bundler invocations, which bundler will no longer " \
-        "do. Instead please use `bundle config set #{option_name} " \
-        "#{option_value}`, and stop using this flag"
-      Bundler::SharedHelpers.major_deprecation 2, message, removed_message: removed_message
+        "remembered across bundler invocations, which bundler no longer does. " \
+        "Instead please use `bundle config set #{option_name} #{option_value}`, " \
+        "and stop using this flag"
+      raise InvalidOption, removed_message
+    end
+
+    def flag_passed?(name)
+      ARGV.any? {|arg| name == arg.split("=")[0] }
     end
   end
 end

data/lib/bundler/compact_index_client.rb

@@ -1,6 +1,5 @@
 # frozen_string_literal: true
 
-require "pathname"
 require "set"
 
 module Bundler
@@ -28,11 +27,7 @@ module Bundler
   # It may be called concurrently without global interpreter lock in some Rubies.
   # As a result, some methods may look more complex than necessary to save memory or time.
   class CompactIndexClient
-    # NOTE: MD5 is here not because we expect a server to respond with it, but
-    # because we use it to generate the etag on first request during the upgrade
-    # to the compact index client that uses opaque etags saved to files.
-    # Remove once 2.5.0 has been out for a while.
-    SUPPORTED_DIGESTS = { "sha-256" => :SHA256, "md5" => :MD5 }.freeze
+    SUPPORTED_DIGESTS = { "sha-256" => :SHA256 }.freeze
     DEBUG_MUTEX = Thread::Mutex.new
 
     # info returns an Array of INFO Arrays. Each INFO Array has the following indices: