bulk_data_test_kit 0.9.3 → 0.10.0

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
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-  data.tar.gz: a24bc766bda6c86ab463a63df4f3554d94c91f76897cd24c455cb72c0974d0b4
+  metadata.gz: 2bfb916cc050c63ebe26930f4dfb6ac113cf67235914b91434e44ef72ad6cb17
+  data.tar.gz: 6c0f7b6aec477e345b3f31050ce39b25aea5b1b069dff66166595f5aab834136
 SHA512:
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+  data.tar.gz: 7e300733bea3d4bb601f5c30f25bca7032d80869689191878dfb3931737fa7701e648cf9d700218e71613ee175aa5a0557f8ff0a5cb91538e02077b0811a5de0

data/lib/bulk_data_test_kit/export_cancel_tests.rb

@@ -15,7 +15,10 @@ module BulkDataTestKit
     def perform_export_cancel_test
       use_token = !bearer_token.blank?
       url = bulk_export_url.dup
-      url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      if resource_type == 'Group'
+        skip_if group_id.blank?, 'Group id is blank, skipping test.'
+        url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      end
 
       perform_export_kick_off_request(use_token:, url:)
       assert_response_status(202)

data/lib/bulk_data_test_kit/export_operation_tests.rb

@@ -64,7 +64,10 @@ module BulkDataTestKit
       skip_if bearer_token.blank?, 'Bearer token is not set and thus not required to connect to server.'
 
       url = bulk_export_url.dup
-      url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      if resource_type == 'Group'
+        skip_if group_id.blank?, 'Group id is blank, skipping test.'
+        url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      end
 
       perform_export_kick_off_request(use_token: false, url:)
       assert_response_status([400, 401])
@@ -74,7 +77,10 @@ module BulkDataTestKit
       use_token = !bearer_token.blank?
 
       url = bulk_export_url.dup
-      url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      if resource_type == 'Group'
+        skip_if group_id.blank?, 'Group id is blank, skipping test.'
+        url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      end
 
       perform_export_kick_off_request(use_token:, url:)
       assert_response_status(202)

data/lib/bulk_data_test_kit/export_parameters_tests.rb

@@ -14,7 +14,10 @@ module BulkDataTestKit
 
     def perform_outputFormat_param_test
       url = bulk_export_url.dup
-      url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      if resource_type == 'Group'
+        skip_if group_id.blank?, 'Group id is blank, skipping test.'
+        url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      end
 
       ['application/fhir+ndjson', 'application/ndjson', 'ndjson'].each do |format|
         kickoff_url = url.dup
@@ -34,7 +37,10 @@ module BulkDataTestKit
       /x
 
       url = bulk_export_url.dup
-      url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      if resource_type == 'Group'
+        skip_if group_id.blank?, 'Group id is blank, skipping test.'
+        url = bulk_export_url.gsub('[group_id]', group_id) if resource_type == 'Group'
+      end
 
       assert since_timestamp_param.match?(fhir_instant_regex),
              "The provided `_since` timestamp `#{since_timestamp_param}` is not a valid " \

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_export_cancel_test.rb

@@ -17,6 +17,8 @@ module BulkDataTestKit
       DESCRIPTION
       # link 'http://hl7.org/fhir/uv/bulkdata/STU1.0.1/export/index.html#bulk-data-delete-request'
 
+      input :bearer_token,
+            optional: true
       output :cancelled_polling_url
 
       def self.properties

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_export_kick_off_test.rb

@@ -19,6 +19,8 @@ module BulkDataTestKit
       DESCRIPTION
       # link 'http://hl7.org/fhir/uv/bulkdata/STU1.0.1/export/index.html#response---success'
 
+      input :bearer_token,
+            optional: true
       output :polling_url
 
       def self.properties

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_export_tests_test_group.rb

@@ -10,6 +10,8 @@ module BulkDataTestKit
       id :bulk_data_export_tests_v101
       title 'Bulk Data Export Tests'
 
+      input :bulk_server_url
+
       group do
         id :bulk_data_server_tests
         title 'Bulk Data Server TLS Tests'

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_group_export_cancel_test.rb

@@ -0,0 +1,16 @@
+# frozen_string_literal: true
+
+require_relative 'bulk_data_export_cancel_test'
+
+module BulkDataTestKit
+  module BulkDataV101
+    class BulkDataGroupExportCancelTest < BulkDataV101::BulkDataExportCancelTest
+      id :bulk_data_export_group_cancel
+      input :group_id
+
+      config(
+        options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
+      )
+    end
+  end
+end

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_group_export_kick_off_test.rb

@@ -0,0 +1,16 @@
+# frozen_string_literal: true
+
+require_relative 'bulk_data_export_kick_off_test'
+
+module BulkDataTestKit
+  module BulkDataV101
+    class BulkDataGroupKickOffTest < BulkDataV101::BulkDataKickOffTest
+      id :bulk_data_group_kick_off
+      input :group_id
+
+      config(
+        options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
+      )
+    end
+  end
+end

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_group_no_auth_test.rb

@@ -0,0 +1,16 @@
+# frozen_string_literal: true
+
+require_relative 'bulk_data_no_auth_test'
+
+module BulkDataTestKit
+  module BulkDataV101
+    class BulkDataGroupExportNoAuthRejectTest < BulkDataV101::BulkDataExportNoAuthRejectTest
+      id :bulk_data_group_no_auth_reject
+      input :group_id
+
+      config(
+        options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
+      )
+    end
+  end
+end

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_ndjson_download_test.rb

@@ -23,6 +23,8 @@ module BulkDataTestKit
 
       input :bulk_download_url
       input :requires_access_token
+      input :bearer_token,
+            optional: true
 
       run do
         ndjson_download_requiresAccessToken_check(bulk_data_download_url: bulk_download_url,

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_no_auth_test.rb

@@ -20,6 +20,9 @@ module BulkDataTestKit
       DESCRIPTION
       # link 'http://hl7.org/fhir/uv/bulkdata/STU1.0.1/export/index.html#bulk-data-kick-off-request'
 
+      input :bearer_token,
+          optional: true
+
       def self.properties
         @properties ||= BulkDataTestKitProperties.new(
           resource_type: config.options[:resource_type],

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_status_check_test.rb

@@ -22,7 +22,9 @@ module BulkDataTestKit
       DESCRIPTION
       # link 'http://hl7.org/fhir/uv/bulkdata/STU1.0.1/export/index.html#bulk-data-status-request'
 
-      input :polling_url
+      input :polling_url, :bulk_timeout
+      input :bearer_token,
+            optional: true
 
       output :status_response, :requires_access_token
 

data/lib/bulk_data_test_kit/v1.0.1/bulk_data_test_suite.rb

@@ -26,14 +26,13 @@ module BulkDataTestKit
       ]
 
       VALIDATION_MESSAGE_FILTERS = [
-        /Observation\.effective\.ofType\(Period\): .*vs-1:/ # Invalid invariant in FHIR v4.0.1
+        /Observation\.effective\.ofType\(Period\): .*vs-1:/, # Invalid invariant in FHIR v4.0.1
+        /\A\S+: \S+: URL value '.*' does not resolve/
       ].freeze
 
       VERSION_SPECIFIC_MESSAGE_FILTERS = [].freeze
 
-      validator do
-        url ENV.fetch('BULK_DATA_VALIDATOR_URL', 'http://validator_service:4567')
-
+      fhir_resource_validator do
         message_filters = VALIDATION_MESSAGE_FILTERS + VERSION_SPECIFIC_MESSAGE_FILTERS
 
         $num_messages = 0
@@ -42,13 +41,17 @@ module BulkDataTestKit
         $capped_errors = false
 
         exclude_message do |message|
-          if message.type != 'error'
-            $num_messages += 1
-          else
-            $num_errors += 1
+          matches_filter = message_filters.any? { |filter| filter.match? message.message }
+
+          unless matches_filter
+            if message.type != 'error'
+              $num_messages += 1
+            else
+              $num_errors += 1
+            end
           end
 
-          message_filters.any? { |filter| filter.match? message.message } ||
+          matches_filter ||
             (message.type != 'error' && $num_messages > 50 && !message.message.include?('Inferno is only showing the first')) ||
             (message.type == 'error' && $num_errors > 20 && !message.message.include?('Inferno is only showing the first'))
         end

data/lib/bulk_data_test_kit/v1.0.1/group/bulk_data_group_export_cancel_group.rb

@@ -1,7 +1,7 @@
 # frozen_string_literal: true
 
 require_relative '../../export_kick_off_performer'
-require_relative '../bulk_data_export_cancel_test'
+require_relative '../bulk_data_group_export_cancel_test'
 
 module BulkDataTestKit
   module BulkDataV101
@@ -14,19 +14,13 @@ module BulkDataTestKit
         correct behavior.
       )
 
-      input :bearer_token
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
+      input :bearer_token,
+            optional: true
       input :group_id,
             title: 'Group ID',
             description: 'The Group ID associated with the group of patients to be exported.'
 
-      test from: :bulk_data_export_cancel,
-           id: :bulk_data_group_export_cancel,
-           config: {
-             options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
-           }
+      test from: :bulk_data_export_group_cancel
     end
   end
 end

data/lib/bulk_data_test_kit/v1.0.1/group/bulk_data_group_export_group.rb

@@ -3,7 +3,9 @@
 require 'tls_test_kit'
 require_relative '../bulk_data_export_operation_support_test'
 require_relative '../bulk_data_no_auth_test'
+require_relative '../bulk_data_group_no_auth_test'
 require_relative '../bulk_data_export_kick_off_test'
+require_relative '../bulk_data_group_export_kick_off_test'
 require_relative '../bulk_data_status_check_test'
 require_relative '../bulk_data_output_check_test'
 
@@ -24,9 +26,6 @@ module BulkDataTestKit
       input :group_id,
             title: 'Group ID',
             description: 'The Group ID associated with the group of patients to be exported.'
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
       input :bulk_timeout,
             title: 'Export Times Out after (1-600)',
             description: <<~DESCRIPTION,
@@ -74,17 +73,9 @@ module BulkDataTestKit
         )
       end
 
-      test from: :bulk_data_no_auth_reject,
-           id: :bulk_data_group_no_auth_reject,
-           config: {
-             options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
-           }
+      test from: :bulk_data_group_no_auth_reject
 
-      test from: :bulk_data_kick_off,
-           id: :bulk_data_group_kick_off,
-           config: {
-             options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
-           }
+      test from: :bulk_data_group_kick_off
 
       test from: :bulk_data_status_check,
            id: :bulk_data_group_status_check,

data/lib/bulk_data_test_kit/v1.0.1/patient/bulk_data_patient_export_cancel_group.rb

@@ -14,10 +14,8 @@ module BulkDataTestKit
         correct behavior.
       )
 
-      input :bearer_token
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
+      input :bearer_token, 
+            optional: true
 
       output :patient_cancelled_polling_url
 

data/lib/bulk_data_test_kit/v1.0.1/patient/bulk_data_patient_export_group.rb

@@ -21,9 +21,6 @@ module BulkDataTestKit
             title: 'Bulk Data Authorization Bearer Token',
             description: 'The authorization bearer token for the Bulk FHIR server. If not required, leave blank.',
             optional: true
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
       input :bulk_timeout,
             title: 'Export Times Out after (1-600)',
             description: <<~DESCRIPTION,

data/lib/bulk_data_test_kit/v1.0.1/system_export/bulk_data_system_export_cancel_group.rb

@@ -14,10 +14,8 @@ module BulkDataTestKit
         correct behavior.
       )
 
-      input :bearer_token
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
+      input :bearer_token, 
+            optional: true
 
       output :system_cancelled_polling_url
 

data/lib/bulk_data_test_kit/v1.0.1/system_export/bulk_data_system_export_group.rb

@@ -21,9 +21,6 @@ module BulkDataTestKit
             title: 'Bulk Data Authorization Bearer Token',
             description: 'The authorization bearer token for the Bulk FHIR server. If not required, leave blank.',
             optional: true
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
       input :bulk_timeout,
             title: 'Export Times Out after (1-600)',
             description: <<~DESCRIPTION,

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_export_cancel_test.rb

@@ -19,6 +19,8 @@ module BulkDataTestKit
       id :bulk_data_export_cancel_stu2
 
       input :cancelled_polling_url
+      input :bearer_token,
+            optional: true
 
       run do
         perform_cancelled_polling_test(cancelled_polling_url)

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_export_tests_test_group.rb

@@ -10,6 +10,8 @@ module BulkDataTestKit
       id :bulk_data_export_tests_v200
       title 'Bulk Data Export Tests'
 
+      input :bulk_server_url
+
       group do
         id :bulk_data_server_tests_stu2
         title 'Bulk Data Server TLS Tests'

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_group_outputFormat_param_test.rb

@@ -0,0 +1,16 @@
+# frozen_string_literal: true
+
+require_relative 'bulk_data_outputFormat_param_test'
+
+module BulkDataTestKit
+  module BulkDataV200
+    class BulkDataGroupOutputFormatParamTest < BulkDataV200::BulkDataOutputFormatParamTest
+      id :output_format_in_group_export_response
+      input :group_id
+
+      config(
+        options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
+      )
+    end
+  end
+end

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_group_since_param_test.rb

@@ -0,0 +1,16 @@
+# frozen_string_literal: true
+
+require_relative 'bulk_data_since_param_test'
+
+module BulkDataTestKit
+  module BulkDataV200
+    class BulkDataGroupSinceParamTest < BulkDataV200::BulkDataSinceParamTest
+      id :since_in_group_export_response
+      input :group_id
+
+      config(
+        options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
+      )
+    end
+  end
+end

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_outputFormat_param_test.rb

@@ -21,6 +21,9 @@ module BulkDataTestKit
         as the abbreviated representations application/ndjson and ndjson.
       DESCRIPTION
 
+      input :bearer_token,
+            optional: true
+
       def self.properties
         @properties ||= BulkDataTestKitProperties.new(
           resource_type: config.options[:resource_type],

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_since_param_test.rb

@@ -27,6 +27,8 @@ module BulkDataTestKit
         After the export was successfully initiated, it is then cancelled.
       DESCRIPTION
 
+      input :bearer_token,
+            optional: true
       input :since_timestamp,
             title: 'Timestamp for _since parameter',
             description: 'A timestamp formatted as a FHIR instant which will be used to test the ' \

data/lib/bulk_data_test_kit/v2.0.0/bulk_data_test_suite.rb

@@ -26,14 +26,13 @@ module BulkDataTestKit
       ]
 
       VALIDATION_MESSAGE_FILTERS = [
-        /Observation\.effective\.ofType\(Period\): .*vs-1:/ # Invalid invariant in FHIR v4.0.1
+        /Observation\.effective\.ofType\(Period\): .*vs-1:/, # Invalid invariant in FHIR v4.0.1
+        /\A\S+: \S+: URL value '.*' does not resolve/
       ].freeze
 
       VERSION_SPECIFIC_MESSAGE_FILTERS = [].freeze
 
-      validator do
-        url ENV.fetch('BULK_DATA_VALIDATOR_URL', 'http://validator_service:4567')
-
+      fhir_resource_validator do
         message_filters = VALIDATION_MESSAGE_FILTERS + VERSION_SPECIFIC_MESSAGE_FILTERS
 
         $num_messages = 0
@@ -42,13 +41,17 @@ module BulkDataTestKit
         $capped_errors = false
 
         exclude_message do |message|
-          if message.type != 'error'
-            $num_messages += 1
-          else
-            $num_errors += 1
+          matches_filter = message_filters.any? { |filter| filter.match? message.message }
+
+          unless matches_filter
+            if message.type != 'error'
+              $num_messages += 1
+            else
+              $num_errors += 1
+            end
           end
 
-          message_filters.any? { |filter| filter.match? message.message } ||
+           matches_filter ||
             (message.type != 'error' && $num_messages > 50 && !message.message.include?('Inferno is only showing the first')) ||
             (message.type == 'error' && $num_errors > 20 && !message.message.include?('Inferno is only showing the first'))
         end

data/lib/bulk_data_test_kit/v2.0.0/group/bulk_data_group_export_parameters_group.rb

@@ -2,7 +2,9 @@
 
 require_relative '../../export_kick_off_performer'
 require_relative '../bulk_data_outputFormat_param_test'
+require_relative '../bulk_data_group_outputFormat_param_test'
 require_relative '../bulk_data_since_param_test'
+require_relative '../bulk_data_group_since_param_test'
 
 module BulkDataTestKit
   module BulkDataV200
@@ -17,24 +19,12 @@ module BulkDataTestKit
             title: 'Bulk Data Authorization Bearer Token',
             description: 'The authorization bearer token for the Bulk FHIR server. If not required, leave blank.',
             optional: true
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
       input :group_id,
             title: 'Group ID',
             description: 'The Group ID associated with the group of patients to be exported.'
 
-      test from: :output_format_in_export_response,
-           id: :output_format_in_group_export_response,
-           config: {
-             options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
-           }
-
-      test from: :since_in_export_response,
-           id: :since_in_group_export_response,
-           config: {
-             options: { resource_type: 'Group', bulk_export_url: 'Group/[group_id]/$export' }
-           }
+      test from: :output_format_in_group_export_response
+      test from: :since_in_group_export_response
     end
   end
 end

data/lib/bulk_data_test_kit/v2.0.0/patient/bulk_data_patient_export_parameters_group.rb

@@ -17,9 +17,6 @@ module BulkDataTestKit
             title: 'Bulk Data Authorization Bearer Token',
             description: 'The authorization bearer token for the Bulk FHIR server. If not required, leave blank.',
             optional: true
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
 
       test from: :output_format_in_export_response,
            id: :output_format_in_patient_export_response,

data/lib/bulk_data_test_kit/v2.0.0/system_export/bulk_data_system_export_parameters_group.rb

@@ -17,9 +17,6 @@ module BulkDataTestKit
             title: 'Bulk Data Authorization Bearer Token',
             description: 'The authorization bearer token for the Bulk FHIR server. If not required, leave blank.',
             optional: true
-      input :bulk_server_url,
-            title: 'Bulk Data FHIR URL',
-            description: 'The URL of the Bulk FHIR server.'
 
       test from: :output_format_in_export_response,
            id: :output_format_in_system_export_response,

data/lib/bulk_data_test_kit/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 module BulkDataTestKit
-  VERSION = '0.9.3'
+  VERSION = '0.10.0'
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: bulk_data_test_kit
 version: !ruby/object:Gem::Version
-  version: 0.9.3
+  version: 0.10.0
 platform: ruby
 authors:
 - Inferno Team
 autorequire:
 bindir: bin
 cert_chain: []
-date: 2024-03-07 00:00:00.000000000 Z
+date: 2024-05-06 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bloomer
@@ -212,7 +212,10 @@ files:
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_export_kick_off_test.rb
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_export_operation_support_test.rb
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_export_tests_test_group.rb
+- lib/bulk_data_test_kit/v1.0.1/bulk_data_group_export_cancel_test.rb
+- lib/bulk_data_test_kit/v1.0.1/bulk_data_group_export_kick_off_test.rb
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_group_export_test_group.rb
+- lib/bulk_data_test_kit/v1.0.1/bulk_data_group_no_auth_test.rb
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_multiple_patients_test.rb
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_ndjson_download_test.rb
 - lib/bulk_data_test_kit/v1.0.1/bulk_data_no_auth_test.rb
@@ -235,6 +238,8 @@ files:
 - lib/bulk_data_test_kit/v2.0.0/bulk_data_export_cancel_test.rb
 - lib/bulk_data_test_kit/v2.0.0/bulk_data_export_tests_test_group.rb
 - lib/bulk_data_test_kit/v2.0.0/bulk_data_group_export_test_group.rb
+- lib/bulk_data_test_kit/v2.0.0/bulk_data_group_outputFormat_param_test.rb
+- lib/bulk_data_test_kit/v2.0.0/bulk_data_group_since_param_test.rb
 - lib/bulk_data_test_kit/v2.0.0/bulk_data_outputFormat_param_test.rb
 - lib/bulk_data_test_kit/v2.0.0/bulk_data_patient_export_test_group.rb
 - lib/bulk_data_test_kit/v2.0.0/bulk_data_since_param_test.rb
@@ -268,7 +273,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
-rubygems_version: 3.3.7
+rubygems_version: 3.5.9
 signing_key:
 specification_version: 4
 summary: Bulk Data Test Kit