biodiversity 0.5.14

data/lib/biodiversity/parser/scientific_name_dirty.rb

@@ -0,0 +1,1056 @@
+# encoding: UTF-8
+module ScientificNameDirty
+  include Treetop::Runtime
+
+  def root
+    @root || :root
+  end
+
+  include ScientificNameClean
+
+  def _nt_root
+    start_index = index
+    if node_cache[:root].has_key?(index)
+      cached = node_cache[:root][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    r0 = super
+
+    node_cache[:root][start_index] = r0
+
+    r0
+  end
+
+  module ScientificName50
+    def a
+      elements[0]
+    end
+
+    def garbage
+      elements[1]
+    end
+  end
+
+  module ScientificName51
+    def value
+      a.value
+    end
+    
+    def canonical
+      a.canonical
+    end
+    
+    def pos
+      a.pos
+    end
+    
+    def details
+      a.details
+    end
+  end
+
+  def _nt_scientific_name_5
+    start_index = index
+    if node_cache[:scientific_name_5].has_key?(index)
+      cached = node_cache[:scientific_name_5][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    r2 = _nt_scientific_name_4
+    s1 << r2
+    if r2
+      r3 = _nt_garbage
+      s1 << r3
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(ScientificName50)
+      r1.extend(ScientificName51)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      r4 = super
+      if r4
+        r0 = r4
+      else
+        @index = i0
+        r0 = nil
+      end
+    end
+
+    node_cache[:scientific_name_5][start_index] = r0
+
+    r0
+  end
+
+  module Infraspecies0
+    def a
+      elements[0]
+    end
+
+    def space
+      elements[1]
+    end
+
+    def b
+      elements[2]
+    end
+  end
+
+  module Infraspecies1
+    def value
+      a.value + " " + b.value
+    end
+
+    def canonical
+      a.canonical
+    end
+
+    def pos
+      a.pos.merge(b.pos)
+    end
+
+    def details
+      {:infraspecies => a.details[:infraspecies].merge(b.details)}
+    end
+  end
+
+  module Infraspecies2
+    def a
+      elements[0]
+    end
+
+    def space
+      elements[1]
+    end
+
+    def epitheton_authorship_inconsistencies
+      elements[2]
+    end
+
+    def space
+      elements[3]
+    end
+
+    def b
+      elements[4]
+    end
+  end
+
+  module Infraspecies3
+    def value
+      a.value + " " + b.value
+    end
+
+    def canonical
+      a.canonical
+    end
+
+    def pos
+      a.pos.merge(b.pos)
+    end
+
+    def details
+      {:infraspecies => a.details[:infraspecies].merge(b.details)}
+    end
+  end
+
+  def _nt_infraspecies
+    start_index = index
+    if node_cache[:infraspecies].has_key?(index)
+      cached = node_cache[:infraspecies][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    r2 = _nt_infraspecies_epitheton
+    s1 << r2
+    if r2
+      r3 = _nt_space
+      s1 << r3
+      if r3
+        r4 = _nt_year
+        s1 << r4
+      end
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(Infraspecies0)
+      r1.extend(Infraspecies1)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      i5, s5 = index, []
+      r6 = _nt_infraspecies_epitheton
+      s5 << r6
+      if r6
+        r7 = _nt_space
+        s5 << r7
+        if r7
+          r8 = _nt_epitheton_authorship_inconsistencies
+          s5 << r8
+          if r8
+            r9 = _nt_space
+            s5 << r9
+            if r9
+              r10 = _nt_authorship
+              s5 << r10
+            end
+          end
+        end
+      end
+      if s5.last
+        r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
+        r5.extend(Infraspecies2)
+        r5.extend(Infraspecies3)
+      else
+        @index = i5
+        r5 = nil
+      end
+      if r5
+        r0 = r5
+      else
+        r11 = super
+        if r11
+          r0 = r11
+        else
+          @index = i0
+          r0 = nil
+        end
+      end
+    end
+
+    node_cache[:infraspecies][start_index] = r0
+
+    r0
+  end
+
+  module Species0
+    def a
+      elements[0]
+    end
+
+    def space
+      elements[1]
+    end
+
+    def b
+      elements[2]
+    end
+  end
+
+  module Species1
+    def value
+      a.value + " " + b.value
+    end
+  
+    def canonical
+      a.canonical
+    end
+  
+    def pos
+      a.pos.merge(b.pos)
+    end
+  
+    def details
+      {:species => a.details[:species].merge(b.details)}
+    end
+  end
+
+  def _nt_species
+    start_index = index
+    if node_cache[:species].has_key?(index)
+      cached = node_cache[:species][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    r2 = _nt_species_epitheton
+    s1 << r2
+    if r2
+      r3 = _nt_space
+      s1 << r3
+      if r3
+        r4 = _nt_year
+        s1 << r4
+      end
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(Species0)
+      r1.extend(Species1)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      r5 = super
+      if r5
+        r0 = r5
+      else
+        @index = i0
+        r0 = nil
+      end
+    end
+
+    node_cache[:species][start_index] = r0
+
+    r0
+  end
+
+  module RightParen0
+    def space
+      elements[1]
+    end
+
+  end
+
+  def _nt_right_paren
+    start_index = index
+    if node_cache[:right_paren].has_key?(index)
+      cached = node_cache[:right_paren][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    if has_terminal?(")", false, index)
+      r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
+      @index += 1
+    else
+      terminal_parse_failure(")")
+      r2 = nil
+    end
+    s1 << r2
+    if r2
+      r3 = _nt_space
+      s1 << r3
+      if r3
+        if has_terminal?(")", false, index)
+          r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
+          @index += 1
+        else
+          terminal_parse_failure(")")
+          r4 = nil
+        end
+        s1 << r4
+      end
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(RightParen0)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      r5 = super
+      if r5
+        r0 = r5
+      else
+        @index = i0
+        r0 = nil
+      end
+    end
+
+    node_cache[:right_paren][start_index] = r0
+
+    r0
+  end
+
+  module LeftParen0
+    def space
+      elements[1]
+    end
+
+  end
+
+  def _nt_left_paren
+    start_index = index
+    if node_cache[:left_paren].has_key?(index)
+      cached = node_cache[:left_paren][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    if has_terminal?("(", false, index)
+      r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
+      @index += 1
+    else
+      terminal_parse_failure("(")
+      r2 = nil
+    end
+    s1 << r2
+    if r2
+      r3 = _nt_space
+      s1 << r3
+      if r3
+        if has_terminal?("(", false, index)
+          r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
+          @index += 1
+        else
+          terminal_parse_failure("(")
+          r4 = nil
+        end
+        s1 << r4
+      end
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(LeftParen0)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      r5 = super
+      if r5
+        r0 = r5
+      else
+        @index = i0
+        r0 = nil
+      end
+    end
+
+    node_cache[:left_paren][start_index] = r0
+
+    r0
+  end
+
+  module Year0
+    def a
+      elements[0]
+    end
+
+    def space
+      elements[1]
+    end
+
+    def b
+      elements[2]
+    end
+  end
+
+  module Year1
+    def value
+      a.value + " " + b.value
+    end
+    
+    def pos
+      a.pos.merge(b.pos)
+    end
+    
+    def details
+      {:year => a.value, :approximate_year => b.value}
+    end
+  end
+
+  module Year2
+    def a
+      elements[0]
+    end
+
+    def space
+      elements[1]
+    end
+
+    def page_number
+      elements[2]
+    end
+  end
+
+  module Year3
+    def value
+      a.text_value
+    end
+    
+    def pos
+      {a.interval.begin => ['year', a.interval.end]}
+    end
+    
+    def details
+      {:year => value}
+    end
+  end
+
+  def _nt_year
+    start_index = index
+    if node_cache[:year].has_key?(index)
+      cached = node_cache[:year][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    r2 = _nt_year_number
+    s1 << r2
+    if r2
+      r3 = _nt_space
+      s1 << r3
+      if r3
+        r4 = _nt_approximate_year
+        s1 << r4
+      end
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(Year0)
+      r1.extend(Year1)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      i5, s5 = index, []
+      r6 = _nt_year_number
+      s5 << r6
+      if r6
+        r7 = _nt_space
+        s5 << r7
+        if r7
+          r8 = _nt_page_number
+          s5 << r8
+        end
+      end
+      if s5.last
+        r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
+        r5.extend(Year2)
+        r5.extend(Year3)
+      else
+        @index = i5
+        r5 = nil
+      end
+      if r5
+        r0 = r5
+      else
+        r9 = _nt_year_number_with_punctuation
+        if r9
+          r0 = r9
+        else
+          r10 = _nt_approximate_year
+          if r10
+            r0 = r10
+          else
+            r11 = _nt_double_year
+            if r11
+              r0 = r11
+            else
+              r12 = super
+              if r12
+                r0 = r12
+              else
+                @index = i0
+                r0 = nil
+              end
+            end
+          end
+        end
+      end
+    end
+
+    node_cache[:year][start_index] = r0
+
+    r0
+  end
+
+  module ApproximateYear0
+    def space
+      elements[1]
+    end
+
+    def a
+      elements[2]
+    end
+
+    def space
+      elements[3]
+    end
+
+  end
+
+  module ApproximateYear1
+    def value
+     "(" + a.text_value + ")"
+    end
+    
+    def pos
+      {a.interval.begin => ['year', a.interval.end]}
+    end
+    
+    def details
+      {:approximate_year => value}
+    end
+  end
+
+  def _nt_approximate_year
+    start_index = index
+    if node_cache[:approximate_year].has_key?(index)
+      cached = node_cache[:approximate_year][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0, s0 = index, []
+    if has_terminal?("[", false, index)
+      r1 = instantiate_node(SyntaxNode,input, index...(index + 1))
+      @index += 1
+    else
+      terminal_parse_failure("[")
+      r1 = nil
+    end
+    s0 << r1
+    if r1
+      r2 = _nt_space
+      s0 << r2
+      if r2
+        r3 = _nt_year_number
+        s0 << r3
+        if r3
+          r4 = _nt_space
+          s0 << r4
+          if r4
+            s5, i5 = [], index
+            loop do
+              if has_terminal?("]", false, index)
+                r6 = instantiate_node(SyntaxNode,input, index...(index + 1))
+                @index += 1
+              else
+                terminal_parse_failure("]")
+                r6 = nil
+              end
+              if r6
+                s5 << r6
+              else
+                break
+              end
+            end
+            if s5.empty?
+              @index = i5
+              r5 = nil
+            else
+              r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
+            end
+            s0 << r5
+          end
+        end
+      end
+    end
+    if s0.last
+      r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
+      r0.extend(ApproximateYear0)
+      r0.extend(ApproximateYear1)
+    else
+      @index = i0
+      r0 = nil
+    end
+
+    node_cache[:approximate_year][start_index] = r0
+
+    r0
+  end
+
+  module DoubleYear0
+    def year_number
+      elements[0]
+    end
+
+  end
+
+  module DoubleYear1
+    def value
+      text_value
+    end
+    
+    def pos
+      {interval.begin => ['year', interval.end]}
+    end
+    
+    def details
+      {:year => value}
+    end
+  end
+
+  def _nt_double_year
+    start_index = index
+    if node_cache[:double_year].has_key?(index)
+      cached = node_cache[:double_year][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0, s0 = index, []
+    r1 = _nt_year_number
+    s0 << r1
+    if r1
+      if has_terminal?("-", false, index)
+        r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
+        @index += 1
+      else
+        terminal_parse_failure("-")
+        r2 = nil
+      end
+      s0 << r2
+      if r2
+        s3, i3 = [], index
+        loop do
+          if has_terminal?('\G[0-9]', true, index)
+            r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
+            @index += 1
+          else
+            r4 = nil
+          end
+          if r4
+            s3 << r4
+          else
+            break
+          end
+        end
+        if s3.empty?
+          @index = i3
+          r3 = nil
+        else
+          r3 = instantiate_node(SyntaxNode,input, i3...index, s3)
+        end
+        s0 << r3
+        if r3
+          if has_terminal?('\G[A-Za-z]', true, index)
+            r6 = instantiate_node(SyntaxNode,input, index...(index + 1))
+            @index += 1
+          else
+            r6 = nil
+          end
+          if r6
+            r5 = r6
+          else
+            r5 = instantiate_node(SyntaxNode,input, index...index)
+          end
+          s0 << r5
+          if r5
+            if has_terminal?('\G[\\?]', true, index)
+              r8 = instantiate_node(SyntaxNode,input, index...(index + 1))
+              @index += 1
+            else
+              r8 = nil
+            end
+            if r8
+              r7 = r8
+            else
+              r7 = instantiate_node(SyntaxNode,input, index...index)
+            end
+            s0 << r7
+          end
+        end
+      end
+    end
+    if s0.last
+      r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
+      r0.extend(DoubleYear0)
+      r0.extend(DoubleYear1)
+    else
+      @index = i0
+      r0 = nil
+    end
+
+    node_cache[:double_year][start_index] = r0
+
+    r0
+  end
+
+  module YearNumberWithPunctuation0
+    def a
+      elements[0]
+    end
+
+  end
+
+  module YearNumberWithPunctuation1
+    def value
+      a.text_value
+    end
+
+    def pos
+      {interval.begin => ['year', interval.end]}
+    end
+
+    def details
+      {:year => value}
+    end
+  end
+
+  def _nt_year_number_with_punctuation
+    start_index = index
+    if node_cache[:year_number_with_punctuation].has_key?(index)
+      cached = node_cache[:year_number_with_punctuation][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0, s0 = index, []
+    r1 = _nt_year_number
+    s0 << r1
+    if r1
+      if has_terminal?(".", false, index)
+        r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
+        @index += 1
+      else
+        terminal_parse_failure(".")
+        r2 = nil
+      end
+      s0 << r2
+    end
+    if s0.last
+      r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
+      r0.extend(YearNumberWithPunctuation0)
+      r0.extend(YearNumberWithPunctuation1)
+    else
+      @index = i0
+      r0 = nil
+    end
+
+    node_cache[:year_number_with_punctuation][start_index] = r0
+
+    r0
+  end
+
+  module PageNumber0
+    def space
+      elements[1]
+    end
+
+  end
+
+  module PageNumber1
+    def value
+    end
+  end
+
+  def _nt_page_number
+    start_index = index
+    if node_cache[:page_number].has_key?(index)
+      cached = node_cache[:page_number][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0, s0 = index, []
+    if has_terminal?(":", false, index)
+      r1 = instantiate_node(SyntaxNode,input, index...(index + 1))
+      @index += 1
+    else
+      terminal_parse_failure(":")
+      r1 = nil
+    end
+    s0 << r1
+    if r1
+      r2 = _nt_space
+      s0 << r2
+      if r2
+        s3, i3 = [], index
+        loop do
+          if has_terminal?('\G[\\d]', true, index)
+            r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
+            @index += 1
+          else
+            r4 = nil
+          end
+          if r4
+            s3 << r4
+          else
+            break
+          end
+        end
+        if s3.empty?
+          @index = i3
+          r3 = nil
+        else
+          r3 = instantiate_node(SyntaxNode,input, i3...index, s3)
+        end
+        s0 << r3
+      end
+    end
+    if s0.last
+      r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
+      r0.extend(PageNumber0)
+      r0.extend(PageNumber1)
+    else
+      @index = i0
+      r0 = nil
+    end
+
+    node_cache[:page_number][start_index] = r0
+
+    r0
+  end
+
+  def _nt_epitheton_authorship_inconsistencies
+    start_index = index
+    if node_cache[:epitheton_authorship_inconsistencies].has_key?(index)
+      cached = node_cache[:epitheton_authorship_inconsistencies][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    if has_terminal?("corrig.", false, index)
+      r0 = instantiate_node(SyntaxNode,input, index...(index + 7))
+      @index += 7
+    else
+      terminal_parse_failure("corrig.")
+      r0 = nil
+    end
+
+    node_cache[:epitheton_authorship_inconsistencies][start_index] = r0
+
+    r0
+  end
+
+  module Garbage0
+    def space
+      elements[0]
+    end
+
+    def space
+      elements[2]
+    end
+
+  end
+
+  module Garbage1
+    def space_hard
+      elements[0]
+    end
+
+  end
+
+  def _nt_garbage
+    start_index = index
+    if node_cache[:garbage].has_key?(index)
+      cached = node_cache[:garbage][index]
+      @index = cached.interval.end if cached
+      return cached
+    end
+
+    i0 = index
+    i1, s1 = index, []
+    r2 = _nt_space
+    s1 << r2
+    if r2
+      if has_terminal?('\G["\',.]', true, index)
+        r3 = instantiate_node(SyntaxNode,input, index...(index + 1))
+        @index += 1
+      else
+        r3 = nil
+      end
+      s1 << r3
+      if r3
+        r4 = _nt_space
+        s1 << r4
+        if r4
+          s5, i5 = [], index
+          loop do
+            if has_terminal?('\G[^щ]', true, index)
+              r6 = instantiate_node(SyntaxNode,input, index...(index + 1))
+              @index += 1
+            else
+              r6 = nil
+            end
+            if r6
+              s5 << r6
+            else
+              break
+            end
+          end
+          r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
+          s1 << r5
+        end
+      end
+    end
+    if s1.last
+      r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
+      r1.extend(Garbage0)
+    else
+      @index = i1
+      r1 = nil
+    end
+    if r1
+      r0 = r1
+    else
+      i7, s7 = index, []
+      r8 = _nt_space_hard
+      s7 << r8
+      if r8
+        s9, i9 = [], index
+        loop do
+          if has_terminal?('\G[^ш]', true, index)
+            r10 = instantiate_node(SyntaxNode,input, index...(index + 1))
+            @index += 1
+          else
+            r10 = nil
+          end
+          if r10
+            s9 << r10
+          else
+            break
+          end
+        end
+        if s9.empty?
+          @index = i9
+          r9 = nil
+        else
+          r9 = instantiate_node(SyntaxNode,input, i9...index, s9)
+        end
+        s7 << r9
+      end
+      if s7.last
+        r7 = instantiate_node(SyntaxNode,input, i7...index, s7)
+        r7.extend(Garbage1)
+      else
+        @index = i7
+        r7 = nil
+      end
+      if r7
+        r0 = r7
+      else
+        @index = i0
+        r0 = nil
+      end
+    end
+
+    node_cache[:garbage][start_index] = r0
+
+    r0
+  end
+
+end
+
+class ScientificNameDirtyParser < Treetop::Runtime::CompiledParser
+  include ScientificNameDirty
+end