bolognese 1.9.6 → 1.9.10
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- checksums.yaml +4 -4
- data/CHANGELOG.md +22 -7
- data/Gemfile.lock +17 -17
- data/bolognese.gemspec +1 -1
- data/lib/bolognese/doi_utils.rb +8 -8
- data/lib/bolognese/readers/crossref_reader.rb +1 -1
- data/lib/bolognese/readers/datacite_reader.rb +1 -1
- data/lib/bolognese/readers/schema_org_reader.rb +2 -2
- data/lib/bolognese/utils.rb +9 -9
- data/lib/bolognese/version.rb +1 -1
- data/spec/author_utils_spec.rb +12 -6
- data/spec/cli_spec.rb +9 -8
- data/spec/datacite_utils_spec.rb +3 -3
- data/spec/doi_utils_spec.rb +17 -17
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/default.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_bibtex.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_citation.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_crossref.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_datacite.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_jats.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_schema_org.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/default.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_bibtex.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_citation.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite_json.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_jats.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_schema_org.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/default.yml +28 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_datacite.yml +28 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_schema_org.yml +29 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/crossref.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/datacite.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/jalc.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/kisti.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/medra.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/op.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/author.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/no_author.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/single_author.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/with_organization.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_state.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_title.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_description.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_identifiers.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license_name.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license_url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_state.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/validates_against_schema.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/doi.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/doi_with_protocol.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/dx_doi_org_url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/force_test_resolver.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/https_url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/test_resolver.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/test_resolver_http.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi_with_special_characters.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/not_a_doi.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/sandbox_url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/crossref.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/datacite.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/jalc.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/kisti.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/medra.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_a_valid_prefix.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_found.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/op.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi_with_protocol.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/dx_doi_org_url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/{test_resolver_http.yml → force_stage_resolver.yml} +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/https_url.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/stage_resolver.yml +48 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/{force_test_resolver.yml → stage_resolver_http.yml} +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref.yml +53 -47
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +53 -47
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite.yml +52 -46
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite_doi_http.yml +52 -46
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/github.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/orcid.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/schema_org.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +53 -47
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/bibtex.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/citeproc.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/codemeta.yml +34 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crosscite.yml +34 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crossref.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite.yml +34 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite_json.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/ris.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/schema_org.yml +34 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_string/crosscite.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_for_match.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +48 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_match.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_no_match.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_for_match.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_match.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_no_match.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org/with_id.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org_creators/with_affiliation.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org_creators/without_affiliation.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/maremma.yml +20 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/metadata_reports.yml +20 -37
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/JaLC.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/KISTI.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/OP.yml +28 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/affiliation_is_space.yml +24 -23
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book_chapter.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/article_id_as_page_number.yml +23 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/author_literal.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book.yml +28 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_chapter.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_chapter_with_RDF_for_container.yml +29 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_oup.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/component.yml +28 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset.yml +28 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset_usda.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/date_in_future.yml +28 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dissertation.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/empty_given_name.yml +29 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/invalid_date.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article_original_language_title.yml +30 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article_with.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article_with_RDF_for_container.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article_with_funding.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_issue.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/mEDRA.yml +29 -60
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/markup.yml +31 -23
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/missing_creator.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/multiple_issn.yml +25 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/multiple_titles.yml +28 -21
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/multiple_titles_with_missing.yml +23 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/not_found_error.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/peer_review.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/posted_content.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/posted_content_copernicus.yml +32 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/report_osti.yml +37 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/vor_with_url.yml +27 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/yet_another_book.yml +30 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/yet_another_book_chapter.yml +26 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_json_metadata/metadata_from_api.yml +34 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/BlogPosting.yml +35 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_in_staging_system.yml +106 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_in_staging_system_schema_3.yml +106 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_in_with_related_id_system.yml +34 -41
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_not_found.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Dataset.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Funding.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Funding_empty_awardTitle.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Funding_schema_version_4.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Referee_report_in_staging_system.yml +106 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Schema_org_type.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/author_only_full_name.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/author_with_scheme.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/author_with_wrong_orcid_scheme.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/cc-by_3_0_us.yml +34 -32
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/content_url.yml +35 -33
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/date.yml +34 -48
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/dissertation.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/doi_with_sign.yml +34 -28
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/empty_subject.yml +35 -28
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/even_more_subject_scheme_FOR.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/funding_references.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/funding_schema_version_3.yml +34 -51
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/is_identical_to.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/keywords_with_attributes.yml +35 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/leading_and_trailing_whitespace.yml +34 -53
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/more_subject_scheme_FOR.yml +35 -37
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_author_names_in_one_creatorsName.yml +34 -33
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_licenses.yml +35 -52
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/series-information.yml +34 -25
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/subject_scheme.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/subject_scheme_FOR.yml +35 -46
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date/publication_date.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_date_parts/date.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_date_parts/year-month.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_date_parts/year.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_parts/date.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_parts/year-month.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_parts/year.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_parts/date.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_parts/year-month.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_parts/year.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datetime_from_time/future.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datetime_from_time/invalid.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datetime_from_time/nil.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datetime_from_time/past.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datetime_from_time/present.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_familyName.yml +16 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_name_in_Thai.yml +16 -10
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/name_with_affiliation_and_country.yml +79 -40
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_schema_org_metadata/BlogPosting_with_new_DOI.yml +28 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_schema_org_metadata/harvard_dataverse.yml +14 -12
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/github/github_from_url_file.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/handle_input/DOI_RA_not_Crossref_or_DataCite.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/handle_input/unknown_DOI_prefix.yml +18 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_contributors/none.yml +16 -10
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_person/creator_only_name.yml +15 -9
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_resource_type/insert.yml +15 -9
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_titles/insert.yml +15 -9
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_known_given_name.yml +9 -5
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/jsonlint/valid.yml +35 -32
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- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/with_editor.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/with_version.yml +17 -26
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/Dataset_in_schema_4_0.yml +16 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/Text_pass-thru.yml +17 -43
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/book_chapter.yml +8 -4
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/interactive_resource_without_dates.yml +16 -13
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/maremma.yml +20 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_ORCID_ID.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_data_citation.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_data_citation_schema_org.yml +30 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_editor.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_rdf_xml/BlogPosting.yml +16 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_rdf_xml/BlogPosting_schema_org.yml +28 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_rdf_xml/journal_article.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_rdf_xml/maremma.yml +20 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_rdf_xml/with_pages.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/BlogPosting.yml +16 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/BlogPosting_schema_org.yml +28 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/Dataset.yml +16 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/alternate_name.yml +16 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/journal_article.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/keywords_with_subject_scheme.yml +16 -87
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/maremma.yml +20 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/with_pages.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Funding.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +35 -52
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +16 -36
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_Cyark.yml +34 -48
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +33 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_isReferencedBy.yml +16 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/alternate_identifiers.yml +17 -18
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/data_catalog.yml +16 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/geo_location_box.yml +17 -68
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/interactive_resource_without_dates.yml +17 -14
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/journal_article.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +20 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/series_information.yml +15 -9
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/subject_scheme.yml +16 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/subject_scheme_multiple_keywords.yml +16 -87
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting.yml +17 -17
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting_schema_org.yml +30 -24
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/Dataset.yml +16 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/journal_article.yml +9 -5
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/with_pages.yml +9 -5
- data/spec/readers/crossref_reader_spec.rb +284 -23
- data/spec/readers/datacite_reader_spec.rb +64 -27
- data/spec/readers/schema_org_reader_spec.rb +4 -6
- data/spec/utils_spec.rb +17 -4
- data/spec/writers/bibtex_writer_spec.rb +4 -6
- data/spec/writers/citeproc_writer_spec.rb +3 -3
- data/spec/writers/csv_writer_spec.rb +1 -1
- data/spec/writers/datacite_writer_spec.rb +1 -1
- data/spec/writers/jats_writer_spec.rb +1 -1
- data/spec/writers/rdf_xml_writer_spec.rb +1 -1
- data/spec/writers/ris_writer_spec.rb +10 -8
- data/spec/writers/schema_org_writer_spec.rb +4 -4
- data/spec/writers/turtle_writer_spec.rb +1 -1
- metadata +22 -12
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_bibtex.yml +0 -111
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_alternate_identifiers.yml +0 -51
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_in_test_system.yml +0 -104
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_in_test_system_schema_3.yml +0 -99
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Referee_report_in_test_system.yml +0 -102
checksums.yaml
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data.tar.gz: 30e8c160beaa72788aaf6bf6c05148a4705a6085b375b180ead2ac3009b5b15567a544ae758bb5ad430d95eebdac739a75933c02609e401958ee62aa0b4821fc
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201
|
addressable (>= 2.3.6)
|
202
202
|
crack (>= 0.3.2)
|
203
203
|
hashdiff (>= 0.4.0, < 2.0.0)
|
@@ -219,4 +219,4 @@ DEPENDENCIES
|
|
219
219
|
webmock (~> 3.0, >= 3.0.1)
|
220
220
|
|
221
221
|
BUNDLED WITH
|
222
|
-
2.2.
|
222
|
+
2.2.19
|
data/bolognese.gemspec
CHANGED
@@ -16,7 +16,7 @@ Gem::Specification.new do |s|
|
|
16
16
|
s.required_ruby_version = '~> 2.3'
|
17
17
|
|
18
18
|
# Declare dependencies here, rather than in the Gemfile
|
19
|
-
s.add_dependency 'maremma', '>= 4.
|
19
|
+
s.add_dependency 'maremma', '>= 4.9.4', '< 5'
|
20
20
|
s.add_dependency 'faraday', '~> 0.17.3'
|
21
21
|
s.add_dependency 'nokogiri', '~> 1.11.2'
|
22
22
|
s.add_dependency 'loofah', '~> 2.0', '>= 2.0.3'
|
data/lib/bolognese/doi_utils.rb
CHANGED
@@ -3,13 +3,13 @@
|
|
3
3
|
module Bolognese
|
4
4
|
module DoiUtils
|
5
5
|
def validate_doi(doi)
|
6
|
-
doi = Array(/\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.test.datacite.org)\/)?(doi:)?(10\.\d{4,5}\/.+)\z/.match(doi)).last
|
6
|
+
doi = Array(/\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.stage.datacite.org|handle.test.datacite.org)\/)?(doi:)?(10\.\d{4,5}\/.+)\z/.match(doi)).last
|
7
7
|
# remove non-printing whitespace and downcase
|
8
8
|
doi.delete("\u200B").downcase if doi.present?
|
9
9
|
end
|
10
10
|
|
11
11
|
def validate_funder_doi(doi)
|
12
|
-
doi = Array(/\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.test.datacite.org)\/)?(doi:)?(10\.13039\/)?([1-9]\d+)\z/.match(doi)).last
|
12
|
+
doi = Array(/\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.stage.datacite.org|handle.test.datacite.org)\/)?(doi:)?(10\.13039\/)?([1-9]\d+)\z/.match(doi)).last
|
13
13
|
|
14
14
|
# remove non-printing whitespace and downcase
|
15
15
|
if doi.present?
|
@@ -19,17 +19,17 @@ module Bolognese
|
|
19
19
|
end
|
20
20
|
|
21
21
|
def validate_prefix(doi)
|
22
|
-
Array(/\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.test.datacite.org)\/)?(doi:)?(10\.\d{4,5}).*\z/.match(doi)).last
|
22
|
+
Array(/\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.stage.datacite.org|handle.test.datacite.org)\/)?(doi:)?(10\.\d{4,5}).*\z/.match(doi)).last
|
23
23
|
end
|
24
24
|
|
25
25
|
def doi_resolver(doi, options = {})
|
26
|
-
sandbox = Array(/handle.
|
27
|
-
sandbox.present? || options[:sandbox] ? "https://handle.
|
26
|
+
sandbox = Array(/handle.stage.datacite.org/.match(doi)).last
|
27
|
+
sandbox.present? || options[:sandbox] ? "https://handle.stage.datacite.org/" : "https://doi.org/"
|
28
28
|
end
|
29
29
|
|
30
30
|
def doi_api_url(doi, options = {})
|
31
|
-
sandbox = Array(/handle.
|
32
|
-
sandbox.present? || options[:sandbox] ? "https://api.
|
31
|
+
sandbox = Array(/handle.stage.datacite.org/.match(doi)).last
|
32
|
+
sandbox.present? || options[:sandbox] ? "https://api.stage.datacite.org/dois/#{doi_from_url(doi)}?include=media,client" : "https://api.datacite.org/dois/#{doi_from_url(doi)}?include=media,client"
|
33
33
|
end
|
34
34
|
|
35
35
|
def normalize_doi(doi, options = {})
|
@@ -41,7 +41,7 @@ module Bolognese
|
|
41
41
|
end
|
42
42
|
|
43
43
|
def doi_from_url(url)
|
44
|
-
if /\A(?:(http|https):\/\/(dx\.)?(doi.org|handle.test.datacite.org)\/)?(doi:)?(10\.\d{4,5}\/.+)\z/.match(url)
|
44
|
+
if /\A(?:(http|https):\/\/(dx\.)?(doi.org|handle.stage.datacite.org|handle.test.datacite.org)\/)?(doi:)?(10\.\d{4,5}\/.+)\z/.match(url)
|
45
45
|
uri = Addressable::URI.parse(url)
|
46
46
|
uri.path.gsub(/^\//, '').downcase
|
47
47
|
end
|
@@ -9,7 +9,7 @@ module Bolognese
|
|
9
9
|
|
10
10
|
doi = doi_from_url(id)
|
11
11
|
url = "https://api.crossref.org/works/#{doi}/transform/application/vnd.crossref.unixsd+xml"
|
12
|
-
response = Maremma.get(url, accept: "text/xml", raw: true)
|
12
|
+
response = Maremma.get(url, accept: "text/xml;charset=utf-8", raw: true)
|
13
13
|
string = response.body.fetch("data", nil)
|
14
14
|
string = Nokogiri::XML(string, nil, 'UTF-8', &:noblanks).to_s if string.present?
|
15
15
|
|
@@ -7,7 +7,7 @@ module Bolognese
|
|
7
7
|
return { "string" => nil, "state" => "not_found" } unless id.present?
|
8
8
|
|
9
9
|
api_url = doi_api_url(id, options)
|
10
|
-
response = Maremma.get
|
10
|
+
response = Maremma.get(api_url)
|
11
11
|
attributes = response.body.dig("data", "attributes")
|
12
12
|
return { "string" => nil, "state" => "not_found" } unless attributes.present?
|
13
13
|
|
@@ -26,8 +26,8 @@ module Bolognese
|
|
26
26
|
def get_schema_org(id: nil, **options)
|
27
27
|
return { "string" => nil, "state" => "not_found" } unless id.present?
|
28
28
|
|
29
|
-
|
30
|
-
response = Maremma.get(
|
29
|
+
url = normalize_id(id)
|
30
|
+
response = Maremma.get(url)
|
31
31
|
doc = Nokogiri::XML(response.body.fetch("data", nil), nil, 'UTF-8')
|
32
32
|
|
33
33
|
# workaround for xhtml documents
|
data/lib/bolognese/utils.rb
CHANGED
@@ -386,8 +386,8 @@ module Bolognese
|
|
386
386
|
"BookChapter" => "CHAP",
|
387
387
|
"Collection" => nil,
|
388
388
|
"ComputationalNotebook" => "COMP",
|
389
|
-
"ConferencePaper" =>
|
390
|
-
"ConferenceProceeding" =>
|
389
|
+
"ConferencePaper" => "CPAPER",
|
390
|
+
"ConferenceProceeding" => "CONF",
|
391
391
|
"DataPaper" => nil,
|
392
392
|
"Dataset" => "DATA",
|
393
393
|
"Dissertation" => "THES",
|
@@ -499,7 +499,7 @@ module Bolognese
|
|
499
499
|
def find_from_format_by_id(id)
|
500
500
|
id = normalize_id(id)
|
501
501
|
|
502
|
-
if /\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.
|
502
|
+
if /\A(?:(http|https):\/(\/)?(dx\.)?(doi.org|handle.stage.datacite.org)\/)?(doi:)?(10\.\d{4,5}\/.+)\z/.match(id)
|
503
503
|
ra = get_doi_ra(id)
|
504
504
|
%w(DataCite Crossref mEDRA KISTI JaLC OP).include?(ra) ? ra.downcase : nil
|
505
505
|
elsif /\A(?:(http|https):\/(\/)?orcid\.org\/)?(\d{4}-\d{4}-\d{4}-\d{3}[0-9X]+)\z/.match(id)
|
@@ -1306,8 +1306,8 @@ module Bolognese
|
|
1306
1306
|
return [{
|
1307
1307
|
"subject" => sanitize(hsh["__content__"] || hsh["subject"]),
|
1308
1308
|
"subjectScheme" => hsh["subjectScheme"],
|
1309
|
-
"schemeUri" => hsh["schemeURI"] || hsh["
|
1310
|
-
"valueUri" => hsh["valueURI"] || hsh["
|
1309
|
+
"schemeUri" => hsh["schemeURI"] || hsh["schemeUri"],
|
1310
|
+
"valueUri" => hsh["valueURI"] || hsh["valueUri"],
|
1311
1311
|
"classificationCode" => hsh["classificationCode"],
|
1312
1312
|
"lang" => hsh["lang"] }.compact,
|
1313
1313
|
{
|
@@ -1339,8 +1339,8 @@ module Bolognese
|
|
1339
1339
|
"subject" => sanitize(hsh["__content__"] || hsh["subject"]),
|
1340
1340
|
"subjectScheme" => hsh["subjectScheme"],
|
1341
1341
|
"classificationCode" => hsh["classificationCode"],
|
1342
|
-
"schemeUri" => hsh["schemeURI"] || hsh["
|
1343
|
-
"valueUri" => hsh["valueURI"] || hsh["
|
1342
|
+
"schemeUri" => hsh["schemeURI"] || hsh["schemeUri"],
|
1343
|
+
"valueUri" => hsh["valueURI"] || hsh["valueUri"],
|
1344
1344
|
"lang" => hsh["lang"] }.compact,
|
1345
1345
|
{
|
1346
1346
|
"subject" => "FOS: " + subject["fosLabel"],
|
@@ -1352,8 +1352,8 @@ module Bolognese
|
|
1352
1352
|
"subject" => sanitize(hsh["__content__"] || hsh["subject"]),
|
1353
1353
|
"subjectScheme" => hsh["subjectScheme"],
|
1354
1354
|
"classificationCode" => hsh["classificationCode"],
|
1355
|
-
"schemeUri" => hsh["schemeURI"] || hsh["
|
1356
|
-
"valueUri" => hsh["valueURI"] || hsh["
|
1355
|
+
"schemeUri" => hsh["schemeURI"] || hsh["schemeUri"],
|
1356
|
+
"valueUri" => hsh["valueURI"] || hsh["valueUri"],
|
1357
1357
|
"lang" => hsh["lang"] }.compact]
|
1358
1358
|
end
|
1359
1359
|
end
|
data/lib/bolognese/version.rb
CHANGED
data/spec/author_utils_spec.rb
CHANGED
@@ -117,10 +117,11 @@ describe Bolognese::Metadata, vcr: true do
|
|
117
117
|
|
118
118
|
it "name with affiliation and country" do
|
119
119
|
input = "10.16910/jemr.9.1.2"
|
120
|
-
subject = Bolognese::Metadata.new(input: input, from: "
|
121
|
-
|
122
|
-
response
|
123
|
-
|
120
|
+
subject = Bolognese::Metadata.new(input: input, from: "crossref")
|
121
|
+
response = subject.get_one_author(subject.creators.first)
|
122
|
+
expect(response).to eq("familyName" => "Eraslan",
|
123
|
+
"givenName" => "Sukru",
|
124
|
+
"name" => "Eraslan, Sukru")
|
124
125
|
end
|
125
126
|
|
126
127
|
it "name with role" do
|
@@ -128,7 +129,12 @@ describe Bolognese::Metadata, vcr: true do
|
|
128
129
|
subject = Bolognese::Metadata.new(input: input, from: "datacite")
|
129
130
|
meta = Maremma.from_xml(subject.raw).fetch("resource", {})
|
130
131
|
response = subject.get_one_author(meta.dig("creators", "creator").first)
|
131
|
-
expect(response).to eq("
|
132
|
+
expect(response).to eq("affiliation" => [],
|
133
|
+
"familyName" => "Schumacher",
|
134
|
+
"givenName" => "Heinrich Christian",
|
135
|
+
"name" => "Schumacher, Heinrich Christian",
|
136
|
+
"nameIdentifiers" => [{"nameIdentifier"=>"http://d-nb.info/gnd/118611593", "nameIdentifierScheme"=>"GND", "schemeUri"=>"http://d-nb.info/gnd/"}],
|
137
|
+
"nameType" => "Personal")
|
132
138
|
end
|
133
139
|
|
134
140
|
it "multiple name_identifier" do
|
@@ -167,7 +173,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
167
173
|
|
168
174
|
it "author" do
|
169
175
|
response = subject.authors_as_string(subject.creators)
|
170
|
-
expect(response).to eq("Fenner, Martin and Crosas,
|
176
|
+
expect(response).to eq("Fenner, Martin and Crosas, Merc?? and Grethe, Jeffrey and Kennedy, David and Hermjakob, Henning and Rocca-Serra, Philippe and Durand, Gustavo and Berjon, Robin and Karcher, Sebastian and Martone, Maryann and Clark, Timothy")
|
171
177
|
end
|
172
178
|
|
173
179
|
it "single author" do
|
data/spec/cli_spec.rb
CHANGED
@@ -51,12 +51,12 @@ describe Bolognese::CLI do
|
|
51
51
|
let(:input) { "10.5061/dryad.8515" }
|
52
52
|
|
53
53
|
it 'default' do
|
54
|
-
expect { subject.convert input }.to output(/Plasmodium, malaria, taxonomy, mitochondrial genome,
|
54
|
+
expect { subject.convert input }.to output(/Plasmodium, malaria, taxonomy, mitochondrial genome, Parasites/).to_stdout
|
55
55
|
end
|
56
56
|
|
57
57
|
it 'to schema_org' do
|
58
58
|
subject.options = { to: "schema_org" }
|
59
|
-
expect { subject.convert input }.to output(/
|
59
|
+
expect { subject.convert input }.to output(/http:\/\/schema.org/).to_stdout
|
60
60
|
end
|
61
61
|
|
62
62
|
it 'to bibtex' do
|
@@ -89,12 +89,12 @@ describe Bolognese::CLI do
|
|
89
89
|
let(:id) { "https://blog.datacite.org/eating-your-own-dog-food" }
|
90
90
|
|
91
91
|
it 'default' do
|
92
|
-
expect { subject.convert id }.to output(/
|
92
|
+
expect { subject.convert id }.to output(/http:\/\/schema.org/).to_stdout
|
93
93
|
end
|
94
94
|
|
95
95
|
it 'to schema_org' do
|
96
96
|
subject.options = { to: "schema_org" }
|
97
|
-
expect { subject.convert id }.to output(/
|
97
|
+
expect { subject.convert id }.to output(/http:\/\/schema.org/).to_stdout
|
98
98
|
end
|
99
99
|
|
100
100
|
it 'to datacite' do
|
@@ -102,10 +102,11 @@ describe Bolognese::CLI do
|
|
102
102
|
expect { subject.convert id }.to output(/http:\/\/datacite.org\/schema\/kernel-4/).to_stdout
|
103
103
|
end
|
104
104
|
|
105
|
-
|
106
|
-
|
107
|
-
|
108
|
-
|
105
|
+
# TODO
|
106
|
+
# it 'to bibtex' do
|
107
|
+
# subject.options = { to: "bibtex" }
|
108
|
+
# expect { subject.convert id }.to output(/@article{https:\/\/doi.org\/10.5438\/4k3m-nyvg/).to_stdout
|
109
|
+
# end
|
109
110
|
end
|
110
111
|
end
|
111
112
|
|
data/spec/datacite_utils_spec.rb
CHANGED
@@ -101,7 +101,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
101
101
|
it "insert" do
|
102
102
|
xml = Nokogiri::XML::Builder.new(:encoding => 'UTF-8') { |xml| subject.insert_subjects(xml) }.to_xml
|
103
103
|
response = Maremma.from_xml(xml)
|
104
|
-
expect(response.dig("subjects", "subject")).to eq(["Plasmodium", "malaria", "taxonomy", "mitochondrial genome", "
|
104
|
+
expect(response.dig("subjects", "subject")).to eq(["Plasmodium", "malaria", "taxonomy", "mitochondrial genome", "Parasites"])
|
105
105
|
end
|
106
106
|
end
|
107
107
|
|
@@ -144,13 +144,13 @@ describe Bolognese::Metadata, vcr: true do
|
|
144
144
|
context "insert_related_identifiers" do
|
145
145
|
it "related_identifier" do
|
146
146
|
expect(subject.related_identifiers.length).to eq(1)
|
147
|
-
expect(subject.related_identifiers.first).to eq("relatedIdentifier"=>"10.1371/journal.ppat.1000446", "relatedIdentifierType"=>"DOI", "relationType"=>"
|
147
|
+
expect(subject.related_identifiers.first).to eq("relatedIdentifier"=>"10.1371/journal.ppat.1000446", "relatedIdentifierType"=>"DOI", "relationType"=>"Cites")
|
148
148
|
end
|
149
149
|
|
150
150
|
it "insert" do
|
151
151
|
xml = Nokogiri::XML::Builder.new(:encoding => 'UTF-8') { |xml| subject.insert_related_identifiers(xml) }.to_xml
|
152
152
|
response = Maremma.from_xml(xml)
|
153
|
-
expect(response.dig("relatedIdentifiers", "relatedIdentifier")).to eq("__content__"=>"10.1371/journal.ppat.1000446", "relatedIdentifierType"=>"DOI", "relationType"=>"
|
153
|
+
expect(response.dig("relatedIdentifiers", "relatedIdentifier")).to eq("__content__"=>"10.1371/journal.ppat.1000446", "relatedIdentifierType"=>"DOI", "relationType"=>"Cites")
|
154
154
|
end
|
155
155
|
end
|
156
156
|
|