bolognese 2.0.1 → 2.3.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (567) hide show
  1. checksums.yaml +4 -4
  2. data/.github/workflows/ci.yml +1 -1
  3. data/.github/workflows/release.yml +2 -2
  4. data/Gemfile.lock +9 -9
  5. data/README.md +1 -1
  6. data/bolognese.gemspec +4 -5
  7. data/lib/bolognese/author_utils.rb +5 -5
  8. data/lib/bolognese/datacite_utils.rb +12 -5
  9. data/lib/bolognese/metadata_utils.rb +2 -1
  10. data/lib/bolognese/readers/citeproc_reader.rb +6 -0
  11. data/lib/bolognese/readers/crossref_reader.rb +37 -4
  12. data/lib/bolognese/readers/datacite_reader.rb +6 -10
  13. data/lib/bolognese/readers/schema_org_reader.rb +26 -4
  14. data/lib/bolognese/utils.rb +20 -13
  15. data/lib/bolognese/version.rb +1 -1
  16. data/lib/bolognese/writers/datacite_json_writer.rb +1 -4
  17. data/lib/bolognese/writers/jats_writer.rb +4 -1
  18. data/lib/bolognese/writers/schema_org_writer.rb +5 -1
  19. data/resources/kernel-4/include/datacite-contributorType-v4.xsd +3 -1
  20. data/resources/kernel-4/include/datacite-dateType-v4.xsd +3 -1
  21. data/resources/kernel-4/include/datacite-relatedIdentifierType-v4.xsd +5 -2
  22. data/resources/kernel-4/include/datacite-relationType-v4.xsd +7 -3
  23. data/resources/kernel-4/include/datacite-resourceType-v4.xsd +5 -1
  24. data/resources/kernel-4/include/datacite-titleType-v4.xsd +1 -1
  25. data/resources/kernel-4/metadata.xsd +2 -1
  26. data/resources/kernel-4.6/include/datacite-contributorType-v4.xsd +37 -0
  27. data/resources/kernel-4.6/include/datacite-dateType-v4.xsd +27 -0
  28. data/resources/kernel-4.6/include/datacite-descriptionType-v4.xsd +19 -0
  29. data/resources/kernel-4.6/include/datacite-funderIdentifierType-v4.xsd +16 -0
  30. data/resources/kernel-4.6/include/datacite-nameType-v4.xsd +10 -0
  31. data/resources/kernel-4.6/include/datacite-numberType-v4.xsd +12 -0
  32. data/resources/kernel-4.6/include/datacite-relatedIdentifierType-v4.xsd +37 -0
  33. data/resources/kernel-4.6/include/datacite-relationType-v4.xsd +57 -0
  34. data/resources/kernel-4.6/include/datacite-resourceType-v4.xsd +49 -0
  35. data/resources/kernel-4.6/include/datacite-titleType-v4.xsd +14 -0
  36. data/resources/kernel-4.6/include/xml.xsd +286 -0
  37. data/resources/kernel-4.6/metadata.xsd +712 -0
  38. metadata +31 -554
  39. data/spec/array_spec.rb +0 -22
  40. data/spec/author_utils_spec.rb +0 -253
  41. data/spec/cli_spec.rb +0 -226
  42. data/spec/datacite_utils_spec.rb +0 -207
  43. data/spec/doi_utils_spec.rb +0 -314
  44. data/spec/find_from_format_spec.rb +0 -114
  45. data/spec/fixtures/aida.json +0 -82
  46. data/spec/fixtures/cgimp_package.json +0 -18
  47. data/spec/fixtures/cit_package.json +0 -19
  48. data/spec/fixtures/citeproc-no-author.json +0 -26
  49. data/spec/fixtures/citeproc-no-categories.json +0 -21
  50. data/spec/fixtures/citeproc.json +0 -32
  51. data/spec/fixtures/codemeta.json +0 -86
  52. data/spec/fixtures/codemeta_v2.json +0 -86
  53. data/spec/fixtures/crosscite.json +0 -63
  54. data/spec/fixtures/crossref.bib +0 -14
  55. data/spec/fixtures/crossref.ris +0 -15
  56. data/spec/fixtures/crossref.xml +0 -606
  57. data/spec/fixtures/datacite-empty-sizes.xml +0 -57
  58. data/spec/fixtures/datacite-example-ROR-nameIdentifiers.xml +0 -117
  59. data/spec/fixtures/datacite-example-affiliation.xml +0 -114
  60. data/spec/fixtures/datacite-example-ancientdates-v4.3.xml +0 -29
  61. data/spec/fixtures/datacite-example-complicated-tba.xml +0 -56
  62. data/spec/fixtures/datacite-example-complicated-v3.0.xml +0 -48
  63. data/spec/fixtures/datacite-example-complicated-v4.0.xml +0 -54
  64. data/spec/fixtures/datacite-example-complicated-v4.1.xml +0 -57
  65. data/spec/fixtures/datacite-example-dissertation-v4.4.xml +0 -56
  66. data/spec/fixtures/datacite-example-escaped-text.xml +0 -56
  67. data/spec/fixtures/datacite-example-full-v4.4.xml +0 -114
  68. data/spec/fixtures/datacite-example-full-v4.5.xml +0 -255
  69. data/spec/fixtures/datacite-example-geolocation-2.xml +0 -141
  70. data/spec/fixtures/datacite-example-geolocation.xml +0 -66
  71. data/spec/fixtures/datacite-example-nameIdentifier-with-schemeURI.xml +0 -94
  72. data/spec/fixtures/datacite-example-polygon-v4.1.xml +0 -163
  73. data/spec/fixtures/datacite-example-relateditems-with-attributes.xml +0 -61
  74. data/spec/fixtures/datacite-example-relateditems.xml +0 -61
  75. data/spec/fixtures/datacite-example-xs-string.xml +0 -28
  76. data/spec/fixtures/datacite-formats-with-xs.xml +0 -22
  77. data/spec/fixtures/datacite-funderIdentifier.xml +0 -98
  78. data/spec/fixtures/datacite-geolocation-empty.xml +0 -159
  79. data/spec/fixtures/datacite-geolocationpolygons-multiple.xml +0 -76
  80. data/spec/fixtures/datacite-metadata-sample-complicated-v2.2.xml +0 -52
  81. data/spec/fixtures/datacite-multiple-language.xml +0 -38
  82. data/spec/fixtures/datacite-multiple-rights.xml +0 -59
  83. data/spec/fixtures/datacite-schema-2.2.xml +0 -80
  84. data/spec/fixtures/datacite-seriesinformation.xml +0 -46
  85. data/spec/fixtures/datacite-space-in-sizes.xml +0 -52
  86. data/spec/fixtures/datacite-xml-lang.xml +0 -51
  87. data/spec/fixtures/datacite.json +0 -89
  88. data/spec/fixtures/datacite.xml +0 -40
  89. data/spec/fixtures/datacite_dataset.xml +0 -58
  90. data/spec/fixtures/datacite_malformed_creator.xml +0 -52
  91. data/spec/fixtures/datacite_missing_creator.xml +0 -33
  92. data/spec/fixtures/datacite_schema_3.xml +0 -58
  93. data/spec/fixtures/datacite_software.json +0 -21
  94. data/spec/fixtures/datacite_software_missing_comma.json +0 -18
  95. data/spec/fixtures/datacite_software_overlapping_keys.json +0 -18
  96. data/spec/fixtures/datacite_software_version.json +0 -74
  97. data/spec/fixtures/edam_package.json +0 -12
  98. data/spec/fixtures/funding_reference.xml +0 -53
  99. data/spec/fixtures/gtex.xml +0 -71
  100. data/spec/fixtures/maremma/codemeta.json +0 -36
  101. data/spec/fixtures/nist.xml +0 -35
  102. data/spec/fixtures/ns0.xml +0 -2
  103. data/spec/fixtures/pure.bib +0 -14
  104. data/spec/fixtures/pure.ris +0 -15
  105. data/spec/fixtures/pure.xml +0 -188
  106. data/spec/fixtures/ris_bug.ris +0 -9
  107. data/spec/fixtures/schema_4.0.xml +0 -140
  108. data/spec/fixtures/schema_org.json +0 -49
  109. data/spec/fixtures/schema_org_geolocation.json +0 -82
  110. data/spec/fixtures/schema_org_geoshape.json +0 -550
  111. data/spec/fixtures/schema_org_gtex.json +0 -75
  112. data/spec/fixtures/schema_org_list.json +0 -12623
  113. data/spec/fixtures/schema_org_tdl_iodp_invalid_authors.json +0 -25
  114. data/spec/fixtures/schema_org_topmed.json +0 -53
  115. data/spec/fixtures/schema_org_type_as_array.json +0 -41
  116. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/default.yml +0 -106
  117. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_bibtex.yml +0 -106
  118. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_citation.yml +0 -106
  119. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_crossref.yml +0 -106
  120. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_datacite.yml +0 -106
  121. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_jats.yml +0 -106
  122. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_schema_org.yml +0 -106
  123. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/default.yml +0 -106
  124. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_bibtex.yml +0 -106
  125. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_citation.yml +0 -106
  126. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite.yml +0 -106
  127. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite_json.yml +0 -106
  128. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_jats.yml +0 -106
  129. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_schema_org.yml +0 -106
  130. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/default.yml +0 -117
  131. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_datacite.yml +0 -117
  132. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_schema_org.yml +0 -115
  133. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/crossref.yml +0 -54
  134. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/datacite.yml +0 -54
  135. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/jalc.yml +0 -54
  136. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/kisti.yml +0 -54
  137. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/medra.yml +0 -54
  138. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/op.yml +0 -54
  139. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/author.yml +0 -48
  140. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/no_author.yml +0 -48
  141. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/single_author.yml +0 -48
  142. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/with_organization.yml +0 -48
  143. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_state.yml +0 -106
  144. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_title.yml +0 -106
  145. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_description.yml +0 -55
  146. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_identifiers.yml +0 -55
  147. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license.yml +0 -55
  148. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license_name.yml +0 -55
  149. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license_url.yml +0 -55
  150. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_state.yml +0 -55
  151. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/validates_against_schema.yml +0 -55
  152. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +0 -55
  153. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/doi.yml +0 -48
  154. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/doi_with_protocol.yml +0 -48
  155. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/dx_doi_org_url.yml +0 -48
  156. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/force_test_resolver.yml +0 -48
  157. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/https_url.yml +0 -48
  158. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/test_resolver.yml +0 -48
  159. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/test_resolver_http.yml +0 -48
  160. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi.yml +0 -48
  161. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi_with_special_characters.yml +0 -48
  162. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/not_a_doi.yml +0 -48
  163. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/sandbox_url.yml +0 -48
  164. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/url.yml +0 -48
  165. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/crossref.yml +0 -99
  166. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/datacite.yml +0 -99
  167. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/jalc.yml +0 -99
  168. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/kisti.yml +0 -99
  169. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/medra.yml +0 -99
  170. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_a_valid_prefix.yml +0 -48
  171. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_found.yml +0 -99
  172. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/op.yml +0 -99
  173. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi.yml +0 -48
  174. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi_with_protocol.yml +0 -48
  175. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/dx_doi_org_url.yml +0 -48
  176. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/force_stage_resolver.yml +0 -48
  177. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/https_url.yml +0 -48
  178. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/stage_resolver.yml +0 -48
  179. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/stage_resolver_http.yml +0 -48
  180. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref.yml +0 -157
  181. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +0 -157
  182. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite.yml +0 -157
  183. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite_doi_http.yml +0 -157
  184. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/github.yml +0 -106
  185. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/orcid.yml +0 -106
  186. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/schema_org.yml +0 -106
  187. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +0 -157
  188. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/bibtex.yml +0 -106
  189. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/citeproc.yml +0 -106
  190. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/codemeta.yml +0 -106
  191. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crosscite.yml +0 -106
  192. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crossref.yml +0 -106
  193. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite.yml +0 -106
  194. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite_json.yml +0 -106
  195. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/ris.yml +0 -106
  196. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/schema_org.yml +0 -106
  197. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_string/crosscite.yml +0 -106
  198. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_for_match.yml +0 -48
  199. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +0 -48
  200. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_match.yml +0 -48
  201. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_no_match.yml +0 -48
  202. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_for_match.yml +0 -48
  203. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_match.yml +0 -48
  204. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_no_match.yml +0 -48
  205. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org/with_id.yml +0 -48
  206. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org_creators/with_affiliation.yml +0 -48
  207. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org_creators/without_affiliation.yml +0 -48
  208. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/maremma.yml +0 -75
  209. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/metadata_reports.yml +0 -75
  210. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +0 -103
  211. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +0 -102
  212. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +0 -106
  213. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/JaLC.yml +0 -137
  214. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/KISTI.yml +0 -158
  215. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/OP.yml +0 -100
  216. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/affiliation_is_space.yml +0 -101
  217. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book.yml +0 -138
  218. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book_chapter.yml +0 -100
  219. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/article_id_as_page_number.yml +0 -101
  220. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/author_literal.yml +0 -108
  221. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book.yml +0 -99
  222. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_chapter.yml +0 -170
  223. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_chapter_with_RDF_for_container.yml +0 -99
  224. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_oup.yml +0 -98
  225. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/component.yml +0 -120
  226. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset.yml +0 -130
  227. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset_usda.yml +0 -143
  228. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/date_in_future.yml +0 -101
  229. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dissertation.yml +0 -129
  230. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/empty_given_name.yml +0 -101
  231. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/invalid_date.yml +0 -101
  232. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article.yml +0 -100
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  567. data/spec/writers/turtle_writer_spec.rb +0 -102
@@ -1,57 +0,0 @@
1
- <?xml version="1.0"?>
2
- <resource xmlns="http://datacite.org/schema/kernel-2.2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-2.2 http://schema.datacite.org/meta/kernel-2.2/metadata.xsd">
3
- <identifier identifierType="DOI">10.13116/c6b6060e-0648-4f88-b108-95ea00928171</identifier>
4
- <creators>
5
- <creator>
6
- <creatorName>EvK2 CNR Committee</creatorName>
7
- </creator>
8
- </creators>
9
- <titles>
10
- <title>SHARE (Stations at High Altitude for Research on the Environment) Network</title>
11
- <title titleType="Subtitle">Urdukas (Baltoro Glacier, Baltistan - Pakistan)</title>
12
- </titles>
13
- <publisher>EvK2 CNR Committee</publisher>
14
- <publicationYear>2011</publicationYear>
15
- <subjects>
16
- <subject>Environmental research</subject>
17
- </subjects>
18
- <contributors>
19
- <contributor contributorType="Funder">
20
- <contributorName>EvK2 CNR Committee</contributorName>
21
- </contributor>
22
- </contributors>
23
- <dates>
24
- <date dateType="Valid">
25
- </date>
26
- </dates>
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- <language>en</language>
28
- <resourceType resourceTypeGeneral="Dataset"/>
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- <relatedIdentifiers>
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- <relatedIdentifier relatedIdentifierType="URL" relationType="IsDocumentedBy">http://geonetwork.evk2cnr.org:8080/geonetwork/srv/en/main.home</relatedIdentifier>
31
- </relatedIdentifiers>
32
- <sizes>
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- <size>
34
- </size>
35
- </sizes>
36
- <formats>
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- <format>text</format>
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- </formats>
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- <version>1.0</version>
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- <rights>
41
- </rights>
42
- <descriptions>
43
- <description descriptionType="Abstract">The Baltoro Glacier, 62 km long, is one of the longest glaciers outside of the Polar Regions. It is located in Baltistan, in the Northern Areas of Pakistan, and runs through part of the Karakoram mountain range. In the middle of the Baltoro glacier there is the campsite of Urdukas located on the trek way to Concordia.
44
- This automatic weather station was installed, in June 17, 2004 on the Baltoro Glacier, more precisely on a moraine ridge close to the left glacier margin at 3926 m asl.
45
-
46
- Geographical coordinates:
47
- Latitude: 35deg 43' 41" N
48
- Longitude: 76deg 17' 10" EThe Urdukas AWS provides data (with a 60 minute time resolution" of the following parameters:
49
- - air temperature (degC)
50
- - atmopherich pressure (hPa)
51
- - relative humidity (%)
52
- - total precipitation (mm)
53
- - global solar radiation (W/m2)
54
- - wind speed (m/s)
55
- - wind direction (degree)</description>
56
- </descriptions>
57
- </resource>
@@ -1,117 +0,0 @@
1
- <?xml version="1.0"?>
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- <resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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- xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-%s http://schema.datacite.org/meta/kernel-4/metadata.xsd">
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- <identifier identifierType="DOI">10.48321/D1Z60Q</identifier>
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- <creators>
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- <creator>
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- <creatorName nameType="Personal">Ashwini Sukale</creatorName>
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- <nameIdentifier schemeURI="https://orcid.org/" nameIdentifierScheme="ORCID">0000-0001-9998-0117</nameIdentifier>
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- <affiliation affiliationIdentifier="05bp8ka77" affiliationIdentifierScheme="ROR"> Metadata Game Changers </affiliation>
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- <affiliation affiliationIdentifier="grid.268117.b" affiliationIdentifierScheme="GRID">Wesleyan University</affiliation>
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- </creator>
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- <creator>
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- <creatorName nameType="Personal">Erin Robinson</creatorName>
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- <nameIdentifier schemeURI="https://orcid.org/" nameIdentifierScheme="ORCID">https://orcid.org/0000-0001-9998-0114</nameIdentifier>
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- <affiliation schemeURI="https://ror.org" affiliationIdentifier="https://ror.org/05bp8ka05" affiliationIdentifierScheme="ROR"> Metadata Game Changers </affiliation>
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- <affiliation affiliationIdentifier="grid.268117.b" affiliationIdentifierScheme="GRID" schemeURI="https://grid.ac/institutes/">Wesleyan University</affiliation>
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- </creator>
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- <creator>
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- <creatorName nameType="Organizational">Gump South Pacific Research Station</creatorName>
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- <nameIdentifier nameIdentifierScheme="ROR" schemeURI="https://ror.org/">https://ror.org/04sk0et52</nameIdentifier>
21
- </creator>
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- <creator>
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- <creatorName nameType="Organizational">University of Vic</creatorName>
24
- <nameIdentifier nameIdentifierScheme="ROR" schemeURI="https://ror.org">006zjws59</nameIdentifier>
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- </creator>
26
- <creator>
27
- <creatorName nameType="Organizational">University of Kivu</creatorName>
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- <nameIdentifier nameIdentifierScheme="ROR">http://ror.org/01qfhxr31</nameIdentifier>
29
- </creator>
30
- <creator>
31
- <creatorName nameType="Organizational">សាកលវិទ្យាល័យកម្ពុជា</creatorName>
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- <nameIdentifier nameIdentifierScheme="RORS">http://ror.org/025e3rc84</nameIdentifier>
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- </creator>
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- <creator>
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- <creatorName nameType="Organizational">جامعة زاخۆ</creatorName>
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- <nameIdentifier nameIdentifierScheme="RORS" schemeURI="https://ror.org">05sd1pz50</nameIdentifier>
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- </creator>
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- <creatorName nameType="Personal">Smith, John</creatorName>
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- <creatorName>つまらないものですが</creatorName>
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- <title>Właściwości rzutowań podprzestrzeniowych</title>
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- <title titleType="TranslatedTitle">Translation of Polish titles</title>
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- <publisher>Springer</publisher>
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- <publicationYear>2010</publicationYear>
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- <subject subjectScheme="DDC">830 German &amp; related literatures</subject>
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- <date dateType="Other" dateInformation="Correction">2012-12-13</date>
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- <identifier identifierType="DOI">10.5072/100044</identifier>
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- <creatorName nameType="Personal">Luo, R</creatorName>
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- <creatorName nameType="Personal">Liu, B</creatorName>
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- <creator>
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- <creatorName nameType="Personal">Li, Z</creatorName>
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- <title xml:lang="en">
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- Software and supporting material for "SOAPdenovo2: An empirically improved memory-efficient short read de novo assembly"
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- </titles>
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- <publisher xml:lang="en">GigaScience Database</publisher>
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- <publicationYear>2012</publicationYear>
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- <subjects>
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- <subject xml:lang="en">DNA (Genetics)</subject>
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- <subject xml:lang="en">Computer Program</subject>
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- </subjects>
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- <dates>
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- <date dateType="Available">2012-12-13</date>
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- <relatedIdentifier relatedIdentifierType="DOI" relationType="Compiles">10.5072/100038</relatedIdentifier>
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- <description xml:lang="en" descriptionType="Abstract">
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- SOAPdenovo2 is the latest de novo genome assembly package from BGI's SOAP (short oligonucleotide analysis package) suite of tools (homepage here: http://soap.genomics.org.cn/). Compared to SOAPdenovo1, this new version has the advantage of a new
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- algorithm design that reduces memory consumption in graph construction, resolves more repeat regions in contig assembly, increases coverage and length in scaffold construction, improves gap closure, and is optimized for large genomes. Using new
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- sequencing data from the YH (Homo sapiens) diploid genome - the first sequenced Han Chinese individual, an updated assembly was produced (see dataset here: doi:10.5524/100038), with the N50 scores for the contig and scaffold being 3-fold and 50-fold
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- longer, respectively, than the first published version. The genome coverage increased from 81.16% to 93.91%, and memory consumption was ~2/3 times lower during the point of largest memory consumption. Benchmarking with Assemblathon1 and GAGE datasets
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- shows that SOAPdenovo2 greatly surpasses its predecessor SOAPdenovo1 and is competitive to other assemblers on both assembly length and accuracy. In order to facilitate readers to repeat and recreate these findings, configured packages with the
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- compressed pipelines containing all of the necessary shell scripts and tools are available from the BGI FTP server (ftp://public.genomics.org.cn/BGI/SOAPdenovo2). The latest version of SOAPdenovo2 is available from Sourceforge:
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- http://soapdenovo2.sourceforge.net/ These pipelines will also soon be made available from our data platform as Galaxy workflows: http://galaxy.cbiit.cuhk.edu.hk/
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