bolognese 0.8.5 → 0.8.7

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Files changed (44) hide show
  1. checksums.yaml +4 -4
  2. data/Gemfile.lock +10 -9
  3. data/README.md +15 -1
  4. data/lib/bolognese.rb +2 -0
  5. data/lib/bolognese/bibtex.rb +57 -1
  6. data/lib/bolognese/citeproc.rb +116 -0
  7. data/lib/bolognese/codemeta.rb +9 -1
  8. data/lib/bolognese/crossref.rb +20 -0
  9. data/lib/bolognese/datacite.rb +9 -1
  10. data/lib/bolognese/datacite_json.rb +9 -1
  11. data/lib/bolognese/datacite_utils.rb +1 -1
  12. data/lib/bolognese/metadata.rb +185 -1
  13. data/lib/bolognese/ris.rb +117 -0
  14. data/lib/bolognese/schema_org.rb +8 -0
  15. data/lib/bolognese/utils.rb +84 -17
  16. data/lib/bolognese/version.rb +1 -1
  17. data/resources/kernel-3/metadata.xsd +3 -3
  18. data/spec/bibtex_spec.rb +34 -0
  19. data/spec/citeproc_spec.rb +48 -0
  20. data/spec/codemeta_spec.rb +33 -3
  21. data/spec/crossref_spec.rb +80 -2
  22. data/spec/datacite_json_spec.rb +28 -12
  23. data/spec/datacite_spec.rb +72 -0
  24. data/spec/datacite_utils_spec.rb +1 -1
  25. data/spec/fixtures/citeproc.json +21 -0
  26. data/spec/fixtures/vcr_cassettes/Bolognese_Codemeta/get_metadata_as_citeproc/maremma.yml +100 -0
  27. data/spec/fixtures/vcr_cassettes/Bolognese_Codemeta/get_metadata_as_ris/BlogPosting.yml +100 -0
  28. data/spec/fixtures/vcr_cassettes/Bolognese_Codemeta/get_metadata_as_ris/maremma.yml +100 -0
  29. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata_as_citeproc/journal_article.yml +723 -0
  30. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata_as_citeproc/with_pages.yml +370 -0
  31. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata_as_ris/journal_article.yml +723 -0
  32. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata_as_ris/with_pages.yml +370 -0
  33. data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata/Citeproc_JSON.yml +173 -0
  34. data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata_as_citeproc/BlogPosting.yml +155 -0
  35. data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata_as_citeproc/Dataset.yml +173 -0
  36. data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata_as_ris/BlogPosting.yml +155 -0
  37. data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata_as_ris/Dataset.yml +173 -0
  38. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/read/datacite.yml +173 -0
  39. data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write/datacite_to_bibtex.yml +173 -0
  40. data/spec/fixtures/vcr_cassettes/Bolognese_SchemaOrg/get_metadata_as_citeproc/BlogPosting.yml +653 -0
  41. data/spec/fixtures/vcr_cassettes/Bolognese_SchemaOrg/get_metadata_as_ris/BlogPosting.yml +653 -0
  42. data/spec/schema_org_spec.rb +30 -0
  43. data/spec/utils_spec.rb +50 -0
  44. metadata +22 -2
@@ -40,7 +40,7 @@ describe Bolognese::DataciteJson, vcr: true do
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  end
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  context "get metadata as bibtex" do
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- it "Dataset" do
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+ it "BlogPosting" do
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  bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
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  expect(bibtex[:bibtex_type].to_s).to eq("article")
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  expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
@@ -50,19 +50,35 @@ describe Bolognese::DataciteJson, vcr: true do
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  expect(bibtex[:publisher]).to eq("DataCite")
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  expect(bibtex[:year]).to eq("2016")
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  end
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+ end
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+ context "get metadata as citeproc" do
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  it "BlogPosting" do
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- id = "https://doi.org/10.5438/4K3M-NYVG"
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- subject = Bolognese::Datacite.new(id: id)
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- expect(subject.valid?).to be true
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- bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
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- expect(bibtex[:bibtex_type].to_s).to eq("article")
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- expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
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- expect(bibtex[:doi]).to eq("10.5438/4K3M-NYVG")
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- expect(bibtex[:title]).to eq("Eating your own Dog Food")
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- expect(bibtex[:author]).to eq("Fenner, Martin")
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- expect(bibtex[:publisher]).to eq("DataCite")
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- expect(bibtex[:year]).to eq("2016")
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+ json = JSON.parse(subject.citeproc)
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+ expect(json["type"]).to eq("report")
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+ expect(json["id"]).to eq("https://doi.org/10.5438/4k3m-nyvg")
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+ expect(json["DOI"]).to eq("10.5438/4K3M-NYVG")
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+ expect(json["title"]).to eq("Eating your own Dog Food")
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+ expect(json["author"]).to eq("family" => "Fenner","given" => "Martin")
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+ expect(json["publisher"]).to eq("DataCite")
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+ expect(json["issued"]).to eq("date-parts" => [[2016, 12, 20]])
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+ end
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+ end
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+
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+ context "get metadata as ris" do
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+ it "BlogPosting" do
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+ ris = subject.ris.split("\r\n")
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+ expect(ris[0]).to eq("TY - GEN")
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+ expect(ris[1]).to eq("T1 - Eating your own Dog Food")
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+ expect(ris[2]).to eq("T2 - DataCite")
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+ expect(ris[3]).to eq("AU - Fenner, Martin")
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+ expect(ris[4]).to eq("DO - 10.5438/4K3M-NYVG")
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+ expect(ris[5]).to eq("AB - Eating your own dog food is a slang term to describe that an organization should itself use the products and services it provides. For DataCite this means that we should use DOIs with appropriate metadata and strategies for long-term preservation for...")
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+ expect(ris[6]).to eq("KW - datacite")
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+ expect(ris[9]).to eq("PY - 2016")
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+ expect(ris[10]).to eq("PB - DataCite")
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+ expect(ris[11]).to eq("AN - MS-49-3632-5083")
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+ expect(ris[12]).to eq("ER - ")
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  end
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  end
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  end
@@ -257,4 +257,76 @@ describe Bolognese::Datacite, vcr: true do
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  expect(bibtex[:year]).to eq("2016")
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  end
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  end
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+
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+ context "get metadata as citeproc" do
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+ it "Dataset" do
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+ subject = Bolognese::Datacite.new(id: id)
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+ expect(subject.valid?).to be true
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+ json = JSON.parse(subject.citeproc)
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+ expect(json["type"]).to eq("dataset")
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+ expect(json["id"]).to eq("https://doi.org/10.5061/dryad.8515")
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+ expect(json["DOI"]).to eq("10.5061/DRYAD.8515")
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+ expect(json["title"]).to eq("Data from: A new malaria agent in African hominids.")
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+ expect(json["author"]).to eq([{"family"=>"Ollomo", "given"=>"Benjamin"},
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+ {"family"=>"Durand", "given"=>"Patrick"},
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+ {"family"=>"Prugnolle", "given"=>"Franck"},
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+ {"family"=>"Douzery", "given"=>"Emmanuel J. P."},
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+ {"family"=>"Arnathau", "given"=>"Céline"},
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+ {"family"=>"Nkoghe", "given"=>"Dieudonné"},
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+ {"family"=>"Leroy", "given"=>"Eric"},
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+ {"family"=>"Renaud", "given"=>"François"}])
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+ expect(json["publisher"]).to eq("Dryad Digital Repository")
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+ expect(json["issued"]).to eq("date-parts" => [[2011]])
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+ end
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+
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+ it "BlogPosting" do
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+ id = "https://doi.org/10.5438/4K3M-NYVG"
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+ subject = Bolognese::Datacite.new(id: id)
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+ expect(subject.valid?).to be true
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+ json = JSON.parse(subject.citeproc)
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+ expect(json["type"]).to eq("report")
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+ expect(json["id"]).to eq("https://doi.org/10.5438/4k3m-nyvg")
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+ expect(json["DOI"]).to eq("10.5438/4K3M-NYVG")
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+ expect(json["title"]).to eq("Eating your own Dog Food")
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+ expect(json["author"]).to eq("family"=>"Fenner", "given"=>"Martin")
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+ expect(json["publisher"]).to eq("DataCite")
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+ expect(json["issued"]).to eq("date-parts"=>[[2016, 12, 20]])
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+ end
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+ end
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+
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+ context "get metadata as ris" do
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+ it "Dataset" do
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+ subject = Bolognese::Datacite.new(id: id)
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+ expect(subject.valid?).to be true
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+ ris = subject.ris.split("\r\n")
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+ expect(ris[0]).to eq("TY - DATA")
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+ expect(ris[1]).to eq("T1 - Data from: A new malaria agent in African hominids.")
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+ expect(ris[2]).to eq("T2 - Dryad Digital Repository")
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+ expect(ris[3]).to eq("AU - Ollomo, Benjamin")
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+ expect(ris[11]).to eq("DO - 10.5061/DRYAD.8515")
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+ expect(ris[13]).to eq("KW - Malaria")
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+ expect(ris[19]).to eq("PY - 2011")
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+ expect(ris[20]).to eq("PB - Dryad Digital Repository")
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+ expect(ris[21]).to eq("AN - Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
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+ expect(ris[22]).to eq("ER - ")
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+ end
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+
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+ it "BlogPosting" do
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+ id = "https://doi.org/10.5438/4K3M-NYVG"
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+ subject = Bolognese::Datacite.new(id: id)
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+ expect(subject.valid?).to be true
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+ ris = subject.ris.split("\r\n")
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+ expect(ris[0]).to eq("TY - GEN")
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+ expect(ris[1]).to eq("T1 - Eating your own Dog Food")
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+ expect(ris[2]).to eq("T2 - DataCite")
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+ expect(ris[3]).to eq("AU - Fenner, Martin")
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+ expect(ris[4]).to eq("DO - 10.5438/4K3M-NYVG")
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+ expect(ris[5]).to eq("AB - Eating your own dog food is a slang term to describe that an organization should itself use the products and services it provides. For DataCite this means that we should use DOIs with appropriate metadata and strategies for long-term preservation for...")
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+ expect(ris[6]).to eq("KW - datacite")
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+ expect(ris[9]).to eq("PY - 2016")
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+ expect(ris[10]).to eq("PB - DataCite")
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+ expect(ris[11]).to eq("AN - MS-49-3632-5083")
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+ expect(ris[12]).to eq("ER - ")
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+ end
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+ end
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  end
@@ -17,7 +17,7 @@ describe Bolognese::Datacite, vcr: true do
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  it "insert" do
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  xml = Nokogiri::XML::Builder.new { |xml| subject.insert_creators(xml) }.to_xml
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  response = Maremma.from_xml(xml)
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- expect(response.dig("creators", "creator").first).to eq("creatorName"=>"Benjamin Ollomo", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
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+ expect(response.dig("creators", "creator").first).to eq("creatorName"=>"Ollomo, Benjamin", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
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  end
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  end
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@@ -0,0 +1,21 @@
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+ {
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+ "type": "post-weblog",
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+ "id": "https://doi.org/10.5438/4k3m-nyvg",
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+ "DOI": "10.5438/4k3m-nyvg",
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+ "URL": "https://blog.datacite.org/eating-your-own-dog-food",
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+ "title": "Eating your own Dog Food",
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+ "container-title": "DataCite Blog",
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+ "publisher": "DataCite",
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+ "abstract": "Eating your own dog food is a slang term to describe that an organization should itself use the products and services it provides. For DataCite this means that we should use DOIs with appropriate metadata and strategies for long-term preservation for...",
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+ "issued": {
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+ "date-parts": [
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+ [
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+ 2016, 12, 20
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+ ]
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+ ]
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+ },
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+ "author": [{
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+ "family": "Fenner",
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+ "given": "Martin"
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+ }]
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+ }
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