bolognese 1.11.4 → 2.7.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (605) hide show
  1. checksums.yaml +4 -4
  2. data/.github/workflows/ci.yml +1 -1
  3. data/.github/workflows/release.yml +2 -2
  4. data/Gemfile +1 -1
  5. data/Gemfile.lock +199 -166
  6. data/README.md +1 -1
  7. data/bolognese.gemspec +30 -36
  8. data/lib/bolognese/author_utils.rb +6 -48
  9. data/lib/bolognese/citeproc_extensions.rb +48 -0
  10. data/lib/bolognese/datacite_utils.rb +27 -9
  11. data/lib/bolognese/doi_utils.rb +4 -3
  12. data/lib/bolognese/metadata.rb +9 -11
  13. data/lib/bolognese/metadata_utils.rb +21 -6
  14. data/lib/bolognese/readers/bibtex_reader.rb +2 -2
  15. data/lib/bolognese/readers/citeproc_reader.rb +8 -2
  16. data/lib/bolognese/readers/codemeta_reader.rb +3 -3
  17. data/lib/bolognese/readers/crosscite_reader.rb +4 -1
  18. data/lib/bolognese/readers/crossref_reader.rb +53 -8
  19. data/lib/bolognese/readers/datacite_json_reader.rb +4 -1
  20. data/lib/bolognese/readers/datacite_reader.rb +41 -51
  21. data/lib/bolognese/readers/npm_reader.rb +1 -1
  22. data/lib/bolognese/readers/ris_reader.rb +3 -3
  23. data/lib/bolognese/readers/schema_org_reader.rb +28 -5
  24. data/lib/bolognese/utils.rb +128 -124
  25. data/lib/bolognese/version.rb +1 -1
  26. data/lib/bolognese/writers/bibtex_writer.rb +1 -1
  27. data/lib/bolognese/writers/codemeta_writer.rb +1 -1
  28. data/lib/bolognese/writers/csv_writer.rb +3 -5
  29. data/lib/bolognese/writers/datacite_json_writer.rb +3 -1
  30. data/lib/bolognese/writers/jats_writer.rb +9 -5
  31. data/lib/bolognese/writers/ris_writer.rb +1 -1
  32. data/lib/bolognese/writers/schema_org_writer.rb +5 -1
  33. data/lib/bolognese.rb +1 -4
  34. data/resources/kernel-4/include/datacite-contributorType-v4.xsd +3 -1
  35. data/resources/kernel-4/include/datacite-dateType-v4.xsd +3 -1
  36. data/resources/kernel-4/include/datacite-relatedIdentifierType-v4.xsd +7 -2
  37. data/resources/kernel-4/include/datacite-relationType-v4.xsd +11 -3
  38. data/resources/kernel-4/include/datacite-resourceType-v4.xsd +10 -1
  39. data/resources/kernel-4/include/datacite-titleType-v4.xsd +1 -1
  40. data/resources/kernel-4/metadata.xsd +15 -7
  41. data/resources/kernel-4.5/include/datacite-contributorType-v4.xsd +35 -0
  42. data/resources/kernel-4.5/include/datacite-dateType-v4.xsd +25 -0
  43. data/resources/kernel-4.5/include/datacite-descriptionType-v4.xsd +19 -0
  44. data/resources/kernel-4.5/include/datacite-funderIdentifierType-v4.xsd +16 -0
  45. data/resources/kernel-4.5/include/datacite-nameType-v4.xsd +10 -0
  46. data/resources/kernel-4.5/include/datacite-numberType-v4.xsd +12 -0
  47. data/resources/kernel-4.5/include/datacite-relatedIdentifierType-v4.xsd +34 -0
  48. data/resources/kernel-4.5/include/datacite-relationType-v4.xsd +53 -0
  49. data/resources/kernel-4.5/include/datacite-resourceType-v4.xsd +45 -0
  50. data/resources/kernel-4.5/include/datacite-titleType-v4.xsd +14 -0
  51. data/resources/kernel-4.5/include/xml.xsd +286 -0
  52. data/resources/kernel-4.5/metadata.xsd +711 -0
  53. data/resources/kernel-4.6/include/datacite-contributorType-v4.xsd +37 -0
  54. data/resources/kernel-4.6/include/datacite-dateType-v4.xsd +27 -0
  55. data/resources/kernel-4.6/include/datacite-descriptionType-v4.xsd +19 -0
  56. data/resources/kernel-4.6/include/datacite-funderIdentifierType-v4.xsd +16 -0
  57. data/resources/kernel-4.6/include/datacite-nameType-v4.xsd +10 -0
  58. data/resources/kernel-4.6/include/datacite-numberType-v4.xsd +12 -0
  59. data/resources/kernel-4.6/include/datacite-relatedIdentifierType-v4.xsd +37 -0
  60. data/resources/kernel-4.6/include/datacite-relationType-v4.xsd +57 -0
  61. data/resources/kernel-4.6/include/datacite-resourceType-v4.xsd +49 -0
  62. data/resources/kernel-4.6/include/datacite-titleType-v4.xsd +14 -0
  63. data/resources/kernel-4.6/include/xml.xsd +286 -0
  64. data/resources/kernel-4.6/metadata.xsd +712 -0
  65. data/resources/kernel-4.7/include/datacite-contributorType-v4.xsd +37 -0
  66. data/resources/kernel-4.7/include/datacite-dateType-v4.xsd +27 -0
  67. data/resources/kernel-4.7/include/datacite-descriptionType-v4.xsd +19 -0
  68. data/resources/kernel-4.7/include/datacite-funderIdentifierType-v4.xsd +16 -0
  69. data/resources/kernel-4.7/include/datacite-nameType-v4.xsd +10 -0
  70. data/resources/kernel-4.7/include/datacite-numberType-v4.xsd +12 -0
  71. data/resources/kernel-4.7/include/datacite-relatedIdentifierType-v4.xsd +39 -0
  72. data/resources/kernel-4.7/include/datacite-relationType-v4.xsd +59 -0
  73. data/resources/kernel-4.7/include/datacite-resourceType-v4.xsd +52 -0
  74. data/resources/kernel-4.7/include/datacite-titleType-v4.xsd +14 -0
  75. data/resources/kernel-4.7/include/xml.xsd +286 -0
  76. data/resources/kernel-4.7/metadata.xsd +715 -0
  77. metadata +159 -718
  78. data/spec/array_spec.rb +0 -22
  79. data/spec/author_utils_spec.rb +0 -253
  80. data/spec/cli_spec.rb +0 -226
  81. data/spec/datacite_utils_spec.rb +0 -207
  82. data/spec/doi_utils_spec.rb +0 -314
  83. data/spec/find_from_format_spec.rb +0 -114
  84. data/spec/fixtures/aida.json +0 -82
  85. data/spec/fixtures/cgimp_package.json +0 -18
  86. data/spec/fixtures/cit_package.json +0 -19
  87. data/spec/fixtures/citeproc-no-author.json +0 -26
  88. data/spec/fixtures/citeproc-no-categories.json +0 -21
  89. data/spec/fixtures/citeproc.json +0 -32
  90. data/spec/fixtures/codemeta.json +0 -86
  91. data/spec/fixtures/codemeta_v2.json +0 -86
  92. data/spec/fixtures/crosscite.json +0 -63
  93. data/spec/fixtures/crossref.bib +0 -14
  94. data/spec/fixtures/crossref.ris +0 -15
  95. data/spec/fixtures/crossref.xml +0 -606
  96. data/spec/fixtures/datacite-empty-sizes.xml +0 -57
  97. data/spec/fixtures/datacite-example-ROR-nameIdentifiers.xml +0 -117
  98. data/spec/fixtures/datacite-example-affiliation.xml +0 -114
  99. data/spec/fixtures/datacite-example-ancientdates-v4.3.xml +0 -29
  100. data/spec/fixtures/datacite-example-complicated-tba.xml +0 -56
  101. data/spec/fixtures/datacite-example-complicated-v3.0.xml +0 -48
  102. data/spec/fixtures/datacite-example-complicated-v4.0.xml +0 -54
  103. data/spec/fixtures/datacite-example-complicated-v4.1.xml +0 -57
  104. data/spec/fixtures/datacite-example-dissertation-v4.4.xml +0 -56
  105. data/spec/fixtures/datacite-example-escaped-text.xml +0 -56
  106. data/spec/fixtures/datacite-example-full-v4.4.xml +0 -114
  107. data/spec/fixtures/datacite-example-geolocation-2.xml +0 -141
  108. data/spec/fixtures/datacite-example-geolocation.xml +0 -66
  109. data/spec/fixtures/datacite-example-nameIdentifier-with-schemeURI.xml +0 -94
  110. data/spec/fixtures/datacite-example-polygon-v4.1.xml +0 -163
  111. data/spec/fixtures/datacite-example-relateditems-with-attributes.xml +0 -61
  112. data/spec/fixtures/datacite-example-relateditems.xml +0 -61
  113. data/spec/fixtures/datacite-example-xs-string.xml +0 -28
  114. data/spec/fixtures/datacite-formats-with-xs.xml +0 -22
  115. data/spec/fixtures/datacite-funderIdentifier.xml +0 -98
  116. data/spec/fixtures/datacite-geolocation-empty.xml +0 -159
  117. data/spec/fixtures/datacite-geolocationpolygons-multiple.xml +0 -76
  118. data/spec/fixtures/datacite-metadata-sample-complicated-v2.2.xml +0 -52
  119. data/spec/fixtures/datacite-multiple-language.xml +0 -38
  120. data/spec/fixtures/datacite-multiple-rights.xml +0 -59
  121. data/spec/fixtures/datacite-schema-2.2.xml +0 -80
  122. data/spec/fixtures/datacite-seriesinformation.xml +0 -41
  123. data/spec/fixtures/datacite-space-in-sizes.xml +0 -52
  124. data/spec/fixtures/datacite-xml-lang.xml +0 -51
  125. data/spec/fixtures/datacite.json +0 -89
  126. data/spec/fixtures/datacite.xml +0 -40
  127. data/spec/fixtures/datacite_dataset.xml +0 -58
  128. data/spec/fixtures/datacite_malformed_creator.xml +0 -52
  129. data/spec/fixtures/datacite_missing_creator.xml +0 -33
  130. data/spec/fixtures/datacite_schema_3.xml +0 -58
  131. data/spec/fixtures/datacite_software.json +0 -21
  132. data/spec/fixtures/datacite_software_missing_comma.json +0 -18
  133. data/spec/fixtures/datacite_software_overlapping_keys.json +0 -18
  134. data/spec/fixtures/datacite_software_version.json +0 -74
  135. data/spec/fixtures/edam_package.json +0 -12
  136. data/spec/fixtures/funding_reference.xml +0 -53
  137. data/spec/fixtures/gtex.xml +0 -71
  138. data/spec/fixtures/maremma/codemeta.json +0 -36
  139. data/spec/fixtures/nist.xml +0 -35
  140. data/spec/fixtures/ns0.xml +0 -2
  141. data/spec/fixtures/pure.bib +0 -14
  142. data/spec/fixtures/pure.ris +0 -15
  143. data/spec/fixtures/pure.xml +0 -188
  144. data/spec/fixtures/ris_bug.ris +0 -9
  145. data/spec/fixtures/schema_4.0.xml +0 -140
  146. data/spec/fixtures/schema_org.json +0 -49
  147. data/spec/fixtures/schema_org_geolocation.json +0 -82
  148. data/spec/fixtures/schema_org_geoshape.json +0 -550
  149. data/spec/fixtures/schema_org_gtex.json +0 -75
  150. data/spec/fixtures/schema_org_list.json +0 -12623
  151. data/spec/fixtures/schema_org_tdl_iodp_invalid_authors.json +0 -25
  152. data/spec/fixtures/schema_org_topmed.json +0 -53
  153. data/spec/fixtures/schema_org_type_as_array.json +0 -41
  154. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/default.yml +0 -106
  155. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_bibtex.yml +0 -106
  156. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_citation.yml +0 -106
  157. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_crossref.yml +0 -106
  158. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_datacite.yml +0 -106
  159. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_jats.yml +0 -106
  160. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_schema_org.yml +0 -106
  161. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/default.yml +0 -106
  162. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_bibtex.yml +0 -106
  163. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_citation.yml +0 -106
  164. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite.yml +0 -106
  165. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite_json.yml +0 -106
  166. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_jats.yml +0 -106
  167. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_schema_org.yml +0 -106
  168. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/default.yml +0 -117
  169. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_datacite.yml +0 -117
  170. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_schema_org.yml +0 -115
  171. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/crossref.yml +0 -54
  172. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/datacite.yml +0 -54
  173. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/jalc.yml +0 -54
  174. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/kisti.yml +0 -54
  175. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/medra.yml +0 -54
  176. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/find_from_format_by_id/op.yml +0 -54
  177. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/author.yml +0 -48
  178. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/no_author.yml +0 -48
  179. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/single_author.yml +0 -48
  180. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/with_organization.yml +0 -48
  181. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_state.yml +0 -106
  182. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_title.yml +0 -106
  183. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_description.yml +0 -55
  184. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_identifiers.yml +0 -55
  185. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license.yml +0 -55
  186. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license_name.yml +0 -55
  187. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_license_url.yml +0 -55
  188. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/change_state.yml +0 -55
  189. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/validates_against_schema.yml +0 -55
  190. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +0 -55
  191. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/doi.yml +0 -48
  192. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/doi_with_protocol.yml +0 -48
  193. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/dx_doi_org_url.yml +0 -48
  194. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/force_test_resolver.yml +0 -48
  195. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/https_url.yml +0 -48
  196. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/test_resolver.yml +0 -48
  197. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_api_url/test_resolver_http.yml +0 -48
  198. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi.yml +0 -48
  199. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi_with_special_characters.yml +0 -48
  200. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/not_a_doi.yml +0 -48
  201. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/sandbox_url.yml +0 -48
  202. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/url.yml +0 -48
  203. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/crossref.yml +0 -99
  204. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/datacite.yml +0 -99
  205. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/jalc.yml +0 -99
  206. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/kisti.yml +0 -99
  207. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/medra.yml +0 -99
  208. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_a_valid_prefix.yml +0 -48
  209. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_found.yml +0 -99
  210. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/op.yml +0 -99
  211. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi.yml +0 -48
  212. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi_with_protocol.yml +0 -48
  213. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/dx_doi_org_url.yml +0 -48
  214. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/force_stage_resolver.yml +0 -48
  215. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/https_url.yml +0 -48
  216. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/stage_resolver.yml +0 -48
  217. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/stage_resolver_http.yml +0 -48
  218. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref.yml +0 -157
  219. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +0 -157
  220. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite.yml +0 -157
  221. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite_doi_http.yml +0 -157
  222. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/github.yml +0 -106
  223. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/orcid.yml +0 -106
  224. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/schema_org.yml +0 -106
  225. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +0 -157
  226. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/bibtex.yml +0 -106
  227. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/citeproc.yml +0 -106
  228. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/codemeta.yml +0 -106
  229. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crosscite.yml +0 -106
  230. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crossref.yml +0 -106
  231. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite.yml +0 -106
  232. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite_json.yml +0 -106
  233. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/ris.yml +0 -106
  234. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/schema_org.yml +0 -106
  235. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_string/crosscite.yml +0 -106
  236. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_for_match.yml +0 -48
  237. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +0 -48
  238. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_match.yml +0 -48
  239. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/hsh_to_fos_no_match.yml +0 -48
  240. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_for_match.yml +0 -48
  241. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_match.yml +0 -48
  242. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/fos/name_to_fos_no_match.yml +0 -48
  243. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org/with_id.yml +0 -48
  244. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org_creators/with_affiliation.yml +0 -48
  245. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org_creators/without_affiliation.yml +0 -48
  246. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/maremma.yml +0 -75
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  434. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/sanitize/should_remove_a_tags.yml +0 -48
  435. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/spdx/hsh_to_spdx_id.yml +0 -48
  436. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/spdx/hsh_to_spdx_not_found.yml +0 -48
  437. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/spdx/hsh_to_spdx_url.yml +0 -48
  438. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/spdx/name_to_spdx_exists.yml +0 -48
  439. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/spdx/name_to_spdx_id.yml +0 -48
  440. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/to_schema_org/with_id.yml +0 -48
  441. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/to_schema_org_identifiers/with_identifiers.yml +0 -48
  442. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_doi/doi.yml +0 -48
  443. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_10.yml +0 -48
  444. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_11.yml +0 -48
  445. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_12.yml +0 -48
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  447. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_14.yml +0 -48
  448. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_4.yml +0 -48
  449. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_5.yml +0 -48
  450. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_6.yml +0 -48
  451. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_7.yml +0 -48
  452. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_8.yml +0 -48
  453. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/1_7_9.yml +0 -48
  454. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/funder_doi.yml +0 -48
  455. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/funder_doi_without_prefix.yml +0 -48
  456. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_funder_doi/non-funder_doi.yml +0 -48
  457. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid.yml +0 -48
  458. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_https.yml +0 -48
  459. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_id.yml +0 -48
  460. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_sandbox.yml +0 -65
  461. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_sandbox_https.yml +0 -65
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  464. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_www.yml +0 -48
  465. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme.yml +0 -48
  466. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme_https.yml +0 -48
  467. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme_trailing_slash.yml +0 -48
  468. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme_www.yml +0 -48
  469. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/doi.yml +0 -48
  470. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/doi_as_url.yml +0 -48
  471. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/doi_with_protocol.yml +0 -48
  472. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/only_prefix.yml +0 -48
  473. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/DOI.yml +0 -48
  474. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/ISSN.yml +0 -48
  475. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/URL.yml +0 -48
  476. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/string.yml +0 -48
  477. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/BlogPosting.yml +0 -55
  478. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/Dataset.yml +0 -55
  479. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/authors_with_affiliations.yml +0 -114
  480. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/climate_data.yml +0 -55
  481. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/from_schema_org.yml +0 -115
  482. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/keywords_subject_scheme.yml +0 -55
  483. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/maremma.yml +0 -75
  484. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/text.yml +0 -55
  485. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/with_data_citation.yml +0 -55
  486. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/with_pages.yml +0 -52
  487. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Dataset.yml +0 -55
  488. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Journal_article.yml +0 -55
  489. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Journal_article_vancouver_style.yml +0 -55
  490. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Missing_author.yml +0 -49
  491. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/interactive_resource_without_dates.yml +0 -55
  492. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/software_w/version.yml +0 -55
  493. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/Another_dataset.yml +0 -55
  494. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/BlogPosting.yml +0 -55
  495. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/BlogPosting_schema_org.yml +0 -115
  496. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/Dataset.yml +0 -55
  497. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/container_title.yml +0 -55
  498. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/interactive_resource_without_dates.yml +0 -55
  499. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/journal_article.yml +0 -55
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  504. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/organization_author.yml +0 -52
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  509. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite.yml +0 -55
  510. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite_check_codemeta_v2.yml +0 -55
  511. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crosscite/datacite_database_attributes.yml +0 -55
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  517. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_csv/climate_data.yml +0 -55
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  526. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/DOI_not_found.yml +0 -51
  527. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/Dataset_in_schema_4_0.yml +0 -55
  528. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/Text_pass-thru.yml +0 -55
  529. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/Text_pass-thru_with_doi_in_options.yml +0 -55
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  559. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +0 -106
  560. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +0 -55
  561. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_Cyark.yml +0 -106
  562. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +0 -106
  563. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_isReferencedBy.yml +0 -55
  564. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/alternate_identifiers.yml +0 -55
  565. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/data_catalog.yml +0 -55
  566. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/geo_location_box.yml +0 -55
  567. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/interactive_resource_without_dates.yml +0 -55
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  569. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +0 -75
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  573. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting.yml +0 -55
  574. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting_schema_org.yml +0 -117
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  577. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/with_pages.yml +0 -52
  578. data/spec/fixtures/vivli.xml +0 -1
  579. data/spec/metadata_spec.rb +0 -165
  580. data/spec/readers/bibtex_reader_spec.rb +0 -63
  581. data/spec/readers/citeproc_reader_spec.rb +0 -61
  582. data/spec/readers/codemeta_reader_spec.rb +0 -138
  583. data/spec/readers/crosscite_reader_spec.rb +0 -41
  584. data/spec/readers/crossref_reader_spec.rb +0 -1102
  585. data/spec/readers/datacite_json_reader_spec.rb +0 -80
  586. data/spec/readers/datacite_reader_spec.rb +0 -1731
  587. data/spec/readers/npm_reader_spec.rb +0 -66
  588. data/spec/readers/ris_reader_spec.rb +0 -75
  589. data/spec/readers/schema_org_reader_spec.rb +0 -344
  590. data/spec/spec_helper.rb +0 -95
  591. data/spec/utils_spec.rb +0 -666
  592. data/spec/writers/bibtex_writer_spec.rb +0 -195
  593. data/spec/writers/citation_writer_spec.rb +0 -52
  594. data/spec/writers/citeproc_writer_spec.rb +0 -290
  595. data/spec/writers/codemeta_writer_spec.rb +0 -45
  596. data/spec/writers/crosscite_writer_spec.rb +0 -122
  597. data/spec/writers/crossref_writer_spec.rb +0 -21
  598. data/spec/writers/csv_writer_spec.rb +0 -94
  599. data/spec/writers/datacite_json_writer_spec.rb +0 -90
  600. data/spec/writers/datacite_writer_spec.rb +0 -428
  601. data/spec/writers/jats_writer_spec.rb +0 -193
  602. data/spec/writers/rdf_xml_writer_spec.rb +0 -86
  603. data/spec/writers/ris_writer_spec.rb +0 -207
  604. data/spec/writers/schema_org_writer_spec.rb +0 -369
  605. data/spec/writers/turtle_writer_spec.rb +0 -84
data/spec/fixtures/datacite-example-relateditems-with-attributes.xml DELETED
@@ -1,61 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
3
- xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4.4/metadata.xsd">
4
- <identifier identifierType="DOI">10.5072/example-full</identifier>
5
- <creators>
6
- <creator>
7
- <creatorName nameType="Personal">Hallett, Richard</creatorName>
8
- <givenName>Richard</givenName>
9
- <familyName>Hallett</familyName>
10
- </creator>
11
- </creators>
12
- <titles>
13
- <title xml:lang="en-US">Example for related items</title>
14
- </titles>
15
- <publisher xml:lang="en">DataCite</publisher>
16
- <publicationYear>2021</publicationYear>
17
- <dates>
18
- <date dateType="Updated" dateInformation="Updated with 4.4 properties">2021-01-26</date>
19
- </dates>
20
- <language>en-US</language>
21
- <resourceType resourceTypeGeneral="Software">XML</resourceType>
22
- <version>1</version>
23
- <descriptions>
24
- <description xml:lang="en-US" descriptionType="Abstract">A test example for related items</description>
25
- </descriptions>
26
- <relatedItems>
27
- <relatedItem relationType="IsPublishedIn" relatedItemType="Journal">
28
- <relatedItemIdentifier
29
- relatedItemIdentifierType="DOI"
30
- relatedMetadataScheme="citeproc+json"
31
- schemeURI="https://github.com/citation-style-language/schema/raw/master/csl-data.json"
32
- schemeType="URL">10.5072/john-smiths-1234</relatedItemIdentifier>
33
- <creators>
34
- <creator>
35
- <creatorName nameType="Personal">Smith, John</creatorName>
36
- <givenName>John</givenName>
37
- <familyName>Smith</familyName>
38
- </creator>
39
- </creators>
40
- <titles>
41
- <title>Understanding the fictional John Smith</title>
42
- <title titleType="Subtitle">A detailed look</title>
43
- </titles>
44
- <publicationYear>1776</publicationYear>
45
- <volume xml:lang="en">776</volume>
46
- <issue xml:lang="en">1</issue>
47
- <number numberType="Chapter">1</number>
48
- <firstPage xml:lang="en">50</firstPage>
49
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- <description descriptionType="Abstract">This dataset documents the geochemical and grain-size characteristics of atmospheric dust from Pennsylvanian carbonates of the Copacabana Formation, recovered in core (Mobil-Oxy Manuripi X-1) from the Madre de Dios basin (Bolivia), within southern mid-latitudes (~35˚S) of western Gondwana. Provenance indicates two discrete sources of atmospheric input–a western volcanic arc source and eastern continental source, recording both westerly (zonal) and easterly (katabatic) wind directions.</description>
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- <description descriptionType="Other">Carvajal, C.P., Soreghan, G. S, Isaacson, P. E., Hinnov, L.A., Hamilton, M. A., Heavens, N.G., (2018) Climatic and volcanic events recorded in atmospheric dust from the Late Pennsylvanian Copacabana Formation (Bolivia) of Western Gondwana. Gondwana Research, v 58, p 105-121.</description>
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data/spec/fixtures/datacite-multiple-language.xml DELETED
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