bolognese 0.10.21 → 0.10.22

checksums.yaml

@@ -1,7 +1,7 @@
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data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    bolognese (0.10.21)
+    bolognese (0.10.22)
       activesupport (>= 4.2.5, < 6)
       benchmark_methods (~> 0.7)
       bibtex-ruby (~> 4.1)
@@ -78,7 +78,7 @@ GEM
     loofah (2.2.2)
       crass (~> 1.0.2)
       nokogiri (>= 1.5.9)
-    maremma (4.0.10)
+    maremma (4.0.12)
       activesupport (>= 4.2.5, < 6)
       addressable (>= 2.3.6)
       builder (~> 3.2, >= 3.2.2)
@@ -94,7 +94,7 @@ GEM
     multi_json (1.13.1)
     multipart-post (2.0.0)
     namae (0.11.3)
-    nokogiri (1.8.3)
+    nokogiri (1.8.4)
       mini_portile2 (~> 2.3.0)
     oj (2.18.5)
     postrank-uri (1.0.23)

data/Rakefile

@@ -1,4 +1,5 @@
 #!/usr/bin/env rake
+# frozen_string_literal: true
 
 require 'bundler'
 require 'rake'

data/lib/bolognese.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'active_support/all'
 require 'nokogiri'
 require 'maremma'
@@ -16,7 +18,6 @@ require 'gender_detector'
 
 require "bolognese/version"
 require "bolognese/metadata"
-require "bolognese/orcid"
 require "bolognese/cli"
 require "bolognese/string"
 require "bolognese/array"

data/lib/bolognese/array.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 # turn array into hash or nil, depending on array size.
 # Reverses Array.wrap, but uses self to allow chaining with Array.wrap
 class Array

data/lib/bolognese/author_utils.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'namae'
 
 module Bolognese

data/lib/bolognese/cli.rb

@@ -1,4 +1,5 @@
 # encoding: UTF-8
+# frozen_string_literal: true
 
 require "thor"
 

data/lib/bolognese/datacite_utils.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module DataciteUtils
     def datacite_xml

data/lib/bolognese/doi_utils.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module DoiUtils
     def validate_doi(doi)

data/lib/bolognese/metadata.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require_relative 'metadata_utils'
 
 module Bolognese

data/lib/bolognese/metadata_utils.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require_relative 'doi_utils'
 require_relative 'author_utils'
 require_relative 'datacite_utils'

data/lib/bolognese/pubmed.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Pubmed
     # def get_pubmed_metadata(pmid, options = {})

data/lib/bolognese/readers/bibtex_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module BibtexReader

data/lib/bolognese/readers/citeproc_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module CiteprocReader

data/lib/bolognese/readers/codemeta_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module CodemetaReader

data/lib/bolognese/readers/crosscite_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module CrossciteReader

data/lib/bolognese/readers/crossref_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module CrossrefReader

data/lib/bolognese/readers/datacite_json_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module DataciteJsonReader

data/lib/bolognese/readers/datacite_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module DataciteReader

data/lib/bolognese/readers/ris_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module RisReader

data/lib/bolognese/readers/schema_org_reader.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Readers
     module SchemaOrgReader

data/lib/bolognese/string.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 class String
   def my_titleize
     self.gsub(/\b(['’]?[a-z])/) { "#{$1.capitalize}" }

data/lib/bolognese/utils.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Utils
     LICENSE_NAMES = {

data/lib/bolognese/version.rb

@@ -1,3 +1,3 @@
 module Bolognese
-  VERSION = "0.10.21"
+  VERSION = "0.10.22"
 end

data/lib/bolognese/whitelist_scrubber.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 # modified from https://gist.github.com/ivan-kolmychek/ee2fdc53f3e2c637271d
 
 module Bolognese

data/lib/bolognese/writers/bibtex_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module BibtexWriter

data/lib/bolognese/writers/citation_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module CitationWriter

data/lib/bolognese/writers/citeproc_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module CiteprocWriter

data/lib/bolognese/writers/codemeta_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module CodemetaWriter

data/lib/bolognese/writers/crosscite_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module CrossciteWriter

data/lib/bolognese/writers/crossref_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module CrossrefWriter

data/lib/bolognese/writers/datacite_json_writer.rb

@@ -1,4 +1,6 @@
 module Bolognese
+  # frozen_string_literal: true
+  
   module Writers
     module DataciteJsonWriter
       def datacite_json

data/lib/bolognese/writers/datacite_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module DataciteWriter

data/lib/bolognese/writers/jats_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module JatsWriter

data/lib/bolognese/writers/rdf_xml_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module RdfXmlWriter

data/lib/bolognese/writers/ris_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module RisWriter

data/lib/bolognese/writers/schema_org_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module SchemaOrgWriter

data/lib/bolognese/writers/turtle_writer.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 module Bolognese
   module Writers
     module TurtleWriter

data/spec/array_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Array do

data/spec/author_utils_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/cli_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 require 'bolognese/cli'
 

data/spec/datacite_utils_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/doi_utils_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/find_from_format_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 require 'bolognese/cli'
 

data/spec/metadata_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/bibtex_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/citeproc_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/codemeta_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/crosscite_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/crossref_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/datacite_json_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/datacite_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/ris_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/readers/schema_org_reader_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/spec_helper.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'bundler/setup'
 Bundler.setup
 

data/spec/utils_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/bibtex_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/citation_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/citeproc_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/codemeta_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/crosscite_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/crossref_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/datacite_json_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/datacite_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/jats_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/rdf_xml_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/ris_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/schema_org_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

data/spec/writers/turtle_writer_spec.rb

@@ -1,3 +1,5 @@
+# frozen_string_literal: true
+
 require 'spec_helper'
 
 describe Bolognese::Metadata, vcr: true do

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: bolognese
 version: !ruby/object:Gem::Version
-  version: 0.10.21
+  version: 0.10.22
 platform: ruby
 authors:
 - Martin Fenner
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2018-06-21 00:00:00.000000000 Z
+date: 2018-07-04 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: maremma
@@ -469,7 +469,6 @@ files:
 - lib/bolognese/doi_utils.rb
 - lib/bolognese/metadata.rb
 - lib/bolognese/metadata_utils.rb
-- lib/bolognese/orcid.rb
 - lib/bolognese/pubmed.rb
 - lib/bolognese/readers/bibtex_reader.rb
 - lib/bolognese/readers/citeproc_reader.rb
@@ -862,7 +861,6 @@ files:
 - spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/Crossref_DOI.yml
 - spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/Dataset.yml
 - spec/metadata_spec.rb
-- spec/orcid_spec.rb
 - spec/readers/bibtex_reader_spec.rb
 - spec/readers/citeproc_reader_spec.rb
 - spec/readers/codemeta_reader_spec.rb

data/lib/bolognese/orcid.rb

@@ -1,24 +0,0 @@
-module Bolognese
-  class Orcid < Metadata
-    include Bolognese::Utils
-    # def get_orcid_metadata(orcid, options = {})
-    #   return {} if orcid.blank?
-
-    #   url = "https://pub.orcid.org/v2.0/#{orcid}/person"
-    #   response = Maremma.get(url, options.merge(accept: "json"))
-
-    #   name = response.body.fetch("data", {}).fetch("name", nil)
-    #   return { "errors" => 'Resource not found.' } unless name.present?
-
-    #   author = { "family" => name.fetch("family-name", {}).fetch("value", nil),
-    #              "given" => name.fetch("given-names", {}).fetch("value", nil) }
-
-    #   { "author" => [author],
-    #     "title" => "ORCID record for #{[author.fetch('given', nil), author.fetch('family', nil)].compact.join(' ')}",
-    #     "container-title" => "ORCID Registry",
-    #     "issued" => Time.now.year.to_s,
-    #     "URL" => orcid_as_url(orcid),
-    #     "type" => 'entry' }
-    # end
-  end
-end

data/spec/orcid_spec.rb

@@ -1,23 +0,0 @@
-require 'spec_helper'
-
-describe Bolognese::Metadata, vcr: true do
-  # context "orcid metadata" do
-  #   before(:each) { allow(Time).to receive(:now).and_return(Time.mktime(2015, 6, 25)) }
-
-  #   let(:orcid) { "0000-0002-0159-2197" }
-
-  #   it "get_orcid_metadata" do
-  #     response = subject.get_orcid_metadata(orcid)
-  #     expect(response["title"]).to eq("ORCID record for Jonathan A. Eisen")
-  #     expect(response["container-title"]).to eq("ORCID Registry")
-  #     expect(response["issued"]).to eq("2015")
-  #     expect(response["type"]).to eq("entry")
-  #     expect(response["URL"]).to eq("http://orcid.org/0000-0002-0159-2197")
-  #   end
-
-  #   it "get_orcid_metadata with not found error" do
-  #     response = subject.get_orcid_metadata("#{orcid}x")
-  #     expect(response).to eq("errors"=>"Resource not found.")
-  #   end
-  # end
-end