bolognese 1.0.26 → 1.0.27
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- checksums.yaml +4 -4
- data/Gemfile.lock +1 -1
- data/lib/bolognese/datacite_utils.rb +3 -3
- data/lib/bolognese/metadata.rb +9 -9
- data/lib/bolognese/metadata_utils.rb +2 -2
- data/lib/bolognese/readers/bibtex_reader.rb +1 -1
- data/lib/bolognese/readers/citeproc_reader.rb +4 -4
- data/lib/bolognese/readers/codemeta_reader.rb +2 -2
- data/lib/bolognese/readers/crossref_reader.rb +2 -2
- data/lib/bolognese/readers/datacite_json_reader.rb +2 -2
- data/lib/bolognese/readers/datacite_reader.rb +2 -2
- data/lib/bolognese/readers/ris_reader.rb +1 -1
- data/lib/bolognese/readers/schema_org_reader.rb +4 -4
- data/lib/bolognese/version.rb +1 -1
- data/lib/bolognese/writers/bibtex_writer.rb +1 -1
- data/lib/bolognese/writers/codemeta_writer.rb +1 -1
- data/lib/bolognese/writers/crosscite_writer.rb +2 -2
- data/lib/bolognese/writers/datacite_json_writer.rb +2 -2
- data/lib/bolognese/writers/jats_writer.rb +5 -5
- data/lib/bolognese/writers/ris_writer.rb +1 -1
- data/lib/bolognese/writers/schema_org_writer.rb +2 -2
- data/spec/author_utils_spec.rb +3 -3
- data/spec/fixtures/crosscite.json +2 -2
- data/spec/fixtures/datacite.json +1 -1
- data/spec/fixtures/datacite_software.json +2 -2
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_author_names_in_one_creatorsName.yml +96 -0
- data/spec/readers/bibtex_reader_spec.rb +3 -3
- data/spec/readers/citeproc_reader_spec.rb +2 -2
- data/spec/readers/codemeta_reader_spec.rb +5 -5
- data/spec/readers/crosscite_reader_spec.rb +2 -2
- data/spec/readers/crossref_reader_spec.rb +18 -18
- data/spec/readers/datacite_json_reader_spec.rb +2 -2
- data/spec/readers/datacite_reader_spec.rb +58 -58
- data/spec/readers/ris_reader_spec.rb +3 -3
- data/spec/readers/schema_org_reader_spec.rb +19 -19
- data/spec/writers/crosscite_writer_spec.rb +10 -10
- data/spec/writers/datacite_json_writer_spec.rb +8 -8
- data/spec/writers/datacite_writer_spec.rb +7 -7
- metadata +3 -2
@@ -31,8 +31,8 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.identifier).to eq("https://doi.org/10.7554/elife.01567")
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expect(subject.types).to eq("citeproc"=>"misc", "resourceTypeGeneral"=>"Text", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
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expect(subject.url).to eq("http://elifesciences.org/lookup/doi/10.7554/eLife.01567")
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expect(subject.
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expect(subject.
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expect(subject.creators.length).to eq(5)
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expect(subject.creators.first).to eq("type"=>"Person",
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"name"=>"Martial Sankar",
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"givenName"=>"Martial",
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"familyName"=>"Sankar")
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@@ -52,7 +52,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.state).to eq("not_found")
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expect(subject.identifier).to eq("https://doi.org/10.7554/elife.01567")
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expect(subject.types).to eq("citeproc"=>"misc", "resourceTypeGeneral"=>"Text", "ris"=>"THES", "schemaOrg"=>"Thesis")
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expect(subject.
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expect(subject.creators).to eq([{"type"=>"Person", "name"=>"Y. Toparlar", "givenName"=>"Y.", "familyName"=>"Toparlar"}])
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expect(subject.titles).to eq([{"title"=>"A multiscale analysis of the urban heat island effect"}])
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expect(subject.descriptions.first["description"]).to start_with("Designing the climates of cities")
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expect(subject.dates).to eq([{"date"=>"2018-04-25", "dateType"=>"Issued"}, {"date"=>"2018-04-25", "dateType"=>"Created"}])
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@@ -22,7 +22,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.identifier).to eq("https://doi.org/10.5438/4k3m-nyvg")
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expect(subject.url).to eq("https://blog.datacite.org/eating-your-own-dog-food")
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expect(subject.types).to eq("bibtex"=>"article", "citeproc"=>"post-weblog", "resourceTypeGeneral"=>"Text", "ris"=>"GEN", "schemaOrg"=>"BlogPosting")
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expect(subject.
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expect(subject.creators).to eq([{"type"=>"Person", "id"=>"https://orcid.org/0000-0003-1419-2405", "name"=>"Martin Fenner", "givenName"=>"Martin", "familyName"=>"Fenner"}])
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expect(subject.titles).to eq([{"title"=>"Eating your own Dog Food"}])
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expect(subject.descriptions.first["description"]).to start_with("Eating your own dog food")
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expect(subject.subjects).to eq([{"subject"=>"datacite"}, {"subject"=>"doi"}, {"subject"=>"metadata"}, {"subject"=>"featured"}])
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@@ -52,8 +52,8 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.url).to eq("https://zenodo.org/record/1196821")
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.titles).to eq([{"title"=>"PsPM-SC4B: SCR, ECG, EMG, PSR and respiration measurements in a delay fear conditioning task with auditory CS and electrical US"}])
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expect(subject.
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expect(subject.
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expect(subject.creators.size).to eq(6)
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expect(subject.creators.first).to eq("type"=>"Person", "id"=>"https://orcid.org/0000-0001-9688-838X", "name"=>"Matthias Staib", "givenName"=>"Matthias", "familyName"=>"Staib")
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end
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it "pangaea" do
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@@ -65,8 +65,8 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.url).to eq("https://doi.pangaea.de/10.1594/PANGAEA.836178")
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.titles).to eq([{"title"=>"Hydrological and meteorological investigations in a lake near Kangerlussuaq, west Greenland"}])
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expect(subject.
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expect(subject.
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expect(subject.creators.size).to eq(8)
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expect(subject.creators.first).to eq("type"=>"Person", "name"=>"Johansson, Emma", "givenName"=>"Emma", "familyName"=>"Johansson")
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end
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# service doesn't return html to script
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@@ -80,8 +80,8 @@ describe Bolognese::Metadata, vcr: true do
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# expect(subject.url).to eq("https://doi.org/10.3334/ornldaac/1418")
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# expect(subject.type).to eq("DataSet")
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# expect(subject.title).to eq("AirMOSS: L2/3 Volumetric Soil Moisture Profiles Derived From Radar, 2012-2015")
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# expect(subject.
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# expect(subject.
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# expect(subject.creators.size).to eq(8)
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# expect(subject.creators.first).to eq("type"=>"Person", "name"=>"M. MOGHADDAM", "givenName"=>"M.", "familyName"=>"MOGHADDAM")
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# end
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it "harvard dataverse" do
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@@ -93,7 +93,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.titles).to eq([{"title"=>"Summary data ankylosing spondylitis GWAS"}])
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expect(subject.periodical).to eq("title"=>"Harvard Dataverse", "type"=>"DataCatalog", "url"=>"https://dataverse.harvard.edu")
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expect(subject.
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expect(subject.creators).to eq([{"name" => "International Genetics Of Ankylosing Spondylitis Consortium (IGAS)"}])
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expect(subject.schema_version).to eq("https://schema.org/version/3.3")
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end
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@@ -106,7 +106,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.titles).to eq([{"title"=>"Summary data ankylosing spondylitis GWAS"}])
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expect(subject.periodical).to eq("title"=>"Harvard Dataverse", "type"=>"DataCatalog", "url"=>"https://dataverse.harvard.edu")
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expect(subject.
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expect(subject.creators).to eq([{"name" => "International Genetics Of Ankylosing Spondylitis Consortium (IGAS)"}])
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end
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end
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@@ -118,7 +118,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.identifier).to eq("https://doi.org/10.5438/4k3m-nyvg")
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expect(subject.url).to eq("https://blog.datacite.org/eating-your-own-dog-food")
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expect(subject.types).to eq("bibtex"=>"article", "citeproc"=>"post-weblog", "resourceTypeGeneral"=>"Text", "ris"=>"GEN", "schemaOrg"=>"BlogPosting")
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expect(subject.
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expect(subject.creators).to eq([{"type"=>"Person", "id"=>"http://orcid.org/0000-0003-1419-2405", "name"=>"Martin Fenner", "givenName"=>"Martin", "familyName"=>"Fenner"}])
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expect(subject.titles).to eq([{"title"=>"Eating your own Dog Food"}])
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expect(subject.descriptions.first["description"]).to start_with("Eating your own dog food")
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expect(subject.subjects).to eq([{"subject"=>"datacite"}, {"subject"=>"doi"}, {"subject"=>"metadata"}, {"subject"=>"featured"}])
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@@ -139,7 +139,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.url).to eq("https://ors.datacite.org/doi:/10.25491/d50j-3083")
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expect(subject.content_url).to eq(["https://storage.googleapis.com/gtex_analysis_v7/single_tissue_eqtl_data/GTEx_Analysis_v7_eQTL_expression_matrices.tar.gz"])
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceType"=>"Gene expression matrices", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.
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expect(subject.creators).to eq([{"name"=>"The GTEx Consortium", "type"=>"Organization"}])
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expect(subject.titles).to eq([{"title"=>"Fully processed, filtered and normalized gene expression matrices (in BED format) for each tissue, which were used as input into FastQTL for eQTL discovery"}])
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expect(subject.version_info).to eq("v7")
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expect(subject.subjects).to eq([{"subject"=>"gtex"}, {"subject"=>"annotation"}, {"subject"=>"phenotype"}, {"subject"=>"gene regulation"}, {"subject"=>"transcriptomics"}])
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@@ -160,7 +160,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.url).to eq("https://ors.datacite.org/doi:/10.23725/8na3-9s47")
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expect(subject.content_url).to eq(["s3://cgp-commons-public/topmed_open_access/197bc047-e917-55ed-852d-d563cdbc50e4/NWD165827.recab.cram", "gs://topmed-irc-share/public/NWD165827.recab.cram"])
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceType"=>"CRAM file", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.
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expect(subject.creators).to eq([{"name"=>"TOPMed IRC", "type"=>"Organization"}])
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expect(subject.titles).to eq([{"title"=>"NWD165827.recab.cram"}])
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expect(subject.subjects).to eq([{"subject"=>"topmed"}, {"subject"=>"whole genome sequencing"}])
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expect(subject.dates).to eq([{"date"=>"2017-11-30", "dateType"=>"Issued"}])
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@@ -177,8 +177,8 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.valid?).to be true
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expect(subject.identifier).to eq("https://doi.org/10.6071/z7wc73")
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceType"=>"dataset", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.
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expect(subject.
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expect(subject.creators.length).to eq(6)
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expect(subject.creators.first).to eq("familyName"=>"Bales", "givenName"=>"Roger", "name"=>"Roger Bales", "type"=>"Person")
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expect(subject.titles).to eq([{"title"=>"Southern Sierra Critical Zone Observatory (SSCZO), Providence Creek meteorological data, soil moisture and temperature, snow depth and air temperature"}])
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expect(subject.subjects).to eq([{"subject"=>"Earth sciences"},
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{"subject"=>"soil moisture"},
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@@ -202,8 +202,8 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.valid?).to be true
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expect(subject.identifier).to eq("https://doi.org/10.1594/pangaea.842237")
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.
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expect(subject.
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expect(subject.creators.length).to eq(2)
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expect(subject.creators.first).to eq("name"=>"Tara Oceans Consortium, Coordinators", "type"=>"Organization")
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expect(subject.titles).to eq([{"title"=>"Registry of all stations from the Tara Oceans Expedition (2009-2013)"}])
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expect(subject.dates).to eq([{"date"=>"2015-02-03", "dateType"=>"Issued"}])
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expect(subject.publication_year).to eq("2015")
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@@ -221,7 +221,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.url).to eq("https://ors.datacite.org/doi:/10.23725/7jg3-v803")
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expect(subject.content_url).to eq(["s3://cgp-commons-public/topmed_open_access/44a8837b-4456-5709-b56b-54e23000f13a/NWD100953.recab.cram","gs://topmed-irc-share/public/NWD100953.recab.cram","dos://dos.commons.ucsc-cgp.org/01b048d0-e128-4cb0-94e9-b2d2cab7563d?version=2018-05-26T133719.491772Z"])
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expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceType"=>"CRAM file", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
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expect(subject.
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expect(subject.creators).to eq([{"name"=>"TOPMed", "type"=>"Organization"}])
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expect(subject.titles).to eq([{"title"=>"NWD100953.recab.cram"}])
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expect(subject.subjects).to eq([{"subject"=>"topmed"}, {"subject"=>"whole genome sequencing"}])
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expect(subject.dates).to eq([{"date"=>"2017-11-30", "dateType"=>"Issued"}])
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@@ -234,7 +234,7 @@ describe Bolognese::Metadata, vcr: true do
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subject = Bolognese::Metadata.new(input: nil,
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from: "schema_org",
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doi: "10.5281/zenodo.1239",
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creators: [{"type"=>"Person", "name"=>"Jahn, Najko", "givenName"=>"Najko", "familyName"=>"Jahn"}],
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titles: [{ "title" => "Publication Fp7 Funding Acknowledgment - Plos Openaire" }],
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descriptions: [{ "description" => "The dataset contains a sample of metadata describing papers" }],
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publisher: "Zenodo",
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@@ -253,7 +253,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(subject.identifier).to eq("https://doi.org/10.5281/zenodo.1239")
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expect(subject.types["schemaOrg"]).to eq("Dataset")
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expect(subject.types["resourceTypeGeneral"]).to eq("Dataset")
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expect(subject.
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expect(subject.creators).to eq([{"familyName"=>"Jahn", "givenName"=>"Najko", "name"=>"Jahn, Najko", "type"=>"Person"}])
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expect(subject.titles).to eq([{"title"=>"Publication Fp7 Funding Acknowledgment - Plos Openaire"}])
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expect(subject.descriptions.first["description"]).to start_with("The dataset contains a sample of metadata describing papers")
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expect(subject.dates).to eq([{"date"=>"2013-04-03", "dateType"=>"Issued"}])
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@@ -22,8 +22,8 @@ describe Bolognese::Metadata, vcr: true do
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subject = Bolognese::Metadata.new(input: input, from: "crossref")
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crosscite = JSON.parse(subject.crosscite)
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expect(crosscite.fetch("types")).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceType"=>"JournalArticle", "resourceTypeGeneral"=>"Text", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
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expect(crosscite.fetch("
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expect(crosscite.fetch("
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expect(crosscite.fetch("creators").count).to eq(7)
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expect(crosscite.fetch("creators")[2]).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0003-2043-4925", "name"=>"Beatriz Hernandez", "givenName"=>"Beatriz", "familyName"=>"Hernandez")
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end
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# it "with editor" do
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@@ -40,8 +40,8 @@ describe Bolognese::Metadata, vcr: true do
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expect(crosscite.fetch("types")).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceTypeGeneral"=>"Text", "resourceType"=>"JournalArticle", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
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expect(crosscite.fetch("titles")).to eq([{"title"=>"Automated quantitative histology reveals vascular morphodynamics during Arabidopsis hypocotyl secondary growth"}])
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expect(crosscite.dig("descriptions", 0, "description")).to start_with("Among various advantages, their small size makes model organisms preferred subjects of investigation.")
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expect(crosscite.fetch("
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expect(crosscite.fetch("
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expect(crosscite.fetch("creators").count).to eq(5)
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expect(crosscite.fetch("creators").first).to eq("type"=>"Person", "name"=>"Martial Sankar", "givenName"=>"Martial", "familyName"=>"Sankar")
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end
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it "BlogPosting Citeproc JSON" do
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@@ -52,7 +52,7 @@ describe Bolognese::Metadata, vcr: true do
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expect(crosscite["types"]).to eq("bibtex"=>"article", "citeproc"=>"post-weblog", "resourceTypeGeneral"=>"Text", "ris"=>"GEN", "schemaOrg"=>"BlogPosting")
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expect(crosscite.fetch("titles")).to eq([{"title"=>"Eating your own Dog Food"}])
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expect(crosscite.dig("descriptions", 0, "description")).to start_with("Eating your own dog food")
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expect(crosscite.fetch("
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expect(crosscite.fetch("creators")).to eq([{"type"=>"Person", "name"=>"Martin Fenner", "givenName"=>"Martin", "familyName"=>"Fenner"}])
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end
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it "rdataone" do
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@@ -60,8 +60,8 @@ describe Bolognese::Metadata, vcr: true do
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subject = Bolognese::Metadata.new(input: input, from: "codemeta")
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crosscite = JSON.parse(subject.crosscite)
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62
62
|
expect(crosscite["titles"]).to eq([{"title"=>"R Interface to the DataONE REST API"}])
|
63
|
-
expect(crosscite["
|
64
|
-
expect(crosscite["
|
63
|
+
expect(crosscite["creators"].length).to eq(3)
|
64
|
+
expect(crosscite["creators"].last).to eq("type"=>"Organization", "name"=>"University Of California, Santa Barbara")
|
65
65
|
expect(crosscite["version"]).to eq("2.0.0")
|
66
66
|
end
|
67
67
|
|
@@ -71,8 +71,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
71
71
|
crosscite = JSON.parse(subject.crosscite)
|
72
72
|
expect(crosscite.fetch("url")).to eq("http://datadryad.org/resource/doi:10.5061/dryad.8515")
|
73
73
|
expect(crosscite.fetch("titles")).to eq([{"title"=>"Data from: A new malaria agent in African hominids."}])
|
74
|
-
expect(crosscite.fetch("
|
75
|
-
expect(crosscite.fetch("
|
74
|
+
expect(crosscite.fetch("creators").length).to eq(8)
|
75
|
+
expect(crosscite.fetch("creators").first).to eq("type"=>"Person", "familyName" => "Ollomo", "givenName" => "Benjamin", "name" => "Benjamin Ollomo")
|
76
76
|
expect(crosscite.fetch("dates")).to eq([{"date"=>"2011", "dateType"=>"Issued"}])
|
77
77
|
expect(crosscite.fetch("publication_year")).to eq("2011")
|
78
78
|
expect(crosscite.fetch("provider_id")).to eq("DRYAD")
|
@@ -84,7 +84,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
84
84
|
subject = Bolognese::Metadata.new(input: input, from: "codemeta")
|
85
85
|
crosscite = JSON.parse(subject.crosscite)
|
86
86
|
expect(crosscite.fetch("titles")).to eq( [{"title"=>"Maremma: a Ruby library for simplified network calls"}])
|
87
|
-
expect(crosscite.fetch("
|
87
|
+
expect(crosscite.fetch("creators")).to eq([{"familyName"=>"Fenner", "givenName"=>"Martin", "id"=>"http://orcid.org/0000-0003-0077-4738", "name"=>"Martin Fenner", "type"=>"Person"}])
|
88
88
|
end
|
89
89
|
|
90
90
|
it "with data citation schema.org" do
|
@@ -22,8 +22,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
22
22
|
datacite = JSON.parse(subject.datacite_json)
|
23
23
|
expect(datacite.fetch("url")).to eq("http://www.hindawi.com/journals/pm/2012/291294/")
|
24
24
|
expect(datacite.fetch("types")).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceType"=>"JournalArticle", "resourceTypeGeneral"=>"Text", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
|
25
|
-
expect(datacite.fetch("
|
26
|
-
expect(datacite.fetch("
|
25
|
+
expect(datacite.fetch("creators").length).to eq(7)
|
26
|
+
expect(datacite.fetch("creators").first).to eq("type"=>"Person", "name"=>"Wendy Thanassi", "givenName"=>"Wendy", "familyName"=>"Thanassi")
|
27
27
|
end
|
28
28
|
|
29
29
|
it "Crossref DOI" do
|
@@ -33,8 +33,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
33
33
|
expect(datacite.fetch("types")).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceType"=>"JournalArticle", "resourceTypeGeneral"=>"Text", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
|
34
34
|
expect(datacite.fetch("titles")).to eq([{"title"=>"Automated quantitative histology reveals vascular morphodynamics during Arabidopsis hypocotyl secondary growth"}])
|
35
35
|
expect(datacite.dig("descriptions", 0, "description")).to start_with("Among various advantages, their small size makes model organisms preferred subjects of investigation.")
|
36
|
-
expect(datacite.fetch("
|
37
|
-
expect(datacite.fetch("
|
36
|
+
expect(datacite.fetch("creators").length).to eq(5)
|
37
|
+
expect(datacite.fetch("creators").first).to eq("type"=>"Person", "name"=>"Martial Sankar", "givenName"=>"Martial", "familyName"=>"Sankar")
|
38
38
|
end
|
39
39
|
|
40
40
|
it "BlogPosting Citeproc JSON" do
|
@@ -44,7 +44,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
44
44
|
expect(datacite.fetch("types")).to eq("bibtex"=>"article", "citeproc"=>"post-weblog", "resourceTypeGeneral"=>"Text", "ris"=>"GEN", "schemaOrg"=>"BlogPosting")
|
45
45
|
expect(datacite.fetch("titles")).to eq([{"title"=>"Eating your own Dog Food"}])
|
46
46
|
expect(datacite.dig("descriptions", 0, "description")).to start_with("Eating your own dog food")
|
47
|
-
expect(datacite.fetch("
|
47
|
+
expect(datacite.fetch("creators")).to eq([{"familyName"=>"Fenner", "givenName"=>"Martin", "name"=>"Martin Fenner", "type"=>"Person"}])
|
48
48
|
end
|
49
49
|
|
50
50
|
it "rdataone" do
|
@@ -52,8 +52,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
52
52
|
subject = Bolognese::Metadata.new(input: input, from: "codemeta")
|
53
53
|
datacite = JSON.parse(subject.datacite_json)
|
54
54
|
expect(datacite.fetch("titles")).to eq([{"title"=>"R Interface to the DataONE REST API"}])
|
55
|
-
expect(datacite.fetch("
|
56
|
-
expect(datacite.fetch("
|
55
|
+
expect(datacite.fetch("creators").length).to eq(3)
|
56
|
+
expect(datacite.fetch("creators").first).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0003-0077-4738", "name"=>"Matt Jones", "givenName"=>"Matt", "familyName"=>"Jones")
|
57
57
|
expect(datacite.fetch("version")).to eq("2.0.0")
|
58
58
|
end
|
59
59
|
|
@@ -62,7 +62,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
62
62
|
subject = Bolognese::Metadata.new(input: input, from: "codemeta")
|
63
63
|
datacite = JSON.parse(subject.datacite_json)
|
64
64
|
expect(datacite.fetch("titles")).to eq([{"title"=>"Maremma: a Ruby library for simplified network calls"}])
|
65
|
-
expect(datacite.fetch("
|
65
|
+
expect(datacite.fetch("creators")).to eq([{"type"=>"Person", "id"=>"http://orcid.org/0000-0003-0077-4738", "name"=>"Martin Fenner", "givenName"=>"Martin", "familyName"=>"Fenner"}])
|
66
66
|
end
|
67
67
|
|
68
68
|
it "with data citation schema.org" do
|
@@ -104,8 +104,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
104
104
|
expect(subject.valid?).to be true
|
105
105
|
expect(subject.identifier).to eq("https://doi.org/10.23640/07243.5153971")
|
106
106
|
expect(subject.types).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceType"=>"Paper", "resourceTypeGeneral"=>"Text", "ris"=>"RPRT", "schemaOrg"=>"ScholarlyArticle")
|
107
|
-
expect(subject.
|
108
|
-
expect(subject.
|
107
|
+
expect(subject.creators.length).to eq(20)
|
108
|
+
expect(subject.creators.first).to eq("type"=>"Person", "familyName" => "Paglione", "givenName" => "Laura", "id" => "https://orcid.org/0000-0003-3188-6273", "name" => "Laura Paglione")
|
109
109
|
expect(subject.titles).to eq([{"title"=>"Recommendation of: ORCID Works Metadata Working Group"}])
|
110
110
|
expect(subject.rights_list).to eq([{"rightsUri"=>"https://creativecommons.org/publicdomain/zero/1.0", "rights"=>"CC-0"}])
|
111
111
|
expect(subject.dates).to eq([{"date"=>"2017-06-28", "dateType"=>"Created"}, {"date"=>"2017-06-28", "dateType"=>"Updated"}, {"date"=>"2017", "dateType"=>"Issued"}])
|
@@ -122,8 +122,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
122
122
|
expect(subject.valid?).to be true
|
123
123
|
expect(subject.identifier).to eq("https://doi.org/10.5072/07243.5153971")
|
124
124
|
expect(subject.types).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceType"=>"Paper", "resourceTypeGeneral"=>"Text", "ris"=>"RPRT", "schemaOrg"=>"ScholarlyArticle")
|
125
|
-
expect(subject.
|
126
|
-
expect(subject.
|
125
|
+
expect(subject.creators.length).to eq(20)
|
126
|
+
expect(subject.creators.first).to eq("type"=>"Person", "familyName" => "Paglione", "givenName" => "Laura", "id" => "https://orcid.org/0000-0003-3188-6273", "name" => "Laura Paglione")
|
127
127
|
expect(subject.titles).to eq([{"title"=>"Recommendation of: ORCID Works Metadata Working Group"}])
|
128
128
|
expect(subject.rights_list).to eq([{"rightsUri"=>"https://creativecommons.org/publicdomain/zero/1.0", "rights"=>"CC-0"}])
|
129
129
|
expect(subject.dates).to eq([{"date"=>"2017-06-28", "dateType"=>"Created"}, {"date"=>"2017-06-28", "dateType"=>"Updated"}, {"date"=>"2017", "dateType"=>"Issued"}])
|
@@ -140,8 +140,8 @@ describe Bolognese::Metadata, vcr: true do
|
|
140
140
|
expect(subject.valid?).to be true
|
141
141
|
expect(subject.identifier).to eq("https://doi.org/10.5061/dryad.8515")
|
142
142
|
expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"dataset", "resourceType"=>"DataPackage", "resourceTypeGeneral"=>"Dataset", "ris"=>"DATA", "schemaOrg"=>"Dataset")
|
143
|
-
expect(subject.
|
144
|
-
expect(subject.
|
143
|
+
expect(subject.creators.length).to eq(8)
|
144
|
+
expect(subject.creators.first).to eq("type"=>"Person", "name"=>"Benjamin Ollomo", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
|
145
145
|
expect(subject.titles).to eq([{"title"=>"Data from: A new malaria agent in African hominids."}])
|
146
146
|
expect(subject.alternate_identifiers).to eq([{"alternateIdentifier"=> "Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.", "alternateIdentifierType"=>"citation"}])
|
147
147
|
expect(subject.rights_list).to eq([{"rightsUri"=>"http://creativecommons.org/publicdomain/zero/1.0"}])
|
@@ -231,7 +231,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
231
231
|
it "required metadata no input" do
|
232
232
|
input = nil
|
233
233
|
subject = Bolognese::Metadata.new(input: input, doi: "10.4124/05f6c379-dd68-4cdb-880d-33d3e9576d52/1")
|
234
|
-
subject.
|
234
|
+
subject.creators = [{"creatorName"=>"Fenner, Martin", "givenName"=>"Martin", "familyName"=>"Fenner"}]
|
235
235
|
subject.titles = [{ "title" => "Data from: Automated quantitative histology reveals vascular morphodynamics during Arabidopsis hypocotyl secondary growth" }]
|
236
236
|
subject.types = { "schemaOrg" => "Dataset", "resourceTypeGeneral" => "Dataset" }
|
237
237
|
subject.publication_year = "2011"
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: bolognese
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.0.
|
4
|
+
version: 1.0.27
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Martin Fenner
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2018-11-
|
11
|
+
date: 2018-11-30 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: maremma
|
@@ -809,6 +809,7 @@ files:
|
|
809
809
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/keywords_with_attributes.yml
|
810
810
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/leading_and_trailing_whitespace.yml
|
811
811
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_author_names_in_one_creatorName.yml
|
812
|
+
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_author_names_in_one_creatorsName.yml
|
812
813
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_licenses.yml
|
813
814
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/series-information.yml
|
814
815
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/subject_scheme.yml
|