biodiversity 3.1.10 → 3.2.0

data/spec/guid/lsid.spec.rb

@@ -1,5 +1,3 @@
-require_relative '../spec_helper'
-
 describe LsidResolver do
   describe '.resolve' do
     let(:lsid) { 'urn:lsid:ubio.org:classificationbank:2232671' }

data/spec/parser/scientific_name_canonical_spec.rb

@@ -1,5 +1,4 @@
 # encoding: UTF-8
-require_relative "../spec_helper"
 
 describe ScientificNameCanonical do
   before(:all) do

data/spec/parser/scientific_name_clean_spec.rb

@@ -1,6 +1,4 @@
 # encoding: UTF-8
-require_relative "../spec_helper"
-
 
 describe ScientificNameClean do
   before(:all) do

data/spec/parser/scientific_name_dirty_spec.rb

@@ -1,5 +1,4 @@
 # encoding: UTF-8
-require_relative '../spec_helper'
 
 describe ScientificNameDirty do
   before(:all) do

data/spec/parser/scientific_name_spec.rb

@@ -1,7 +1,6 @@
 # encoding: utf-8
 
 #NOTE: this spec needs compiled treetop files.
-require_relative '../spec_helper'
 
 describe ScientificNameParser do
   before(:all) do
@@ -48,8 +47,10 @@ describe ScientificNameParser do
 
   it 'generates reasonable output if parser failed' do
     sn = 'ddd sljlkj 3223452432'
-    expect(json(sn)).to eq '{"scientificName":{"parsed":false,' +
-      '"parser_version":"test_version","verbatim":"ddd sljlkj 3223452432"}}'
+    expect(json(sn)).to eq "{\"scientificName\":" \
+      "{\"id\":\"3ebf93d9-b62a-5198-8715-4c8302f0a5d7\",\"parsed\":false," \
+      "\"parser_version\":\"test_version\"," \
+      "\"verbatim\":\"ddd sljlkj 3223452432\"}}"
   end
 
   it 'shows version when the flag :show_version set to true' do
@@ -138,7 +139,7 @@ describe ParallelParser do
     res = pparser.parse(names)
     names.each_with_index do |name, i|
       expect(res[name].is_a?(Hash)).to be true
-      expect(res[name][:scientificName][:verbatim]).to eq name.strip
+      expect(res[name][:scientificName][:verbatim]).to eq name
     end
   end
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: biodiversity
 version: !ruby/object:Gem::Version
-  version: 3.1.10
+  version: 3.2.0
 platform: ruby
 authors:
 - Dmitry Mozzherin
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2015-05-14 00:00:00.000000000 Z
+date: 2015-06-01 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: treetop
@@ -52,6 +52,20 @@ dependencies:
     - - "~>"
       - !ruby/object:Gem::Version
         version: '1.4'
+- !ruby/object:Gem::Dependency
+  name: gn_uuid
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.5'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.5'
 - !ruby/object:Gem::Dependency
   name: bundler
   requirement: !ruby/object:Gem::Requirement
@@ -146,6 +160,7 @@ extra_rdoc_files: []
 files:
 - ".document"
 - ".gitignore"
+- ".rspec"
 - ".rubocop.yml"
 - ".ruby-version"
 - ".travis.yml"
@@ -172,7 +187,9 @@ files:
 - pkg/.gitkeep
 - spec/biodiversity_spec.rb
 - spec/files/lsid.xml
+- spec/files/t.rb
 - spec/files/test_data.txt
+- spec/files/test_data.txt.new
 - spec/files/todo.txt
 - spec/guid/lsid.spec.rb
 - spec/parser/scientific_name_canonical_spec.rb
@@ -200,7 +217,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 2.2.2
+rubygems_version: 2.2.3
 signing_key: 
 specification_version: 4
 summary: Parser of scientific names