RubyGems - bolognese - Versions diffs - 2.3.0 → 2.7.0 - Mend

bolognese 2.3.0 → 2.7.0

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data/spec/fixtures/crossref_schema_4.6_values.xml DELETED Viewed

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-                      <citation key="ref5">
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-                          <author>Park</author>
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-                          <unstructured_citation>Riley, J. (2017). Understanding metadata.
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data/spec/fixtures/datacite-empty-sizes.xml DELETED Viewed

@@ -1,57 +0,0 @@
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-<resource xmlns="http://datacite.org/schema/kernel-2.2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-2.2 http://schema.datacite.org/meta/kernel-2.2/metadata.xsd">
-  <identifier identifierType="DOI">10.13116/c6b6060e-0648-4f88-b108-95ea00928171</identifier>
-  <creators>
-    <creator>
-      <creatorName>EvK2 CNR Committee</creatorName>
-    </creator>
-  </creators>
-  <titles>
-    <title>SHARE (Stations at High Altitude for Research on the Environment) Network</title>
-    <title titleType="Subtitle">Urdukas (Baltoro Glacier, Baltistan - Pakistan)</title>
-  </titles>
-  <publisher>EvK2 CNR Committee</publisher>
-  <publicationYear>2011</publicationYear>
-  <subjects>
-    <subject>Environmental research</subject>
-  </subjects>
-  <contributors>
-    <contributor contributorType="Funder">
-      <contributorName>EvK2 CNR Committee</contributorName>
-    </contributor>
-  </contributors>
-  <dates>
-    <date dateType="Valid">
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-    <relatedIdentifier relatedIdentifierType="URL" relationType="IsDocumentedBy">http://geonetwork.evk2cnr.org:8080/geonetwork/srv/en/main.home</relatedIdentifier>
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-  <sizes>
-    <size>
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-    <format>text</format>
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-  <version>1.0</version>
-  <rights>
-	</rights>
-  <descriptions>
-    <description descriptionType="Abstract">The Baltoro Glacier, 62 km long, is one of the longest glaciers outside of the Polar Regions. It is located in Baltistan, in the Northern Areas of Pakistan, and runs through part of the Karakoram mountain range. In the middle of the Baltoro glacier there is the campsite of Urdukas located on the trek way to Concordia.
-This automatic weather station was installed, in June 17, 2004 on the Baltoro Glacier, more precisely on a moraine ridge close to the left glacier margin at 3926 m asl.
-Geographical coordinates:
-Latitude: 35deg 43' 41" N
-Longitude: 76deg 17' 10" EThe Urdukas AWS provides data (with a 60 minute time resolution" of the following parameters:
-- air temperature (degC)
-- atmopherich pressure (hPa)
-- relative humidity (%)
-- total precipitation (mm)
-- global solar radiation (W/m2)
-- wind speed (m/s)
-- wind direction (degree)</description>
-  </descriptions>
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data/spec/fixtures/datacite-example-ROR-nameIdentifiers.xml DELETED Viewed

@@ -1,125 +0,0 @@
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-    <identifier identifierType="DOI">10.48321/D1Z60Q</identifier>
-    <creators>
-        <creator>
-            <creatorName nameType="Personal">Ashwini Sukale</creatorName>
-            <nameIdentifier schemeURI="https://orcid.org/" nameIdentifierScheme="ORCID">0000-0001-9998-0117</nameIdentifier>
-            <affiliation affiliationIdentifier="05bp8ka77" affiliationIdentifierScheme="ROR"> Metadata Game Changers </affiliation>
-            <affiliation affiliationIdentifier="grid.268117.b" affiliationIdentifierScheme="GRID">Wesleyan University</affiliation>
-        </creator>
-        <creator>
-            <creatorName nameType="Personal">Erin Robinson</creatorName>
-            <nameIdentifier schemeURI="https://orcid.org/" nameIdentifierScheme="ORCID">https://orcid.org/0000-0001-9998-0114</nameIdentifier>
-            <affiliation schemeURI="https://ror.org" affiliationIdentifier="https://ror.org/05bp8ka05" affiliationIdentifierScheme="ROR"> Metadata Game Changers </affiliation>
-            <affiliation affiliationIdentifier="grid.268117.b" affiliationIdentifierScheme="GRID" schemeURI="https://grid.ac/institutes/">Wesleyan University</affiliation>
-        </creator>
-        <creator>
-            <creatorName nameType="Organizational">Gump South Pacific Research Station</creatorName>
-            <nameIdentifier nameIdentifierScheme="ROR" schemeURI="https://ror.org/">https://ror.org/04sk0et52</nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Organizational">University of Vic</creatorName>
-            <nameIdentifier nameIdentifierScheme="ROR" schemeURI="https://ror.org">006zjws59</nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Organizational">University of Kivu</creatorName>
-            <nameIdentifier nameIdentifierScheme="ROR">http://ror.org/01qfhxr31</nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Organizational">សាកលវិទ្យាល័យកម្ពុជា</creatorName>
-            <nameIdentifier nameIdentifierScheme="RORS">http://ror.org/025e3rc84</nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Organizational">جامعة زاخۆ</creatorName>
-            <nameIdentifier nameIdentifierScheme="RORS" schemeURI="https://ror.org">05sd1pz50</nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Personal">Ashwini S</creatorName>
-            <nameIdentifier nameIdentifierScheme="ORCID">0000-0001-9998-0117</nameIdentifier>
-        </creator>
-         <creator>
-            <creatorName nameType="Personal">Mike B</creatorName>
-            <nameIdentifier nameIdentifierScheme="ORCID"> 0000-0001-9998-0118 </nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Organizational">Gump South Pacific Research Station</creatorName>
-            <nameIdentifier nameIdentifierScheme="ROR" schemeURI="https://ror.org/">https://ror.org/04sk0et52/</nameIdentifier>
-        </creator>
-        <creator>
-            <creatorName nameType="Personal">Ashwini Sukale</creatorName>
-            <nameIdentifier schemeURI="https://orcid.org/" nameIdentifierScheme="ORCID">https://orcid.org/0000-0001-9998-0117/</nameIdentifier>
-        </creator>
-    </creators>
-    <titles>
-        <title xml:lang="en-US">Genomic Standards Consortium (GSC) Island Sampling Day: Moorea Reef to Ridges Genomic Transect</title>
-    </titles>
-    <publisher xml:lang="en-US">DMPHub</publisher>
-    <publicationYear>2022</publicationYear>
-    <contributors>
-        <contributor contributorType="Producer">
-            <contributorName nameType="Organizational"> Nawroz University </contributorName>
-            <nameIdentifier nameIdentifierScheme="ROR">04gp75d48</nameIdentifier>
-        </contributor>
-        <contributor contributorType="ProjectLeader">
-            <contributorName nameType="Personal">Neil Davies</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0001-8085-5014</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/01an7q238" affiliationIdentifierScheme="ROR"> University of California, Berkeley </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectLeader">
-            <contributorName nameType="Personal">Ramona Walls</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0001-8815-0078</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/03m2x1q45" affiliationIdentifierScheme="ROR"> University of Arizona </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectLeader">
-            <contributorName nameType="Personal">Serge Planes</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0002-5689-5371</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/02feahw73" affiliationIdentifierScheme="ROR"> French National Centre for Scientific Research </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectLeader">
-            <contributorName nameType="Personal">Chris Meyer</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0003-2501-7952</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/01pp8nd67" affiliationIdentifierScheme="ROR"> Smithsonian Institution </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectLeader">
-            <contributorName nameType="Personal">Lynn Schriml</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0001-8910-9851</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/04rq5mt64" affiliationIdentifierScheme="ROR"> University of Maryland, Baltimore </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectMember">
-            <contributorName nameType="Personal">Scott Tighe</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0002-3988-0741</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/0155zta11" affiliationIdentifierScheme="ROR"> University of Vermont </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectMember">
-            <contributorName nameType="Personal">Pier Luigi Buttigieg</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0002-4366-3088</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/02h2x0161" affiliationIdentifierScheme="ROR"> GEOMAR Helmholtz Centre for Ocean Research Kiel </affiliation>
-        </contributor>
-        <contributor contributorType="ProjectMember">
-            <contributorName nameType="Personal">Raïssa Meyer</contributorName>
-            <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="https://orcid.org/">https://orcid.org/0000-0002-2996-719X</nameIdentifier>
-            <affiliation affiliationIdentifier="https://ror.org/032e6b942" affiliationIdentifierScheme="ROR"> Alfred Wegener Institute for Polar and Marine Research </affiliation>
-        </contributor>
-        <contributor contributorType="Sponsor">
-            <contributorName nameType="Organizational">University of Greenland (https://www.uni.gl/)</contributorName>
-            <nameIdentifier nameIdentifierScheme="ROR" schemeURI="https://ror.org/">https://ror.org/00t5j6b61</nameIdentifier>
-        </contributor>
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-    <language>en-US</language>
-    <resourceType resourceTypeGeneral="OutputManagementPlan">Data Management Plan</resourceType>
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-        <description xml:lang="en-US" descriptionType="Abstract"> &lt;p&gt;Here we describe a project that supports the mission of the Genomic Standards Consortium (GSC) and contributes to the “Ocean Biomolecular Observations Network” (OBON) and the “Ocean Best Practice System” (OBPS - Omics Task Team), flagship programs of the UN Ocean Decade of Ocean Science for Sustainable Development. The project serves as a test case for two related infrastructure projects that aim to improve standards, policies, and best practices in sample collection: Sampling Nature (SN) Research Coordination Network and the Internet of Samples (iSamples).&lt;/p&gt;  &lt;p&gt;&lt;strong&gt;The project’s primary goal (first paper) is methodologica&lt;/strong&gt;l: (i) to demonstrate the value of genomic standards for both genomic research and secondary interdisciplinary research, (ii) to highlight the importance of data curation workflows that follow FAIR+CARE principles maximizing the potential for appropriate reuse of data and material samples, (iii) to illustrate the challenges that remain in implementing those standards - including ethical, legal, and social aspects, and (iv) to demonstrate some of the tools, infrastructures, and best-practices available for overcoming these challenges. This paper will include all the elements of a data paper (primary publication of the initial data collected), but with broader discussion around it as a use case for metadata standards and best practices in multi-omic sampling.&lt;/p&gt;  &lt;p&gt;&lt;strong&gt;The project’s secondary goal (second paper) is to address research questions including&lt;/strong&gt;: (1) To what extent can one day of environmental sampling, and subsequent multi-omic analyses, characterize the ecological state of an island (coupled marine-terrestrial ecosystem)? (2) To what extent might such surveys serve as baselines for futuromic study (future analysis of biomolecules from the material samples archived), and (3) if repeated, could these surveys help address long-term changes in genomic biodiversity? (4) How does marine and terrestrial eDNA change across a transect? Moorea is one of the most well-described biotas in the world and has one of the longest and most intensive time-series of ecological data, particularly for coral reef ecosystems. It thus serves as a powerful calibration site for such a study.&lt;/p&gt;  &lt;p&gt;&lt;br&gt;&lt;strong&gt;The project’s broader impact goal is public outreach &lt;/strong&gt;– if possible engage local citizen scientists/schools, ideally through Fare Natura (ecomuseum at entrance to the Opunohu Valley. (Also perhaps local Associations that might be interested, e.g., Te Pu Atitia). Sampling Nature will produce an outreach videos based on this Island Sampling Day.&lt;/p&gt; </description>
-    </descriptions>
-    <fundingReferences>
-        <fundingReference>
-            <funderName>Genomic Standards Consortium</funderName>
-        </fundingReference>
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data/spec/fixtures/datacite-example-affiliation.xml DELETED Viewed

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data/spec/fixtures/datacite-example-ancientdates-v4.3.xml DELETED Viewed

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data/spec/fixtures/datacite-example-complicated-tba.xml DELETED Viewed

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data/spec/fixtures/datacite-example-complicated-v3.0.xml DELETED Viewed

@@ -1,48 +0,0 @@
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