briard 2.4.2 → 2.6.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (83) hide show
  1. checksums.yaml +4 -4
  2. data/.github/workflows/codeql-analysis.yml +72 -0
  3. data/.github/workflows/rubocop.yml +50 -0
  4. data/.gitignore +1 -0
  5. data/.rubocop.yml +144 -620
  6. data/.rubocop_todo.yml +76 -0
  7. data/CHANGELOG.md +18 -0
  8. data/Gemfile +2 -0
  9. data/Gemfile.lock +43 -9
  10. data/Rakefile +1 -1
  11. data/{bolognese.gemspec → briard.gemspec} +46 -39
  12. data/lib/briard/array.rb +2 -2
  13. data/lib/briard/author_utils.rb +79 -71
  14. data/lib/briard/cli.rb +12 -13
  15. data/lib/briard/crossref_utils.rb +73 -61
  16. data/lib/briard/datacite_utils.rb +132 -106
  17. data/lib/briard/doi_utils.rb +10 -10
  18. data/lib/briard/metadata.rb +96 -106
  19. data/lib/briard/metadata_utils.rb +87 -78
  20. data/lib/briard/readers/bibtex_reader.rb +65 -65
  21. data/lib/briard/readers/cff_reader.rb +88 -70
  22. data/lib/briard/readers/citeproc_reader.rb +90 -84
  23. data/lib/briard/readers/codemeta_reader.rb +68 -50
  24. data/lib/briard/readers/crosscite_reader.rb +2 -2
  25. data/lib/briard/readers/crossref_reader.rb +249 -210
  26. data/lib/briard/readers/datacite_json_reader.rb +3 -3
  27. data/lib/briard/readers/datacite_reader.rb +225 -189
  28. data/lib/briard/readers/npm_reader.rb +49 -42
  29. data/lib/briard/readers/ris_reader.rb +82 -80
  30. data/lib/briard/readers/schema_org_reader.rb +182 -159
  31. data/lib/briard/string.rb +1 -1
  32. data/lib/briard/utils.rb +4 -4
  33. data/lib/briard/version.rb +3 -1
  34. data/lib/briard/whitelist_scrubber.rb +11 -4
  35. data/lib/briard/writers/bibtex_writer.rb +14 -8
  36. data/lib/briard/writers/cff_writer.rb +33 -26
  37. data/lib/briard/writers/codemeta_writer.rb +19 -15
  38. data/lib/briard/writers/csv_writer.rb +6 -4
  39. data/lib/briard/writers/datacite_json_writer.rb +8 -2
  40. data/lib/briard/writers/jats_writer.rb +33 -28
  41. data/lib/briard/writers/rdf_xml_writer.rb +1 -1
  42. data/lib/briard/writers/ris_writer.rb +30 -18
  43. data/lib/briard/writers/turtle_writer.rb +1 -1
  44. data/lib/briard.rb +6 -6
  45. data/rubocop.sarif +0 -0
  46. data/spec/array_spec.rb +5 -5
  47. data/spec/author_utils_spec.rb +151 -132
  48. data/spec/datacite_utils_spec.rb +135 -83
  49. data/spec/doi_utils_spec.rb +168 -164
  50. data/spec/find_from_format_spec.rb +69 -69
  51. data/spec/fixtures/vcr_cassettes/Briard_Metadata/sanitize/onlies_keep_specific_tags.yml +65 -0
  52. data/spec/fixtures/vcr_cassettes/Briard_Metadata/sanitize/removes_a_tags.yml +65 -0
  53. data/spec/metadata_spec.rb +91 -90
  54. data/spec/readers/bibtex_reader_spec.rb +43 -38
  55. data/spec/readers/cff_reader_spec.rb +165 -153
  56. data/spec/readers/citeproc_reader_spec.rb +45 -40
  57. data/spec/readers/codemeta_reader_spec.rb +128 -115
  58. data/spec/readers/crosscite_reader_spec.rb +34 -24
  59. data/spec/readers/crossref_reader_spec.rb +1098 -939
  60. data/spec/readers/datacite_json_reader_spec.rb +53 -40
  61. data/spec/readers/datacite_reader_spec.rb +1541 -1337
  62. data/spec/readers/npm_reader_spec.rb +48 -43
  63. data/spec/readers/ris_reader_spec.rb +53 -47
  64. data/spec/readers/schema_org_reader_spec.rb +329 -267
  65. data/spec/spec_helper.rb +6 -5
  66. data/spec/utils_spec.rb +371 -347
  67. data/spec/writers/bibtex_writer_spec.rb +143 -143
  68. data/spec/writers/cff_writer_spec.rb +96 -90
  69. data/spec/writers/citation_writer_spec.rb +34 -33
  70. data/spec/writers/citeproc_writer_spec.rb +226 -224
  71. data/spec/writers/codemeta_writer_spec.rb +18 -16
  72. data/spec/writers/crosscite_writer_spec.rb +91 -73
  73. data/spec/writers/crossref_writer_spec.rb +99 -91
  74. data/spec/writers/csv_writer_spec.rb +70 -70
  75. data/spec/writers/datacite_json_writer_spec.rb +78 -68
  76. data/spec/writers/datacite_writer_spec.rb +417 -322
  77. data/spec/writers/jats_writer_spec.rb +177 -161
  78. data/spec/writers/rdf_xml_writer_spec.rb +68 -63
  79. data/spec/writers/ris_writer_spec.rb +162 -162
  80. data/spec/writers/schema_org_writer_spec.rb +329 -294
  81. data/spec/writers/turtle_writer_spec.rb +47 -47
  82. metadata +242 -166
  83. data/.github/workflows/release.yml +0 -47
data/spec/spec_helper.rb CHANGED
@@ -34,7 +34,7 @@ RSpec.configure do |config|
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  end
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  def fixture_path
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- File.expand_path("../fixtures", __FILE__) + '/'
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+ "#{File.expand_path('fixtures', __dir__)}/"
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  end
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  # This code was adapted from Thor, available under MIT-LICENSE
@@ -52,7 +52,7 @@ def capture(stream)
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  result
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  end
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- def capture_stdout(&block)
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+ def capture_stdout
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  original_stdout = $stdout
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  $stdout = fake = StringIO.new
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  begin
@@ -63,7 +63,7 @@ def capture_stdout(&block)
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  fake.string
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  end
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- def capture_stderr(&block)
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+ def capture_stderr
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  original_stderr = $stderr
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  $stderr = fake = StringIO.new
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  begin
@@ -77,7 +77,8 @@ end
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  # This code was adapted from Ruby on Rails, available under MIT-LICENSE
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  # Copyright (c) 2004-2013 David Heinemeier Hansson
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  def silence_warnings
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- old_verbose, $VERBOSE = $VERBOSE, nil
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+ old_verbose = $VERBOSE
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+ $VERBOSE = nil
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  yield
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  ensure
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  $VERBOSE = old_verbose
@@ -86,7 +87,7 @@ end
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  alias silence capture
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  VCR.configure do |c|
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- c.cassette_library_dir = "spec/fixtures/vcr_cassettes"
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+ c.cassette_library_dir = 'spec/fixtures/vcr_cassettes'
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  c.hook_into :webmock
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  c.ignore_localhost = true
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  c.ignore_hosts 'codeclimate.com'