biovision-base 0.8.171029 → 0.9.171227

data/app/models/media_file.rb

@@ -0,0 +1,48 @@
+class MediaFile < ApplicationRecord
+  include HasOwner
+
+  PER_PAGE = 20
+
+  NAME_LIMIT        = 250
+  DESCRIPTION_LIMIT = 250
+
+  mount_uploader :file, MediaFileUploader
+  mount_uploader :snapshot, MediaSnapshotUploader
+
+  belongs_to :media_folder, optional: true, counter_cache: true
+  belongs_to :user, optional: true
+  belongs_to :agent, optional: true
+
+  after_initialize { self.uuid = SecureRandom.uuid if uuid.nil? }
+
+  before_validation { self.mime_type = mime_type.to_s[0..254] }
+  before_validation { self.original_name = original_name.to_s[0..254] }
+
+  validates_presence_of :name
+  validates_presence_of :file
+  validates_length_of :name, maximum: NAME_LIMIT
+  validates_length_of :description, maximum: DESCRIPTION_LIMIT
+  validates_uniqueness_of :name, scope: [:media_folder_id]
+  validates_uniqueness_of :uuid
+
+  scope :ordered_by_name, -> { order('name asc') }
+  scope :recent, -> { order('id desc') }
+
+  # @param [Integer] page
+  def self.page_for_administration(page = 1)
+    ordered_by_name.page(page).per(PER_PAGE)
+  end
+
+  def self.entity_parameters
+    %i(name description media_folder_id)
+  end
+
+  def self.creation_parameters
+    entity_parameters + %i(file snapshot mime_type original_name)
+  end
+
+  # @param [User] user
+  def editable_by?(user)
+    !locked && owned_by?(user) || UserPrivilege.user_has_privilege?(user, :chief_editor)
+  end
+end

data/app/models/media_folder.rb

@@ -0,0 +1,114 @@
+class MediaFolder < ApplicationRecord
+  include HasOwner
+
+  NAME_LIMIT = 100
+  MAX_DEPTH  = 3
+
+  mount_uploader :snapshot, MediaSnapshotUploader
+
+  belongs_to :user, optional: true
+  belongs_to :agent, optional: true
+  belongs_to :parent, class_name: MediaFolder.to_s, optional: true, touch: true
+  has_many :child_folders, class_name: MediaFolder.to_s, foreign_key: :parent_id, dependent: :destroy
+  has_many :media_files, dependent: :destroy
+
+  after_initialize { self.uuid = SecureRandom.uuid if uuid.nil? }
+  before_validation :calculate_depth
+  before_save { self.children_cache.uniq! }
+  after_save { parent.cache_children! unless parent.nil? }
+  after_create :cache_parents!
+
+  validates_presence_of :name
+  validates_uniqueness_of :name, scope: [:parent_id]
+  validates_length_of :name, maximum: NAME_LIMIT
+  validate :parent_is_not_too_deep
+
+  scope :ordered_by_name, -> { order('name asc') }
+  scope :for_tree, ->(parent_id = nil) { where(parent_id: parent_id).ordered_by_name }
+
+  # Allowed parameters for editing entity in controllers
+  #
+  # @return [Array<Symbol>]
+  def self.entity_parameters
+    %i(name snapshot)
+  end
+
+  # Allowed parameters for creating in controllers
+  #
+  # @return [Array<Symbol>]
+  def self.creation_parameters
+    entity_parameters + %i(parent_id)
+  end
+
+  def full_title
+    (parents.map { |parent| parent.name } + [name]).join ' / '
+  end
+
+  # @return [Array<Integer>]
+  def parent_ids
+    parents_cache.split(',').compact.map(&:to_i)
+  end
+
+  # Parent branch ids including current id
+  #
+  # @return [Array<Integer>]
+  def branch_ids
+    parents_cache.split(',').map(&:to_i).reject { |i| i < 1 }.uniq + [id]
+  end
+
+  # Child branch (with subbranches) ids starting with current id
+  #
+  # @return [Array<Integer>]
+  def subbranch_ids
+    [id] + children_cache
+  end
+
+  def parents
+    return [] if parents_cache.blank?
+    MediaFolder.where(id: parent_ids).order('id asc')
+  end
+
+  # Total media file count for all children and current entity
+  #
+  # @return [Integer]
+  def file_count
+    MediaFolder.where(id: subbranch_ids).sum(:media_files_count)
+  end
+
+  def can_be_deleted?
+    file_count < 1
+  end
+
+  # @param [User] user
+  def editable_by?(user)
+    owned_by?(user) || UserPrivilege.user_has_privilege?(user, :chief_editor)
+  end
+
+  def cache_parents!
+    return if parent.nil?
+    self.parents_cache = "#{parent.parents_cache},#{parent_id}".gsub(/\A,/, '')
+    save!
+  end
+
+  def cache_children!
+    child_folders.order('id asc').each do |child|
+      self.children_cache += [child.id] + child.children_cache
+    end
+    save!
+  end
+
+  private
+
+  def calculate_depth
+    return if parent.nil?
+    self.depth = parent.depth + 1
+  end
+
+  def parent_is_not_too_deep
+    return if parent.nil?
+    if parent.depth >= MAX_DEPTH
+      error = I18n.t('activerecord.errors.models.media_folder.attributes.parent.is_too_deep')
+      errors.add(:parent, error)
+    end
+  end
+end

data/app/models/metric.rb

@@ -4,10 +4,13 @@ class Metric < ApplicationRecord
   DESCRIPTION_LIMIT = 250
   PERIOD_RANGE      = (1..365)
 
+  METRIC_HTTP_400 = 'errors.http.bad_request.hit'
   METRIC_HTTP_401 = 'errors.http.unauthorized.hit'
+  METRIC_HTTP_403 = 'errors.http.forbidden.hit'
   METRIC_HTTP_404 = 'errors.http.not_found.hit'
+  METRIC_HTTP_422 = 'errors.http.unprocessable_entity.hit'
+  METRIC_HTTP_500 = 'errors.http.internal_server_error.hit'
   METRIC_HTTP_503 = 'errors.http.service_unavailable.hit'
-  METRIC_HTTP_505 = 'errors.http.internal_server_error.hit'
 
   has_many :metric_values, dependent: :destroy
 

data/app/models/privilege_group.rb

@@ -23,7 +23,7 @@ class PrivilegeGroup < ApplicationRecord
   def self.ids(slug)
     instance = find_by(slug: slug.to_s)
     return [] if instance.nil?
-    instance.privileges.map(&:ids).flatten.uniq
+    instance.privileges.map(&:branch_ids).flatten.uniq
   end
 
   def self.entity_parameters

data/app/uploaders/media_file_uploader.rb

@@ -0,0 +1,30 @@
+class MediaFileUploader < CarrierWave::Uploader::Base
+  include CarrierWave::MiniMagick
+  include CarrierWave::BombShelter
+
+  # Choose what kind of storage to use for this uploader:
+  storage :file
+  # storage :fog
+
+  # Override the directory where uploaded files will be stored.
+  # This is a sensible default for uploaders that are meant to be mounted:
+  def store_dir
+    "uploads/#{model.class.to_s.underscore}/#{mounted_as}/#{model.id/10000.floor}/#{model.id/100.floor}/#{model.id}"
+  end
+
+  version :medium_2x do
+    resize_to_fit 1280, 1280
+  end
+
+  version :medium, from_version: :medium_2x do
+    resize_to_fit 640, 640
+  end
+
+  def extension_whitelist
+    %w(jpg jpeg gif png)
+  end
+
+  def filename
+    "#{model.uuid}.#{file.extension}" if original_filename
+  end
+end

data/app/uploaders/media_snapshot_uploader.rb

@@ -0,0 +1,32 @@
+class MediaSnapshotUploader < CarrierWave::Uploader::Base
+  include CarrierWave::MiniMagick
+  include CarrierWave::BombShelter
+
+  # Choose what kind of storage to use for this uploader:
+  storage :file
+  # storage :fog
+
+  def store_dir
+    "uploads/#{model.class.to_s.underscore}/#{mounted_as}/#{model.id/10000.floor}/#{model.id/100.floor}/#{model.id}"
+  end
+
+  def default_url(*args)
+    ActionController::Base.helpers.asset_path('biovision/base/placeholders/file.svg')
+  end
+
+  version :preview_2x do
+    resize_to_fit(160, 160)
+  end
+
+  version :preview, from_version: :preview_2x do
+    resize_to_fit(80, 80)
+  end
+
+  def extension_whitelist
+    %w(jpg jpeg png)
+  end
+
+  def filename
+    "#{model.uuid}.#{file.extension}" if original_filename
+  end
+end

data/app/views/admin/feedback_requests/_nav_item.html.erb

@@ -0,0 +1,2 @@
+<div><%= link_to(t('.text'), admin_feedback_requests_path) %></div>
+<div class="description"><%= t('.description') %></div>

data/app/views/admin/feedback_requests/entity/_in_list.html.erb

@@ -0,0 +1,18 @@
+<div class="data">
+  <div><%= entity.name %></div>
+  <div class="info">
+    <%= entity.phone %>
+    <%= entity.email %>
+  </div>
+  <div class="secondary info">
+    <%= time_tag entity.created_at %><br/>
+    <%= entity.ip %>
+  </div>
+  <% unless entity.comment.blank? %>
+    <div class="secondary info">
+      <%= simple_format entity.comment %>
+    </div>
+  <% end %>
+
+  <%= render partial: 'shared/admin/toggleable', locals: { entity: entity, url: toggle_admin_feedback_request_path(entity.id) } %>
+</div>

data/app/views/admin/feedback_requests/index.html.erb

@@ -0,0 +1,16 @@
+<% content_for :meta_title, t('.title', page: current_page) %>
+<% content_for :breadcrumbs do %>
+    <span><%= t('admin.feedback_requests.nav_item.text') %></span>
+<% end %>
+
+<article>
+  <h1><%= t('.heading') %></h1>
+
+  <ul class="actions">
+    <li><%= back_icon(admin_path) %></li>
+  </ul>
+
+  <%= paginate @collection %>
+  <%= render partial: 'shared/admin/list', locals: { collection: @collection } %>
+  <%= paginate @collection %>
+</article>

data/app/views/admin/index/_biovision_base.html.erb

@@ -0,0 +1,6 @@
+<%= render 'admin/index/dashboard/settings' %>
+<%= render 'admin/index/dashboard/biovision_track' %>
+<%= render 'admin/index/dashboard/biovision_region' %>
+<%= render 'admin/index/dashboard/biovision_user' %>
+<%= render 'admin/index/dashboard/editorial' %>
+<%= render 'admin/index/dashboard/biovision_feedback' %>

data/app/views/admin/index/dashboard/_biovision_feedback.html.erb

@@ -0,0 +1,9 @@
+<% if current_user_has_privilege?(:feedback_manager) %>
+  <nav>
+    <div class="heading"><%= t('.heading') %></div>
+
+    <ul>
+      <li><%= render 'admin/feedback_requests/nav_item' %></li>
+    </ul>
+  </nav>
+<% end %>

data/app/views/admin/index/dashboard/_biovision_region.html.erb

@@ -0,0 +1,8 @@
+<% if current_user_in_group?(:region_managers) %>
+  <nav>
+    <div class="heading"><%= t('.heading') %></div>
+    <ul>
+      <li><%= render 'admin/regions/nav_item' %></li>
+    </ul>
+  </nav>
+<% end %>

data/app/views/admin/index/dashboard/_biovision_track.html.erb

@@ -0,0 +1,8 @@
+<% if current_user_has_privilege?(:metrics_manager) %>
+  <nav>
+    <div class="heading"><%= t('.heading') %></div>
+    <ul>
+      <li><%= render 'admin/metrics/nav_item' %></li>
+    </ul>
+  </nav>
+<% end %>

data/app/views/admin/index/dashboard/_biovision_user.html.erb

@@ -0,0 +1,13 @@
+<% if current_user_has_privilege?(:administrator) %>
+  <nav>
+    <div class="heading"><%= t('.heading') %></div>
+    <ul>
+      <li><%= render 'admin/users/nav_item' %></li>
+      <li><%= render 'admin/privileges/nav_item' %></li>
+      <li><%= render 'admin/privilege_groups/nav_item' %></li>
+      <li><%= render 'admin/login_attempts/nav_item' %></li>
+      <li><%= render 'admin/tokens/nav_item' %></li>
+      <li><%= render 'admin/codes/nav_item' %></li>
+    </ul>
+  </nav>
+<% end %>

data/app/views/admin/index/dashboard/_editorial.html.erb

@@ -0,0 +1,12 @@
+<% if current_user_in_group?(:editors) %>
+  <nav>
+    <div class="heading"><%= t('.heading') %></div>
+    <ul>
+      <% if current_user_has_privilege?(:chief_editor) %>
+        <li><%= render 'admin/editable_pages/nav_item' %></li>
+      <% end %>
+      <li><%= render 'admin/media_folders/nav_item' %></li>
+      <li><%= render 'admin/media_files/nav_item' %></li>
+    </ul>
+  </nav>
+<% end %>

data/app/views/admin/index/dashboard/_settings.html.erb

@@ -0,0 +1,9 @@
+<% if current_user_has_privilege?(:administrator) %>
+  <nav>
+    <div class="heading"><%= t('.heading') %></div>
+
+    <ul>
+      <li><%= render 'admin/stored_values/nav_item' %></li>
+    </ul>
+  </nav>
+<% end %>

data/app/views/admin/index/index.html.erb

@@ -4,27 +4,7 @@
   <h1><%= t('.heading') %></h1>
 
   <div class="dashboard">
-    <nav>
-      <ul>
-        <% if current_user_has_privilege?(:administrator) %>
-            <li><%= render 'admin/users/nav_item' %></li>
-            <li><%= render 'admin/login_attempts/nav_item' %></li>
-            <li><%= render 'admin/tokens/nav_item' %></li>
-            <li><%= render 'admin/codes/nav_item' %></li>
-            <li><%= render 'admin/privileges/nav_item' %></li>
-            <li><%= render 'admin/privilege_groups/nav_item' %></li>
-            <li><%= render 'admin/stored_values/nav_item' %></li>
-        <% end %>
-        <% if current_user_in_group?(:region_managers) %>
-            <li><%= render 'admin/regions/nav_item' %></li>
-        <% end %>
-        <% if current_user_has_privilege?(:metrics_manager) %>
-            <li><%= render 'admin/metrics/nav_item' %></li>
-        <% end %>
-        <% if current_user_has_privilege?(:chief_editor) %>
-            <li><%= render 'admin/editable_pages/nav_item' %></li>
-        <% end %>
-      </ul>
-    </nav>
+    <%= render 'admin/index/biovision_base' %>
+    <%= render 'admin/index/custom_dashboard' %>
   </div>
 </article>

data/app/views/admin/media_files/_nav_item.html.erb

@@ -0,0 +1,2 @@
+<div><%= link_to t('.text'), admin_media_files_path %></div>
+<div class="description"><%= t('.description') %></div>

data/app/views/admin/media_files/entity/_in_list.html.erb

@@ -0,0 +1,26 @@
+<div class="image">
+  <%= media_snapshot_preview(entity) %>
+</div>
+<div class="data">
+  <div><%= admin_media_file_link(entity) %></div>
+  <div class="info">
+    <%= editor_user_link(entity.user) %>,
+    <%= time_tag(entity.created_at) %>
+  </div>
+  <% unless entity.description.blank? %>
+    <div class="secondary info">
+      <%= entity.description %>
+    </div>
+  <% end %>
+  <% unless entity.media_folder.nil? %>
+    <div class="secondary info">
+      <%= admin_media_folder_link(entity.media_folder, entity.media_folder.full_title) %>
+    </div>
+  <% end %>
+
+  <ul class="actions">
+    <% if entity.editable_by?(current_user) %>
+      <li><%= edit_icon(edit_media_file_path(entity.id)) %></li>
+    <% end %>
+  </ul>
+</div>

data/app/views/admin/media_files/index.html.erb

@@ -0,0 +1,17 @@
+<% content_for :meta_title, t('.title', page: current_page) %>
+<% content_for :breadcrumbs do %>
+  <span><%= t('admin.media_files.nav_item.text') %></span>
+<% end %>
+
+<article>
+  <h1><%= t('.heading') %></h1>
+
+  <ul class="actions">
+    <li><%= back_icon(admin_path) %></li>
+    <li><%= create_icon(new_media_file_path) %></li>
+  </ul>
+
+  <%= paginate @collection %>
+  <%= render partial: 'shared/admin/list', locals: { collection: @collection } %>
+  <%= paginate @collection %>
+</article>

data/app/views/admin/media_files/show.html.erb

@@ -0,0 +1,60 @@
+<% content_for :meta_title, @entity.name %>
+<% content_for :breadcrumbs do %>
+  <%= link_to(t('admin.media_files.nav_item.text'), admin_media_files_path) %>
+  <span><%= @entity.name %></span>
+<% end %>
+
+<article>
+  <h1><%= @entity.name %></h1>
+
+  <ul class="actions">
+    <li>
+      <% if @entity.media_folder.nil? %>
+        <%= return_icon(admin_media_files_path) %>
+      <% else %>
+        <%= return_icon(admin_media_folder_path(@entity.media_folder_id)) %>
+      <% end %>
+    </li>
+    <li><%= edit_icon(edit_media_file_path(@entity.id)) %></li>
+  </ul>
+
+
+  <dl>
+    <dt><%= t('activerecord.attributes.media_file.file') %></dt>
+    <dd>
+      <figure role="group">
+        <%= media_file_medium(@entity) %>
+        <figcaption>
+          <%= t('activerecord.attributes.media_file.file') %>
+        </figcaption>
+      </figure>
+
+    </dd>
+    <% unless @entity.media_folder.nil? %>
+      <dt><%= t('activerecord.attributes.media_file.media_folder') %></dt>
+      <dd><%= admin_media_folder_link(@entity.media_folder, @entity.media_folder.full_title) %></dd>
+    <% end %>
+
+    <dt><%= t('activerecord.attributes.media_file.name') %></dt>
+    <dd><%= @entity.name %></dd>
+
+    <% unless @entity.description.blank? %>
+      <dt><%= t('activerecord.attributes.media_file.description') %></dt>
+      <dd><%= @entity.description %></dd>
+    <% end %>
+
+    <dt><%= t('activerecord.attributes.media_file.user') %></dt>
+    <dd><%= editor_user_link(@entity.user) %></dd>
+
+    <dt><%= t(:created_at) %></dt>
+    <dd><%= time_tag(@entity.created_at) %></dd>
+
+    <dt><%= t(:updated_at) %></dt>
+    <dd><%= time_tag(@entity.updated_at) %></dd>
+
+    <dt><%= t('activerecord.attributes.media_file.uuid') %></dt>
+    <dd><%= @entity.uuid %></dd>
+  </dl>
+
+  <%= render partial: 'shared/track', locals: { item: @entity } %>
+</article>

data/app/views/admin/media_folders/_nav_item.html.erb

@@ -0,0 +1,2 @@
+<div><%= link_to t('.text'), admin_media_folders_path %></div>
+<div class="description"><%= t('.description') %></div>

data/app/views/admin/media_folders/entity/_in_list.html.erb

@@ -0,0 +1,32 @@
+<div class="image">
+  <%= media_snapshot_preview(entity) %>
+</div>
+<div class="data">
+  <div><%= admin_media_folder_link(entity) %></div>
+  <div class="info">
+    <%= t(:created_at) %>:
+    <%= time_tag(entity.created_at) %><br/>
+    <%= t('activerecord.attributes.media_folder.user') %>:
+    <%= editor_user_link(entity.user) %>
+  </div>
+  <div class="secondary info">
+    <%= link_to(t(:media_file_count, count: entity.media_files_count), files_admin_media_folder_path(entity.id)) %>
+    (<%= t(:total) %> <%= entity.file_count %>)
+  </div>
+  <% if entity.children_cache.any? %>
+    <div class="children">
+      <%=
+        button_tag(t(:child_media_folder_count, count: entity.child_folders.count),
+                   type:  :button,
+                   class: 'button-expand children-loader',
+                   data:  { url: admin_media_folders_path(parent_id: entity.id) })
+      %>
+    </div>
+  <% end %>
+
+  <% if entity.editable_by?(current_user) %>
+    <ul class="actions">
+      <li><%= edit_icon(edit_media_folder_path(entity.id)) %></li>
+    </ul>
+  <% end %>
+</div>

data/app/views/admin/media_folders/files.html.erb

@@ -0,0 +1,28 @@
+<% content_for :meta_title, t('.title', name: @entity.name, page: current_page) %>
+<% content_for :breadcrumbs do %>
+  <%= link_to(t('admin.media_folders.nav_item.text'), admin_media_folders_path) %>
+  <% @entity.parents.each do |parent| %>
+    <%= admin_media_folder_link(parent) %>
+  <% end %>
+  <%= admin_media_folder_link(@entity) %>
+  <span><%= t('admin.media_folders.show.media_files') %></span>
+<% end %>
+
+<article>
+  <h1><%= @entity.full_title %></h1>
+  <h2><%= t(:media_file_count, count: @entity.media_files_count) %></h2>
+
+  <ul class="actions">
+    <li><%= return_icon(admin_media_folder_path(@entity.id)) %></li>
+  </ul>
+
+  <%= paginate @collection %>
+  <%= render partial: 'shared/admin/list', locals: { collection: @collection } %>
+  <%= paginate @collection %>
+
+  <section>
+    <h2><%= t('media_files.new.heading') %></h2>
+
+    <%= render partial: 'media_files/form', locals: { entity: @entity.media_files.new } %>
+  </section>
+</article>

data/app/views/admin/media_folders/index.html.erb

@@ -0,0 +1,21 @@
+<% content_for :meta_title, t('.title') %>
+<% content_for :breadcrumbs do %>
+  <span><%= t('admin.media_folders.nav_item.text') %></span>
+<% end %>
+
+<article>
+  <h1><%= t('.heading') %></h1>
+
+  <ul class="actions">
+    <li><%= back_icon(admin_path) %></li>
+    <li><%= create_icon(new_media_folder_path) %></li>
+  </ul>
+
+  <%= render partial: 'shared/admin/list', locals: { collection: @collection } %>
+
+  <section>
+    <h2><%= t('media_folders.new.heading') %></h2>
+
+    <%= render partial: 'media_folders/form', locals: { entity: MediaFolder.new } %>
+  </section>
+</article>