bio-table 0.0.6 → 0.8.0
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- data/README.md +100 -26
- data/VERSION +1 -1
- data/bin/bio-table +23 -3
- data/features/cli.feature +20 -2
- data/features/filters.feature +43 -0
- data/features/step_definitions/filters.rb +46 -0
- data/features/support/env.rb +3 -0
- data/lib/bio-table.rb +4 -0
- data/lib/bio-table/filter.rb +84 -18
- data/lib/bio-table/rdf.rb +8 -4
- data/lib/bio-table/statistics.rb +45 -0
- data/lib/bio-table/table.rb +6 -5
- data/lib/bio-table/table_apply.rb +13 -5
- data/lib/bio-table/tableload.rb +3 -2
- data/lib/bio-table/validator.rb +1 -1
- data/test/data/regression/table1-filter-0_1.ref +1 -0
- data/test/data/regression/table1-filter-named-0_1.ref +13 -0
- data/test/data/regression/table1-named-0_05.ref +281 -0
- data/test/data/regression/table_counter_filter.ref +197 -0
- metadata +29 -22
@@ -0,0 +1,197 @@
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1
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#Gene AJ B6 Axb1 Axb2 Axb4 Axb12 AXB13 Axb15 Axb19 Axb23 Axb24 Bxa1 Bxa2 Bxa4 Bxa7 Bxa8 Bxa12 Bxa11 Bxa13 Bxa15 Bxa16 Axb5 Axb6 Axb8 Axb1 Bxa24 Bxa25 Bxa26 gene_symbol gene_desc
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2
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105855 236.88 213.95 213.15 253.49 198 231.56 200.96 255.2 214.04 231.46 NA NA 233.23 241.26 237.53 171.87 237.13 162.3 252.13 284.85 188.76 253.43 220.15 305.52 NA 217.42 NA NA Nckap1l NCK associated protein 1 like,NCK associated protein 1 like,
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3
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105988 10.04 4.09 3.6 2.36 4.03 6.46 2.26 6.26 3.35 3.97 NA NA 7.91 6.25 5.11 5.51 4.87 3.38 2.31 3.94 8.27 3.64 8.49 4.33 NA 3.07 NA NA Espl1 extra spindle poles-like 1,extra spindle poles-like 1,
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4
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106021 16.25 17.89 14.53 14.31 11.24 18.06 8.76 17.98 15.71 17.12 NA NA 17.62 16.37 16.27 14.73 18.63 10.76 17.63 16.64 18.54 19.15 20.07 21.54 NA 11.42 NA NA Topors topoisomerase 1-binding RING finger
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5
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106025 17.34 32.29 34.65 32.94 29.62 25.76 26.04 22.93 28.84 24.83 NA NA 23.56 29.42 25.75 32.36 28.46 33.97 24.72 26.95 27.29 26.28 24.56 26.48 NA 31.46 NA NA Sharpin SHANK-associated RH domain interacting protein
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6
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106039 44.57 40.92 33.58 37 43.32 43.41 34.74 44.54 50.29 48 NA NA 42.12 43.53 38.36 42.62 44.6 38.25 46.03 41.58 39.23 46.83 35.57 45.47 NA 37.77 NA NA Gga1 golgi associated, gamma adaptin ear containing,
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7
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106064 6.34 7.26 4.21 8.28 5.07 6.71 6.5 6.94 11.28 11.96 NA NA 6.98 8.72 6.39 8.14 8.56 4.58 9.06 8.46 7.23 9.58 7.89 7.25 NA 5.41 NA NA AW549877 hypothetical protein LOC106064,hypothetical protein LOC106064,
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8
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106068 9.65 6.98 5.38 4.19 4.04 10.21 3.67 6.8 5.08 5.68 NA NA 7.19 7.91 8.05 4.08 8.86 2.48 4.78 6.67 7.69 5.6 7.86 7.25 NA 3.69 NA NA Slc45a4 solute carrier family 45, member 4,solute carrier family 45, member 4,solute carrier family 45, member 4,
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9
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106073 79.34 71.02 75.82 88.43 75.67 60.73 86.58 73.15 73.54 72.4 NA NA 64.14 61.04 72.67 54.4 70.42 73.83 81.7 62.48 64.28 72.42 53.01 62.02 NA 86.98 NA NA D15Mgi27 hypothetical protein LOC106073
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10
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106143 30.3 31.47 26.64 31.96 18.2 29.9 27.82 29.14 24.1 30.87 NA NA 31.93 29.46 29.56 27.31 32.35 26.58 28.98 33.39 27.24 28.87 36.24 26.21 NA 30.48 NA NA Cggbp1 CGG triplet repeat binding protein 1,CGG triplet repeat binding protein 1,
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11
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106200 4.35 8.51 3.98 9.56 8.6 9.47 10.17 9.58 9.08 11.48 NA NA 11.04 10.13 12.77 10.9 12.69 10.54 10.65 11.18 12.17 9.83 10.02 9.87 NA 10 NA NA Txndc11 thioredoxin domain containing 11 isoform 1,thioredoxin domain containing 11 isoform 1,
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12
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106298 26.04 23.15 25.35 26.91 20.5 23.4 22.14 24.66 21.79 26.12 NA NA 24.73 24.21 25.12 21.61 24.83 22.53 21.65 21.56 21.11 22 22.93 22.15 NA 29.06 NA NA Rrn3 RRN3 RNA polymerase I transcription factor
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13
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106326 14.8 17.73 11.3 14.36 9.13 19.6 9.76 14.67 17.76 16.75 NA NA 19.19 18.63 13.05 14.28 17.66 9.62 19.23 17.31 16.68 17.4 22.4 15.1 NA 11.55 NA NA Osbpl11 oxysterol binding protein-like 11
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14
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106344 20.03 23.33 18.46 16.5 25.71 16.02 21.6 16.24 16.13 15.1 NA NA 25.21 22.7 25.86 29.33 16.4 34.99 13.27 15.76 27.82 16.92 29.33 13.43 NA 26.06 NA NA Rfc4 replication factor C (activator 1) 4
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15
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106489 3.87 8.98 11.27 10.6 11.92 7.65 13.05 5.24 8.61 5.25 NA NA 5.25 5.88 5.85 9.59 7.21 10.73 6.74 5.43 7.12 8.72 5.7 5.33 NA 9.98 NA NA n/a n/a
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16
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106504 41.59 36.19 33.11 32.53 30.96 41.17 34.07 40.67 41.33 35.15 NA NA 44.05 40.12 34.69 32.85 41.58 34.69 42.24 43.74 42.7 35.65 39.32 40.4 NA 33.61 NA NA Stk38 serine/threonine kinase 38,serine/threonine kinase 38,
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17
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106512 89.47 83.36 94.54 73.22 100.37 82.24 90.51 90.04 79.98 67.65 NA NA 83.74 75.9 86.58 98.49 83.21 92.08 101.37 90.16 81.74 86.87 66.89 103.71 NA 70.63 NA NA Gpsm3 G-protein signalling modulator 3 (AGS3-like, C.
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18
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106529 64.28 87.5 84.48 79.73 93.77 76.33 71.62 72.99 65.18 66.34 NA NA 91.99 81.89 85.14 98.05 87.43 104.95 77.39 77.93 93.26 87.68 99.88 68.89 NA 85.15 NA NA Gpsn2 glycoprotein, synaptic 2,glycoprotein, synaptic 2,
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19
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106564 6.8 8.23 8.28 9.86 9.72 5.61 12.34 6.45 7.01 5.28 NA NA 7.09 4.93 6.44 12.44 6.08 13.03 7.8 6.17 7.48 6.57 5.71 4.83 NA 9.46 NA NA Ppcs phosphopantothenoylcysteine synthetase
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20
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106572 6.5 13.62 8.95 10.9 7.21 10.67 6.61 8.61 8.82 9.53 NA NA 12.19 7.48 8.28 4.84 9.9 4.29 8.79 8.58 10.15 11.17 15.56 9.07 NA 10.67 NA NA Rab31 Rab31-like
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21
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106581 45.11 48.54 58.42 44.17 37.05 61.54 34.68 48.63 59.61 45.17 NA NA 51.32 46.28 46.99 43.44 59.67 46.85 61.59 60.45 54.22 56.27 53.85 50.35 NA 41.71 NA NA Itfg3 integrin alpha FG-GAP repeat containing 3,integrin alpha FG-GAP repeat containing 3,
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22
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106582 41.42 25.63 15.05 17.04 24.07 22.98 15.66 16.95 16.96 15.9 NA NA 36.82 31.51 27.45 28.97 28.93 30.14 18.24 18.47 31.34 20.84 45.31 19.74 NA 21.92 NA NA Nrm nurim
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23
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106628 19.69 23.29 19.28 20.98 23.54 18.84 21.78 19.01 21.75 22.82 NA NA 18.06 18.56 20.48 17.77 17.81 18.67 23.68 19.87 17.15 20.99 20.24 20.89 NA 20.86 NA NA Trip10 thyroid hormone receptor interactor 10,thyroid hormone receptor interactor 10,thyroid hormone receptor interactor 10,thyroid hormone receptor interactor 10,
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24
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106672 76.8 108.36 145.43 142.49 200.62 65.62 167.37 83.73 128.19 112.65 NA NA 61.9 93.82 83.57 137.29 96.06 157.47 98.15 91.39 95.75 108.95 87.99 81.8 NA 182.62 NA NA AI413582 hypothetical protein LOC106672
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25
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106707 6.26 9.03 14.04 8.49 9.83 7.95 9.77 9.12 7.65 6.08 NA NA 8.81 8.45 9.84 10.28 8.01 9.37 8.65 6.83 8.76 8.48 9.73 9.4 NA 7.72 NA NA Rpusd1 RNA pseudouridylate synthase domain containing,RNA pseudouridylate synthase domain containing,
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26
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106759 12.28 8.53 13.72 10.99 8.38 12.95 8.64 9.62 10.7 10.93 NA NA 10.95 9.63 10.86 10.21 13.14 8.29 12.97 12.36 10.38 12.11 7.34 10.86 NA 9.97 NA NA Ticam1 TICAM-1,TICAM-1,
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27
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106795 28.25 16.51 10.52 6.52 14.52 14.99 3.52 9.16 6.31 9.37 NA NA 16.39 14.85 22.57 13.28 10.87 18.32 6.23 9.8 18.78 6.27 19.1 8.53 NA 10.42 NA NA Tcf19 transcription factor 19,transcription factor 19,
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28
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106821 15.07 20.94 9.85 12.15 21.54 9.12 19.94 11.32 14.56 18.03 NA NA 19.79 18.25 10.78 21.2 15.79 18.96 15.07 13.13 20.88 10.68 12.76 14.86 NA 23.87 NA NA AI314976 hypothetical protein LOC106821,hypothetical protein LOC106821,hypothetical protein LOC106821,
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29
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106840 10.89 9.68 8.97 11.4 7.86 8.3 11.2 8.76 7.49 9.45 NA NA 8.28 7.36 8.18 5.18 9.61 7.76 9.74 7.57 9.68 9.64 9.72 7.71 NA 10.13 NA NA Unc119b unc-119 homolog B
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30
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106869 28.94 60.85 53.52 51.88 30.83 39.34 48.37 31.26 39.08 45.18 NA NA 39.57 57.14 60.3 54.41 42.59 47.74 55.54 42.52 54.17 48.28 61.27 40.72 NA 63.42 NA NA Tnfaip8 tumor necrosis factor, alpha-induced protein 8
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31
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106878 11.95 16.36 19.9 20.44 19.6 9.5 22.67 11.88 13.09 16.95 NA NA 12.67 12.77 20.24 17.57 9.37 13.81 13.87 8.89 14.16 11.56 8.13 12.05 NA 22.02 NA NA 2010002N04Rik putative small membrane protein NID67
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32
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106894 8.03 7.12 9.67 6.38 5.27 9.23 4.61 8.44 8.64 9.6 NA NA 7.36 9.6 6.66 7.87 8.21 5.6 9.54 8.98 8.37 8.9 6.78 10.07 NA 5.71 NA NA A630042L21Rik hypothetical protein LOC106894 isoform 2,hypothetical protein LOC106894 isoform 2,
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33
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106947 19.18 19.01 18.57 22.37 18.92 16.1 17.22 16.98 16.66 16.34 NA NA 18.11 15.76 18.53 17.53 19.21 16.94 20.03 15.82 15.79 19.76 17.03 17.92 NA 21.43 NA NA Slc39a3 solute carrier family 39 (zinc transporter),,solute carrier family 39 (zinc transporter),,solute carrier family 39 (zinc transporter),,
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34
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106952 16.71 15.74 10.1 7.31 11.9 14.25 7.24 19.18 11.75 10.82 NA NA 20.26 16.17 18.98 9.52 14.03 8.91 14.96 16.66 18.5 14.61 14.59 16.24 NA 8.49 NA NA Centd3 centaurin, delta 3,centaurin, delta 3,centaurin, delta 3,centaurin, delta 3,
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35
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106957 39.27 41.28 49.16 54.75 29.67 41.57 43.08 46.61 35.99 48.06 NA NA 38.76 40.92 40.04 31.02 44.58 29.27 42.45 38.93 33.17 45.1 42.97 42.8 NA 42.34 NA NA Slc39a6 solute carrier family 39 (metal ion
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36
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107029 38.85 36.9 26.62 37.39 39.71 26.15 36.25 35.15 30.39 25.39 NA NA 49.12 39.94 36.15 30.88 36.52 43.8 31.46 36.2 33.31 26.91 50.4 25.3 NA 40.34 NA NA Me2 malic enzyme 2, NAD(+)-dependent, mitochondrial
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37
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107035 14.94 15.02 12.37 13.82 8.42 17.93 10.66 16.82 18.83 16.22 NA NA 16.51 16.33 15.77 12.91 17.98 9.81 17.14 18.71 15.09 19.85 15.03 18.12 NA 11.89 NA NA Fbxo38 MoKA,MoKA,
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38
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107045 36.05 26.63 30.41 24.46 23.89 29.09 19.62 31.35 21.56 26.83 NA NA 36.38 30.45 36.9 21.33 30.71 27.45 27.09 32.28 27.44 30.21 28.48 33.07 NA 24.78 NA NA Lars leucyl-tRNA synthetase
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39
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107047 14.49 23.24 31.95 21.75 33.51 12.76 17.19 17.49 14.19 13.71 NA NA 17.11 15.44 18.71 23.77 15.91 28.38 14.75 12.8 19.61 21.75 19.99 14.54 NA 26.34 NA NA Tnfsf5ip1 Clast3 protein
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40
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107071 26.85 44.77 56.42 48.85 64 31.86 54.87 36.22 37.58 39.35 NA NA 31.75 37.06 43.5 50.18 30.33 50.69 39.78 32.39 33.7 38.26 32.47 38.05 NA 64.2 NA NA Wdr74 WD repeat domain 74
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41
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107094 13.24 12.73 14.12 11.65 9.71 12.9 11.36 11.91 10.28 15.93 NA NA 11.34 12.68 12.97 8.31 11.63 7.16 9.93 9.87 9.57 11 9.55 12.51 NA 10.78 NA NA Rrp12 ribosomal RNA processing 12 homolog
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42
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107173 10.97 15.44 15.06 17.16 19.72 10.14 19.85 7.87 15.34 12.65 NA NA 12.38 12.85 13.62 15.91 11.69 20.1 14.34 9.53 12.93 15.32 13.15 11 NA 18.82 NA NA Gpr137 expressed sequence AI428855
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43
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107182 7.67 8.66 6.29 6.9 5.17 9.7 4.09 9.39 8.2 11.08 NA NA 9.23 9.39 5.97 5.97 9.78 4.96 8.56 9.24 7.93 7.9 8.7 7.97 NA 5.23 NA NA Btaf1 BTAF1 RNA polymerase II, B-TFIID transcription
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44
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107242 19.02 23.29 12.59 23.09 22.69 20.26 20.51 10.36 19.2 11.54 NA NA 20.21 12.1 12.46 12.46 11.88 12.47 13.81 11.25 15.5 16.08 14.48 19.05 NA 16.77 NA NA AI837181 basophilic leukemia expressed protein
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45
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107260 70.72 74.34 83.79 88.56 99.39 64.52 97.57 63.84 72.06 63.1 NA NA 64.04 70.53 67.82 86.95 67.46 94.82 74.31 60.71 64.73 78.84 62.87 68.51 NA 93.68 NA NA Otub1 otubain 1
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46
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107271 36.54 32.87 28.27 29.47 26.35 30.2 22.77 33.22 23.8 24.63 NA NA 42.52 35.94 39.57 28.18 29.08 34.2 27.7 25.8 33.16 27.29 31.16 31 NA 34.6 NA NA Yars tyrosyl-tRNA synthetase
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47
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107272 51.98 36.97 23.83 36.85 30.11 32.32 29.39 33.2 17.88 23.38 NA NA 51.23 51.35 50.47 38.88 31.3 57.75 20.95 29.46 54.92 25.24 65.64 23.24 NA 49.34 NA NA Psat1 phosphoserine aminotransferase 1,phosphoserine aminotransferase 1,phosphoserine aminotransferase 1,
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48
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107305 15.57 20.74 18.77 19.51 18.56 20.96 18.67 20.06 18.32 19.41 NA NA 21.41 21.86 24.38 17.8 19.58 16.29 23.55 19.77 17.66 19.13 15.37 22.09 NA 17.39 NA NA Vps37c vacuolar protein sorting 37C,vacuolar protein sorting 37C,
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49
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107321 232.51 289.34 284.53 332.03 281.9 225.35 357.17 278.82 268.17 205.42 NA NA 259.8 261.06 266.56 343.26 264.4 298.62 273.6 258.54 219.75 301.23 250.61 217.75 NA 340.72 NA NA Lpxn leupaxin
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50
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107338 10.01 9 9.03 6.97 7.51 11.71 6.45 11.18 9.98 11.41 NA NA 12.17 10.67 9.19 7.04 11.15 5.52 10.09 11.96 11.44 9.44 10.09 11.28 NA 5.7 NA NA Gbf1 golgi-specific brefeldin A-resistance factor 1,golgi-specific brefeldin A-resistance factor 1,golgi-specific brefeldin A-resistance factor 1,golgi-specific brefeldin A-resistance factor 1,
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51
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107358 59.93 61.44 51.96 55.84 38.41 44.12 41.75 54.93 41.28 49.58 NA NA 59.54 45.9 54.89 41.99 52.97 45.49 52.4 51.82 53.4 56.25 68.12 47.51 NA 55.83 NA NA Tm9sf3 transmembrane protein 9 superfamily member 3
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52
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107368 8.56 7.45 6.24 6.15 5.78 8.16 4.29 9.08 7.3 7.69 NA NA 10.67 6.95 7.02 5.21 9.53 5.69 6.61 9.32 7.94 7.37 8.31 8.41 NA 5.24 NA NA Pdzd8 PDZ domain containing 8
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53
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107371 14.63 15 11.89 11.09 10.27 14.02 9.76 13.66 12.74 13.51 NA NA 14.06 13.33 16.44 11.27 12.64 10.11 13.7 13.43 14.84 13.45 13.62 14.65 NA 10.53 NA NA Exoc6 exocyst complex component 6,exocyst complex component 6,
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54
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107373 82.99 64.13 54.07 48.27 53.85 68.24 33.73 64.81 51.53 62.79 NA NA 84.95 68.61 69.49 62.5 66.98 54.21 63.64 72.53 79.24 62.79 99.12 63.4 NA 43.54 NA NA 4632417K18Rik hypothetical protein LOC107373
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55
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107375 12.9 25.14 25.34 21.88 23.36 17.9 22.98 18.21 23.08 20.45 NA NA 19.59 22.52 25.36 22.6 18.73 19.37 20.52 22.56 22.81 18.03 18.76 20.65 NA 26.35 NA NA Slc25a45 solute carrier family 25, member 45,solute carrier family 25, member 45,
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56
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+
107392 62.54 78.07 89.53 76.14 124.55 55.7 114.64 58.3 69.49 57.96 NA NA 65.57 69.66 59.99 123.3 48.54 102.73 66.65 57.2 73.75 65.69 59.59 74.82 NA 90.45 NA NA Brms1 breast cancer metastasis-suppressor 1
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57
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107435 53.6 52.17 43.63 37.38 39.57 43.31 29.96 35.59 28.56 34.7 NA NA 50.17 48.26 59.46 53.6 39.63 60.31 32.89 34.48 49.35 35.17 68.79 30.3 NA 53.05 NA NA Hat1 histone aminotransferase 1,histone aminotransferase 1,
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58
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107503 37.71 45.46 43.04 46.48 23.2 40.85 37.31 43.18 49.38 45.37 NA NA 45.65 34 55.47 32.3 30.39 37.91 60.44 25.55 39.29 28.1 26.27 41.95 NA 48.12 NA NA Atf5 ativating transcription factor 5,ativating transcription factor 5,
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59
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+
107508 46.77 29.21 30.4 18.72 26.17 43.31 18.98 44.64 30.16 37.47 NA NA 45.01 39.74 35.46 39.33 36 26.41 36.78 39.82 41.99 37.1 39.32 46.24 NA 16.84 NA NA Eprs glutamyl-prolyl-tRNA synthetase,glutamyl-prolyl-tRNA synthetase,glutamyl-prolyl-tRNA synthetase,
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60
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107513 33.65 32.06 28 35.27 26.01 27.6 32.04 29.15 21.33 28.22 NA NA 33.3 29.33 34.61 27.68 28.44 33.17 26.77 25.38 32.61 28.72 34.97 24.92 NA 37.94 NA NA Ssr1 signal sequence receptor, alpha,signal sequence receptor, alpha,
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61
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+
107566 41.4 34.72 44 39.66 22.79 34.44 22.5 34.96 29.24 34.04 NA NA 39.33 32.59 32.65 28.21 37.13 28.41 25.58 26.94 43.45 27.63 36.18 29.72 NA 43.8 NA NA Arl2bp ADP-ribosylation factor-like 2 binding protein
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62
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+
107568 19.96 36.9 17.17 28.82 13.06 36.21 13.4 19.18 30.22 22.48 NA NA 40.61 28.44 18.47 21.92 36.82 14.18 36.45 34.24 27.13 42.53 50.47 30.55 NA 16.21 NA NA Wwp1 WW domain-containing protein 1
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63
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+
107569 23.69 23.18 28.34 28.22 31.59 28.75 47.58 32.36 26.99 21.51 NA NA 20.88 28.47 28.1 34 22.43 34.21 18.68 25.78 21.01 20.66 21.96 28.46 NA 39.6 NA NA Nt5c3 5'-nucleotidase, cytosolic III,5'-nucleotidase, cytosolic III,
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64
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107650 13.06 13.8 13.78 13.06 9.31 14.31 13.07 14.49 13.96 13.74 NA NA 14.13 14.81 13.83 10.27 15.45 10.04 12.44 14.79 12.76 14 13.05 13.89 NA 13.54 NA NA Pi4kb phosphatidylinositol 4-kinase, catalytic, beta,phosphatidylinositol 4-kinase, catalytic, beta,phosphatidylinositol 4-kinase, catalytic, beta,
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65
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107652 17.52 15.73 16.63 10.53 14.48 16.46 10.18 11.44 15.39 15.38 NA NA 17.57 12.4 16.83 11.79 13.88 13.06 14.51 15.01 20.9 13.19 17.32 16.07 NA 11.19 NA NA Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1,UDP-N-acetylglucosamine pyrophosphorylase 1,UDP-N-acetylglucosamine pyrophosphorylase 1,UDP-N-acetylglucosamine pyrophosphorylase 1,
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66
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+
107684 27.95 55.26 41.03 43.92 50.42 74.39 37.1 26.47 55.25 54.4 NA NA 77.14 56.1 60.43 17.72 24.89 16.53 56.58 72.66 58.73 19.18 22.77 77.76 NA 38 NA NA Coro2a coronin, actin binding protein 2A,coronin, actin binding protein 2A,coronin, actin binding protein 2A,
|
67
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+
107686 48.89 71.74 97.33 92.77 158.47 57.48 103.34 55.04 65.8 57.03 NA NA 64.72 77.63 72.58 120.35 53.39 140.21 60.03 54.13 92.64 68.83 71.46 61.42 NA 121.23 NA NA Snrpd2 small nuclear ribonucleoprotein D2
|
68
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+
107701 16.73 18 20.46 18 14.91 16.13 18.87 20.77 18.21 18.24 NA NA 17.99 18.71 19.3 17.69 18.99 18.02 20.9 19.82 18.21 21.44 18.89 20.17 NA 16.51 NA NA Sf3b4 splicing factor 3b, subunit 4
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69
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+
107702 851.76 1309.25 1796.85 1847.55 2280.84 872.11 3092.64 1295.64 1461.21 1235.63 NA NA 923.1 1174.67 1108.1 1627.55 963.7 2095.88 1137.19 1022.39 1104.8 1260.3 886.81 1091.46 NA 2273.54 NA NA Rnh1 ribonuclease/angiogenin inhibitor 1,ribonuclease/angiogenin inhibitor 1,ribonuclease/angiogenin inhibitor 1,
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70
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+
107723 23.52 19.73 18.13 16.35 10.63 25.3 12.52 18.81 17.91 21.69 NA NA 25.9 20.24 22.86 14.22 24.84 12.61 20.8 21.23 21.99 19.56 23.17 19.78 NA 12.39 NA NA Slc12a6 solute carrier family 12, member 6 isoform 2,solute carrier family 12, member 6 isoform 2,solute carrier family 12, member 6 isoform 2,solute carrier family 12, member 6 isoform 2,
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71
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+
107732 45.11 29.72 41.52 36.36 36.17 34.91 64.29 27.36 27.15 27.26 NA NA 26.11 43.23 48.36 32.75 26.63 49.05 40.56 40.86 39.41 28.96 30.01 24.77 NA 43.25 NA NA Mrpl10 mitochondrial ribosomal protein L10
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72
|
+
107733 5 9.35 13.7 8.95 14.47 5.99 11.39 4.64 8.58 7.46 NA NA 6.95 7.49 7.01 15.83 4.94 16.7 6.01 6.24 8.44 5.96 7.09 5.22 NA 15.56 NA NA Mrpl41 mitochondrial ribosomal protein L41
|
73
|
+
107734 74.61 102.03 103.57 109.47 145.06 80.82 143.67 82.27 83.75 75.46 NA NA 82.04 99 105.71 153.48 75.07 154.91 86 77.26 107.29 100.13 96.43 87.81 NA 152.4 NA NA Mrpl30 mitochondrial ribosomal protein L30
|
74
|
+
107746 38.1 26.38 28.84 24.3 23.3 32.95 16.88 34.5 31.85 38.26 NA NA 32.48 32.75 25.55 23.34 33.52 20.12 31.62 32.35 31.34 29.88 31.33 35.78 NA 17.49 NA NA Rapgef1 Rap guanine nucleotide exchange factor (GEF) 1
|
75
|
+
107747 4.12 7.84 3.39 5.97 3 10.06 6.12 5.32 4.22 3.02 NA NA 7.98 8.49 2.79 5.66 8.16 4.19 9.15 7.89 6.08 7.26 11.71 6.1 NA 3.27 NA NA Aldh1l1 aldehyde dehydrogenase 1 family, member L1,aldehyde dehydrogenase 1 family, member L1,
|
76
|
+
107766 7.19 5.4 5.93 5.69 3.03 3.36 3.57 7.96 2.24 0.71 NA NA 9.23 3.17 10.76 8.16 1.29 5.46 5.13 2.74 4.66 3.2 4.49 1.15 NA 3.6 NA NA Haao 3-hydroxyanthranilate 3,4-dioxygenase,3-hydroxyanthranilate 3,4-dioxygenase,
|
77
|
+
107767 8.46 12.72 8.97 10.61 6.76 9.78 7.75 12.17 12.9 13.5 NA NA 8.97 12.28 11.64 9.54 15.28 11.35 11.54 15.71 10.96 14.35 17.37 9.08 NA 13.22 NA NA Scamp1 secretory carrier membrane protein 1,secretory carrier membrane protein 1,secretory carrier membrane protein 1,
|
78
|
+
107769 68.27 73.29 64.75 56.09 56.8 62.83 38.94 39.58 47.54 47.93 NA NA 77.88 63.2 94.55 50.67 57.39 52.09 51.02 51.84 74.89 47.55 82.24 43.16 NA 63.41 NA NA Tm6sf1 transmembrane 6 superfamily member 1,transmembrane 6 superfamily member 1,transmembrane 6 superfamily member 1,
|
79
|
+
107771 15.59 20.2 22.49 19.06 20.11 17.16 15.53 12.45 15.09 14.33 NA NA 23.27 20.33 13.57 21.88 21.56 21.87 20.63 14.6 19.15 19.28 19.44 12.57 NA 19.17 NA NA Bmyc brain expressed myelocytomatosis oncogene
|
80
|
+
107817 12.05 20.4 20.12 16.67 24.68 14.12 22.24 15.64 15.13 18.03 NA NA 14.12 17.73 15.64 19.71 16.58 17.6 16.09 13.24 18.14 13.01 16.72 19.82 NA 23.33 NA NA Jmjd6 jumonji domain containing 6
|
81
|
+
107823 35.4 28.25 19.38 15.23 21.49 32.73 11.49 38.13 22.34 29.56 NA NA 34.63 29.41 33.86 29.59 38.05 17.14 24.35 30.17 39.18 24 43.69 39.35 NA 17.59 NA NA Whsc1 Wolf-Hirschhorn syndrome candidate 1,Wolf-Hirschhorn syndrome candidate 1,Wolf-Hirschhorn syndrome candidate 1,
|
82
|
+
107829 28.83 34.35 36.57 32.68 34.41 30.28 33.32 36.88 33.24 36.42 NA NA 33.71 30.97 35.65 33.09 30.61 29.66 37.71 29.05 29.84 33.21 29.11 37.25 NA 37.02 NA NA Thoc5 THO complex 5
|
83
|
+
107885 3.5 8.13 5.3 8.2 6.83 5.43 12.75 6.85 7.54 7.48 NA NA 3.74 5.94 5.95 12.07 6.16 12.87 5.15 6.79 11.14 5.95 6.49 3.19 NA 13.19 NA NA Mthfs 5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,
|
84
|
+
107895 6.92 8.68 5.26 5.69 2.24 12.1 1.95 7.95 4.87 9.29 NA NA 8.42 7.88 6.13 1.29 8.15 0.64 6.38 6.91 6.96 8.01 10.45 6.41 NA 3.38 NA NA Mgat5 mannoside acetylglucosaminyltransferase 5,mannoside acetylglucosaminyltransferase 5,mannoside acetylglucosaminyltransferase 5,mannoside acetylglucosaminyltransferase 5,
|
85
|
+
107932 68.86 39.62 37.57 25.63 36.4 67.73 19.13 55.81 53.49 55.17 NA NA 54.93 53.21 35.38 37.38 54.74 25.07 50.07 60.51 55.64 42.67 54.61 67.82 NA 19.65 NA NA Chd4 chromodomain helicase DNA binding protein 4,chromodomain helicase DNA binding protein 4,
|
86
|
+
107939 12.56 8.44 9.9 7.71 6.16 10.2 5.48 9.56 8.96 11.05 NA NA 9.64 9.57 9.29 7.23 10.15 8.34 9.62 9.09 10.67 9.01 9.56 10.32 NA 6.27 NA NA Pom121 nuclear pore membrane protein 121
|
87
|
+
107951 22.44 24.43 23.47 27.36 26.21 24.11 22.54 24.2 26.52 23.09 NA NA 22.85 24.42 23.97 22.24 23.78 23.03 26.96 23.22 23.97 26.24 23.2 25.18 NA 24.5 NA NA Cdk9 cyclin-dependent kinase 9,cyclin-dependent kinase 9,
|
88
|
+
107975 10.53 8.93 7 6.46 8.34 10.76 5.28 9.15 10.59 9.73 NA NA 10.49 8.86 10.72 7.94 11.52 6.18 10.35 9.46 12.59 9.2 9.7 9.96 NA 6.8 NA NA Pacs1 phosphofurin acidic cluster sorting protein 1,phosphofurin acidic cluster sorting protein 1,phosphofurin acidic cluster sorting protein 1,
|
89
|
+
107976 46.57 49.12 46.51 53.31 37.92 37.89 44.62 51.34 49.77 44.76 NA NA 52.65 44.26 48.63 45.63 44.67 46.59 52.25 43.24 41.74 52.35 44.02 40.19 NA 47.33 NA NA Bre brain and reproductive organ-expressed protein,brain and reproductive organ-expressed protein,
|
90
|
+
107986 4.06 6.19 8.37 4.97 7.59 5.57 6.55 5.92 7.51 8.25 NA NA 5.92 8.03 8.14 6.17 7.54 7.41 8.65 10.63 7.99 7.05 7.09 8.77 NA 5.81 NA NA Ddb2 damage specific DNA binding protein 2
|
91
|
+
107995 33.87 23.45 22.11 14.24 28.14 21.59 14.24 20.9 13.97 14.63 NA NA 32.76 20.88 20.99 24.35 16.92 37.32 9.61 13.49 32.1 16.51 35.33 17.66 NA 22.46 NA NA Cdc20 cell division cycle 20 homolog,cell division cycle 20 homolog,
|
92
|
+
107999 7.8 8.77 14.04 9.06 15.47 8.14 11.72 8.85 10.12 9.77 NA NA 8.57 8.02 7.88 12.41 8.87 10 6.69 7.36 6.51 7.87 7.4 9.06 NA 7.59 NA NA Gtpbp6 GTP binding protein 6 (putative)
|
93
|
+
108012 28.23 26.23 22.22 20.51 17.96 18.81 19.03 24.82 19.52 22.54 NA NA 27.15 20.47 26.06 20.07 25.28 22.78 22.93 25.13 21.2 25.08 27.79 18.49 NA 26.87 NA NA Ap1s2 adaptor-related protein complex 1 sigma 2,adaptor-related protein complex 1 sigma 2,
|
94
|
+
108014 100.69 101.93 105.5 109.9 130.89 83.6 111.39 81.92 79.94 79.12 NA NA 91.22 91.55 91.37 87.69 81.14 108.72 89.96 79.06 92.06 96.63 85.77 87.76 NA 116.24 NA NA Sfrs9 splicing factor, arginine/serine rich 9
|
95
|
+
108037 62.38 51.55 46.35 39.14 50.64 42.91 37 45.36 30.4 32.45 NA NA 75.21 62.49 59.58 49.62 41.73 71.62 34.45 37.47 56.26 35.83 58.48 35.02 NA 51.99 NA NA Shmt2 serine hydroxymethyltransferase 2,serine hydroxymethyltransferase 2,
|
96
|
+
108058 30.93 29.46 24.42 31.01 16 22.82 20.95 28.6 27.57 27.23 NA NA 30.82 22.94 22 25.12 30.28 20.23 28.02 24.73 25.38 32.4 33.07 24.28 NA 25.72 NA NA Camk2d calcium/calmodulin-dependent protein kinase II,,calcium/calmodulin-dependent protein kinase II,,calcium/calmodulin-dependent protein kinase II,,
|
97
|
+
108062 21.36 18.99 13.15 13.71 10.64 16.3 12.83 18.5 11.7 13 NA NA 20.11 17.5 17.05 14.24 17.08 15.01 16.46 18.97 14.55 19.87 21.63 17.25 NA 13.34 NA NA Cstf2 cleavage stimulation factor, 3' pre-RNA subunit,cleavage stimulation factor, 3' pre-RNA subunit,cleavage stimulation factor, 3' pre-RNA subunit,
|
98
|
+
108067 17.7 13.08 17.22 19.94 16.88 12.39 19.06 14.03 14.54 13.35 NA NA 16.09 16.08 16.53 12.56 11.65 13.49 14.46 12.51 10.4 15.22 11.93 16.24 NA 17.63 NA NA Eif2b3 eukaryotic translation initiation factor 2B,
|
99
|
+
108077 23.95 21.63 19.2 16.16 18.45 22.35 14.59 18.34 20.98 18.22 NA NA 27.35 22.26 19.83 21.73 23.18 12.97 18.87 18.57 23.94 20.71 22.9 20.81 NA 16.63 NA NA Skiv2l superkiller viralicidic activity 2-like
|
100
|
+
108083 27.67 22.44 16.81 16.46 14.63 26.94 11.78 22.85 21.41 22.27 NA NA 26.37 22.31 20.58 19.11 25.74 13.65 23.44 22.38 24.77 21.86 23.7 25.09 NA 16.53 NA NA Pip4k2b phosphatidylinositol-5-phosphate 4-kinase, type
|
101
|
+
108086 12.1 9.79 10.76 8.95 8.9 12.62 7.72 12.47 12.26 12.94 NA NA 13.21 12.15 9.73 9.08 14.27 8.47 13.56 13.01 11.79 11.93 11.9 13.13 NA 7.86 NA NA Rnf216 ubiquitin conjugating enzyme 7 interacting,ubiquitin conjugating enzyme 7 interacting,
|
102
|
+
108098 21.69 36.57 37.87 31.78 40.09 20.27 42.34 26.21 23.29 23.41 NA NA 21.62 32.14 33.74 44.59 23.95 55.43 21.94 30.67 27.42 27.4 25.71 26.52 NA 41.27 NA NA Med21 SRB7 (supressor of RNA polymerase B) homolog
|
103
|
+
108100 27.78 24.54 26.45 24.3 34.96 25.53 22.7 34.44 34.05 21.19 NA NA 23.68 25.46 20.15 29.22 24.4 25.55 28.08 23.8 25.6 28.86 35.1 33.47 NA 20.41 NA NA Baiap2 brain-specific angiogenesis inhibitor
|
104
|
+
108101 111.73 135.65 126.88 109.88 125.27 130.48 103.01 117.32 115.46 102.84 NA NA 143.98 121.03 147.52 108.44 136.17 113 125.35 129.52 131.44 114.41 119.52 121.59 NA 120.82 NA NA BC032204 UNC-112 related protein 2,UNC-112 related protein 2,
|
105
|
+
108112 8.34 6.27 9.13 7.46 9.66 11.17 4.77 10.69 12.57 11.19 NA NA 9.19 11.8 8.96 12.45 10.32 9.31 13.03 12.59 12.31 7.84 9.15 11.07 NA 4.59 NA NA Eif4ebp3 eukaryotic translation initiation factor 4E
|
106
|
+
108115 40.45 25.93 23.54 23.09 24.07 44.34 24.4 35.73 48.13 24.05 NA NA 27.48 21.82 18.13 37.28 38.95 48.3 27.23 26.07 28.84 23.74 39.92 44.59 NA 20.19 NA NA Slco4a1 solute carrier organic anion transporter family,,solute carrier organic anion transporter family,,
|
107
|
+
108121 5.77 9.98 10.5 11.73 15.28 7.62 9.41 8.69 8.04 8.16 NA NA 7.96 9.98 9.94 12.83 9.24 13.76 8.88 9.09 9.15 7.51 10.6 9.47 NA 14.58 NA NA U2af1 U2 small nuclear ribonucleoprotein auxiliary
|
108
|
+
108123 25.45 19.76 15.17 17.97 14.28 18.34 17.89 21.32 16.74 22.25 NA NA 24.4 24.4 25.07 19.21 23.18 17.48 19.62 23.39 18.91 19.21 18.53 22.37 NA 19.05 NA NA Napg N-ethylmaleimide sensitive fusion protein
|
109
|
+
108124 53.68 63.85 65.5 71.03 61.34 47.22 57.34 63.63 68.43 67.81 NA NA 51.47 61.59 64.86 58.04 61.05 69.34 58.63 58.54 55.39 60.19 51.05 56.36 NA 73.9 NA NA Napa N-ethylmaleimide sensitive fusion protein
|
110
|
+
108138 7.53 10.38 9.27 11.76 9.89 7.69 7.67 8.04 8.82 8.02 NA NA 9.68 7.61 7.84 8.97 8.45 12.82 9.47 8.57 8.12 9.06 7.9 7.73 NA 11.13 NA NA Xrcc4 X-ray repair complementing defective repair in
|
111
|
+
108143 70.97 81.83 67.97 78.94 104.31 64.6 72.56 70.36 57.41 59.05 NA NA 79.27 80.32 83.99 92.18 52.04 111.08 88.19 67.06 62.49 107.57 83.36 63.58 NA 145.85 NA NA Taf9 TAF9 RNA polymerase II, TATA box binding protein,TAF9 RNA polymerase II, TATA box binding protein,
|
112
|
+
108147 31.65 47.66 49.08 49.95 40.59 33.74 38.2 41.17 33.33 39.82 NA NA 40.34 36.94 46.67 30.77 36.92 29.85 35.42 34.45 36.57 43.07 45.87 36.43 NA 52.96 NA NA Atic 5-aminoimidazole-4-carboxamide ribonucleotide,5-aminoimidazole-4-carboxamide ribonucleotide,
|
113
|
+
108148 35.68 38.89 33.6 29.38 28.47 38.74 22.78 43.12 30.53 32.39 NA NA 38.49 33.54 40.84 31.51 44.26 31.93 40.53 32.74 37.76 31.69 44.23 33.8 NA 34.44 NA NA Galnt2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
|
114
|
+
108150 35.76 28.13 19.47 26.09 20.38 34.58 16.33 47.52 19.15 25.1 NA NA 38.92 28.74 27.14 26.49 33.24 19.99 29.88 34.81 28.27 36.68 39.32 38.29 NA 18.99 NA NA Galnt7 UDP-N-acetyl-alpha-D-galactosamine: polypeptide
|
115
|
+
108155 18.09 20.16 13.7 15.06 11.01 19.71 9.14 15.81 20.65 17.43 NA NA 23.27 19.61 13.23 17.68 20.62 13.44 16.37 19.43 22.44 17.49 21.63 15.7 NA 11.58 NA NA Ogt O-linked N-acetylglucosamine transferase,O-linked N-acetylglucosamine transferase,
|
116
|
+
108156 21.76 22.29 25.76 16.91 16.78 21.95 12.09 21.61 17.41 23.01 NA NA 25.95 23.07 22.61 18.22 23.72 20.81 22.18 20.1 23.65 21.87 30.34 21.52 NA 21.25 NA NA Mthfd1 methylenetetrahydrofolate dehydrogenase 1
|
117
|
+
108159 11.91 10.41 9.35 8.55 13.55 6.16 9.81 11.43 5.96 7.11 NA NA 12.49 11.66 9.06 11.03 6.8 15.82 7.37 11.13 12.23 12.25 9 10.13 NA 10.28 NA NA Ubxd6 UBX domain containing 6
|
118
|
+
108160 56.81 56.46 51.19 53.2 58.07 51.11 53.14 54.41 63.6 73.5 NA NA 47.72 55.1 50.63 61.36 45.59 50.08 66.04 51.07 52.57 56.14 41.45 64.67 NA 59.42 NA NA D0HXS9928E DNA segment, human DXS9928E
|
119
|
+
108645 31.96 45.42 44.07 49.61 50.05 30.66 58.68 37.41 37.26 33.87 NA NA 35.88 38.54 35.15 57.21 38.21 55.74 35.81 36.55 40.65 39.59 38.35 31.91 NA 54.2 NA NA Mat2b methionine adenosyltransferase II, beta,methionine adenosyltransferase II, beta,
|
120
|
+
108652 4.52 7.95 13.04 6.15 9.75 6 15.33 5.9 6.05 6.52 NA NA 7.02 7.91 7.89 12.85 6.96 10.45 7.95 6.39 6.72 6.47 7 5.6 NA 10.39 NA NA Slc35b3 solute carrier family 35, member B3,solute carrier family 35, member B3,
|
121
|
+
108655 18.75 19.71 19 12.57 14.77 23.35 10.63 21.7 25.72 20.43 NA NA 25.11 21.88 19.02 19.43 24.6 15.17 20.04 20.8 24.25 19.13 26.8 20.76 NA 10.13 NA NA Foxp1 forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,
|
122
|
+
108657 20.1 16.32 15.6 14.53 12.91 19.09 13.48 19.39 17.64 18.81 NA NA 21.61 17.56 16.46 12.87 19.48 12.09 19.31 18.05 17.85 18.48 16.72 19.22 NA 12.24 NA NA Rnpepl1 arginyl aminopeptidase (aminopeptidase B)-like
|
123
|
+
108664 87.01 120.6 113.05 133.28 73.64 83.33 126.73 96.89 99.79 104.67 NA NA 93.45 87.04 101.7 95.08 88.22 104.26 104.64 89.4 85.64 116 103.01 89.33 NA 130.92 NA NA Atp6v1h ATPase, H+ transporting, lysosomal V1 subunit H
|
124
|
+
108670 57.59 86.82 76.66 42.08 80.77 101.3 104.17 116.64 92.08 50.49 NA NA 78.06 49.68 66.77 109.24 74.93 57.88 38.11 41.22 86.06 93.86 15.36 57.26 NA 54.28 NA NA Epsti1 epithelial stromal interaction 1 isoform a
|
125
|
+
108671 35.18 30.85 23.76 22.31 30.06 27.92 21.18 23 21.35 18.92 NA NA 35.05 33.24 30.53 34.19 24.93 37.43 20.76 23.46 39.39 21.25 42.8 23.54 NA 26.4 NA NA Dnajc9 DnaJ homolog, subfamily C, member 9
|
126
|
+
108673 19.65 17.58 22.36 20.23 19.24 24.51 23.63 27.27 17.05 22.95 NA NA 15.65 25.48 21.12 23.88 19.75 20.33 24.61 20.6 18.51 24.18 10.64 26.5 NA 21.01 NA NA Ccdc86 coiled-coil domain containing 86
|
127
|
+
108679 39.49 46.77 39.56 58.02 54.29 33.78 69.42 37.14 40.55 46.07 NA NA 41.67 44.55 46.57 48.51 43.16 58.85 43.43 39.86 36.15 42.62 42.71 39.3 NA 70.81 NA NA Cops8 COP9 signalosome subunit 8
|
128
|
+
108687 10.57 16.3 17.44 20.02 14.37 19 22.33 19.8 18.95 19.69 NA NA 16.88 16.5 18.83 14.44 19.23 17.11 16.99 15.95 17.63 18.9 14.56 16.12 NA 22.3 NA NA Edem2 putative alpha-mannosidase
|
129
|
+
108689 13.47 14.57 13.92 12.54 14.28 12.69 13.49 13.73 12.29 12.43 NA NA 14.7 13.27 14.63 10.75 11.89 13.47 11.12 11.75 12.66 12.9 18.13 13.19 NA 12.04 NA NA Obfc1 oligonucleotide/oligosaccharide-binding fold,oligonucleotide/oligosaccharide-binding fold,
|
130
|
+
108705 47.85 69.93 68.89 74.15 54.06 50.99 67.2 67.09 68.52 64.1 NA NA 61.22 57.54 63.47 63.94 68.57 63.98 72 58.82 56.28 71.68 68.19 61.9 NA 78.47 NA NA Pttg1ip pituitary tumor-transforming gene 1
|
131
|
+
108723 10.91 8.21 4.72 3.5 8.82 10.67 3.02 23.5 13.1 2.81 NA NA 11.83 4.08 9.45 15.88 12.07 3.51 8.27 7.99 10.07 11.68 2.18 6.97 NA 2.26 NA NA Card11 caspase recruitment domain family, member 11,caspase recruitment domain family, member 11,
|
132
|
+
108737 23.63 16.83 12.31 12.77 9.62 15.86 11.13 18.95 13.15 16.44 NA NA 17.41 14.62 15.4 7.36 18.88 8.21 14.18 16.23 17.04 15.26 21.59 15.19 NA 12.61 NA NA Oxsr1 oxidative-stress responsive 1,oxidative-stress responsive 1,
|
133
|
+
108767 22.91 16.83 14.32 11.93 14.72 20.46 12.87 14.47 21.25 11.59 NA NA 16.62 14.51 17.75 13.85 19.18 19.9 20.15 21.59 18.24 16.16 19.5 16.66 NA 15.79 NA NA Pnrc1 proline-rich nuclear receptor coactivator 1
|
134
|
+
108837 9.97 7.72 6.16 6.9 7.61 9.94 5.61 10.95 6.47 9.75 NA NA 9.68 8.12 9.51 6.65 9.69 6.11 7.61 8.86 8.64 8 10.85 8.86 NA 5.53 NA NA Ibtk inhibitor of Bruton's tyrosine kinase,inhibitor of Bruton's tyrosine kinase,
|
135
|
+
108888 13.21 15.83 10.69 13.55 14.17 14.82 10.84 15.06 16.2 17.48 NA NA 14.87 16.36 13.02 15.29 13.6 11.65 14.47 11.92 13.55 15.69 13.44 16.07 NA 11.28 NA NA Atad3a AAA-ATPase TOB3
|
136
|
+
108902 17.68 20.65 20.42 19.62 18.96 16.98 16.8 18.81 18.85 18.19 NA NA 17.01 18.06 19.11 17.49 21.58 23.62 18.65 17.92 18.22 21.8 22.78 18.89 NA 22.12 NA NA B3gnt1 beta-1,3-N-acetylglucosaminyltransferase bGnT-6,beta-1,3-N-acetylglucosaminyltransferase bGnT-6,
|
137
|
+
108903 36.48 35.95 29.82 32.23 23.83 32.08 30.11 33.22 27.06 28.07 NA NA 37.58 28.51 38.59 21.34 30.26 22.56 27.13 28.43 29.64 32.79 33.23 25.71 NA 37 NA NA Tbcd tubulin-specific chaperone d
|
138
|
+
108907 33.38 18.88 13.76 7.19 13.89 17.86 7.75 16.32 10.34 12.87 NA NA 25.52 20.23 24.28 24.38 17.71 24.13 8.26 14.27 26 13.35 37.65 16.09 NA 10.69 NA NA Nusap1 nucleolar and spindle associated protein 1
|
139
|
+
108911 83.28 90.65 79.06 72.35 71.22 89.45 51.65 86.48 63.31 60.2 NA NA 99.88 74.93 81.7 59.96 69.62 51.69 63.99 59.23 87.37 80.58 93.72 79.49 NA 63.27 NA NA Rcc2 RCC1-like
|
140
|
+
108960 12.53 14.13 18.6 15.68 15.85 15.96 21.73 20.96 15.88 21.01 NA NA 11.08 15.97 18.46 13.17 16.25 11.49 17.72 19.7 13.87 15.53 9.77 21.02 NA 16.64 NA NA Irak2 interleukin-1 receptor-associated kinase 2,interleukin-1 receptor-associated kinase 2,interleukin-1 receptor-associated kinase 2,
|
141
|
+
108961 15.59 8.3 6.34 3.17 7.55 12.21 3.23 8.49 6.22 7.42 NA NA 15.73 12.41 10.66 11.51 10.87 8.95 6.59 9.1 15.58 6.36 20.17 8.5 NA 4.43 NA NA E2f8 E2F transcription factor 8,E2F transcription factor 8,
|
142
|
+
108989 21.25 14.87 12.73 6.23 14.97 23.71 4.04 20.98 22.79 20.17 NA NA 20.07 24.17 8.92 16.92 16.78 7.55 16.89 24.41 27.18 9.82 15.39 29.01 NA 6.64 NA NA Tpr nuclear pore complex-associated protein Tpr,nuclear pore complex-associated protein Tpr,nuclear pore complex-associated protein Tpr,
|
143
|
+
109006 14.9 12.73 9.88 22.82 25.13 8.05 12.22 19 17.89 9.26 NA NA 15.81 9.13 18.29 12.24 15.51 12.34 8.85 15.15 18.29 17.86 7.57 15.43 NA 14.19 NA NA Ciapin1 cytokine induced apoptosis inhibitor 1
|
144
|
+
109019 14.64 10.45 15.86 15.4 15.45 10.96 14.38 22.92 12.49 11.16 NA NA 11.18 9.44 15.46 14.85 11.84 17.33 16.67 14.82 15.32 17.23 14.66 14.23 NA 14.9 NA NA Obfc2a oligonucleotide/oligosaccharide-binding fold,oligonucleotide/oligosaccharide-binding fold,
|
145
|
+
109032 20.66 15.59 14.27 17.4 25.88 27.13 24.46 24.32 17.18 13.9 NA NA 16.62 19.86 25.17 26.47 18.93 15.92 17.37 19.49 23.1 18.05 8.76 24.7 NA 19.91 NA NA Sp110 Sp110 nuclear body protein,Sp110 nuclear body protein,Sp110 nuclear body protein,
|
146
|
+
109054 30.75 33.94 27.82 26.51 36.7 22.29 37.06 27.42 27.56 22.31 NA NA 20.07 25.45 31.64 45.33 28.99 54.52 26.47 24.85 25.1 25.91 29.71 21.18 NA 42.75 NA NA Pfdn4 prefoldin 4
|
147
|
+
109075 14.27 20.39 24.69 23.81 35.89 14.36 28.73 17.01 19.75 16.42 NA NA 15.26 19.58 16 20.55 17.67 25.61 16.32 16.59 16.83 18.91 14.78 15.99 NA 29.5 NA NA Exosc4 exosome component 4
|
148
|
+
109077 14.63 14.28 14.25 13.75 10.99 11.4 9.86 12.49 9.73 12.47 NA NA 14.39 10.83 13.01 9.89 13.42 11.88 13.2 12.2 13.49 11.75 13.75 12.72 NA 11.81 NA NA Ints5 integrator complex subunit 5
|
149
|
+
109079 13.68 10.53 9.25 8.98 8.86 8.64 5.7 9.17 7.01 8.7 NA NA 11.97 10.53 10.85 9.86 10.13 10.28 7.81 8.6 10.63 7.98 13.67 7.94 NA 8.45 NA NA Sephs1 selenophosphate synthetase 1,selenophosphate synthetase 1,
|
150
|
+
109082 21.44 22.71 19.52 19.91 22.74 26.81 20.5 22.92 23.3 14.64 NA NA 23.03 23.24 22.89 27.95 22.64 21.91 20.11 22.41 22.33 20.87 14.64 24.52 NA 23.92 NA NA Fbxw17 F-box and WD-40 domain protein 17
|
151
|
+
109093 12.7 15.09 12.64 15.91 16.75 8.94 13.28 14.63 13.84 15.24 NA NA 13.29 12.62 12.85 16.29 12.59 13.25 13.19 12.43 10.56 15.07 13.9 12.11 NA 18.91 NA NA Rars2 arginyl-tRNA synthetase-like
|
152
|
+
109108 13.81 14.75 14.59 13.81 11.63 14.2 14.04 15.16 15.19 15.7 NA NA 14.3 16.32 15.48 14.08 16.37 12.54 14.41 14.86 13.02 13.68 12.82 14.03 NA 16.86 NA NA Slc30a9 solute carrier family 30 (zinc transporter),,solute carrier family 30 (zinc transporter),,solute carrier family 30 (zinc transporter),,
|
153
|
+
109113 44.3 39.61 39.56 42.76 25.93 40.93 34.01 45.4 38.07 37.52 NA NA 44.92 38.96 38.09 40.57 43.58 33.18 46.14 38.45 38.28 45.12 45.17 36.75 NA 30.02 NA NA Uhrf2 ubiquitin-like, containing PHD and RING finger,ubiquitin-like, containing PHD and RING finger,
|
154
|
+
109115 10.51 10.13 11.72 10.6 10.88 7.15 11.69 11.12 9.74 10.49 NA NA 9.1 9.87 7.69 12.18 8.55 12.63 12.11 9.33 8.44 10.16 10.43 11.47 NA 11.64 NA NA Supt3h suppressor of Ty 3 homolog
|
155
|
+
109129 45.45 63.88 50.6 71.04 80.37 48.71 81.39 54.01 52.41 57.54 NA NA 54.08 60.31 62.65 74.14 50.34 78.01 48.14 50.33 53.09 50.83 54.88 49.58 NA 85.41 NA NA 2010311D03Rik hypothetical protein LOC109129
|
156
|
+
109145 10.03 18.6 12.45 13.47 17.31 13.66 18.46 15.23 11.33 12.61 NA NA 19.46 15.99 17.91 18.31 15.04 20.7 12.52 13.92 21.58 15.69 18.69 13.6 NA 22.11 NA NA Gins4 SLD5
|
157
|
+
109154 68.81 54.81 42.44 46.78 40.36 63.99 36.64 51.31 32.27 48.7 NA NA 64.61 48.84 56.15 33.67 48.34 39.1 44.27 44.94 67.86 45.06 63.62 38.73 NA 37.85 NA NA 2410014A08Rik hypothetical protein LOC109154
|
158
|
+
109161 9.57 10.41 9.52 9.95 6.85 9.29 9.35 8.98 9.04 10.07 NA NA 9.06 9.87 8.64 11.49 9.21 10.37 9.71 9.01 7.86 8.68 9.54 9.33 NA 10.64 NA NA Ube2q2 ubiquitin-conjugating enzyme E2Q 2
|
159
|
+
109212 40.18 27.67 21.63 13.74 24.53 26.02 14.05 15.85 15.12 12.29 NA NA 36.77 24.27 27.2 31.67 25.85 49.13 13.26 15.98 39.43 17.81 45.94 16.91 NA 22.78 NA NA 6720460F02Rik hypothetical protein LOC109212
|
160
|
+
109225 55.15 253.8 243.69 323.83 223.14 202.69 614.56 211.98 416.25 247.56 NA NA 110.75 132.82 305.54 582.38 145.64 226.68 259.92 153.4 127.28 342.97 109.95 176.22 NA 243.65 NA NA Ms4a7 membrane-spanning 4-domains, subfamily A, member
|
161
|
+
109229 16.8 13.36 20.54 16.24 11.23 11.71 24.54 13.53 11.66 13.24 NA NA 12.87 10.74 14.46 12.88 14.69 16.03 16.01 14.14 14.09 15.8 15.09 11.22 NA 20.69 NA NA Ppp4r1l protein phosphatase 4, regulatory subunit 1-like
|
162
|
+
109232 3.81 12.41 5.4 6.59 6.87 5.27 7.34 4.38 5.83 6.79 NA NA 6.11 8.39 6.89 8.22 6.33 7.52 6.46 7.01 8.88 7.89 9.21 4.05 NA 10.99 NA NA Sccpdh saccharopine dehydrogenase (putative)
|
163
|
+
109284 50.62 46.35 46.93 55.66 60.05 45.34 42.92 38.97 43.77 37.85 NA NA 51.5 40.12 47.5 41.82 42.38 46.8 46.87 41.98 44.53 49.38 44.15 43.71 NA 57.65 NA NA C030046I01Rik hypothetical protein LOC109284
|
164
|
+
109305 29.26 36.24 40.02 32.96 37.26 26.84 32.87 30.79 30.65 28.78 NA NA 36.18 33.18 40.84 34.89 31.37 37.99 32.53 32.52 32.47 34.22 28.92 28.58 NA 40.73 NA NA Orai1 transmembrane protein 142A,transmembrane protein 142A,
|
165
|
+
109331 19.9 14.47 12.48 10.46 13.79 15.69 7.09 15.43 17.34 17.71 NA NA 16.33 15.56 13.66 14.82 16.35 10.67 15.16 14.16 17.33 12.89 14.82 18.07 NA 9.24 NA NA Rnf20 ring finger protein 20,ring finger protein 20,
|
166
|
+
109359 29.54 31.02 29.09 29.62 19.34 27.25 26.35 31.62 28.77 31.68 NA NA 26.04 27.48 30.09 25.17 30.62 25.58 37.53 33.28 25.64 34.08 31.09 31.23 NA 28.43 NA NA C430003P19Rik hypothetical protein LOC109359,hypothetical protein LOC109359,
|
167
|
+
109552 56.27 45.76 36.91 49.02 58.03 31.26 58.47 41.91 43.71 38.04 NA NA 39.93 39.49 42.09 46.48 38.69 61.83 37.9 40.92 38.82 37.01 39.84 36 NA 60.42 NA NA Sri sorcin isoform 1
|
168
|
+
109648 1171.23 771.99 1289.35 1663.19 1628.95 856.49 2315.92 1825.82 1347.59 1186.82 NA NA 627.45 952.99 1281.94 1116.12 1016.32 1699.46 1142.85 946.81 666.24 1076.77 385.55 1298.5 NA 1542.05 NA NA Npy neuropeptide Y
|
169
|
+
109658 20.9 22.98 16.05 15.98 13.75 23.68 15.36 22.42 20.03 22.89 NA NA 25.6 21.7 22.4 18.11 22.76 15.43 21.98 22.59 22.99 21.81 25.14 23.44 NA 15.85 NA NA Txlna taxilin alpha,taxilin alpha,
|
170
|
+
109672 128.29 168.71 224.15 156.6 215.57 133.13 188.13 185.07 181 132.51 NA NA 148.8 170.87 166.07 241.91 161.31 311.4 159.99 162.61 185.37 149.35 163.42 143.88 NA 227.93 NA NA Cyb5 cytochrome b-5
|
171
|
+
109674 12.64 13.13 12.78 11.98 15.55 16.98 9.8 17 14.38 14.69 NA NA 15.31 16.03 16.74 12.28 15.44 12.63 14.36 12.99 14.81 13.86 15.25 15.81 NA 12.85 NA NA Ampd2 adenosine monophosphate deaminase 2 (isoform L),adenosine monophosphate deaminase 2 (isoform L),adenosine monophosphate deaminase 2 (isoform L),
|
172
|
+
109689 35.64 36.28 23.17 22.59 19.3 40.58 16.88 38.11 32.47 37.12 NA NA 50.2 29.82 42.2 19.92 33.59 22.93 31.41 36.96 38.03 32.69 43.86 30.58 NA 21.83 NA NA Arrb1 arrestin, beta 1 isoform A
|
173
|
+
109711 71.45 63.55 78.92 49.59 58.76 62.94 44.43 98.31 61.27 68.94 NA NA 80.8 68.71 52.31 59.11 69.01 54.99 75.75 73.97 70.17 86.1 72.68 87.21 NA 42.6 NA NA Actn1 actinin, alpha 1,actinin, alpha 1,
|
174
|
+
109754 154.44 109.54 122.34 104.12 103.61 132.78 99.98 108.43 117.77 127.13 NA NA 135.58 136.84 109.33 123.72 114.88 116.74 137.24 133.29 121.51 133.06 125.21 152.53 NA 112.74 NA NA Cyb5r3 diaphorase 1
|
175
|
+
109778 156.6 121.94 162.42 106.17 217.53 146.49 231.12 134.71 98.32 121.49 NA NA 97.1 171.82 187 237.32 147.12 163.74 90.47 85.96 129.58 149.84 200.22 81.83 NA 132.79 NA NA Blvra biliverdin reductase A,biliverdin reductase A,
|
176
|
+
109801 18.98 10.43 13.06 19.13 5.66 11.66 7.62 13.96 6.76 10.5 NA NA 8.34 9.19 8.13 7.48 6.47 7.25 8.2 6.81 7.35 17.68 8.9 4.45 NA 11.5 NA NA Glo1 glyoxalase 1
|
177
|
+
109815 72.84 70.03 65.14 86.45 85.84 55.04 80.67 58.7 60.97 55.26 NA NA 55.26 59.16 63.07 68.46 61.71 93.95 63.23 51.37 62.3 62.75 54.88 61.04 NA 95.14 NA NA H47 selenoprotein S
|
178
|
+
109857 6.31 9.24 20.51 11.2 17.7 8.88 12.94 9.64 4.02 5.07 NA NA 9.81 9.56 5.92 12.22 10.83 5.6 6.8 8.19 13.14 8.13 9.47 8.2 NA 17.02 NA NA Cbr3 carbonyl reductase 3
|
179
|
+
109900 44.24 54.97 54.4 60.32 70.9 49.88 73.58 50.1 58.67 52.74 NA NA 50.91 55.21 48.56 68.72 53.2 64.23 53.56 54.17 56.25 55.9 50.92 45.2 NA 69.18 NA NA Asl argininosuccinate lyase
|
180
|
+
109905 30.42 35.35 35.69 33.64 41.66 23.36 30.56 30.39 24.63 25.61 NA NA 28.76 26.6 36.02 42.2 29.25 42.64 27.96 32.51 39.06 28.1 32.28 21.96 NA 41.49 NA NA Rap1a RAS-related protein-1a
|
181
|
+
109910 36.41 30.54 26.1 22.39 20.88 32.42 17.15 31.67 30.17 30.83 NA NA 35.28 33.45 31.98 25.88 34.58 21.81 32.6 33.16 30.42 31.5 36.91 31.87 NA 17.99 NA NA Zfp91 zinc finger protein 91
|
182
|
+
109934 69.35 53 59.49 53.37 51.66 74.11 45.56 93.67 64.78 90.53 NA NA 70.52 65.19 49.16 51.31 70.36 41.11 70.44 72.63 65.52 71.31 54.52 77.42 NA 36.5 NA NA Abr active BCR-related isoform 1
|
183
|
+
110006 260.06 294.57 271 343.95 223.64 385.59 340.42 266.38 291.23 332.95 NA NA 368.66 365.26 394.32 289.81 394.45 319.95 364.21 397.6 346.62 387.66 317.44 244.51 NA 226.98 NA NA Gusb glucuronidase, beta
|
184
|
+
110012 33.61 42.56 48.34 45.57 73.03 32.89 67.66 30.84 38.49 29.45 NA NA 34.26 38.38 32.12 41.33 27.68 56.47 37.53 28.78 36.11 34.12 31.07 33.4 NA 58.7 NA NA Gtrgeo22 hypothetical protein LOC110012
|
185
|
+
110033 32.09 22.16 20.54 10.29 23.05 22.17 10.98 17.51 13.25 14.18 NA NA 31.62 24.02 25.45 24.95 20.03 27.15 11.5 16.63 33.37 14.85 34.26 17.78 NA 19.2 NA NA Kif22 kinesin family member 22
|
186
|
+
110052 61.38 22.97 23.89 14.71 16.48 38.04 10.74 23.02 22.85 26.55 NA NA 38.34 35.03 30.62 29.41 27.94 20.55 19.85 24.25 36.12 22.85 41.21 31.15 NA 16.9 NA NA Dek DEK oncogene (DNA binding),DEK oncogene (DNA binding),
|
187
|
+
110074 26.87 21.62 16.9 13.73 24.63 13.47 14.81 11.1 11.05 11.45 NA NA 21.06 20.56 22.62 26.09 16.77 33.57 9.81 10.81 23.29 12.09 28.38 11.06 NA 24.11 NA NA Dut deoxyuridine triphosphatase,deoxyuridine triphosphatase,
|
188
|
+
110078 34.26 31.91 26.69 24.9 23.12 31.4 21.41 34.15 28.1 28.13 NA NA 36.85 30.56 32.14 26.71 36.68 23.63 30.5 34.82 32.85 30.62 35.26 30.5 NA 22.83 NA NA Pygb brain glycogen phosphorylase
|
189
|
+
110094 22.02 25.06 25.41 22.99 23.81 26.8 17.49 27.71 20.98 21.73 NA NA 33.46 25.65 18.17 24.27 24.63 17.12 23.86 27.52 23.64 27.6 26.82 27.31 NA 19.26 NA NA Phka2 phosphorylase kinase alpha 2,phosphorylase kinase alpha 2,phosphorylase kinase alpha 2,
|
190
|
+
110095 10.67 21.6 18.16 13.56 13.5 20.4 8.02 11.88 21.35 12.97 NA NA 13.74 13.05 19.43 9.92 14.08 13.05 18.8 20.29 16.24 14.05 20.8 15.05 NA 16.01 NA NA Pygl liver glycogen phosphorylase
|
191
|
+
110109 33.16 38.08 35.04 29.54 35.06 29.52 23.61 33.55 30.62 34.35 NA NA 31.3 32.1 26.08 29.08 31.39 27.11 37.77 29.13 30.49 33.22 26.82 34.8 NA 29.91 NA NA Nol1 nucleolar protein 1
|
192
|
+
110119 7.09 11.22 9.97 10.77 13.85 8.65 13.18 10.3 10.26 11.72 NA NA 11.28 9.57 10.09 13.18 9.12 11.63 9.72 11.37 11.26 10.94 7.71 10.82 NA 14.09 NA NA Mpi mannose phosphate isomerase
|
193
|
+
110147 68.55 56.77 44.51 46.96 49.31 66.09 38.91 51.36 49.61 40.57 NA NA 64.12 51.31 51.78 49.08 56.12 45.42 49.06 51.66 62.13 50.8 60.76 54.6 NA 40.16 NA NA Ehmt2 euchromatic histone lysine N-methyltransferase 2,euchromatic histone lysine N-methyltransferase 2,
|
194
|
+
110157 24.05 29.85 29.03 28.75 27.17 28.5 25.88 32.18 30.42 30.69 NA NA 31.2 30.74 32.62 26.15 29.37 25.09 27.98 28.69 29.77 28.96 29.69 27.36 NA 27.21 NA NA Raf1 protein kinase raf 1,protein kinase raf 1,protein kinase raf 1,
|
195
|
+
110172 54.79 58.96 60.95 79.17 61.06 62.44 66.8 54.47 55.38 51.5 NA NA 69.42 53.55 75.5 63.23 57.74 68.3 49.93 48.57 61.73 55.5 49.72 44 NA 72.57 NA NA Slc35b1 solute carrier family 35, member B1
|
196
|
+
110173 9.97 18.59 12.35 13.67 14.56 14.63 12.69 18.49 14.23 16.23 NA NA 20.48 16.47 20.68 13.14 18.88 14.3 13.67 20.54 15.99 16.15 21.33 17.06 NA 16.05 NA NA Manba mannosidase, beta A, lysosomal,mannosidase, beta A, lysosomal,mannosidase, beta A, lysosomal,
|
197
|
+
110196 11.21 27.98 12.13 16.57 16.77 12.76 14.31 13.07 9.22 10.51 NA NA 29.03 16.7 7.62 24.09 15.31 28.3 10.92 14.73 23.27 15.13 36.77 10.05 NA 15.15 NA NA Fdps farnesyl diphosphate synthetase
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: bio-table
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.0
|
4
|
+
version: 0.8.0
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -9,11 +9,11 @@ authors:
|
|
9
9
|
autorequire:
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
|
-
date: 2012-
|
12
|
+
date: 2012-11-01 00:00:00.000000000Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: bio-logger
|
16
|
-
requirement: &
|
16
|
+
requirement: &23241080 !ruby/object:Gem::Requirement
|
17
17
|
none: false
|
18
18
|
requirements:
|
19
19
|
- - ! '>='
|
@@ -21,10 +21,10 @@ dependencies:
|
|
21
21
|
version: '0'
|
22
22
|
type: :runtime
|
23
23
|
prerelease: false
|
24
|
-
version_requirements: *
|
24
|
+
version_requirements: *23241080
|
25
25
|
- !ruby/object:Gem::Dependency
|
26
26
|
name: rspec
|
27
|
-
requirement: &
|
27
|
+
requirement: &23240480 !ruby/object:Gem::Requirement
|
28
28
|
none: false
|
29
29
|
requirements:
|
30
30
|
- - ~>
|
@@ -32,10 +32,10 @@ dependencies:
|
|
32
32
|
version: 2.8.0
|
33
33
|
type: :development
|
34
34
|
prerelease: false
|
35
|
-
version_requirements: *
|
35
|
+
version_requirements: *23240480
|
36
36
|
- !ruby/object:Gem::Dependency
|
37
37
|
name: rdoc
|
38
|
-
requirement: &
|
38
|
+
requirement: &23239900 !ruby/object:Gem::Requirement
|
39
39
|
none: false
|
40
40
|
requirements:
|
41
41
|
- - ~>
|
@@ -43,10 +43,10 @@ dependencies:
|
|
43
43
|
version: '3.12'
|
44
44
|
type: :development
|
45
45
|
prerelease: false
|
46
|
-
version_requirements: *
|
46
|
+
version_requirements: *23239900
|
47
47
|
- !ruby/object:Gem::Dependency
|
48
48
|
name: cucumber
|
49
|
-
requirement: &
|
49
|
+
requirement: &23238540 !ruby/object:Gem::Requirement
|
50
50
|
none: false
|
51
51
|
requirements:
|
52
52
|
- - ! '>='
|
@@ -54,10 +54,10 @@ dependencies:
|
|
54
54
|
version: '0'
|
55
55
|
type: :development
|
56
56
|
prerelease: false
|
57
|
-
version_requirements: *
|
57
|
+
version_requirements: *23238540
|
58
58
|
- !ruby/object:Gem::Dependency
|
59
59
|
name: bundler
|
60
|
-
requirement: &
|
60
|
+
requirement: &23237420 !ruby/object:Gem::Requirement
|
61
61
|
none: false
|
62
62
|
requirements:
|
63
63
|
- - ! '>'
|
@@ -65,10 +65,10 @@ dependencies:
|
|
65
65
|
version: 1.0.0
|
66
66
|
type: :development
|
67
67
|
prerelease: false
|
68
|
-
version_requirements: *
|
68
|
+
version_requirements: *23237420
|
69
69
|
- !ruby/object:Gem::Dependency
|
70
70
|
name: jeweler
|
71
|
-
requirement: &
|
71
|
+
requirement: &23236880 !ruby/object:Gem::Requirement
|
72
72
|
none: false
|
73
73
|
requirements:
|
74
74
|
- - ~>
|
@@ -76,10 +76,10 @@ dependencies:
|
|
76
76
|
version: 1.8.3
|
77
77
|
type: :development
|
78
78
|
prerelease: false
|
79
|
-
version_requirements: *
|
79
|
+
version_requirements: *23236880
|
80
80
|
- !ruby/object:Gem::Dependency
|
81
81
|
name: bio
|
82
|
-
requirement: &
|
82
|
+
requirement: &23236300 !ruby/object:Gem::Requirement
|
83
83
|
none: false
|
84
84
|
requirements:
|
85
85
|
- - ! '>='
|
@@ -87,10 +87,10 @@ dependencies:
|
|
87
87
|
version: 1.4.2
|
88
88
|
type: :development
|
89
89
|
prerelease: false
|
90
|
-
version_requirements: *
|
90
|
+
version_requirements: *23236300
|
91
91
|
- !ruby/object:Gem::Dependency
|
92
92
|
name: rdoc
|
93
|
-
requirement: &
|
93
|
+
requirement: &23014480 !ruby/object:Gem::Requirement
|
94
94
|
none: false
|
95
95
|
requirements:
|
96
96
|
- - ~>
|
@@ -98,10 +98,10 @@ dependencies:
|
|
98
98
|
version: '3.12'
|
99
99
|
type: :development
|
100
100
|
prerelease: false
|
101
|
-
version_requirements: *
|
101
|
+
version_requirements: *23014480
|
102
102
|
- !ruby/object:Gem::Dependency
|
103
103
|
name: regressiontest
|
104
|
-
requirement: &
|
104
|
+
requirement: &23013780 !ruby/object:Gem::Requirement
|
105
105
|
none: false
|
106
106
|
requirements:
|
107
107
|
- - ! '>='
|
@@ -109,7 +109,7 @@ dependencies:
|
|
109
109
|
version: 0.0.2
|
110
110
|
type: :development
|
111
111
|
prerelease: false
|
112
|
-
version_requirements: *
|
112
|
+
version_requirements: *23013780
|
113
113
|
description: Functions and tools for tranforming and changing tab delimited and comma
|
114
114
|
separated table files - useful for Excel sheets and SQL/RDF output
|
115
115
|
email: pjotr.public01@thebird.nl
|
@@ -131,10 +131,12 @@ files:
|
|
131
131
|
- bin/bio-table
|
132
132
|
- features/bio-table-csv-reader.feature
|
133
133
|
- features/cli.feature
|
134
|
+
- features/filters.feature
|
134
135
|
- features/iterate_table.feature
|
135
136
|
- features/step_definitions/bio-table-csv-reader-feature.rb
|
136
137
|
- features/step_definitions/bio-table_steps.rb
|
137
138
|
- features/step_definitions/cli-feature.rb
|
139
|
+
- features/step_definitions/filters.rb
|
138
140
|
- features/step_definitions/iterate_table.rb
|
139
141
|
- features/support/env.rb
|
140
142
|
- lib/bio-table.rb
|
@@ -148,6 +150,7 @@ files:
|
|
148
150
|
- lib/bio-table/parser.rb
|
149
151
|
- lib/bio-table/rdf.rb
|
150
152
|
- lib/bio-table/rewrite.rb
|
153
|
+
- lib/bio-table/statistics.rb
|
151
154
|
- lib/bio-table/table.rb
|
152
155
|
- lib/bio-table/table_apply.rb
|
153
156
|
- lib/bio-table/tableload.rb
|
@@ -168,11 +171,15 @@ files:
|
|
168
171
|
- test/data/regression/table1-columns-regex.ref
|
169
172
|
- test/data/regression/table1-columns.ref
|
170
173
|
- test/data/regression/table1-diff.ref
|
174
|
+
- test/data/regression/table1-filter-0_1.ref
|
175
|
+
- test/data/regression/table1-filter-named-0_1.ref
|
171
176
|
- test/data/regression/table1-html.ref
|
172
177
|
- test/data/regression/table1-latex.ref
|
173
178
|
- test/data/regression/table1-merge.ref
|
179
|
+
- test/data/regression/table1-named-0_05.ref
|
174
180
|
- test/data/regression/table1-rdf1.ref
|
175
181
|
- test/data/regression/table1-rewrite-rownames.ref
|
182
|
+
- test/data/regression/table_counter_filter.ref
|
176
183
|
- test/data/regression/table_filter_headers.ref
|
177
184
|
- test/data/regression/table_split_on_regex.ref
|
178
185
|
- test/data/regression/table_split_on_string.ref
|
@@ -191,7 +198,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
|
191
198
|
version: '0'
|
192
199
|
segments:
|
193
200
|
- 0
|
194
|
-
hash:
|
201
|
+
hash: 2239873243896303303
|
195
202
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
196
203
|
none: false
|
197
204
|
requirements:
|
@@ -200,7 +207,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
200
207
|
version: '0'
|
201
208
|
requirements: []
|
202
209
|
rubyforge_project:
|
203
|
-
rubygems_version: 1.8.
|
210
|
+
rubygems_version: 1.8.10
|
204
211
|
signing_key:
|
205
212
|
specification_version: 3
|
206
213
|
summary: Swiss army knife of tabulated data; transforming/filtering tab/csv files
|