biodiversity19 0.6.0 → 0.6.1
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data/Rakefile
CHANGED
@@ -27,7 +27,7 @@ begin
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|
27
27
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gem.authors = ["Dmitry Mozzherin"]
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28
28
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gem.has_rdoc = false
|
29
29
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gem.bindir = 'bin'
|
30
|
-
gem.executables = ['nnparse']
|
30
|
+
gem.executables = ['nnparse', 'parserver']
|
31
31
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gem.add_dependency('treetop')
|
32
32
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gem.add_dependency('json') if RUBY_VERSION.split(".")[0..1].join('').to_i < 19
|
33
33
|
gem.add_development_dependency "rspec"
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data/VERSION
CHANGED
@@ -1 +1 @@
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|
1
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-
0.6.
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1
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+
0.6.1
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@@ -782,7 +782,7 @@ grammar ScientificNameClean
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|
782
782
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783
783
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784
784
|
rule simple_authorship
|
785
|
-
a:authors_names space [,]? space b:year?
|
785
|
+
a:authors_names space [,]? space b:year? {
|
786
786
|
def value
|
787
787
|
a.value + " " + b.value
|
788
788
|
end
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@@ -115,7 +115,7 @@ grammar ScientificNameDirty
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|
115
115
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end
|
116
116
|
|
117
117
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rule latin_word
|
118
|
-
a:[a-z
|
118
|
+
a:[a-z\-ëæœàâåãäáçčéèíìïňññóòôøõöúùüŕřŗššşž] b:valid_name_letters {
|
119
119
|
def value
|
120
120
|
res = ''
|
121
121
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text_value.split('').each do |l|
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@@ -123,14 +123,14 @@ grammar ScientificNameDirty
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|
123
123
|
l = 'oe' if l == 'œ'
|
124
124
|
res << l
|
125
125
|
end
|
126
|
-
res.tr('
|
127
|
-
'
|
126
|
+
res.tr('àâåãäáçčéèíìïňññóòôøõöúùüŕřŗššşž',
|
127
|
+
'aaaaaacceeiiinnnoooooouuurrrsssz')
|
128
128
|
end
|
129
129
|
}
|
130
130
|
end
|
131
131
|
|
132
132
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rule valid_name_letters
|
133
|
-
[a-z
|
133
|
+
[a-z\-ëæœàâåãäáçčéèíìïňññóòôøõöúùüŕřŗššşž]+ {
|
134
134
|
def value
|
135
135
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res = ''
|
136
136
|
text_value.split('').each do |l|
|
@@ -138,8 +138,8 @@ grammar ScientificNameDirty
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|
138
138
|
l = 'oe' if l == 'œ'
|
139
139
|
res << l
|
140
140
|
end
|
141
|
-
res.tr('
|
142
|
-
'
|
141
|
+
res.tr('àâåãäáçčéèíìïňññóòôøõöúùüŕřŗššşž',
|
142
|
+
'aaaaaacceeiiinnnoooooouuurrrsssz')
|
143
143
|
end
|
144
144
|
}
|
145
145
|
end
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metadata
CHANGED
@@ -1,7 +1,13 @@
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1
1
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--- !ruby/object:Gem::Specification
|
2
2
|
name: biodiversity19
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
|
4
|
+
hash: 5
|
5
|
+
prerelease: false
|
6
|
+
segments:
|
7
|
+
- 0
|
8
|
+
- 6
|
9
|
+
- 1
|
10
|
+
version: 0.6.1
|
5
11
|
platform: ruby
|
6
12
|
authors:
|
7
13
|
- Dmitry Mozzherin
|
@@ -9,53 +15,42 @@ autorequire:
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|
9
15
|
bindir: bin
|
10
16
|
cert_chain: []
|
11
17
|
|
12
|
-
date: 2010-
|
13
|
-
default_executable:
|
18
|
+
date: 2010-05-20 00:00:00 -04:00
|
19
|
+
default_executable:
|
14
20
|
dependencies:
|
15
21
|
- !ruby/object:Gem::Dependency
|
16
22
|
name: treetop
|
17
|
-
|
18
|
-
|
19
|
-
|
20
|
-
requirements:
|
21
|
-
- - ">="
|
22
|
-
- !ruby/object:Gem::Version
|
23
|
-
version: "0"
|
24
|
-
version:
|
25
|
-
- !ruby/object:Gem::Dependency
|
26
|
-
name: rspec
|
27
|
-
type: :development
|
28
|
-
version_requirement:
|
29
|
-
version_requirements: !ruby/object:Gem::Requirement
|
23
|
+
prerelease: false
|
24
|
+
requirement: &id001 !ruby/object:Gem::Requirement
|
25
|
+
none: false
|
30
26
|
requirements:
|
31
27
|
- - ">="
|
32
28
|
- !ruby/object:Gem::Version
|
29
|
+
hash: 3
|
30
|
+
segments:
|
31
|
+
- 0
|
33
32
|
version: "0"
|
34
|
-
version:
|
35
|
-
- !ruby/object:Gem::Dependency
|
36
|
-
name: treetop
|
37
33
|
type: :runtime
|
38
|
-
|
39
|
-
version_requirements: !ruby/object:Gem::Requirement
|
40
|
-
requirements:
|
41
|
-
- - ">="
|
42
|
-
- !ruby/object:Gem::Version
|
43
|
-
version: "0"
|
44
|
-
version:
|
34
|
+
version_requirements: *id001
|
45
35
|
- !ruby/object:Gem::Dependency
|
46
36
|
name: rspec
|
47
|
-
|
48
|
-
|
49
|
-
|
37
|
+
prerelease: false
|
38
|
+
requirement: &id002 !ruby/object:Gem::Requirement
|
39
|
+
none: false
|
50
40
|
requirements:
|
51
41
|
- - ">="
|
52
42
|
- !ruby/object:Gem::Version
|
43
|
+
hash: 3
|
44
|
+
segments:
|
45
|
+
- 0
|
53
46
|
version: "0"
|
54
|
-
|
47
|
+
type: :development
|
48
|
+
version_requirements: *id002
|
55
49
|
description: Tools for biodiversity informatics
|
56
50
|
email: dmozzherin@gmail.com
|
57
51
|
executables:
|
58
52
|
- nnparse
|
53
|
+
- parserver
|
59
54
|
extensions: []
|
60
55
|
|
61
56
|
extra_rdoc_files:
|
@@ -88,38 +83,46 @@ files:
|
|
88
83
|
- spec/parser/spec_helper.rb
|
89
84
|
- spec/parser/test_data.txt
|
90
85
|
- spec/spec_helper.rb
|
91
|
-
has_rdoc:
|
86
|
+
has_rdoc: true
|
92
87
|
homepage: http://github.com/dimus/biodiversity
|
88
|
+
licenses: []
|
89
|
+
|
93
90
|
post_install_message:
|
94
91
|
rdoc_options:
|
95
92
|
- --charset=UTF-8
|
96
93
|
require_paths:
|
97
94
|
- lib
|
98
95
|
required_ruby_version: !ruby/object:Gem::Requirement
|
96
|
+
none: false
|
99
97
|
requirements:
|
100
98
|
- - ">="
|
101
99
|
- !ruby/object:Gem::Version
|
100
|
+
hash: 3
|
101
|
+
segments:
|
102
|
+
- 0
|
102
103
|
version: "0"
|
103
|
-
version:
|
104
104
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
105
|
+
none: false
|
105
106
|
requirements:
|
106
107
|
- - ">="
|
107
108
|
- !ruby/object:Gem::Version
|
109
|
+
hash: 3
|
110
|
+
segments:
|
111
|
+
- 0
|
108
112
|
version: "0"
|
109
|
-
version:
|
110
113
|
requirements: []
|
111
114
|
|
112
115
|
rubyforge_project:
|
113
|
-
rubygems_version: 1.3.
|
116
|
+
rubygems_version: 1.3.7
|
114
117
|
signing_key:
|
115
|
-
specification_version:
|
118
|
+
specification_version: 3
|
116
119
|
summary: Parser of scientific names
|
117
120
|
test_files:
|
118
|
-
- spec/
|
119
|
-
- spec/parser/scientific_name_dirty.spec.rb
|
120
|
-
- spec/parser/scientific_name.spec.rb
|
121
|
-
- spec/parser/scientific_name_clean.spec.rb
|
122
|
-
- spec/parser/spec_helper.rb
|
121
|
+
- spec/spec_helper.rb
|
123
122
|
- spec/guid/lsid.spec.rb
|
124
123
|
- spec/biodiversity_spec.rb
|
125
|
-
- spec/spec_helper.rb
|
124
|
+
- spec/parser/spec_helper.rb
|
125
|
+
- spec/parser/scientific_name.spec.rb
|
126
|
+
- spec/parser/scientific_name_clean.spec.rb
|
127
|
+
- spec/parser/scientific_name_canonical.spec.rb
|
128
|
+
- spec/parser/scientific_name_dirty.spec.rb
|