bio-table 0.0.1 → 0.0.2
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- data/README.md +34 -5
- data/Rakefile +1 -1
- data/VERSION +1 -1
- data/bin/bio-table +28 -3
- data/lib/bio-table.rb +3 -0
- data/lib/bio-table/diff.rb +1 -5
- data/lib/bio-table/filter.rb +14 -1
- data/lib/bio-table/indexer.rb +21 -0
- data/lib/bio-table/merge.rb +34 -0
- data/lib/bio-table/rewrite.rb +16 -0
- data/lib/bio-table/table.rb +29 -5
- data/lib/bio-table/tablereader.rb +1 -0
- data/lib/bio-table/tablerow.rb +5 -1
- data/test/data/input/table2.csv +374 -0
- metadata +25 -21
data/README.md
CHANGED
@@ -2,6 +2,7 @@
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[![Build Status](https://secure.travis-ci.org/pjotrp/bioruby-table.png)](http://travis-ci.org/pjotrp/bioruby-table)
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bio-table is the swiss knife of tabular data.
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Tables of data are often used in bioinformatics, especially in
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conjunction with Excel spreadsheets and DB queries. This biogem
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contains support for reading tables, writing tables, and manipulation
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@@ -105,6 +106,25 @@ or use their index numbers
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bio-table test/data/input/table1.csv --columns 0,1,8,2,4,6 > test1a.tab
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```
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To filter for columns using a regular expression
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```
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bio-table table1.csv --column-filter 'colname !~ /infected/i'
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```
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will drop all columns with names containing 'infected', ignoring
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case.
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Finally we can rewrite the content of a table using rowname and fields
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again
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```
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bio-table table1.csv --rewrite 'rowname.upcase!; field[1]=nil if field[2].to_f<0.25'
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```
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where we rewrite the rowname in capitals, and set the second field to
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empty if the third field is below 0.25.
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### Sorting a table
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To sort a table on column 4 and 2
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@@ -116,21 +136,30 @@ To sort a table on column 4 and 2
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Note: not all is implemented (just yet). Please check bio-table --help first.
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-
### Combining
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+
### Combining/merging tables
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-
You can combine/concat tables by passing in multiple file names
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You can combine/concat two or more tables by passing in multiple file names
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bio-table test/data/input/table1.csv test/data/input/table2.csv
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-
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this will append table2 to table1, assuming they have the same headers
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(you can use the --columns switch!)
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To combine tables side by side use the --merge switch:
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bio-table --merge table1.csv table2.csv
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all rownames will be matched (i.e. the input table order do not need
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to be sorted). For non-matching rownames the fields will be filled
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with NA's, unless you add a filter, e.g.
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bio-table --merge table1.csv table2.csv --num-filter "values.compact.size == values.size"
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### Splitting a table
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Splitting a table by column is possible by named or indexed columns,
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see the --columns switch.
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more soon
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-
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### Diffing and overlapping tables
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With two tables it may be interesting to see the differences, or
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data/Rakefile
CHANGED
@@ -17,7 +17,7 @@ Jeweler::Tasks.new do |gem|
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gem.name = "bio-table"
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gem.homepage = "http://github.com/pjotrp/bioruby-table"
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gem.license = "MIT"
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-
gem.summary = %Q{
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+
gem.summary = %Q{Swiss knife of tabulated data; transforming/filtering tab/csv files}
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gem.description = %Q{Functions and tools for tranforming and changing tab delimited and comma separated table files - useful for Excel sheets and SQL/RDF output}
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gem.email = "pjotr.public01@thebird.nl"
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gem.authors = ["Pjotr Prins"]
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data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
0.0.
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1
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+
0.0.2
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data/bin/bio-table
CHANGED
@@ -44,15 +44,31 @@ opts = OptionParser.new do |o|
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options[:format] = par.to_sym
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end
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o.on('--num-filter
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o.on('--num-filter expression', 'Numeric filtering function') do |par|
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options[:num_filter] = par
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end
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o.on('--rewrite expression', 'Rewrite function') do |par|
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options[:rewrite] = par
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end
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o.on('--columns list', Array, 'List of column names or indices') do |l|
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options[:columns] = l
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end
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o.on('--
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o.on('--column-filter expression', 'Column name filtering function') do |par|
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options[:column_filter] = par
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end
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o.on('--merge','Merge tables by rowname') do
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options[:merge] = true
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end
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o.on('--diff list',Array,'Diff two input files on columns (default rownames)') do |l|
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if l.size==1 and File.exist?(l.first)
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ARGV.unshift l.first
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l = ["0"]
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end
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options[:diff] = l
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end
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@@ -120,7 +136,7 @@ include BioTable
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if options[:diff]
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logger.warn "Column settings are ignored for --diff" if options[:columns]
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-
logger.warn "Ignoring
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logger.warn "Ignoring extraneaous files "+ARGV[2..-1].join(",") if ARGV.size>2
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t1 = TableReader::read_file(ARGV[0], options)
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t2 = TableReader::read_file(ARGV[1], options)
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t = Diff::diff_tables(t1,t2, options)
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@@ -133,6 +149,15 @@ if options[:overlap]
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exit
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end
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if options[:merge]
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ts = []
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ARGV.each do | fn |
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ts << TableReader::read_file(fn, options)
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end
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t = Merge::merge_tables(ts, options)
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t.write(options)
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exit
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end
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ARGV.each do | fn |
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t = TableReader::read_file(fn, options)
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data/lib/bio-table.rb
CHANGED
@@ -9,9 +9,11 @@
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# In this file only require other files. Avoid other source code.
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require 'bio-logger'
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require 'bio-table/indexer.rb'
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require 'bio-table/columns.rb'
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require 'bio-table/validator.rb'
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require 'bio-table/filter.rb'
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require 'bio-table/rewrite.rb'
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require 'bio-table/parser.rb'
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require 'bio-table/formatter.rb'
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require 'bio-table/tablerow.rb'
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@@ -20,4 +22,5 @@ require 'bio-table/tablereader.rb'
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require 'bio-table/tablewriter.rb'
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require 'bio-table/diff.rb'
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require 'bio-table/overlap.rb'
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require 'bio-table/merge.rb'
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data/lib/bio-table/diff.rb
CHANGED
@@ -14,11 +14,7 @@ module BioTable
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logger.warn "Not all selected keys are unique!" if l1.uniq.size != l1.size or l2.uniq.size != l2.size
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diff = l2 - l1
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# create index for table 2
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-
idx2 =
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t2.each do | row |
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key = columns.map { |i| row.all_fields[i] }
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idx2[key] = row
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-
end
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idx2 = Indexer::create_index(t2,columns)
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diff.each do |values|
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t.push(t2.row_by_columns(columns.zip(values),idx2))
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end
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data/lib/bio-table/filter.rb
CHANGED
@@ -8,11 +8,13 @@ module BioTable
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#
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def Filter::create_column_index columns, header
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return nil if not columns
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# check whether columns is already a list of numbers
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numbers = columns.dup.delete_if { |v| not valid_int?(v) }
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if numbers.size == columns.size
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return columns.map { |v| v.to_i }
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end
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# create the index from names
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index = []
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columns.each do | name |
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pos = header.index(name)
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@@ -22,6 +24,17 @@ module BioTable
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return index
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end
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# Filter on (indexed) column names, using an expression and return
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# a new index
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def Filter::filter_column_index index, header, expression
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return index if not expression or expression == ""
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index = (0..header.size-1).to_a if index == nil
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index.map { |idx|
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colname = header[idx]
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(idx==0 || eval(expression) ? idx : nil)
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}.compact
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end
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def Filter::apply_column_filter fields, index
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if index
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index.map { |idx| fields[idx] }
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@@ -44,7 +57,7 @@ module BioTable
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values = fields.map { |field| (valid_number?(field) ? field.to_f : nil ) } # FIXME: not so lazy
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begin
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eval(code)
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-
rescue
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rescue Exception
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$stderr.print "Failed to evaluate ",fields," with ",code,"\n"
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raise
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end
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@@ -0,0 +1,21 @@
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module BioTable
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module Indexer
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# Create an index (Hash) of column field contents, pointing
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# to a TableRow
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def self.create_index table, columns
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idx = {}
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table.each do | row |
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idx[make_key(row,columns)] = row
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end
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idx
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end
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def self.make_key row, columns
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columns.map { |i| row.all_fields[i] }
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end
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end
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end
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@@ -0,0 +1,34 @@
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module BioTable
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module Merge
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def self.merge_tables(tables, options)
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logger = Bio::Log::LoggerPlus['bio-table']
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logger.info("Merging tables")
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headers = tables.first.header[0..0] +
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tables.map { |t| t.header[1..-1].map{|n| t.name+'-'+n} }.flatten
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t = Table.new(headers)
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# index tables on rownames
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idxs = []
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tables.each do |t|
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idxs << Indexer::create_index(t,[0])
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end
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# create a full list of rownames
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all_rownames = idxs.map { |idx| idx.keys }.flatten.uniq
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+
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# walk the tables and merge fields
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all_rownames.each do | rowname |
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row = TableRow.new(rowname)
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fields = tables.map { |t|
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fields = t.find_fields(rowname)
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row.append(fields)
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}
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t.push(row)
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end
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t
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+
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end
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end
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end
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@@ -0,0 +1,16 @@
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module BioTable
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module Rewrite
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def Rewrite::rewrite code, rowname, field
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return rowname,field if not code or code==""
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begin
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eval(code)
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rescue Exception
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$stderr.print "Failed to evaluate ",rowname," ",field," with ",code,"\n"
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raise
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end
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return rowname,field
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end
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end
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end
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data/lib/bio-table/table.rb
CHANGED
@@ -4,6 +4,7 @@ module BioTable
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include Enumerable
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attr_reader :filename, :name
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attr_reader :header, :rows, :rownames
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def initialize header=nil
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@@ -13,18 +14,28 @@ module BioTable
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@rownames = []
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end
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def set_name fn
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@filename = fn
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@name = File.basename(fn,File.extname(fn))
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+
end
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# Read lines (list of string) and add them to the table, setting row names
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# and row fields. The first row is assumed to be the header and ignored if the
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# header has been set.
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def read_lines lines, options = {}
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+
# get all the options
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21
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num_filter = options[:num_filter]
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22
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@logger.debug "Filtering on #{num_filter}" if num_filter
|
30
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+
rewrite = options[:rewrite]
|
31
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+
@logger.debug "Rewrite #{rewrite}" if rewrite
|
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32
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use_columns = options[:columns]
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@logger.debug "Filtering on columns #{use_columns}" if use_columns
|
25
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-
|
26
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-
@logger.debug "
|
27
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-
|
34
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+
column_filter = options[:column_filter]
|
35
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+
@logger.debug "Filtering on column names #{column_filter}" if column_filter
|
36
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+
include_rownames = options[:with_rownames]
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+
@logger.debug "Include row names" if include_rownames
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+
first_column = (include_rownames ? 0 : 1)
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28
39
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|
29
40
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# parse the header
|
30
41
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header = LineParser::parse(lines[0], options[:in_format])
|
@@ -32,16 +43,20 @@ module BioTable
|
|
32
43
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@header = header if not @header
|
33
44
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|
34
45
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column_index = Filter::create_column_index(use_columns,header)
|
46
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+
column_index = Filter::filter_column_index(column_index,header,column_filter)
|
35
47
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@header = Filter::apply_column_filter(header,column_index)
|
36
48
|
|
49
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+
# parse the rest
|
37
50
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(lines[1..-1]).each do | line |
|
38
51
|
fields = LineParser::parse(line, options[:in_format])
|
39
52
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fields = Filter::apply_column_filter(fields,column_index)
|
40
|
-
|
53
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+
rowname = fields[0]
|
41
54
|
data_fields = fields[first_column..-1]
|
42
55
|
next if not Validator::valid_row?(data_fields,@header,@rows)
|
43
56
|
next if not Filter::numeric(num_filter,data_fields)
|
44
|
-
|
57
|
+
(rowname, data_fields) = Rewrite::rewrite(rewrite,rowname,data_fields)
|
58
|
+
|
59
|
+
@rownames << rowname if not include_rownames # otherwise doubles rownames
|
45
60
|
@rows << data_fields
|
46
61
|
end
|
47
62
|
end
|
@@ -89,6 +104,15 @@ module BioTable
|
|
89
104
|
end
|
90
105
|
end
|
91
106
|
|
107
|
+
# Find a record by rowname and return the fields. Empty fields are nils.
|
108
|
+
def find_fields rowname
|
109
|
+
row = row_by_name(rowname)
|
110
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+
fields = (row ? row.fields : [])
|
111
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+
# fill fields with nil to match header length
|
112
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+
# say header=5 fields=2 fill=2 (skip rowname)
|
113
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+
fields.fill(nil,fields.size,header.size-1-fields.size)
|
114
|
+
end
|
115
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+
|
92
116
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def row_by_name name
|
93
117
|
self[rownames.index(name)]
|
94
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|
end
|
data/lib/bio-table/tablerow.rb
CHANGED
@@ -2,11 +2,15 @@ module BioTable
|
|
2
2
|
|
3
3
|
class TableRow
|
4
4
|
attr_reader :rowname, :fields
|
5
|
-
def initialize rowname, fields
|
5
|
+
def initialize rowname, fields = []
|
6
6
|
@rowname = rowname
|
7
7
|
@fields = fields
|
8
8
|
end
|
9
9
|
|
10
|
+
def append values
|
11
|
+
@fields += values
|
12
|
+
end
|
13
|
+
|
10
14
|
def all_fields
|
11
15
|
([@rowname] << @fields).flatten
|
12
16
|
end
|
@@ -0,0 +1,374 @@
|
|
1
|
+
#Gene,AJ,B6,Axb1,Axb2,Axb4,Axb12,AXB13,Axb15,Axb19,Axb23,Axb24,Bxa1,Bxa2,Bxa4,Bxa7,Bxa8,Bxa12,Bxa11,Bxa13,Bxa15,Bxa16,Axb5,Axb6,Axb8,Axb1,Bxa24,Bxa25,Bxa26,gene_symbol,gene_desc
|
2
|
+
105853,0.06,0,0,0,0,0,0.11,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Mal2,"MAL2 proteolipid protein"
|
3
|
+
105855,236.88,213.95,213.15,253.49,198,231.56,200.96,255.2,214.04,231.46,,,233.23,241.26,237.53,171.87,237.13,162.3,252.13,284.85,188.76,253.43,220.15,305.52,,217.42,,,Nckap1l,"NCK associated protein 1 like,NCK associated protein 1 like,"
|
4
|
+
105859,0,0.14,0,0,0.07,0.04,0,0,0,0,,,0.02,0,0,0,0,0,0.06,0,0,0,0.02,0,,0,,,Csdc2,"RNA-binding protein pippin"
|
5
|
+
105866,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Krt72,"keratin 72"
|
6
|
+
105887,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Ugt3a1,"UDP glycosyltransferases 3 family, polypeptide"
|
7
|
+
105892,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0.05,0.06,0,0,0,0,0,0,0,,0,,,9030619P08Rik,"RIKEN cDNA 9030619P08"
|
8
|
+
105988,10.04,4.09,3.6,2.36,4.03,6.46,2.26,6.26,3.35,3.97,,,7.91,6.25,5.11,5.51,4.87,3.38,2.31,3.94,8.27,3.64,8.49,4.33,,3.07,,,Espl1,"extra spindle poles-like 1,extra spindle poles-like 1,"
|
9
|
+
106014,0,0,0,0.07,0,0.04,0,0,0,0,,,0,0,0,0,0,0.05,0,0.04,0,0.04,0,0.04,,0,,,AW049604,"TAFA5 protein"
|
10
|
+
106021,16.25,17.89,14.53,14.31,11.24,18.06,8.76,17.98,15.71,17.12,,,17.62,16.37,16.27,14.73,18.63,10.76,17.63,16.64,18.54,19.15,20.07,21.54,,11.42,,,Topors,"topoisomerase 1-binding RING finger"
|
11
|
+
106025,17.34,32.29,34.65,32.94,29.62,25.76,26.04,22.93,28.84,24.83,,,23.56,29.42,25.75,32.36,28.46,33.97,24.72,26.95,27.29,26.28,24.56,26.48,,31.46,,,Sharpin,"SHANK-associated RH domain interacting protein"
|
12
|
+
106039,44.57,40.92,33.58,37,43.32,43.41,34.74,44.54,50.29,48,,,42.12,43.53,38.36,42.62,44.6,38.25,46.03,41.58,39.23,46.83,35.57,45.47,,37.77,,,Gga1,"golgi associated, gamma adaptin ear containing,"
|
13
|
+
106042,0,0.07,0,0,0,0,0,0,0.05,0.01,,,0,0.03,0,0,0.02,0.02,0.02,0,0.05,0.05,0.01,0.04,,0,,,Prickle1,"prickle like 1,prickle like 1,"
|
14
|
+
106052,2.99,4.46,5.69,5.97,5.07,3.54,7.62,3.78,4.75,3.21,,,4.2,3.5,4.92,4.37,3.37,5.35,4.2,3.43,3.3,3.99,3.91,2.88,,5.5,,,Fbxo4,"F-box protein 4"
|
15
|
+
106064,6.34,7.26,4.21,8.28,5.07,6.71,6.5,6.94,11.28,11.96,,,6.98,8.72,6.39,8.14,8.56,4.58,9.06,8.46,7.23,9.58,7.89,7.25,,5.41,,,AW549877,"hypothetical protein LOC106064,hypothetical protein LOC106064,"
|
16
|
+
106068,9.65,6.98,5.38,4.19,4.04,10.21,3.67,6.8,5.08,5.68,,,7.19,7.91,8.05,4.08,8.86,2.48,4.78,6.67,7.69,5.6,7.86,7.25,,3.69,,,Slc45a4,"solute carrier family 45, member 4,solute carrier family 45, member 4,solute carrier family 45, member 4,"
|
17
|
+
106073,79.34,71.02,75.82,88.43,75.67,60.73,86.58,73.15,73.54,72.4,,,64.14,61.04,72.67,54.4,70.42,73.83,81.7,62.48,64.28,72.42,53.01,62.02,,86.98,,,D15Mgi27,"hypothetical protein LOC106073"
|
18
|
+
106143,30.3,31.47,26.64,31.96,18.2,29.9,27.82,29.14,24.1,30.87,,,31.93,29.46,29.56,27.31,32.35,26.58,28.98,33.39,27.24,28.87,36.24,26.21,,30.48,,,Cggbp1,"CGG triplet repeat binding protein 1,CGG triplet repeat binding protein 1,"
|
19
|
+
106200,4.35,8.51,3.98,9.56,8.6,9.47,10.17,9.58,9.08,11.48,,,11.04,10.13,12.77,10.9,12.69,10.54,10.65,11.18,12.17,9.83,10.02,9.87,,10,,,Txndc11,"thioredoxin domain containing 11 isoform 1,thioredoxin domain containing 11 isoform 1,"
|
20
|
+
106205,3.38,5.31,4.9,4.16,5.14,6.74,3.34,5.12,6.18,7.39,,,4.9,6.88,4.5,7.24,5.18,2.15,4.75,5.18,6.02,3.95,4.75,6.36,,2.82,,,Zc3h7a,"zinc finger CCCH type containing 7"
|
21
|
+
106248,2.67,2.84,2.73,3.44,1.92,2.36,3.76,3.34,3.18,3.71,,,2.65,4.44,3.04,2.31,3.19,3,3.02,2.39,3.23,3.14,2.64,2.71,,4.56,,,Qtrtd1,"queuine tRNA-ribosyltransferase domain"
|
22
|
+
106298,26.04,23.15,25.35,26.91,20.5,23.4,22.14,24.66,21.79,26.12,,,24.73,24.21,25.12,21.61,24.83,22.53,21.65,21.56,21.11,22,22.93,22.15,,29.06,,,Rrn3,"RRN3 RNA polymerase I transcription factor"
|
23
|
+
106326,14.8,17.73,11.3,14.36,9.13,19.6,9.76,14.67,17.76,16.75,,,19.19,18.63,13.05,14.28,17.66,9.62,19.23,17.31,16.68,17.4,22.4,15.1,,11.55,,,Osbpl11,"oxysterol binding protein-like 11"
|
24
|
+
106338,3.05,6.3,3.34,4.74,4.18,5.18,6.11,7.11,4.54,5.92,,,5.35,6.23,6.48,4.55,6.3,3.45,5.61,6.65,5.09,6.54,5.18,7.29,,6.93,,,Nsun3,"NOL1/NOP2/Sun domain family 3"
|
25
|
+
106344,20.03,23.33,18.46,16.5,25.71,16.02,21.6,16.24,16.13,15.1,,,25.21,22.7,25.86,29.33,16.4,34.99,13.27,15.76,27.82,16.92,29.33,13.43,,26.06,,,Rfc4,"replication factor C (activator 1) 4"
|
26
|
+
106347,0.06,0,0,0,0.08,0,0,0,0,0,,,0,0,0,0.08,0,0,0,0.02,0,0,0,0,,0,,,Ildr1,"immunoglobulin-like domain containing receptor"
|
27
|
+
106369,0.01,0.36,0.12,0.27,0.35,0.25,0.08,0.37,0.3,0.26,,,0.24,0.3,0.18,0.56,0.29,0.39,0.4,0.25,0.13,0.13,0.44,0.16,,0.14,,,Ypel1,"yippee-like 1,yippee-like 1,"
|
28
|
+
106389,0,0.29,0,0.06,0.43,0.07,0.21,0.03,0,0.05,,,0.14,0.1,0,0,0,0.02,0.04,0.08,0,0.02,0,0,,0,,,Eaf2,"ELL associated factor 2"
|
29
|
+
106393,0.59,1.07,1.19,0.39,0.53,0.75,0.58,0.84,0.51,0.58,,,1.01,0.69,0.85,0.59,0.86,0.71,0.83,1,0.99,0.99,1.04,0.66,,0.79,,,Srl,"sarcalumenin,sarcalumenin,"
|
30
|
+
106407,0,0,0,0,0,0.04,0,0.07,0,0,,,0,0.11,0,0,0,0,0.05,0,0,0,0.09,0,,0,,,Osta,"organic solute transporter alpha"
|
31
|
+
106489,3.87,8.98,11.27,10.6,11.92,7.65,13.05,5.24,8.61,5.25,,,5.25,5.88,5.85,9.59,7.21,10.73,6.74,5.43,7.12,8.72,5.7,5.33,,9.98,,,n/a,n/a
|
32
|
+
106504,41.59,36.19,33.11,32.53,30.96,41.17,34.07,40.67,41.33,35.15,,,44.05,40.12,34.69,32.85,41.58,34.69,42.24,43.74,42.7,35.65,39.32,40.4,,33.61,,,Stk38,"serine/threonine kinase 38,serine/threonine kinase 38,"
|
33
|
+
106512,89.47,83.36,94.54,73.22,100.37,82.24,90.51,90.04,79.98,67.65,,,83.74,75.9,86.58,98.49,83.21,92.08,101.37,90.16,81.74,86.87,66.89,103.71,,70.63,,,Gpsm3,"G-protein signalling modulator 3 (AGS3-like, C."
|
34
|
+
106522,0,0.72,1.16,0.62,0.22,1.01,0.28,0.05,0.99,0.32,,,0.11,0.5,0.26,0.9,0.74,0.27,0.49,0.67,1.24,0.51,0.5,0.29,,0.55,,,AW548124,"hypothetical protein LOC106522"
|
35
|
+
106529,64.28,87.5,84.48,79.73,93.77,76.33,71.62,72.99,65.18,66.34,,,91.99,81.89,85.14,98.05,87.43,104.95,77.39,77.93,93.26,87.68,99.88,68.89,,85.15,,,Gpsn2,"glycoprotein, synaptic 2,glycoprotein, synaptic 2,"
|
36
|
+
106557,0.13,0.21,0,0.06,0.14,0,0.47,0.11,0,0.11,,,0.06,0.15,0.42,0.05,0,0.16,0,0.17,0,0.13,0.08,0.13,,0,,,Ldhal6b,"lactate dehydrogenase A-like 6B"
|
37
|
+
106564,6.8,8.23,8.28,9.86,9.72,5.61,12.34,6.45,7.01,5.28,,,7.09,4.93,6.44,12.44,6.08,13.03,7.8,6.17,7.48,6.57,5.71,4.83,,9.46,,,Ppcs,"phosphopantothenoylcysteine synthetase"
|
38
|
+
106565,0.11,0,0,0,0,0,0.18,0.06,0,0,,,0,0,0,0,0,0.04,0.09,0,0,0,0,0,,0,,,Dlk2,"EGF-like-domain, multiple 9,EGF-like-domain, multiple 9,EGF-like-domain, multiple 9,"
|
39
|
+
106572,6.5,13.62,8.95,10.9,7.21,10.67,6.61,8.61,8.82,9.53,,,12.19,7.48,8.28,4.84,9.9,4.29,8.79,8.58,10.15,11.17,15.56,9.07,,10.67,,,Rab31,Rab31-like
|
40
|
+
106581,45.11,48.54,58.42,44.17,37.05,61.54,34.68,48.63,59.61,45.17,,,51.32,46.28,46.99,43.44,59.67,46.85,61.59,60.45,54.22,56.27,53.85,50.35,,41.71,,,Itfg3,"integrin alpha FG-GAP repeat containing 3,integrin alpha FG-GAP repeat containing 3,"
|
41
|
+
106582,41.42,25.63,15.05,17.04,24.07,22.98,15.66,16.95,16.96,15.9,,,36.82,31.51,27.45,28.97,28.93,30.14,18.24,18.47,31.34,20.84,45.31,19.74,,21.92,,,Nrm,nurim
|
42
|
+
106585,4.46,3.99,3.92,2.83,4.53,5.66,2.15,4.43,8.07,6.77,,,4.13,6.32,2.57,7.13,4.55,3.06,7.57,6.05,5.74,4.07,3.22,7.18,,1.93,,,Ankrd12,"ankyrin repeat domain 12,ankyrin repeat domain 12,"
|
43
|
+
106628,19.69,23.29,19.28,20.98,23.54,18.84,21.78,19.01,21.75,22.82,,,18.06,18.56,20.48,17.77,17.81,18.67,23.68,19.87,17.15,20.99,20.24,20.89,,20.86,,,Trip10,"thyroid hormone receptor interactor 10,thyroid hormone receptor interactor 10,thyroid hormone receptor interactor 10,thyroid hormone receptor interactor 10,"
|
44
|
+
106633,4.19,3.65,4.08,2.62,2.33,4.95,2.27,5.14,3.32,4.11,,,6.58,4.92,3.01,2.77,4.14,3.17,3.24,4.22,5.42,4.06,6.45,4.46,,1.79,,,Ift140,"intraflagellar transport 140,intraflagellar transport 140,"
|
45
|
+
106639,1.92,3.78,1.78,2.57,2.62,1.84,1.67,1.4,1.83,1.79,,,2.5,2.59,1.8,1.07,2,2.32,2.62,2.65,2.06,2.77,3.81,2.25,,1.82,,,AI662250,"vimentin-type IF-associated coiled-coil protein"
|
46
|
+
106648,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0.02,0,0,0,0,0,,0,,,Cyp4f15,"cytochrome P450, family 4, subfamily f,,cytochrome P450, family 4, subfamily f,,"
|
47
|
+
106672,76.8,108.36,145.43,142.49,200.62,65.62,167.37,83.73,128.19,112.65,,,61.9,93.82,83.57,137.29,96.06,157.47,98.15,91.39,95.75,108.95,87.99,81.8,,182.62,,,AI413582,"hypothetical protein LOC106672"
|
48
|
+
106707,6.26,9.03,14.04,8.49,9.83,7.95,9.77,9.12,7.65,6.08,,,8.81,8.45,9.84,10.28,8.01,9.37,8.65,6.83,8.76,8.48,9.73,9.4,,7.72,,,Rpusd1,"RNA pseudouridylate synthase domain containing,RNA pseudouridylate synthase domain containing,"
|
49
|
+
106722,0,0,0.32,0,0,0,0,0,0.04,0,,,0.07,0,0,0.07,0,0.03,0,0,0,0,0,0,,0,,,AU023871,"hypothetical protein LOC106722"
|
50
|
+
106759,12.28,8.53,13.72,10.99,8.38,12.95,8.64,9.62,10.7,10.93,,,10.95,9.63,10.86,10.21,13.14,8.29,12.97,12.36,10.38,12.11,7.34,10.86,,9.97,,,Ticam1,"TICAM-1,TICAM-1,"
|
51
|
+
106766,0,0.33,0.51,0.04,0.4,0.1,0.1,0.12,0.18,0.03,,,0.05,0.03,0.11,0.44,0.04,0.12,0.03,0.08,0.03,0.19,0.16,0.05,,0,,,Stap2,"signal transducing adaptor family member 2"
|
52
|
+
106794,1.79,2.23,1.45,1.68,2,2.85,1.82,3.25,3.21,2.99,,,3.94,2.92,2.46,2.13,2.95,1.79,3.54,2.95,3.45,2.23,2.4,2.94,,1.16,,,Dhx57,"DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57,DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57,DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57,"
|
53
|
+
106795,28.25,16.51,10.52,6.52,14.52,14.99,3.52,9.16,6.31,9.37,,,16.39,14.85,22.57,13.28,10.87,18.32,6.23,9.8,18.78,6.27,19.1,8.53,,10.42,,,Tcf19,"transcription factor 19,transcription factor 19,"
|
54
|
+
106821,15.07,20.94,9.85,12.15,21.54,9.12,19.94,11.32,14.56,18.03,,,19.79,18.25,10.78,21.2,15.79,18.96,15.07,13.13,20.88,10.68,12.76,14.86,,23.87,,,AI314976,"hypothetical protein LOC106821,hypothetical protein LOC106821,hypothetical protein LOC106821,"
|
55
|
+
106840,10.89,9.68,8.97,11.4,7.86,8.3,11.2,8.76,7.49,9.45,,,8.28,7.36,8.18,5.18,9.61,7.76,9.74,7.57,9.68,9.64,9.72,7.71,,10.13,,,Unc119b,"unc-119 homolog B"
|
56
|
+
106861,0.19,1.03,0.65,0.82,1.1,0.89,0.65,3.01,0.67,0.94,,,0.62,0.62,0.41,1.46,0.69,0.87,1.09,0.92,0.23,1.35,0.44,1.24,,1.68,,,Abhd3,"abhydrolase domain containing 3"
|
57
|
+
106869,28.94,60.85,53.52,51.88,30.83,39.34,48.37,31.26,39.08,45.18,,,39.57,57.14,60.3,54.41,42.59,47.74,55.54,42.52,54.17,48.28,61.27,40.72,,63.42,,,Tnfaip8,"tumor necrosis factor, alpha-induced protein 8"
|
58
|
+
106877,0.3,0.79,0.09,0.46,0.27,1.08,0,0.19,0.5,0.62,,,0.56,1.59,1.22,1.1,0.42,0.29,0.77,0.42,1.51,0.82,0.76,1.04,,0.32,,,Afap1l1,"actin filament associated protein 1-like 1"
|
59
|
+
106878,11.95,16.36,19.9,20.44,19.6,9.5,22.67,11.88,13.09,16.95,,,12.67,12.77,20.24,17.57,9.37,13.81,13.87,8.89,14.16,11.56,8.13,12.05,,22.02,,,2010002N04Rik,"putative small membrane protein NID67"
|
60
|
+
106894,8.03,7.12,9.67,6.38,5.27,9.23,4.61,8.44,8.64,9.6,,,7.36,9.6,6.66,7.87,8.21,5.6,9.54,8.98,8.37,8.9,6.78,10.07,,5.71,,,A630042L21Rik,"hypothetical protein LOC106894 isoform 2,hypothetical protein LOC106894 isoform 2,"
|
61
|
+
106931,0.58,1.16,0.39,0.68,0.55,0.86,0.45,1.67,0.9,1,,,0.56,0.76,1.2,1.36,1.06,0.41,0.89,0.75,1.12,1.07,0.63,1.03,,0.42,,,Kctd1,"potassium channel tetramerisation domain,potassium channel tetramerisation domain,potassium channel tetramerisation domain,"
|
62
|
+
106947,19.18,19.01,18.57,22.37,18.92,16.1,17.22,16.98,16.66,16.34,,,18.11,15.76,18.53,17.53,19.21,16.94,20.03,15.82,15.79,19.76,17.03,17.92,,21.43,,,Slc39a3,"solute carrier family 39 (zinc transporter),,solute carrier family 39 (zinc transporter),,solute carrier family 39 (zinc transporter),,"
|
63
|
+
106952,16.71,15.74,10.1,7.31,11.9,14.25,7.24,19.18,11.75,10.82,,,20.26,16.17,18.98,9.52,14.03,8.91,14.96,16.66,18.5,14.61,14.59,16.24,,8.49,,,Centd3,"centaurin, delta 3,centaurin, delta 3,centaurin, delta 3,centaurin, delta 3,"
|
64
|
+
106957,39.27,41.28,49.16,54.75,29.67,41.57,43.08,46.61,35.99,48.06,,,38.76,40.92,40.04,31.02,44.58,29.27,42.45,38.93,33.17,45.1,42.97,42.8,,42.34,,,Slc39a6,"solute carrier family 39 (metal ion"
|
65
|
+
107022,8.21,5.47,4.6,6.24,5.92,4.36,3.51,6.85,8.91,3.84,,,7.55,6.71,7.06,4.54,7.62,5.35,6.38,8.04,5.09,5.04,6.7,7.05,,5.28,,,Gramd3,"GRAM domain containing 3,GRAM domain containing 3,GRAM domain containing 3,"
|
66
|
+
107029,38.85,36.9,26.62,37.39,39.71,26.15,36.25,35.15,30.39,25.39,,,49.12,39.94,36.15,30.88,36.52,43.8,31.46,36.2,33.31,26.91,50.4,25.3,,40.34,,,Me2,"malic enzyme 2, NAD(+)-dependent, mitochondrial"
|
67
|
+
107035,14.94,15.02,12.37,13.82,8.42,17.93,10.66,16.82,18.83,16.22,,,16.51,16.33,15.77,12.91,17.98,9.81,17.14,18.71,15.09,19.85,15.03,18.12,,11.89,,,Fbxo38,"MoKA,MoKA,"
|
68
|
+
107045,36.05,26.63,30.41,24.46,23.89,29.09,19.62,31.35,21.56,26.83,,,36.38,30.45,36.9,21.33,30.71,27.45,27.09,32.28,27.44,30.21,28.48,33.07,,24.78,,,Lars,"leucyl-tRNA synthetase"
|
69
|
+
107047,14.49,23.24,31.95,21.75,33.51,12.76,17.19,17.49,14.19,13.71,,,17.11,15.44,18.71,23.77,15.91,28.38,14.75,12.8,19.61,21.75,19.99,14.54,,26.34,,,Tnfsf5ip1,"Clast3 protein"
|
70
|
+
107065,0,0,0,0,0,0,0,0.03,0,0.02,,,0,0.03,0,0.01,0.03,0,0,0.04,0.03,0,0.02,0,,0,,,Lrrtm2,"leucine rich repeat transmembrane neuronal 2"
|
71
|
+
107071,26.85,44.77,56.42,48.85,64,31.86,54.87,36.22,37.58,39.35,,,31.75,37.06,43.5,50.18,30.33,50.69,39.78,32.39,33.7,38.26,32.47,38.05,,64.2,,,Wdr74,"WD repeat domain 74"
|
72
|
+
107094,13.24,12.73,14.12,11.65,9.71,12.9,11.36,11.91,10.28,15.93,,,11.34,12.68,12.97,8.31,11.63,7.16,9.93,9.87,9.57,11,9.55,12.51,,10.78,,,Rrp12,"ribosomal RNA processing 12 homolog"
|
73
|
+
107141,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Cyp2c50,"cytochrome P450, family 2, subfamily c,,cytochrome P450, family 2, subfamily c,,"
|
74
|
+
107146,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Glyat,glycine-N-acyltransferase
|
75
|
+
107173,10.97,15.44,15.06,17.16,19.72,10.14,19.85,7.87,15.34,12.65,,,12.38,12.85,13.62,15.91,11.69,20.1,14.34,9.53,12.93,15.32,13.15,11,,18.82,,,Gpr137,"expressed sequence AI428855"
|
76
|
+
107182,7.67,8.66,6.29,6.9,5.17,9.7,4.09,9.39,8.2,11.08,,,9.23,9.39,5.97,5.97,9.78,4.96,8.56,9.24,7.93,7.9,8.7,7.97,,5.23,,,Btaf1,"BTAF1 RNA polymerase II, B-TFIID transcription"
|
77
|
+
107221,0,0.14,0,0,0.23,0.22,0.48,0.19,0.07,0.05,,,0.06,0.04,0.2,0.11,0,0,0.26,0.17,0.05,0.18,0.08,0,,0.21,,,Gpr120,"G protein-coupled receptor 120"
|
78
|
+
107227,4.13,6.13,6.56,5.11,7.16,4.26,5.91,3.75,6.93,5.79,,,9.12,7.4,3.24,5.36,6.57,6.62,7.42,5.56,6.37,4.87,9.42,5.02,,6.34,,,Macrod1,"LRP16 protein"
|
79
|
+
107242,19.02,23.29,12.59,23.09,22.69,20.26,20.51,10.36,19.2,11.54,,,20.21,12.1,12.46,12.46,11.88,12.47,13.81,11.25,15.5,16.08,14.48,19.05,,16.77,,,AI837181,"basophilic leukemia expressed protein"
|
80
|
+
107250,0.27,0.25,0,0.6,1.39,0.32,1.25,0.17,0.15,0.44,,,0.09,0.59,0.31,0.48,0.14,0.93,0.48,0.34,0.45,0.26,0.43,0.53,,0.85,,,Kazald1,"Kazal-type serine peptidase inhibitor domain 1,Kazal-type serine peptidase inhibitor domain 1,"
|
81
|
+
107260,70.72,74.34,83.79,88.56,99.39,64.52,97.57,63.84,72.06,63.1,,,64.04,70.53,67.82,86.95,67.46,94.82,74.31,60.71,64.73,78.84,62.87,68.51,,93.68,,,Otub1,"otubain 1"
|
82
|
+
107271,36.54,32.87,28.27,29.47,26.35,30.2,22.77,33.22,23.8,24.63,,,42.52,35.94,39.57,28.18,29.08,34.2,27.7,25.8,33.16,27.29,31.16,31,,34.6,,,Yars,"tyrosyl-tRNA synthetase"
|
83
|
+
107272,51.98,36.97,23.83,36.85,30.11,32.32,29.39,33.2,17.88,23.38,,,51.23,51.35,50.47,38.88,31.3,57.75,20.95,29.46,54.92,25.24,65.64,23.24,,49.34,,,Psat1,"phosphoserine aminotransferase 1,phosphoserine aminotransferase 1,phosphoserine aminotransferase 1,"
|
84
|
+
107305,15.57,20.74,18.77,19.51,18.56,20.96,18.67,20.06,18.32,19.41,,,21.41,21.86,24.38,17.8,19.58,16.29,23.55,19.77,17.66,19.13,15.37,22.09,,17.39,,,Vps37c,"vacuolar protein sorting 37C,vacuolar protein sorting 37C,"
|
85
|
+
107321,232.51,289.34,284.53,332.03,281.9,225.35,357.17,278.82,268.17,205.42,,,259.8,261.06,266.56,343.26,264.4,298.62,273.6,258.54,219.75,301.23,250.61,217.75,,340.72,,,Lpxn,leupaxin
|
86
|
+
107328,0.92,0.75,0,1.42,2.36,1.15,1.16,1.34,0.76,0.84,,,1.02,0.87,1.21,1.45,0.81,0.79,1.05,1.23,1.23,1.18,1.56,0.67,,0.67,,,Trpt1,"tRNA splicing 2' phosphotransferase 1"
|
87
|
+
107338,10.01,9,9.03,6.97,7.51,11.71,6.45,11.18,9.98,11.41,,,12.17,10.67,9.19,7.04,11.15,5.52,10.09,11.96,11.44,9.44,10.09,11.28,,5.7,,,Gbf1,"golgi-specific brefeldin A-resistance factor 1,golgi-specific brefeldin A-resistance factor 1,golgi-specific brefeldin A-resistance factor 1,golgi-specific brefeldin A-resistance factor 1,"
|
88
|
+
107351,0.28,0,0,0.18,0,0,0.06,0.02,0,0.04,,,0.01,0.39,0.06,0.04,0.25,0.02,0.31,0.04,0.4,0,0.46,0,,0.03,,,Ankrd15,"ankyrin repeat domain 15,ankyrin repeat domain 15,ankyrin repeat domain 15,"
|
89
|
+
107358,59.93,61.44,51.96,55.84,38.41,44.12,41.75,54.93,41.28,49.58,,,59.54,45.9,54.89,41.99,52.97,45.49,52.4,51.82,53.4,56.25,68.12,47.51,,55.83,,,Tm9sf3,"transmembrane protein 9 superfamily member 3"
|
90
|
+
107368,8.56,7.45,6.24,6.15,5.78,8.16,4.29,9.08,7.3,7.69,,,10.67,6.95,7.02,5.21,9.53,5.69,6.61,9.32,7.94,7.37,8.31,8.41,,5.24,,,Pdzd8,"PDZ domain containing 8"
|
91
|
+
107371,14.63,15,11.89,11.09,10.27,14.02,9.76,13.66,12.74,13.51,,,14.06,13.33,16.44,11.27,12.64,10.11,13.7,13.43,14.84,13.45,13.62,14.65,,10.53,,,Exoc6,"exocyst complex component 6,exocyst complex component 6,"
|
92
|
+
107373,82.99,64.13,54.07,48.27,53.85,68.24,33.73,64.81,51.53,62.79,,,84.95,68.61,69.49,62.5,66.98,54.21,63.64,72.53,79.24,62.79,99.12,63.4,,43.54,,,4632417K18Rik,"hypothetical protein LOC107373"
|
93
|
+
107375,12.9,25.14,25.34,21.88,23.36,17.9,22.98,18.21,23.08,20.45,,,19.59,22.52,25.36,22.6,18.73,19.37,20.52,22.56,22.81,18.03,18.76,20.65,,26.35,,,Slc25a45,"solute carrier family 25, member 45,solute carrier family 25, member 45,"
|
94
|
+
107392,62.54,78.07,89.53,76.14,124.55,55.7,114.64,58.3,69.49,57.96,,,65.57,69.66,59.99,123.3,48.54,102.73,66.65,57.2,73.75,65.69,59.59,74.82,,90.45,,,Brms1,"breast cancer metastasis-suppressor 1"
|
95
|
+
107435,53.6,52.17,43.63,37.38,39.57,43.31,29.96,35.59,28.56,34.7,,,50.17,48.26,59.46,53.6,39.63,60.31,32.89,34.48,49.35,35.17,68.79,30.3,,53.05,,,Hat1,"histone aminotransferase 1,histone aminotransferase 1,"
|
96
|
+
107448,0.23,0.38,0.12,0.25,0.03,0.73,0.11,0.21,0.01,0.4,,,0.07,0.39,0,0.21,0.62,0,0.19,0.07,0.36,0.14,0.61,0.01,,0.23,,,Unc5a,"netrin receptor Unc5h1,netrin receptor Unc5h1,"
|
97
|
+
107449,0.23,0.36,0,0.31,0.23,0.44,0.52,0.5,0.35,0.39,,,0.76,0.27,0.16,0.35,0.25,0.23,0.42,0.27,0.28,0.45,0.39,0.35,,0.25,,,Unc5b,"unc-5 homolog B,unc-5 homolog B,unc-5 homolog B,"
|
98
|
+
107476,0.66,1.2,1.13,0.8,0.62,1.65,0.6,1.21,1.14,1.1,,,1.7,1.01,0.7,0.83,1.69,1.18,0.95,1.14,1.72,1.4,2.18,1.45,,0.45,,,Acaca,"acetyl-Coenzyme A carboxylase alpha"
|
99
|
+
107477,0.31,0.12,0.33,0.08,0,0.31,0,0.18,0.28,0.16,,,0.03,0.1,0,0.14,0.03,0,0.3,0.23,0.29,0.09,0.18,0.54,,0,,,Guca1b,"guanylate cyclase activator 1B"
|
100
|
+
107503,37.71,45.46,43.04,46.48,23.2,40.85,37.31,43.18,49.38,45.37,,,45.65,34,55.47,32.3,30.39,37.91,60.44,25.55,39.29,28.1,26.27,41.95,,48.12,,,Atf5,"ativating transcription factor 5,ativating transcription factor 5,"
|
101
|
+
107508,46.77,29.21,30.4,18.72,26.17,43.31,18.98,44.64,30.16,37.47,,,45.01,39.74,35.46,39.33,36,26.41,36.78,39.82,41.99,37.1,39.32,46.24,,16.84,,,Eprs,"glutamyl-prolyl-tRNA synthetase,glutamyl-prolyl-tRNA synthetase,glutamyl-prolyl-tRNA synthetase,"
|
102
|
+
107513,33.65,32.06,28,35.27,26.01,27.6,32.04,29.15,21.33,28.22,,,33.3,29.33,34.61,27.68,28.44,33.17,26.77,25.38,32.61,28.72,34.97,24.92,,37.94,,,Ssr1,"signal sequence receptor, alpha,signal sequence receptor, alpha,"
|
103
|
+
107515,0.16,0.17,0,0.15,0.29,0.04,0,0.19,0.1,0.17,,,0.22,0.18,0.17,0.07,0.13,0.25,0.11,0.07,0.22,0.08,0.05,0.17,,0.05,,,Lgr4,"G protein-coupled receptor 48"
|
104
|
+
107526,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Gimap4,"GTPase, IMAP family member 4 isoform b"
|
105
|
+
107527,0.38,0.12,0,0.28,0.51,0.19,0.09,0.65,0.03,0.61,,,0.1,0.31,0.27,0,0.14,0.21,0.34,0.49,0.06,0.43,0.72,0.6,,0.18,,,Il1rl2,"interleukin 1 receptor-like 2,interleukin 1 receptor-like 2,"
|
106
|
+
107528,3.23,3.56,2.12,3.12,3.4,3.79,1.97,3.04,3.76,3.43,,,3.51,3.72,4.5,2.55,4.7,2.68,2.48,4.62,4.05,3.56,4.76,3.75,,1.86,,,Magee1,"melanoma antigen, family E, 1"
|
107
|
+
107566,41.4,34.72,44,39.66,22.79,34.44,22.5,34.96,29.24,34.04,,,39.33,32.59,32.65,28.21,37.13,28.41,25.58,26.94,43.45,27.63,36.18,29.72,,43.8,,,Arl2bp,"ADP-ribosylation factor-like 2 binding protein"
|
108
|
+
107568,19.96,36.9,17.17,28.82,13.06,36.21,13.4,19.18,30.22,22.48,,,40.61,28.44,18.47,21.92,36.82,14.18,36.45,34.24,27.13,42.53,50.47,30.55,,16.21,,,Wwp1,"WW domain-containing protein 1"
|
109
|
+
107569,23.69,23.18,28.34,28.22,31.59,28.75,47.58,32.36,26.99,21.51,,,20.88,28.47,28.1,34,22.43,34.21,18.68,25.78,21.01,20.66,21.96,28.46,,39.6,,,Nt5c3,"5'-nucleotidase, cytosolic III,5'-nucleotidase, cytosolic III,"
|
110
|
+
107581,0,0,0,0,0,0,0,0.02,0,0,,,0,0,0,0,0,0,0,0.01,0,0,0,0,,0,,,Col16a1,"procollagen, type XVI, alpha 1,procollagen, type XVI, alpha 1,"
|
111
|
+
107585,0,0,0.23,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Dio3,"deiodinase, iodothyronine type III"
|
112
|
+
107586,0,0,0.24,0,0,0,0,0.08,0,0,,,0.05,0,0,0,0,0.06,0,0,0,0,0,0,,0,,,Ovol2,"ovo-like 2 isoform A"
|
113
|
+
107587,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Osr2,"odd-skipped related 2"
|
114
|
+
107589,0.3,0.12,0.25,0.03,0,0.18,0.01,0.16,0.22,0.11,,,0.15,0.07,0.36,0.04,0.17,0.1,0.11,0.16,0.35,0.09,0.08,0.02,,0.1,,,Mylk,"myosin, light polypeptide kinase,myosin, light polypeptide kinase,"
|
115
|
+
107605,0,0.09,0.02,0,0,0.03,0,0,0.03,0,,,0.03,0.01,0,0,0.02,0.05,0.03,0.01,0.03,0,0.01,0,,0,,,Rdh1,"retinol dehydrogenase 1 (all trans)"
|
116
|
+
107607,0.63,0.63,0.95,0.44,0.6,2.18,1.15,1.35,0.9,0.84,,,0.23,0.93,1.19,0.94,1.2,0.27,0.79,0.93,0.91,1.04,0.85,1.58,,0.51,,,Nod1,"nucleotide-binding oligomerization domain,nucleotide-binding oligomerization domain,"
|
117
|
+
107650,13.06,13.8,13.78,13.06,9.31,14.31,13.07,14.49,13.96,13.74,,,14.13,14.81,13.83,10.27,15.45,10.04,12.44,14.79,12.76,14,13.05,13.89,,13.54,,,Pi4kb,"phosphatidylinositol 4-kinase, catalytic, beta,phosphatidylinositol 4-kinase, catalytic, beta,phosphatidylinositol 4-kinase, catalytic, beta,"
|
118
|
+
107652,17.52,15.73,16.63,10.53,14.48,16.46,10.18,11.44,15.39,15.38,,,17.57,12.4,16.83,11.79,13.88,13.06,14.51,15.01,20.9,13.19,17.32,16.07,,11.19,,,Uap1,"UDP-N-acetylglucosamine pyrophosphorylase 1,UDP-N-acetylglucosamine pyrophosphorylase 1,UDP-N-acetylglucosamine pyrophosphorylase 1,UDP-N-acetylglucosamine pyrophosphorylase 1,"
|
119
|
+
107656,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Krt9,"keratin complex 1, acidic, gene 9"
|
120
|
+
107684,27.95,55.26,41.03,43.92,50.42,74.39,37.1,26.47,55.25,54.4,,,77.14,56.1,60.43,17.72,24.89,16.53,56.58,72.66,58.73,19.18,22.77,77.76,,38,,,Coro2a,"coronin, actin binding protein 2A,coronin, actin binding protein 2A,coronin, actin binding protein 2A,"
|
121
|
+
107686,48.89,71.74,97.33,92.77,158.47,57.48,103.34,55.04,65.8,57.03,,,64.72,77.63,72.58,120.35,53.39,140.21,60.03,54.13,92.64,68.83,71.46,61.42,,121.23,,,Snrpd2,"small nuclear ribonucleoprotein D2"
|
122
|
+
107701,16.73,18,20.46,18,14.91,16.13,18.87,20.77,18.21,18.24,,,17.99,18.71,19.3,17.69,18.99,18.02,20.9,19.82,18.21,21.44,18.89,20.17,,16.51,,,Sf3b4,"splicing factor 3b, subunit 4"
|
123
|
+
107702,851.76,1309.25,1796.85,1847.55,2280.84,872.11,3092.64,1295.64,1461.21,1235.63,,,923.1,1174.67,1108.1,1627.55,963.7,2095.88,1137.19,1022.39,1104.8,1260.3,886.81,1091.46,,2273.54,,,Rnh1,"ribonuclease/angiogenin inhibitor 1,ribonuclease/angiogenin inhibitor 1,ribonuclease/angiogenin inhibitor 1,"
|
124
|
+
107723,23.52,19.73,18.13,16.35,10.63,25.3,12.52,18.81,17.91,21.69,,,25.9,20.24,22.86,14.22,24.84,12.61,20.8,21.23,21.99,19.56,23.17,19.78,,12.39,,,Slc12a6,"solute carrier family 12, member 6 isoform 2,solute carrier family 12, member 6 isoform 2,solute carrier family 12, member 6 isoform 2,solute carrier family 12, member 6 isoform 2,"
|
125
|
+
107732,45.11,29.72,41.52,36.36,36.17,34.91,64.29,27.36,27.15,27.26,,,26.11,43.23,48.36,32.75,26.63,49.05,40.56,40.86,39.41,28.96,30.01,24.77,,43.25,,,Mrpl10,"mitochondrial ribosomal protein L10"
|
126
|
+
107733,5,9.35,13.7,8.95,14.47,5.99,11.39,4.64,8.58,7.46,,,6.95,7.49,7.01,15.83,4.94,16.7,6.01,6.24,8.44,5.96,7.09,5.22,,15.56,,,Mrpl41,"mitochondrial ribosomal protein L41"
|
127
|
+
107734,74.61,102.03,103.57,109.47,145.06,80.82,143.67,82.27,83.75,75.46,,,82.04,99,105.71,153.48,75.07,154.91,86,77.26,107.29,100.13,96.43,87.81,,152.4,,,Mrpl30,"mitochondrial ribosomal protein L30"
|
128
|
+
107746,38.1,26.38,28.84,24.3,23.3,32.95,16.88,34.5,31.85,38.26,,,32.48,32.75,25.55,23.34,33.52,20.12,31.62,32.35,31.34,29.88,31.33,35.78,,17.49,,,Rapgef1,"Rap guanine nucleotide exchange factor (GEF) 1"
|
129
|
+
107747,4.12,7.84,3.39,5.97,3,10.06,6.12,5.32,4.22,3.02,,,7.98,8.49,2.79,5.66,8.16,4.19,9.15,7.89,6.08,7.26,11.71,6.1,,3.27,,,Aldh1l1,"aldehyde dehydrogenase 1 family, member L1,aldehyde dehydrogenase 1 family, member L1,"
|
130
|
+
107751,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Prrxl1,"paired related homeobox protein-like 1"
|
131
|
+
107753,0,0,0,0,0,0,0,0.18,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Lgals2,"lectin, galactose-binding, soluble 2"
|
132
|
+
107765,0,0,0,0,0,0,0,0,0,0,,,0,0,0.13,0,0,0.04,0,0,0,0,0,0,,0,,,Ankrd1,"ankyrin repeat domain 1 (cardiac muscle)"
|
133
|
+
107766,7.19,5.4,5.93,5.69,3.03,3.36,3.57,7.96,2.24,0.71,,,9.23,3.17,10.76,8.16,1.29,5.46,5.13,2.74,4.66,3.2,4.49,1.15,,3.6,,,Haao,"3-hydroxyanthranilate 3,4-dioxygenase,3-hydroxyanthranilate 3,4-dioxygenase,"
|
134
|
+
107767,8.46,12.72,8.97,10.61,6.76,9.78,7.75,12.17,12.9,13.5,,,8.97,12.28,11.64,9.54,15.28,11.35,11.54,15.71,10.96,14.35,17.37,9.08,,13.22,,,Scamp1,"secretory carrier membrane protein 1,secretory carrier membrane protein 1,secretory carrier membrane protein 1,"
|
135
|
+
107769,68.27,73.29,64.75,56.09,56.8,62.83,38.94,39.58,47.54,47.93,,,77.88,63.2,94.55,50.67,57.39,52.09,51.02,51.84,74.89,47.55,82.24,43.16,,63.41,,,Tm6sf1,"transmembrane 6 superfamily member 1,transmembrane 6 superfamily member 1,transmembrane 6 superfamily member 1,"
|
136
|
+
107770,0,0,0,0.08,0,0,0,0,0.08,0,,,0,0.03,0,0,0,0,0.06,0,0,0,0.16,0,,0,,,Tm6sf2,"transmembrane 6 superfamily member 2,transmembrane 6 superfamily member 2,"
|
137
|
+
107771,15.59,20.2,22.49,19.06,20.11,17.16,15.53,12.45,15.09,14.33,,,23.27,20.33,13.57,21.88,21.56,21.87,20.63,14.6,19.15,19.28,19.44,12.57,,19.17,,,Bmyc,"brain expressed myelocytomatosis oncogene"
|
138
|
+
107815,0.12,0.2,0.13,0.07,0.2,0.1,0,0.07,0.05,0.07,,,0.05,0.2,0.18,0,0.17,0.06,0.09,0.04,0.1,0.04,0.16,0.12,,0,,,Scml2,"sex comb on midleg-like 2,sex comb on midleg-like 2,sex comb on midleg-like 2,"
|
139
|
+
107817,12.05,20.4,20.12,16.67,24.68,14.12,22.24,15.64,15.13,18.03,,,14.12,17.73,15.64,19.71,16.58,17.6,16.09,13.24,18.14,13.01,16.72,19.82,,23.33,,,Jmjd6,"jumonji domain containing 6"
|
140
|
+
107823,35.4,28.25,19.38,15.23,21.49,32.73,11.49,38.13,22.34,29.56,,,34.63,29.41,33.86,29.59,38.05,17.14,24.35,30.17,39.18,24,43.69,39.35,,17.59,,,Whsc1,"Wolf-Hirschhorn syndrome candidate 1,Wolf-Hirschhorn syndrome candidate 1,Wolf-Hirschhorn syndrome candidate 1,"
|
141
|
+
107829,28.83,34.35,36.57,32.68,34.41,30.28,33.32,36.88,33.24,36.42,,,33.71,30.97,35.65,33.09,30.61,29.66,37.71,29.05,29.84,33.21,29.11,37.25,,37.02,,,Thoc5,"THO complex 5"
|
142
|
+
107831,0,0,0,0,0,0,0.1,0,0,0,,,0,0,0.01,0,0,0,0,0,0,0,0,0,,0,,,Bai1,"brain-specific angiogenesis inhibitor 1,brain-specific angiogenesis inhibitor 1,brain-specific angiogenesis inhibitor 1,brain-specific angiogenesis inhibitor 1,brain-specific angiogenesis inhibitor 1,"
|
143
|
+
107849,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Prl2c5,"prolactin family 2, subfamily c, member 5"
|
144
|
+
107868,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0.01,0,0,0,0,0,0,0,,0,,,Usp9y,"ubiquitin specific peptidase 9, Y chromosome"
|
145
|
+
107869,0.43,0.15,0.16,0.22,0.04,0.11,0.04,0.21,0.29,0.21,,,0.23,0.16,0.25,0.75,0.03,0.24,0.16,0.36,0.07,0.19,0.1,0.34,,0.08,,,Cth,cystathionase
|
146
|
+
107885,3.5,8.13,5.3,8.2,6.83,5.43,12.75,6.85,7.54,7.48,,,3.74,5.94,5.95,12.07,6.16,12.87,5.15,6.79,11.14,5.95,6.49,3.19,,13.19,,,Mthfs,"5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,5, 10-methenyltetrahydrofolate synthetase,"
|
147
|
+
107889,0,0,0,0.03,0,0,0,0.48,0,0.16,,,0,0.06,0,0,0,0,0.13,0,0.42,0,0,0,,0.04,,,Gcm2,"glial cells missing homolog 2,glial cells missing homolog 2,"
|
148
|
+
107895,6.92,8.68,5.26,5.69,2.24,12.1,1.95,7.95,4.87,9.29,,,8.42,7.88,6.13,1.29,8.15,0.64,6.38,6.91,6.96,8.01,10.45,6.41,,3.38,,,Mgat5,"mannoside acetylglucosaminyltransferase 5,mannoside acetylglucosaminyltransferase 5,mannoside acetylglucosaminyltransferase 5,mannoside acetylglucosaminyltransferase 5,"
|
149
|
+
107932,68.86,39.62,37.57,25.63,36.4,67.73,19.13,55.81,53.49,55.17,,,54.93,53.21,35.38,37.38,54.74,25.07,50.07,60.51,55.64,42.67,54.61,67.82,,19.65,,,Chd4,"chromodomain helicase DNA binding protein 4,chromodomain helicase DNA binding protein 4,"
|
150
|
+
107934,0.09,0.22,0,0.16,0.09,0.24,0.15,0.13,0.34,0.31,,,0.08,0.12,0.07,0.11,0.17,0.06,0.4,0.2,0.15,0.15,0.11,0.21,,0.17,,,Celsr3,"cadherin EGF LAG seven-pass G-type receptor 3,cadherin EGF LAG seven-pass G-type receptor 3,"
|
151
|
+
107939,12.56,8.44,9.9,7.71,6.16,10.2,5.48,9.56,8.96,11.05,,,9.64,9.57,9.29,7.23,10.15,8.34,9.62,9.09,10.67,9.01,9.56,10.32,,6.27,,,Pom121,"nuclear pore membrane protein 121"
|
152
|
+
107951,22.44,24.43,23.47,27.36,26.21,24.11,22.54,24.2,26.52,23.09,,,22.85,24.42,23.97,22.24,23.78,23.03,26.96,23.22,23.97,26.24,23.2,25.18,,24.5,,,Cdk9,"cyclin-dependent kinase 9,cyclin-dependent kinase 9,"
|
153
|
+
107970,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0.1,,0,,,Hist1h1t,"histone 1, H1t"
|
154
|
+
107971,0.19,0.52,0.04,0.14,0.13,0.18,0.36,0.32,0.42,0.38,,,0.36,0.25,0.18,0.32,0.37,0.34,0.56,0.51,0.29,0.23,0.44,0.36,,0.12,,,Frs3,"fibroblast growth factor receptor substrate 3"
|
155
|
+
107975,10.53,8.93,7,6.46,8.34,10.76,5.28,9.15,10.59,9.73,,,10.49,8.86,10.72,7.94,11.52,6.18,10.35,9.46,12.59,9.2,9.7,9.96,,6.8,,,Pacs1,"phosphofurin acidic cluster sorting protein 1,phosphofurin acidic cluster sorting protein 1,phosphofurin acidic cluster sorting protein 1,"
|
156
|
+
107976,46.57,49.12,46.51,53.31,37.92,37.89,44.62,51.34,49.77,44.76,,,52.65,44.26,48.63,45.63,44.67,46.59,52.25,43.24,41.74,52.35,44.02,40.19,,47.33,,,Bre,"brain and reproductive organ-expressed protein,brain and reproductive organ-expressed protein,"
|
157
|
+
107986,4.06,6.19,8.37,4.97,7.59,5.57,6.55,5.92,7.51,8.25,,,5.92,8.03,8.14,6.17,7.54,7.41,8.65,10.63,7.99,7.05,7.09,8.77,,5.81,,,Ddb2,"damage specific DNA binding protein 2"
|
158
|
+
107993,0,0,0,0,0,0.15,0,0,0,0,,,0,0,0,0,0.07,0,0.09,0,0,0,0,0,,0,,,Bfsp2,"beaded filament structural protein 2, phakinin,beaded filament structural protein 2, phakinin,"
|
159
|
+
107995,33.87,23.45,22.11,14.24,28.14,21.59,14.24,20.9,13.97,14.63,,,32.76,20.88,20.99,24.35,16.92,37.32,9.61,13.49,32.1,16.51,35.33,17.66,,22.46,,,Cdc20,"cell division cycle 20 homolog,cell division cycle 20 homolog,"
|
160
|
+
107999,7.8,8.77,14.04,9.06,15.47,8.14,11.72,8.85,10.12,9.77,,,8.57,8.02,7.88,12.41,8.87,10,6.69,7.36,6.51,7.87,7.4,9.06,,7.59,,,Gtpbp6,"GTP binding protein 6 (putative)"
|
161
|
+
108000,5.91,2.02,2.22,0.74,2.58,5.1,0.66,3.34,2.3,2.64,,,4.27,4.35,1.83,3.79,2.96,2.23,1.42,3.09,6.11,1.39,4.11,4.57,,0.85,,,Cenpf,"centromere protein F,centromere protein F,centromere protein F,"
|
162
|
+
108011,5.34,4.12,4.44,3.55,3.58,4.39,2.84,4.45,4.01,5.11,,,4.73,4.24,3.87,2.98,5.37,2.41,4.04,4.47,4.11,4.57,5.03,4.36,,3.31,,,Ap4e1,"adaptor-related protein complex AP-4, epsilon 1,adaptor-related protein complex AP-4, epsilon 1,"
|
163
|
+
108012,28.23,26.23,22.22,20.51,17.96,18.81,19.03,24.82,19.52,22.54,,,27.15,20.47,26.06,20.07,25.28,22.78,22.93,25.13,21.2,25.08,27.79,18.49,,26.87,,,Ap1s2,"adaptor-related protein complex 1 sigma 2,adaptor-related protein complex 1 sigma 2,"
|
164
|
+
108013,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Brunol4,"bruno-like 4, RNA binding protein,bruno-like 4, RNA binding protein,bruno-like 4, RNA binding protein,bruno-like 4, RNA binding protein,"
|
165
|
+
108014,100.69,101.93,105.5,109.9,130.89,83.6,111.39,81.92,79.94,79.12,,,91.22,91.55,91.37,87.69,81.14,108.72,89.96,79.06,92.06,96.63,85.77,87.76,,116.24,,,Sfrs9,"splicing factor, arginine/serine rich 9"
|
166
|
+
108015,0,0.02,0,0,0,0.03,0,0,0,0,,,0,0,0,0,0,0,0,0,0.02,0,0,0,,0,,,Chrnb4,"cholinergic receptor, nicotinic, beta,cholinergic receptor, nicotinic, beta,"
|
167
|
+
108017,0,0,0,0.19,0,0,0,0,0,0,,,0,0.23,0,0,0,0,0,0,0,0.21,0.36,0,,0,,,Fxyd4,"corticosteroid-induced protein,corticosteroid-induced protein,"
|
168
|
+
108030,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0.01,0,0,0,0,0,,0,,,Lin7a,"lin 7 homolog a isoform 1"
|
169
|
+
108037,62.38,51.55,46.35,39.14,50.64,42.91,37,45.36,30.4,32.45,,,75.21,62.49,59.58,49.62,41.73,71.62,34.45,37.47,56.26,35.83,58.48,35.02,,51.99,,,Shmt2,"serine hydroxymethyltransferase 2,serine hydroxymethyltransferase 2,"
|
170
|
+
108043,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Chrnb3,"cholinergic receptor, nicotinic, beta"
|
171
|
+
108052,0.09,0,0,0,0,0.03,0,0,0,0.02,,,0.08,0.02,0.22,0,0.11,0.03,0,0.02,0.02,0.06,0,0,,0.03,,,Slc14a1,"solute carrier family 14 (urea transporter),,solute carrier family 14 (urea transporter),,"
|
172
|
+
108058,30.93,29.46,24.42,31.01,16,22.82,20.95,28.6,27.57,27.23,,,30.82,22.94,22,25.12,30.28,20.23,28.02,24.73,25.38,32.4,33.07,24.28,,25.72,,,Camk2d,"calcium/calmodulin-dependent protein kinase II,,calcium/calmodulin-dependent protein kinase II,,calcium/calmodulin-dependent protein kinase II,,"
|
173
|
+
108062,21.36,18.99,13.15,13.71,10.64,16.3,12.83,18.5,11.7,13,,,20.11,17.5,17.05,14.24,17.08,15.01,16.46,18.97,14.55,19.87,21.63,17.25,,13.34,,,Cstf2,"cleavage stimulation factor, 3' pre-RNA subunit,cleavage stimulation factor, 3' pre-RNA subunit,cleavage stimulation factor, 3' pre-RNA subunit,"
|
174
|
+
108067,17.7,13.08,17.22,19.94,16.88,12.39,19.06,14.03,14.54,13.35,,,16.09,16.08,16.53,12.56,11.65,13.49,14.46,12.51,10.4,15.22,11.93,16.24,,17.63,,,Eif2b3,"eukaryotic translation initiation factor 2B,"
|
175
|
+
108069,0,0,0.09,0,0,0,0,0,0,0,,,0,0.02,0.02,0,0,0,0,0,0,0,0,0,,0,,,Grm3,"glutamate receptor, metabotropic 3"
|
176
|
+
108071,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Grm5,"glutamate receptor, metabotropic 5,glutamate receptor, metabotropic 5,"
|
177
|
+
108072,0,0,0,0,0,0,0.07,0,0,0,,,0,0,0.04,0,0,0.01,0,0,0,0,0,0,,0,,,Grm6,"glutamate receptor, metabotropic 6,glutamate receptor, metabotropic 6,"
|
178
|
+
108073,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Grm7,"glutamate receptor, metabotropic 7"
|
179
|
+
108075,0,0,0.14,0,0,0.03,0,0.03,0.02,0,,,0,0.01,0,0,0.03,0,0.07,0.06,0.02,0.01,0,0,,0,,,Ltbp4,"latent transforming growth factor beta binding,latent transforming growth factor beta binding,latent transforming growth factor beta binding,"
|
180
|
+
108077,23.95,21.63,19.2,16.16,18.45,22.35,14.59,18.34,20.98,18.22,,,27.35,22.26,19.83,21.73,23.18,12.97,18.87,18.57,23.94,20.71,22.9,20.81,,16.63,,,Skiv2l,"superkiller viralicidic activity 2-like"
|
181
|
+
108078,0.11,0,0,0.05,0.06,0,0.04,0.02,0.03,0.11,,,0,0.03,0.05,0,0,0.04,0,0,0,0.01,0,0.19,,0.18,,,Olr1,"oxidized low density lipoprotein (lectin-like)"
|
182
|
+
108079,0,0.02,0,0.03,0,0.05,0,0.04,0.02,0,,,0.02,0.01,0.05,0,0.02,0.01,0.02,0,0,0.1,0.03,0,,0,,,Prkaa2,"AMP-activated protein kinase alpha 2 catalytic"
|
183
|
+
108083,27.67,22.44,16.81,16.46,14.63,26.94,11.78,22.85,21.41,22.27,,,26.37,22.31,20.58,19.11,25.74,13.65,23.44,22.38,24.77,21.86,23.7,25.09,,16.53,,,Pip4k2b,"phosphatidylinositol-5-phosphate 4-kinase, type"
|
184
|
+
108086,12.1,9.79,10.76,8.95,8.9,12.62,7.72,12.47,12.26,12.94,,,13.21,12.15,9.73,9.08,14.27,8.47,13.56,13.01,11.79,11.93,11.9,13.13,,7.86,,,Rnf216,"ubiquitin conjugating enzyme 7 interacting,ubiquitin conjugating enzyme 7 interacting,"
|
185
|
+
108089,0.2,0.15,0.11,0.12,0.16,0.22,0.26,0.36,0.11,0.14,,,0.3,0.2,0.16,0.07,0.28,0.18,0.13,0.12,0.24,0.39,0.21,0.13,,0.06,,,Rnf144a,"ring finger protein 144"
|
186
|
+
108096,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Slco1a5,"solute carrier organic anion transporter family,,solute carrier organic anion transporter family,,"
|
187
|
+
108097,0.47,1.13,0.59,0.71,1.32,0.92,0.8,1.08,1.4,1.53,,,0.96,1.16,1.11,0.58,1.03,0.69,1.14,1.05,0.61,1.05,1.09,0.96,,0.53,,,Prkab2,"AMP-activated protein kinase beta 2"
|
188
|
+
108098,21.69,36.57,37.87,31.78,40.09,20.27,42.34,26.21,23.29,23.41,,,21.62,32.14,33.74,44.59,23.95,55.43,21.94,30.67,27.42,27.4,25.71,26.52,,41.27,,,Med21,"SRB7 (supressor of RNA polymerase B) homolog"
|
189
|
+
108099,5.69,6.22,7.55,5.88,6.21,6.94,4.14,6.12,6.43,7.82,,,8.21,6.56,4.9,6.17,6.83,8.56,6.61,6.23,5.99,6.34,7.75,6.85,,4.83,,,Prkag2,"AMP-activated protein kinase gamma2 subunit,AMP-activated protein kinase gamma2 subunit,"
|
190
|
+
108100,27.78,24.54,26.45,24.3,34.96,25.53,22.7,34.44,34.05,21.19,,,23.68,25.46,20.15,29.22,24.4,25.55,28.08,23.8,25.6,28.86,35.1,33.47,,20.41,,,Baiap2,"brain-specific angiogenesis inhibitor"
|
191
|
+
108101,111.73,135.65,126.88,109.88,125.27,130.48,103.01,117.32,115.46,102.84,,,143.98,121.03,147.52,108.44,136.17,113,125.35,129.52,131.44,114.41,119.52,121.59,,120.82,,,BC032204,"UNC-112 related protein 2,UNC-112 related protein 2,"
|
192
|
+
108105,0,0,0,0.03,0.05,0,0,0.07,0,0.03,,,0.04,0.01,0,0,0.01,0,0.02,0.02,0,0.01,0.01,0.01,,0,,,B3gnt5,"UDP-GlcNAc:betaGal,UDP-GlcNAc:betaGal,"
|
193
|
+
108112,8.34,6.27,9.13,7.46,9.66,11.17,4.77,10.69,12.57,11.19,,,9.19,11.8,8.96,12.45,10.32,9.31,13.03,12.59,12.31,7.84,9.15,11.07,,4.59,,,Eif4ebp3,"eukaryotic translation initiation factor 4E"
|
194
|
+
108114,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Slc22a7,"solute carrier family 22 member 7"
|
195
|
+
108115,40.45,25.93,23.54,23.09,24.07,44.34,24.4,35.73,48.13,24.05,,,27.48,21.82,18.13,37.28,38.95,48.3,27.23,26.07,28.84,23.74,39.92,44.59,,20.19,,,Slco4a1,"solute carrier organic anion transporter family,,solute carrier organic anion transporter family,,"
|
196
|
+
108116,0.27,1.77,3.32,0.24,1.85,2.19,0.66,4.46,0.87,1.26,,,2.62,2.38,3.54,1.3,0.67,0.46,0.47,1.99,2.41,2.05,1.08,0.57,,0.21,,,Slco3a1,"solute carrier organic anion transporter family,"
|
197
|
+
108121,5.77,9.98,10.5,11.73,15.28,7.62,9.41,8.69,8.04,8.16,,,7.96,9.98,9.94,12.83,9.24,13.76,8.88,9.09,9.15,7.51,10.6,9.47,,14.58,,,U2af1,"U2 small nuclear ribonucleoprotein auxiliary"
|
198
|
+
108123,25.45,19.76,15.17,17.97,14.28,18.34,17.89,21.32,16.74,22.25,,,24.4,24.4,25.07,19.21,23.18,17.48,19.62,23.39,18.91,19.21,18.53,22.37,,19.05,,,Napg,"N-ethylmaleimide sensitive fusion protein"
|
199
|
+
108124,53.68,63.85,65.5,71.03,61.34,47.22,57.34,63.63,68.43,67.81,,,51.47,61.59,64.86,58.04,61.05,69.34,58.63,58.54,55.39,60.19,51.05,56.36,,73.9,,,Napa,"N-ethylmaleimide sensitive fusion protein"
|
200
|
+
108138,7.53,10.38,9.27,11.76,9.89,7.69,7.67,8.04,8.82,8.02,,,9.68,7.61,7.84,8.97,8.45,12.82,9.47,8.57,8.12,9.06,7.9,7.73,,11.13,,,Xrcc4,"X-ray repair complementing defective repair in"
|
201
|
+
108143,70.97,81.83,67.97,78.94,104.31,64.6,72.56,70.36,57.41,59.05,,,79.27,80.32,83.99,92.18,52.04,111.08,88.19,67.06,62.49,107.57,83.36,63.58,,145.85,,,Taf9,"TAF9 RNA polymerase II, TATA box binding protein,TAF9 RNA polymerase II, TATA box binding protein,"
|
202
|
+
108147,31.65,47.66,49.08,49.95,40.59,33.74,38.2,41.17,33.33,39.82,,,40.34,36.94,46.67,30.77,36.92,29.85,35.42,34.45,36.57,43.07,45.87,36.43,,52.96,,,Atic,"5-aminoimidazole-4-carboxamide ribonucleotide,5-aminoimidazole-4-carboxamide ribonucleotide,"
|
203
|
+
108148,35.68,38.89,33.6,29.38,28.47,38.74,22.78,43.12,30.53,32.39,,,38.49,33.54,40.84,31.51,44.26,31.93,40.53,32.74,37.76,31.69,44.23,33.8,,34.44,,,Galnt2,UDP-N-acetyl-alpha-D-galactosamine:polypeptide
|
204
|
+
108150,35.76,28.13,19.47,26.09,20.38,34.58,16.33,47.52,19.15,25.1,,,38.92,28.74,27.14,26.49,33.24,19.99,29.88,34.81,28.27,36.68,39.32,38.29,,18.99,,,Galnt7,"UDP-N-acetyl-alpha-D-galactosamine: polypeptide"
|
205
|
+
108151,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Sema3d,"semaphorin 3D,semaphorin 3D,semaphorin 3D,"
|
206
|
+
108153,0.02,0,0,0,0,0,0,0,0,0.01,,,0,0.01,0.03,0,0.01,0,0,0,0.03,0,0.01,0,,0,,,Adamts7,"a disintegrin-like and metalloprotease,a disintegrin-like and metalloprotease,"
|
207
|
+
108154,0.3,0.03,0,0.02,0.23,0.02,0.11,0.11,0.12,0.05,,,0.03,0.09,0.05,0.01,0.1,0.02,0.02,0.06,0.23,0.01,0.03,0.05,,0,,,Adamts6,"a disintegrin-like and metalloprotease"
|
208
|
+
108155,18.09,20.16,13.7,15.06,11.01,19.71,9.14,15.81,20.65,17.43,,,23.27,19.61,13.23,17.68,20.62,13.44,16.37,19.43,22.44,17.49,21.63,15.7,,11.58,,,Ogt,"O-linked N-acetylglucosamine transferase,O-linked N-acetylglucosamine transferase,"
|
209
|
+
108156,21.76,22.29,25.76,16.91,16.78,21.95,12.09,21.61,17.41,23.01,,,25.95,23.07,22.61,18.22,23.72,20.81,22.18,20.1,23.65,21.87,30.34,21.52,,21.25,,,Mthfd1,"methylenetetrahydrofolate dehydrogenase 1"
|
210
|
+
108159,11.91,10.41,9.35,8.55,13.55,6.16,9.81,11.43,5.96,7.11,,,12.49,11.66,9.06,11.03,6.8,15.82,7.37,11.13,12.23,12.25,9,10.13,,10.28,,,Ubxd6,"UBX domain containing 6"
|
211
|
+
108160,56.81,56.46,51.19,53.2,58.07,51.11,53.14,54.41,63.6,73.5,,,47.72,55.1,50.63,61.36,45.59,50.08,66.04,51.07,52.57,56.14,41.45,64.67,,59.42,,,D0HXS9928E,"DNA segment, human DXS9928E"
|
212
|
+
108645,31.96,45.42,44.07,49.61,50.05,30.66,58.68,37.41,37.26,33.87,,,35.88,38.54,35.15,57.21,38.21,55.74,35.81,36.55,40.65,39.59,38.35,31.91,,54.2,,,Mat2b,"methionine adenosyltransferase II, beta,methionine adenosyltransferase II, beta,"
|
213
|
+
108652,4.52,7.95,13.04,6.15,9.75,6,15.33,5.9,6.05,6.52,,,7.02,7.91,7.89,12.85,6.96,10.45,7.95,6.39,6.72,6.47,7,5.6,,10.39,,,Slc35b3,"solute carrier family 35, member B3,solute carrier family 35, member B3,"
|
214
|
+
108653,0,0,0.09,0,0,0,0,0.04,0,0,,,0,0,0.01,0,0,0.02,0,0,0,0,0,0,,0,,,4933426K21Rik,"hypothetical protein LOC108653,hypothetical protein LOC108653,"
|
215
|
+
108654,4.52,4.41,3.99,4.31,2.7,3.76,3.05,4.2,3.57,4.2,,,5.1,3.89,3.32,2.43,4.32,3.64,3.68,4.61,3.94,3.69,5.46,3.73,,3.36,,,4933403F05Rik,"hypothetical protein LOC108654"
|
216
|
+
108655,18.75,19.71,19,12.57,14.77,23.35,10.63,21.7,25.72,20.43,,,25.11,21.88,19.02,19.43,24.6,15.17,20.04,20.8,24.25,19.13,26.8,20.76,,10.13,,,Foxp1,"forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,forkhead box P1,"
|
217
|
+
108657,20.1,16.32,15.6,14.53,12.91,19.09,13.48,19.39,17.64,18.81,,,21.61,17.56,16.46,12.87,19.48,12.09,19.31,18.05,17.85,18.48,16.72,19.22,,12.24,,,Rnpepl1,"arginyl aminopeptidase (aminopeptidase B)-like"
|
218
|
+
108664,87.01,120.6,113.05,133.28,73.64,83.33,126.73,96.89,99.79,104.67,,,93.45,87.04,101.7,95.08,88.22,104.26,104.64,89.4,85.64,116,103.01,89.33,,130.92,,,Atp6v1h,"ATPase, H+ transporting, lysosomal V1 subunit H"
|
219
|
+
108670,57.59,86.82,76.66,42.08,80.77,101.3,104.17,116.64,92.08,50.49,,,78.06,49.68,66.77,109.24,74.93,57.88,38.11,41.22,86.06,93.86,15.36,57.26,,54.28,,,Epsti1,"epithelial stromal interaction 1 isoform a"
|
220
|
+
108671,35.18,30.85,23.76,22.31,30.06,27.92,21.18,23,21.35,18.92,,,35.05,33.24,30.53,34.19,24.93,37.43,20.76,23.46,39.39,21.25,42.8,23.54,,26.4,,,Dnajc9,"DnaJ homolog, subfamily C, member 9"
|
221
|
+
108672,0.24,0.18,0.83,0.23,0.03,0.2,0.33,0.48,0.32,0.16,,,0.42,0.22,0.31,0.26,0.32,0.26,0.26,0.27,0.38,0.52,0.31,0.21,,0.67,,,Zdhhc15,"zinc finger, DHHC domain containing 15"
|
222
|
+
108673,19.65,17.58,22.36,20.23,19.24,24.51,23.63,27.27,17.05,22.95,,,15.65,25.48,21.12,23.88,19.75,20.33,24.61,20.6,18.51,24.18,10.64,26.5,,21.01,,,Ccdc86,"coiled-coil domain containing 86"
|
223
|
+
108679,39.49,46.77,39.56,58.02,54.29,33.78,69.42,37.14,40.55,46.07,,,41.67,44.55,46.57,48.51,43.16,58.85,43.43,39.86,36.15,42.62,42.71,39.3,,70.81,,,Cops8,"COP9 signalosome subunit 8"
|
224
|
+
108682,4.81,6,5,4.54,3.04,6.88,5.1,4.62,5.43,5.25,,,5.95,7.27,6.2,4.78,5.37,4.16,5.67,5,5.11,4.57,7.13,4.14,,5.63,,,Gpt2,"glutamic pyruvate transaminase (alanine,glutamic pyruvate transaminase (alanine,glutamic pyruvate transaminase (alanine,"
|
225
|
+
108686,4.65,2.48,2.96,1.38,3.12,5.21,1.03,4.7,3.29,4.15,,,4.49,5,2.11,4.4,3.67,2.05,3.97,5.82,4.02,3.03,4.42,5.58,,1.13,,,Ccdc88a,"coiled coil domain containing 88A"
|
226
|
+
108687,10.57,16.3,17.44,20.02,14.37,19,22.33,19.8,18.95,19.69,,,16.88,16.5,18.83,14.44,19.23,17.11,16.99,15.95,17.63,18.9,14.56,16.12,,22.3,,,Edem2,"putative alpha-mannosidase"
|
227
|
+
108689,13.47,14.57,13.92,12.54,14.28,12.69,13.49,13.73,12.29,12.43,,,14.7,13.27,14.63,10.75,11.89,13.47,11.12,11.75,12.66,12.9,18.13,13.19,,12.04,,,Obfc1,"oligonucleotide/oligosaccharide-binding fold,oligonucleotide/oligosaccharide-binding fold,"
|
228
|
+
108699,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0.09,0,0.16,0.28,0,0,0,,0,,,Chn1,"chimerin (chimaerin) 1 isoform 1,chimerin (chimaerin) 1 isoform 1,"
|
229
|
+
108705,47.85,69.93,68.89,74.15,54.06,50.99,67.2,67.09,68.52,64.1,,,61.22,57.54,63.47,63.94,68.57,63.98,72,58.82,56.28,71.68,68.19,61.9,,78.47,,,Pttg1ip,"pituitary tumor-transforming gene 1"
|
230
|
+
108707,5.19,3.5,5.77,3.63,3.32,4.2,3,4.42,2.63,3.39,,,4.37,3.26,3.97,3.58,2.91,2.86,3.24,2.73,3.07,4.49,2.96,3.31,,4.12,,,1810008A18Rik,"hypothetical protein LOC108707,hypothetical protein LOC108707,"
|
231
|
+
108723,10.91,8.21,4.72,3.5,8.82,10.67,3.02,23.5,13.1,2.81,,,11.83,4.08,9.45,15.88,12.07,3.51,8.27,7.99,10.07,11.68,2.18,6.97,,2.26,,,Card11,"caspase recruitment domain family, member 11,caspase recruitment domain family, member 11,"
|
232
|
+
108735,0.78,1.24,1.1,0.99,0.73,1,0.92,1.05,0.84,0.68,,,0.9,0.45,0.7,0.61,0.81,1.13,0.77,0.96,1.17,0.99,0.85,0.76,,1.06,,,Sft2d2,"SFT2 domain containing 2"
|
233
|
+
108737,23.63,16.83,12.31,12.77,9.62,15.86,11.13,18.95,13.15,16.44,,,17.41,14.62,15.4,7.36,18.88,8.21,14.18,16.23,17.04,15.26,21.59,15.19,,12.61,,,Oxsr1,"oxidative-stress responsive 1,oxidative-stress responsive 1,"
|
234
|
+
108755,0.35,0.87,0.72,0.94,2.11,0.27,1.77,0.55,0.92,0.99,,,0.43,1,0.43,0.59,0.7,1.41,0.99,0.83,0.57,0.52,0.77,0.71,,1.24,,,Lyrm2,"LYR motif containing 2"
|
235
|
+
108760,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0.01,0,0,0,0,0,0,,0,,,Galntl1,"UDP-N-acetyl-alpha-D-galactosamine:polypeptide,UDP-N-acetyl-alpha-D-galactosamine:polypeptide,UDP-N-acetyl-alpha-D-galactosamine:polypeptide,"
|
236
|
+
108767,22.91,16.83,14.32,11.93,14.72,20.46,12.87,14.47,21.25,11.59,,,16.62,14.51,17.75,13.85,19.18,19.9,20.15,21.59,18.24,16.16,19.5,16.66,,15.79,,,Pnrc1,"proline-rich nuclear receptor coactivator 1"
|
237
|
+
108800,0.16,0.07,0,0.07,0.07,0.15,0.02,0.13,0.11,0.25,,,0.06,0.08,0.11,0.1,0.06,0.01,0.18,0.2,0.14,0.2,0.18,0.16,,0.04,,,Ston2,"stonin 2"
|
238
|
+
108802,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0.09,0,0,0,0,0,0,,0,,,Calr4,"calreticulin 4,calreticulin 4,"
|
239
|
+
108803,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,4933402P03Rik,"hypothetical protein LOC108803"
|
240
|
+
108811,2.95,2.81,2.1,0.65,0.75,2.53,3.43,3.45,2.89,1.84,,,3.2,1.58,1.63,3.37,2.06,2.01,1.07,1.77,2.09,2.05,1.37,1.67,,0.64,,,Ccdc122,"coiled-coil domain containing 122"
|
241
|
+
108812,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0.06,0,0,0,0,0,0,,0,,,Als2cr12,"amyotrophic lateral sclerosis 2 (juvenile)"
|
242
|
+
108816,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,n/a,n/a
|
243
|
+
108837,9.97,7.72,6.16,6.9,7.61,9.94,5.61,10.95,6.47,9.75,,,9.68,8.12,9.51,6.65,9.69,6.11,7.61,8.86,8.64,8,10.85,8.86,,5.53,,,Ibtk,"inhibitor of Bruton's tyrosine kinase,inhibitor of Bruton's tyrosine kinase,"
|
244
|
+
108841,1.78,3.35,3.46,2.88,2,2.78,3.45,3.52,4.33,4,,,2.45,2.79,2.13,2.32,3.41,1.74,2.91,2.68,2.1,2.46,3.33,2.68,,4.45,,,Rdh13,"retinol dehydrogenase 13 (all-trans and 9-cis),retinol dehydrogenase 13 (all-trans and 9-cis),"
|
245
|
+
108853,2.64,2.39,0.69,1.77,4.85,3.01,3.39,2.2,2.73,2.5,,,3.12,3.57,2.87,2.77,3.08,3.34,3.98,3.12,4.07,2.7,2.8,2.98,,3.2,,,Mtrf1l,"mitochondrial translational release factor"
|
246
|
+
108888,13.21,15.83,10.69,13.55,14.17,14.82,10.84,15.06,16.2,17.48,,,14.87,16.36,13.02,15.29,13.6,11.65,14.47,11.92,13.55,15.69,13.44,16.07,,11.28,,,Atad3a,"AAA-ATPase TOB3"
|
247
|
+
108897,0,0,0.18,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0.02,0,,0,,,2810003C17Rik,"ionized calcium binding adapter molecule 2"
|
248
|
+
108899,0.42,0.2,0.1,0.05,0.11,0.23,0.08,0.2,0.14,0.1,,,0.44,0.12,0.07,0.01,0.18,0.01,0.18,0.18,0.13,0.05,0.2,0.2,,0.19,,,2700081O15Rik,"hypothetical protein LOC108899,hypothetical protein LOC108899,"
|
249
|
+
108900,2.24,2.3,3.34,1.89,3.61,2.87,3.73,1.15,2.23,2.08,,,2.62,2.47,3.2,3.49,1.72,3.98,1.04,2.44,2.84,1.3,3.08,2.06,,3.62,,,2700049P18Rik,"hypothetical protein LOC108900"
|
250
|
+
108902,17.68,20.65,20.42,19.62,18.96,16.98,16.8,18.81,18.85,18.19,,,17.01,18.06,19.11,17.49,21.58,23.62,18.65,17.92,18.22,21.8,22.78,18.89,,22.12,,,B3gnt1,"beta-1,3-N-acetylglucosaminyltransferase bGnT-6,beta-1,3-N-acetylglucosaminyltransferase bGnT-6,"
|
251
|
+
108903,36.48,35.95,29.82,32.23,23.83,32.08,30.11,33.22,27.06,28.07,,,37.58,28.51,38.59,21.34,30.26,22.56,27.13,28.43,29.64,32.79,33.23,25.71,,37,,,Tbcd,"tubulin-specific chaperone d"
|
252
|
+
108907,33.38,18.88,13.76,7.19,13.89,17.86,7.75,16.32,10.34,12.87,,,25.52,20.23,24.28,24.38,17.71,24.13,8.26,14.27,26,13.35,37.65,16.09,,10.69,,,Nusap1,"nucleolar and spindle associated protein 1"
|
253
|
+
108909,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,2610208M17Rik,"axin interaction partner and dorsalization,axin interaction partner and dorsalization,axin interaction partner and dorsalization,"
|
254
|
+
108911,83.28,90.65,79.06,72.35,71.22,89.45,51.65,86.48,63.31,60.2,,,99.88,74.93,81.7,59.96,69.62,51.69,63.99,59.23,87.37,80.58,93.72,79.49,,63.27,,,Rcc2,RCC1-like
|
255
|
+
108927,0.15,0.26,0.02,0.33,0.4,0,0.42,0.37,0.04,0.22,,,0,0.21,0.79,0.18,0.2,0.24,0.19,0.08,0.16,0.12,0.08,0.05,,0,,,Lhfp,"lipoma HMGIC fusion partner"
|
256
|
+
108943,1.68,2.2,0.72,1.52,1.66,1.69,1.37,1.65,1.57,1.45,,,2.73,1.92,1.92,1.72,2.13,1.81,2.27,1.84,2.54,2.02,2.59,2.45,,1.75,,,Rg9mtd2,"RNA (guanine-9-) methyltransferase domain,RNA (guanine-9-) methyltransferase domain,"
|
257
|
+
108946,3.04,3.87,4.38,2.7,2.68,4.11,2.23,3.99,4.95,4.86,,,3.51,4.45,3.68,2.83,4.99,2.22,3.43,3.71,3.92,4.01,4.69,3.94,,2.2,,,Zzz3,"zinc finger, ZZ domain containing 3"
|
258
|
+
108954,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Ppp1r15b,"protein phosphatase 1, regulatory subunit 15B"
|
259
|
+
108956,0,0.03,0,0,0.26,0,0,1.28,0.02,0.2,,,0,0,0,0.38,0.09,0.16,0.44,0,0.44,0.27,0.06,0,,0,,,2210421G13Rik,"hypothetical protein LOC108956"
|
260
|
+
108958,4.08,3.81,4.15,3.73,4.76,4.26,4.74,4.21,4.88,5.28,,,4.89,4.89,4.03,3.7,4.76,3.79,5.28,4.68,4.71,4.93,5.59,4.82,,4.72,,,5730472N09Rik,"hypothetical protein LOC108958,hypothetical protein LOC108958,"
|
261
|
+
108960,12.53,14.13,18.6,15.68,15.85,15.96,21.73,20.96,15.88,21.01,,,11.08,15.97,18.46,13.17,16.25,11.49,17.72,19.7,13.87,15.53,9.77,21.02,,16.64,,,Irak2,"interleukin-1 receptor-associated kinase 2,interleukin-1 receptor-associated kinase 2,interleukin-1 receptor-associated kinase 2,"
|
262
|
+
108961,15.59,8.3,6.34,3.17,7.55,12.21,3.23,8.49,6.22,7.42,,,15.73,12.41,10.66,11.51,10.87,8.95,6.59,9.1,15.58,6.36,20.17,8.5,,4.43,,,E2f8,"E2F transcription factor 8,E2F transcription factor 8,"
|
263
|
+
108978,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,4930555G01Rik,"hypothetical protein LOC108978"
|
264
|
+
108989,21.25,14.87,12.73,6.23,14.97,23.71,4.04,20.98,22.79,20.17,,,20.07,24.17,8.92,16.92,16.78,7.55,16.89,24.41,27.18,9.82,15.39,29.01,,6.64,,,Tpr,"nuclear pore complex-associated protein Tpr,nuclear pore complex-associated protein Tpr,nuclear pore complex-associated protein Tpr,"
|
265
|
+
108995,0.05,0.04,0,0.03,0.74,0.17,0,0.26,0.03,0.13,,,0.13,0.26,0.05,0.21,0.15,0.13,0.15,0.06,0.05,0.2,0.23,0.13,,0.24,,,Tbc1d10c,"TBC1 domain family, member 10c,TBC1 domain family, member 10c,"
|
266
|
+
109006,14.9,12.73,9.88,22.82,25.13,8.05,12.22,19,17.89,9.26,,,15.81,9.13,18.29,12.24,15.51,12.34,8.85,15.15,18.29,17.86,7.57,15.43,,14.19,,,Ciapin1,"cytokine induced apoptosis inhibitor 1"
|
267
|
+
109019,14.64,10.45,15.86,15.4,15.45,10.96,14.38,22.92,12.49,11.16,,,11.18,9.44,15.46,14.85,11.84,17.33,16.67,14.82,15.32,17.23,14.66,14.23,,14.9,,,Obfc2a,"oligonucleotide/oligosaccharide-binding fold,oligonucleotide/oligosaccharide-binding fold,"
|
268
|
+
109032,20.66,15.59,14.27,17.4,25.88,27.13,24.46,24.32,17.18,13.9,,,16.62,19.86,25.17,26.47,18.93,15.92,17.37,19.49,23.1,18.05,8.76,24.7,,19.91,,,Sp110,"Sp110 nuclear body protein,Sp110 nuclear body protein,Sp110 nuclear body protein,"
|
269
|
+
109042,0,0.68,1.01,0.27,1.83,0.15,0.7,0.17,0.63,0.1,,,0.54,0.49,0,0.45,0.09,1.22,0.5,0.48,0.1,0.4,1.07,0.81,,0.35,,,Prkcdbp,"protein kinase C, delta binding protein"
|
270
|
+
109050,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,6530418L21Rik,"hypothetical protein LOC109050,hypothetical protein LOC109050,"
|
271
|
+
109052,0.01,0,0,0,0,0.02,0,0,0,0.01,,,0,0.01,0,0.01,0.04,0.01,0.03,0.01,0.01,0.01,0.02,0.02,,0.02,,,Krt75,"keratin 75"
|
272
|
+
109054,30.75,33.94,27.82,26.51,36.7,22.29,37.06,27.42,27.56,22.31,,,20.07,25.45,31.64,45.33,28.99,54.52,26.47,24.85,25.1,25.91,29.71,21.18,,42.75,,,Pfdn4,"prefoldin 4"
|
273
|
+
109065,5.07,5.84,6.56,4.8,5.46,4.54,4.5,5.06,5.27,5.49,,,5.46,5.57,5.68,6.17,4.95,5.81,3.79,3.91,5.17,4.42,7.23,4.91,,5.24,,,1110034A24Rik,"hypothetical protein LOC109065"
|
274
|
+
109075,14.27,20.39,24.69,23.81,35.89,14.36,28.73,17.01,19.75,16.42,,,15.26,19.58,16,20.55,17.67,25.61,16.32,16.59,16.83,18.91,14.78,15.99,,29.5,,,Exosc4,"exosome component 4"
|
275
|
+
109077,14.63,14.28,14.25,13.75,10.99,11.4,9.86,12.49,9.73,12.47,,,14.39,10.83,13.01,9.89,13.42,11.88,13.2,12.2,13.49,11.75,13.75,12.72,,11.81,,,Ints5,"integrator complex subunit 5"
|
276
|
+
109079,13.68,10.53,9.25,8.98,8.86,8.64,5.7,9.17,7.01,8.7,,,11.97,10.53,10.85,9.86,10.13,10.28,7.81,8.6,10.63,7.98,13.67,7.94,,8.45,,,Sephs1,"selenophosphate synthetase 1,selenophosphate synthetase 1,"
|
277
|
+
109082,21.44,22.71,19.52,19.91,22.74,26.81,20.5,22.92,23.3,14.64,,,23.03,23.24,22.89,27.95,22.64,21.91,20.11,22.41,22.33,20.87,14.64,24.52,,23.92,,,Fbxw17,"F-box and WD-40 domain protein 17"
|
278
|
+
109093,12.7,15.09,12.64,15.91,16.75,8.94,13.28,14.63,13.84,15.24,,,13.29,12.62,12.85,16.29,12.59,13.25,13.19,12.43,10.56,15.07,13.9,12.11,,18.91,,,Rars2,"arginyl-tRNA synthetase-like"
|
279
|
+
109108,13.81,14.75,14.59,13.81,11.63,14.2,14.04,15.16,15.19,15.7,,,14.3,16.32,15.48,14.08,16.37,12.54,14.41,14.86,13.02,13.68,12.82,14.03,,16.86,,,Slc30a9,"solute carrier family 30 (zinc transporter),,solute carrier family 30 (zinc transporter),,solute carrier family 30 (zinc transporter),,"
|
280
|
+
109113,44.3,39.61,39.56,42.76,25.93,40.93,34.01,45.4,38.07,37.52,,,44.92,38.96,38.09,40.57,43.58,33.18,46.14,38.45,38.28,45.12,45.17,36.75,,30.02,,,Uhrf2,"ubiquitin-like, containing PHD and RING finger,ubiquitin-like, containing PHD and RING finger,"
|
281
|
+
109115,10.51,10.13,11.72,10.6,10.88,7.15,11.69,11.12,9.74,10.49,,,9.1,9.87,7.69,12.18,8.55,12.63,12.11,9.33,8.44,10.16,10.43,11.47,,11.64,,,Supt3h,"suppressor of Ty 3 homolog"
|
282
|
+
109129,45.45,63.88,50.6,71.04,80.37,48.71,81.39,54.01,52.41,57.54,,,54.08,60.31,62.65,74.14,50.34,78.01,48.14,50.33,53.09,50.83,54.88,49.58,,85.41,,,2010311D03Rik,"hypothetical protein LOC109129"
|
283
|
+
109135,1.39,1.11,0.34,0.56,0.82,1.04,0.4,1.2,0.63,0.85,,,1.52,1.11,0.83,0.86,1.03,0.57,0.84,0.68,0.89,0.88,0.81,1.33,,0.38,,,Plekha5,"phosphoinositol 3-phosphate-binding protein-2,phosphoinositol 3-phosphate-binding protein-2,phosphoinositol 3-phosphate-binding protein-2,phosphoinositol 3-phosphate-binding protein-2,phosphoinositol 3-phosphate-binding protein-2,"
|
284
|
+
109136,2.45,2.38,1.87,2.37,3.36,1.5,3.22,1.7,2.46,2.5,,,1.83,2.31,2.32,3.16,1.52,3.03,2.33,1.86,2.02,2.27,1.37,1.79,,3.01,,,Mmaa,"methylmalonic aciduria type A"
|
285
|
+
109145,10.03,18.6,12.45,13.47,17.31,13.66,18.46,15.23,11.33,12.61,,,19.46,15.99,17.91,18.31,15.04,20.7,12.52,13.92,21.58,15.69,18.69,13.6,,22.11,,,Gins4,SLD5
|
286
|
+
109151,1.83,2.1,1.53,1.35,1.75,2.83,0.9,3.04,2.64,3.02,,,2.79,2.73,1.66,1.64,3.26,1.13,1.98,3.71,2.55,1.98,2.41,2.97,,1.03,,,Chd9,"chromodomain helicase DNA binding protein 9,chromodomain helicase DNA binding protein 9,"
|
287
|
+
109154,68.81,54.81,42.44,46.78,40.36,63.99,36.64,51.31,32.27,48.7,,,64.61,48.84,56.15,33.67,48.34,39.1,44.27,44.94,67.86,45.06,63.62,38.73,,37.85,,,2410014A08Rik,"hypothetical protein LOC109154"
|
288
|
+
109161,9.57,10.41,9.52,9.95,6.85,9.29,9.35,8.98,9.04,10.07,,,9.06,9.87,8.64,11.49,9.21,10.37,9.71,9.01,7.86,8.68,9.54,9.33,,10.64,,,Ube2q2,"ubiquitin-conjugating enzyme E2Q 2"
|
289
|
+
109168,4.02,6.33,5.18,5.66,2.46,6.23,5.26,5.88,3.72,4.39,,,6.26,4.52,6.38,3.25,5.53,2.68,3.06,5.29,4.96,5.26,7.96,5.49,,4.76,,,5730596K20Rik,"hypothetical protein LOC109168"
|
290
|
+
109205,0,0.06,0,0.02,0.04,0,0,0.03,0,0.04,,,0.03,0,0.02,0,0.01,0.01,0,0,0.09,0.01,0.02,0.08,,0,,,Sobp,"sine oculis-binding protein homolog,sine oculis-binding protein homolog,"
|
291
|
+
109212,40.18,27.67,21.63,13.74,24.53,26.02,14.05,15.85,15.12,12.29,,,36.77,24.27,27.2,31.67,25.85,49.13,13.26,15.98,39.43,17.81,45.94,16.91,,22.78,,,6720460F02Rik,"hypothetical protein LOC109212"
|
292
|
+
109218,0,0,0,0.08,0,0,0,0.04,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Tmem139,"hypothetical protein LOC109218"
|
293
|
+
109225,55.15,253.8,243.69,323.83,223.14,202.69,614.56,211.98,416.25,247.56,,,110.75,132.82,305.54,582.38,145.64,226.68,259.92,153.4,127.28,342.97,109.95,176.22,,243.65,,,Ms4a7,"membrane-spanning 4-domains, subfamily A, member"
|
294
|
+
109229,16.8,13.36,20.54,16.24,11.23,11.71,24.54,13.53,11.66,13.24,,,12.87,10.74,14.46,12.88,14.69,16.03,16.01,14.14,14.09,15.8,15.09,11.22,,20.69,,,Ppp4r1l,"protein phosphatase 4, regulatory subunit 1-like"
|
295
|
+
109232,3.81,12.41,5.4,6.59,6.87,5.27,7.34,4.38,5.83,6.79,,,6.11,8.39,6.89,8.22,6.33,7.52,6.46,7.01,8.88,7.89,9.21,4.05,,10.99,,,Sccpdh,"saccharopine dehydrogenase (putative)"
|
296
|
+
109241,0.99,1.05,0.62,0.76,1,1.6,0.85,1.38,1.17,1.54,,,1.32,1.36,0.93,0.52,1.57,0.4,1.32,1.44,1.25,1.13,1.09,1.12,,0.47,,,Mbd5,"methyl-CpG binding domain protein 5,methyl-CpG binding domain protein 5,methyl-CpG binding domain protein 5,"
|
297
|
+
109242,2.15,1.31,1.06,0.85,1.03,1.81,0.22,1.36,0.68,1.3,,,2.36,1.65,1.69,1.09,1.73,1.05,0.87,1.38,2.1,1.25,2.89,1.19,,0.48,,,Kif24,"kinesin family member 24,kinesin family member 24,"
|
298
|
+
109245,0.32,2.94,0,5.45,2.92,0.84,1.81,3.09,1.73,1.03,,,2.72,3.28,1.33,3.26,1.24,0.39,3.75,1.49,0.77,5.93,3.53,5.45,,2.02,,,Lrrc39,"leucine rich repeat containing 39 isoform 1"
|
299
|
+
109246,0.18,0.23,0.24,0.23,0.13,0.18,0,0.15,0.07,0.18,,,0.13,0.24,0.1,0.04,0.3,0.17,0.23,0.22,0.52,0.07,0.28,0.13,,0,,,Tspan9,"tetraspan NET-5,tetraspan NET-5,tetraspan NET-5,"
|
300
|
+
109254,0,0,0.04,0,0,0,0,0,0,0,,,0,0.07,0,0,0.04,0,0,0,0,0,0,0,,0,,,9530008L14Rik,"hypothetical protein LOC109254,hypothetical protein LOC109254,"
|
301
|
+
109263,3.8,3.76,2.1,3.58,2.84,4.06,2.4,4.39,3.94,4.65,,,4.35,3.73,3.41,2.52,4.23,2.31,3.67,4.77,4.21,3.93,5.06,4.99,,1.7,,,Rlf,"rearranged L-myc fusion sequence,rearranged L-myc fusion sequence,rearranged L-myc fusion sequence,"
|
302
|
+
109264,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Me3,"malic enzyme 3, NADP(+)-dependent,,malic enzyme 3, NADP(+)-dependent,,malic enzyme 3, NADP(+)-dependent,,"
|
303
|
+
109270,0.14,0.4,0,0.19,0.13,1.18,0.6,0.08,0,0.04,,,0.8,0.47,0.2,0.07,0.11,0.08,0.31,0.14,0.1,0.35,0.07,0.71,,0.04,,,Arhgap8,"Rho GTPase activating protein 8,Rho GTPase activating protein 8,Rho GTPase activating protein 8,"
|
304
|
+
109272,0,0,0,0,0.03,0,0,0,0,0,,,0.07,0,0,0,0.02,0,0,0,0,0,0,0,,0,,,8030451F13Rik,"myosin binding protein C, slow type,myosin binding protein C, slow type,"
|
305
|
+
109275,8.01,8.86,8.05,8.26,8.53,8.18,7.6,7.57,8.58,8.23,,,9.44,7.68,7.63,8.3,7.57,9.57,9.95,7.97,9.79,8.98,6.78,8.15,,8.47,,,Actr5,"ARP5 actin-related protein 5 homolog,ARP5 actin-related protein 5 homolog,"
|
306
|
+
109280,0,0,0,0,0,0,0,0,0,0.03,,,0,0,0,0,0.08,0,0.03,0,0,0.04,0,0,,0,,,9330176C04Rik,"hypothetical protein LOC109280"
|
307
|
+
109284,50.62,46.35,46.93,55.66,60.05,45.34,42.92,38.97,43.77,37.85,,,51.5,40.12,47.5,41.82,42.38,46.8,46.87,41.98,44.53,49.38,44.15,43.71,,57.65,,,C030046I01Rik,"hypothetical protein LOC109284"
|
308
|
+
109294,0.01,0,0,0,0.01,0.04,0.01,0,0.03,0,,,0.04,0,0.01,0.03,0.01,0.03,0,0,0.01,0,0,0,,0.01,,,C030045D06Rik,"hypothetical protein LOC109294"
|
309
|
+
109305,29.26,36.24,40.02,32.96,37.26,26.84,32.87,30.79,30.65,28.78,,,36.18,33.18,40.84,34.89,31.37,37.99,32.53,32.52,32.47,34.22,28.92,28.58,,40.73,,,Orai1,"transmembrane protein 142A,transmembrane protein 142A,"
|
310
|
+
109314,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,A030004J04Rik,"hypothetical protein LOC109314"
|
311
|
+
109323,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,C1qtnf7,"C1q and tumor necrosis factor related protein 7,C1q and tumor necrosis factor related protein 7,"
|
312
|
+
109331,19.9,14.47,12.48,10.46,13.79,15.69,7.09,15.43,17.34,17.71,,,16.33,15.56,13.66,14.82,16.35,10.67,15.16,14.16,17.33,12.89,14.82,18.07,,9.24,,,Rnf20,"ring finger protein 20,ring finger protein 20,"
|
313
|
+
109332,0.14,0.08,0,0.05,0.14,0.08,0.22,0.6,0.05,0.06,,,0.14,0.05,0.12,0,0.05,0.13,0.05,0.11,0.05,0.09,0.06,0.08,,0.09,,,Cdcp1,"CUB domain-containing protein 1,CUB domain-containing protein 1,"
|
314
|
+
109333,7.43,7.27,4.9,5.57,4.99,9.41,6.49,9.9,7.64,9.99,,,9,8.19,7.86,6.29,9.16,4.9,7.16,9.17,8.62,7.96,8.56,8.67,,6.21,,,Pkn2,"protein kinase N2,protein kinase N2,"
|
315
|
+
109342,0,0,0,0,0,0,0,0,0.05,0,,,0,0.03,0.05,0,0,0,0,0,0,0,0.02,0.08,,0.17,,,Slc5a10,"solute carrier family 5 (sodium/glucose,solute carrier family 5 (sodium/glucose,"
|
316
|
+
109346,2.95,2.81,2.39,2.83,5.62,2.22,3.62,2.9,2.9,3.02,,,3.23,2.49,3.01,3.7,2.69,5.25,1.92,2.09,3.48,2.16,2.72,2.79,,5.57,,,Ankrd39,"ankyrin repeat domain 39"
|
317
|
+
109349,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,C630035N08Rik,"hypothetical protein LOC109349"
|
318
|
+
109359,29.54,31.02,29.09,29.62,19.34,27.25,26.35,31.62,28.77,31.68,,,26.04,27.48,30.09,25.17,30.62,25.58,37.53,33.28,25.64,34.08,31.09,31.23,,28.43,,,C430003P19Rik,"hypothetical protein LOC109359,hypothetical protein LOC109359,"
|
319
|
+
109552,56.27,45.76,36.91,49.02,58.03,31.26,58.47,41.91,43.71,38.04,,,39.93,39.49,42.09,46.48,38.69,61.83,37.9,40.92,38.82,37.01,39.84,36,,60.42,,,Sri,"sorcin isoform 1"
|
320
|
+
109575,0,0,0,0.15,0,0,0,0.14,0,0.03,,,0,0,0.1,0,0,0,0,0.02,0,0,0,0.16,,0,,,Tbx10,"T-box 10 isoform 1"
|
321
|
+
109593,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Lmo3,"LIM domain only 3,LIM domain only 3,"
|
322
|
+
109594,1.44,0.29,0,0.46,0,0.1,0.05,0.09,0.28,0.37,,,0.59,0.34,0.16,0.47,0.65,0.48,0.2,0.06,1.27,0.33,0.32,0.1,,0.93,,,Lmo1,"LIM domain only 1"
|
323
|
+
109624,0.24,0.06,0.35,0.13,0.3,0.21,0.16,0.36,0.07,0.27,,,0.38,0.23,0.22,0.2,0.13,0.15,0.13,0.16,0.2,0.35,0.1,0.08,,0.03,,,Cald1,"caldesmon 1"
|
324
|
+
109637,0.92,0.03,0,0.08,0,0.61,0,0.08,0.17,0.52,,,0.05,0.2,0,0.11,0.25,0.11,0.18,0.32,0.12,0.12,0.24,0.09,,0.3,,,Upk1a,"uroplakin 1A,uroplakin 1A,"
|
325
|
+
109648,1171.23,771.99,1289.35,1663.19,1628.95,856.49,2315.92,1825.82,1347.59,1186.82,,,627.45,952.99,1281.94,1116.12,1016.32,1699.46,1142.85,946.81,666.24,1076.77,385.55,1298.5,,1542.05,,,Npy,"neuropeptide Y"
|
326
|
+
109652,0.6,0.88,0.85,0.05,1.56,0.56,1.71,0.94,0.52,0.63,,,0.43,1.39,1.61,2.68,1.17,2.15,0.25,1.98,1.5,0.96,1.63,1.89,,2.33,,,Acy1,"aminoacylase 1"
|
327
|
+
109658,20.9,22.98,16.05,15.98,13.75,23.68,15.36,22.42,20.03,22.89,,,25.6,21.7,22.4,18.11,22.76,15.43,21.98,22.59,22.99,21.81,25.14,23.44,,15.85,,,Txlna,"taxilin alpha,taxilin alpha,"
|
328
|
+
109660,0,0.1,0,0,0,0,0,0.13,0.14,0,,,0.21,0.13,0,0,0.07,0,0,0.04,0.1,0.04,0,0.52,,0.13,,,Ctrl,chymotrypsin-like
|
329
|
+
109663,0,0,0,0.1,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Hoxc11,"homeobox C11"
|
330
|
+
109672,128.29,168.71,224.15,156.6,215.57,133.13,188.13,185.07,181,132.51,,,148.8,170.87,166.07,241.91,161.31,311.4,159.99,162.61,185.37,149.35,163.42,143.88,,227.93,,,Cyb5,"cytochrome b-5"
|
331
|
+
109674,12.64,13.13,12.78,11.98,15.55,16.98,9.8,17,14.38,14.69,,,15.31,16.03,16.74,12.28,15.44,12.63,14.36,12.99,14.81,13.86,15.25,15.81,,12.85,,,Ampd2,"adenosine monophosphate deaminase 2 (isoform L),adenosine monophosphate deaminase 2 (isoform L),adenosine monophosphate deaminase 2 (isoform L),"
|
332
|
+
109676,1.1,0.44,0.97,0.6,1.07,1,0.27,0.51,0.23,0.29,,,1.16,0.69,0.18,2.12,0.51,0.14,0.4,0.27,1.14,0.69,0.14,0.23,,0.07,,,Ank2,"ankyrin 2, brain isoform 3"
|
333
|
+
109685,0.34,0.14,0,0.1,0.06,0.06,0.11,0,0.23,0.15,,,0.08,0.09,0.18,0.3,0.15,0,0.46,0.24,0.15,0.17,0.16,0.38,,0.13,,,Hyal3,"hyaluronoglucosaminidase 3"
|
334
|
+
109689,35.64,36.28,23.17,22.59,19.3,40.58,16.88,38.11,32.47,37.12,,,50.2,29.82,42.2,19.92,33.59,22.93,31.41,36.96,38.03,32.69,43.86,30.58,,21.83,,,Arrb1,"arrestin, beta 1 isoform A"
|
335
|
+
109697,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Cpa1,"carboxypeptidase A1"
|
336
|
+
109700,0.06,0,0.05,0.06,0.01,0.1,0,0.01,0.12,0.01,,,0.01,0.03,0,0.01,0.04,0.02,0.02,0.03,0.07,0.03,0.14,0.07,,0,,,Itga1,"integrin alpha 1,integrin alpha 1,"
|
337
|
+
109711,71.45,63.55,78.92,49.59,58.76,62.94,44.43,98.31,61.27,68.94,,,80.8,68.71,52.31,59.11,69.01,54.99,75.75,73.97,70.17,86.1,72.68,87.21,,42.6,,,Actn1,"actinin, alpha 1,actinin, alpha 1,"
|
338
|
+
109731,0,0,0,0.14,0,0.1,0.05,0.02,0.26,0,,,0,0,0,0,0,0,0.07,0,0,0.05,0,0,,0,,,Maob,"amine oxidase (flavin-containing)"
|
339
|
+
109754,154.44,109.54,122.34,104.12,103.61,132.78,99.98,108.43,117.77,127.13,,,135.58,136.84,109.33,123.72,114.88,116.74,137.24,133.29,121.51,133.06,125.21,152.53,,112.74,,,Cyb5r3,"diaphorase 1"
|
340
|
+
109778,156.6,121.94,162.42,106.17,217.53,146.49,231.12,134.71,98.32,121.49,,,97.1,171.82,187,237.32,147.12,163.74,90.47,85.96,129.58,149.84,200.22,81.83,,132.79,,,Blvra,"biliverdin reductase A,biliverdin reductase A,"
|
341
|
+
109785,3.95,3.88,4.14,3.88,3.75,3.56,3.42,4.23,3.25,4.29,,,5.34,4.66,3.46,3.28,4.43,3.31,3.78,4.05,4.68,4.42,4.72,3.67,,4.17,,,Pgm3,"phosphoglucomutase 3,phosphoglucomutase 3,phosphoglucomutase 3,"
|
342
|
+
109791,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Clps,"colipase, pancreatic"
|
343
|
+
109801,18.98,10.43,13.06,19.13,5.66,11.66,7.62,13.96,6.76,10.5,,,8.34,9.19,8.13,7.48,6.47,7.25,8.2,6.81,7.35,17.68,8.9,4.45,,11.5,,,Glo1,"glyoxalase 1"
|
344
|
+
109815,72.84,70.03,65.14,86.45,85.84,55.04,80.67,58.7,60.97,55.26,,,55.26,59.16,63.07,68.46,61.71,93.95,63.23,51.37,62.3,62.75,54.88,61.04,,95.14,,,H47,"selenoprotein S"
|
345
|
+
109820,0,0,0,0,0,0,0,0,0,0.06,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Pgc,"progastricsin (pepsinogen C)"
|
346
|
+
109821,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,F11,"coagulation factor XI"
|
347
|
+
109857,6.31,9.24,20.51,11.2,17.7,8.88,12.94,9.64,4.02,5.07,,,9.81,9.56,5.92,12.22,10.83,5.6,6.8,8.19,13.14,8.13,9.47,8.2,,17.02,,,Cbr3,"carbonyl reductase 3"
|
348
|
+
109880,1.6,1.96,1.45,2.32,1.17,2.29,1.37,2.81,2.37,3.16,,,2.6,2.66,2.02,2.06,2.66,1.34,2.67,2.75,2.68,2.59,2.5,2.46,,1.24,,,Braf,"Braf transforming,Braf transforming,Braf transforming,"
|
349
|
+
109889,0.22,0.07,0,0.04,0.09,0.01,0.07,0.12,0.16,0.08,,,0.04,0.03,0.06,0,0.07,0.1,0.12,0.07,0.03,0.04,0.07,0.03,,0.07,,,Mzf1,"myeloid zinc finger 1,myeloid zinc finger 1,myeloid zinc finger 1,"
|
350
|
+
109900,44.24,54.97,54.4,60.32,70.9,49.88,73.58,50.1,58.67,52.74,,,50.91,55.21,48.56,68.72,53.2,64.23,53.56,54.17,56.25,55.9,50.92,45.2,,69.18,,,Asl,"argininosuccinate lyase"
|
351
|
+
109901,1.67,3.48,4.53,2.82,3.24,2.09,2.78,2.1,3.65,0.74,,,2.46,3.1,2.17,3.11,1.84,4.59,2.54,1.62,1.99,4.52,2.51,2.69,,2.42,,,Ela1,"elastase 1, pancreatic"
|
352
|
+
109904,0,0,0,0,0,0,0.04,0.02,0.1,0.01,,,0,0,0,0,0,0,0.02,0,0,0,0,0,,0,,,Mcf2,"mcf.2 transforming,mcf.2 transforming,"
|
353
|
+
109905,30.42,35.35,35.69,33.64,41.66,23.36,30.56,30.39,24.63,25.61,,,28.76,26.6,36.02,42.2,29.25,42.64,27.96,32.51,39.06,28.1,32.28,21.96,,41.49,,,Rap1a,"RAS-related protein-1a"
|
354
|
+
109910,36.41,30.54,26.1,22.39,20.88,32.42,17.15,31.67,30.17,30.83,,,35.28,33.45,31.98,25.88,34.58,21.81,32.6,33.16,30.42,31.5,36.91,31.87,,17.99,,,Zfp91,"zinc finger protein 91"
|
355
|
+
109929,4.39,3.58,4.67,3.95,2.29,2.97,3.52,4.38,3.64,3.98,,,3.64,3.61,3.61,3.44,4.3,3.39,3.82,3.26,5.16,3.15,4.49,4.34,,4.72,,,Zbtb25,"zinc finger and BTB domain containing 25"
|
356
|
+
109934,69.35,53,59.49,53.37,51.66,74.11,45.56,93.67,64.78,90.53,,,70.52,65.19,49.16,51.31,70.36,41.11,70.44,72.63,65.52,71.31,54.52,77.42,,36.5,,,Abr,"active BCR-related isoform 1"
|
357
|
+
109978,0,0.06,0,0,0,0,0,0,0,0,,,0.02,0,0.05,0,0,0.04,0,0.01,0,0,0,0,,0,,,Art4,"ADP-ribosyltransferase 4"
|
358
|
+
109979,0,0,0,0,0,0.08,0,0.13,0,0,,,0,0.11,0,0,0,0.12,0.1,0,0,0,0.04,0.15,,0.05,,,Art3,"ADP-ribosyltransferase 3,ADP-ribosyltransferase 3,ADP-ribosyltransferase 3,ADP-ribosyltransferase 3,ADP-ribosyltransferase 3,"
|
359
|
+
110006,260.06,294.57,271,343.95,223.64,385.59,340.42,266.38,291.23,332.95,,,368.66,365.26,394.32,289.81,394.45,319.95,364.21,397.6,346.62,387.66,317.44,244.51,,226.98,,,Gusb,"glucuronidase, beta"
|
360
|
+
110012,33.61,42.56,48.34,45.57,73.03,32.89,67.66,30.84,38.49,29.45,,,34.26,38.38,32.12,41.33,27.68,56.47,37.53,28.78,36.11,34.12,31.07,33.4,,58.7,,,Gtrgeo22,"hypothetical protein LOC110012"
|
361
|
+
110033,32.09,22.16,20.54,10.29,23.05,22.17,10.98,17.51,13.25,14.18,,,31.62,24.02,25.45,24.95,20.03,27.15,11.5,16.63,33.37,14.85,34.26,17.78,,19.2,,,Kif22,"kinesin family member 22"
|
362
|
+
110052,61.38,22.97,23.89,14.71,16.48,38.04,10.74,23.02,22.85,26.55,,,38.34,35.03,30.62,29.41,27.94,20.55,19.85,24.25,36.12,22.85,41.21,31.15,,16.9,,,Dek,"DEK oncogene (DNA binding),DEK oncogene (DNA binding),"
|
363
|
+
110058,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Syt17,"synaptotagmin XVII,synaptotagmin XVII,synaptotagmin XVII,synaptotagmin XVII,"
|
364
|
+
110074,26.87,21.62,16.9,13.73,24.63,13.47,14.81,11.1,11.05,11.45,,,21.06,20.56,22.62,26.09,16.77,33.57,9.81,10.81,23.29,12.09,28.38,11.06,,24.11,,,Dut,"deoxyuridine triphosphatase,deoxyuridine triphosphatase,"
|
365
|
+
110075,0,0,0,0,0,0,0,0,0,0.01,,,0,0,0.24,0,0,0,0,0,0,0,0,0,,0,,,Bmp3,"bone morphogenetic protein 3,bone morphogenetic protein 3,"
|
366
|
+
110078,34.26,31.91,26.69,24.9,23.12,31.4,21.41,34.15,28.1,28.13,,,36.85,30.56,32.14,26.71,36.68,23.63,30.5,34.82,32.85,30.62,35.26,30.5,,22.83,,,Pygb,"brain glycogen phosphorylase"
|
367
|
+
110082,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Dnahc5,"dynein, axonemal, heavy chain 5"
|
368
|
+
110094,22.02,25.06,25.41,22.99,23.81,26.8,17.49,27.71,20.98,21.73,,,33.46,25.65,18.17,24.27,24.63,17.12,23.86,27.52,23.64,27.6,26.82,27.31,,19.26,,,Phka2,"phosphorylase kinase alpha 2,phosphorylase kinase alpha 2,phosphorylase kinase alpha 2,"
|
369
|
+
110095,10.67,21.6,18.16,13.56,13.5,20.4,8.02,11.88,21.35,12.97,,,13.74,13.05,19.43,9.92,14.08,13.05,18.8,20.29,16.24,14.05,20.8,15.05,,16.01,,,Pygl,"liver glycogen phosphorylase"
|
370
|
+
110109,33.16,38.08,35.04,29.54,35.06,29.52,23.61,33.55,30.62,34.35,,,31.3,32.1,26.08,29.08,31.39,27.11,37.77,29.13,30.49,33.22,26.82,34.8,,29.91,,,Nol1,"nucleolar protein 1"
|
371
|
+
110115,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Cyp11b1,"cytochrome P450, family 11, subfamily b,"
|
372
|
+
110119,7.09,11.22,9.97,10.77,13.85,8.65,13.18,10.3,10.26,11.72,,,11.28,9.57,10.09,13.18,9.12,11.63,9.72,11.37,11.26,10.94,7.71,10.82,,14.09,,,Mpi,"mannose phosphate isomerase"
|
373
|
+
110135,0,0,0,0,0,0,0,0,0,0,,,0,0,0,0,0,0,0,0,0,0,0,0,,0,,,Fgb,"fibrinogen, B beta polypeptide"
|
374
|
+
110147,68.55,56.77,44.51,46.96,49.31,66.09,38.91,51.36,49.61,40.57,,,64.12,51.31,51.78,49.08,56.12,45.42,49.06,51.66,62.13,50.8,60.76,54.6,,40.16,,,Ehmt2,"euchromatic histone lysine N-methyltransferase 2,euchromatic histone lysine N-methyltransferase 2,"
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: bio-table
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.0.
|
4
|
+
version: 0.0.2
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -9,11 +9,11 @@ authors:
|
|
9
9
|
autorequire:
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
|
-
date: 2012-
|
12
|
+
date: 2012-07-15 00:00:00.000000000Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: bio-logger
|
16
|
-
requirement: &
|
16
|
+
requirement: &23495840 !ruby/object:Gem::Requirement
|
17
17
|
none: false
|
18
18
|
requirements:
|
19
19
|
- - ! '>='
|
@@ -21,10 +21,10 @@ dependencies:
|
|
21
21
|
version: '0'
|
22
22
|
type: :runtime
|
23
23
|
prerelease: false
|
24
|
-
version_requirements: *
|
24
|
+
version_requirements: *23495840
|
25
25
|
- !ruby/object:Gem::Dependency
|
26
26
|
name: rspec
|
27
|
-
requirement: &
|
27
|
+
requirement: &23495320 !ruby/object:Gem::Requirement
|
28
28
|
none: false
|
29
29
|
requirements:
|
30
30
|
- - ~>
|
@@ -32,10 +32,10 @@ dependencies:
|
|
32
32
|
version: 2.8.0
|
33
33
|
type: :development
|
34
34
|
prerelease: false
|
35
|
-
version_requirements: *
|
35
|
+
version_requirements: *23495320
|
36
36
|
- !ruby/object:Gem::Dependency
|
37
37
|
name: rdoc
|
38
|
-
requirement: &
|
38
|
+
requirement: &23494780 !ruby/object:Gem::Requirement
|
39
39
|
none: false
|
40
40
|
requirements:
|
41
41
|
- - ~>
|
@@ -43,10 +43,10 @@ dependencies:
|
|
43
43
|
version: '3.12'
|
44
44
|
type: :development
|
45
45
|
prerelease: false
|
46
|
-
version_requirements: *
|
46
|
+
version_requirements: *23494780
|
47
47
|
- !ruby/object:Gem::Dependency
|
48
48
|
name: cucumber
|
49
|
-
requirement: &
|
49
|
+
requirement: &23494180 !ruby/object:Gem::Requirement
|
50
50
|
none: false
|
51
51
|
requirements:
|
52
52
|
- - ! '>='
|
@@ -54,10 +54,10 @@ dependencies:
|
|
54
54
|
version: '0'
|
55
55
|
type: :development
|
56
56
|
prerelease: false
|
57
|
-
version_requirements: *
|
57
|
+
version_requirements: *23494180
|
58
58
|
- !ruby/object:Gem::Dependency
|
59
59
|
name: bundler
|
60
|
-
requirement: &
|
60
|
+
requirement: &23493680 !ruby/object:Gem::Requirement
|
61
61
|
none: false
|
62
62
|
requirements:
|
63
63
|
- - ! '>'
|
@@ -65,10 +65,10 @@ dependencies:
|
|
65
65
|
version: 1.0.0
|
66
66
|
type: :development
|
67
67
|
prerelease: false
|
68
|
-
version_requirements: *
|
68
|
+
version_requirements: *23493680
|
69
69
|
- !ruby/object:Gem::Dependency
|
70
70
|
name: jeweler
|
71
|
-
requirement: &
|
71
|
+
requirement: &23493160 !ruby/object:Gem::Requirement
|
72
72
|
none: false
|
73
73
|
requirements:
|
74
74
|
- - ~>
|
@@ -76,10 +76,10 @@ dependencies:
|
|
76
76
|
version: 1.8.3
|
77
77
|
type: :development
|
78
78
|
prerelease: false
|
79
|
-
version_requirements: *
|
79
|
+
version_requirements: *23493160
|
80
80
|
- !ruby/object:Gem::Dependency
|
81
81
|
name: bio
|
82
|
-
requirement: &
|
82
|
+
requirement: &23492660 !ruby/object:Gem::Requirement
|
83
83
|
none: false
|
84
84
|
requirements:
|
85
85
|
- - ! '>='
|
@@ -87,10 +87,10 @@ dependencies:
|
|
87
87
|
version: 1.4.2
|
88
88
|
type: :development
|
89
89
|
prerelease: false
|
90
|
-
version_requirements: *
|
90
|
+
version_requirements: *23492660
|
91
91
|
- !ruby/object:Gem::Dependency
|
92
92
|
name: rdoc
|
93
|
-
requirement: &
|
93
|
+
requirement: &23492180 !ruby/object:Gem::Requirement
|
94
94
|
none: false
|
95
95
|
requirements:
|
96
96
|
- - ~>
|
@@ -98,7 +98,7 @@ dependencies:
|
|
98
98
|
version: '3.12'
|
99
99
|
type: :development
|
100
100
|
prerelease: false
|
101
|
-
version_requirements: *
|
101
|
+
version_requirements: *23492180
|
102
102
|
description: Functions and tools for tranforming and changing tab delimited and comma
|
103
103
|
separated table files - useful for Excel sheets and SQL/RDF output
|
104
104
|
email: pjotr.public01@thebird.nl
|
@@ -127,8 +127,11 @@ files:
|
|
127
127
|
- lib/bio-table/diff.rb
|
128
128
|
- lib/bio-table/filter.rb
|
129
129
|
- lib/bio-table/formatter.rb
|
130
|
+
- lib/bio-table/indexer.rb
|
131
|
+
- lib/bio-table/merge.rb
|
130
132
|
- lib/bio-table/overlap.rb
|
131
133
|
- lib/bio-table/parser.rb
|
134
|
+
- lib/bio-table/rewrite.rb
|
132
135
|
- lib/bio-table/table.rb
|
133
136
|
- lib/bio-table/tablereader.rb
|
134
137
|
- lib/bio-table/tablerow.rb
|
@@ -137,6 +140,7 @@ files:
|
|
137
140
|
- spec/bio-table_spec.rb
|
138
141
|
- spec/spec_helper.rb
|
139
142
|
- test/data/input/table1.csv
|
143
|
+
- test/data/input/table2.csv
|
140
144
|
homepage: http://github.com/pjotrp/bioruby-table
|
141
145
|
licenses:
|
142
146
|
- MIT
|
@@ -152,7 +156,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
|
152
156
|
version: '0'
|
153
157
|
segments:
|
154
158
|
- 0
|
155
|
-
hash: -
|
159
|
+
hash: -1776127102043822175
|
156
160
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
157
161
|
none: false
|
158
162
|
requirements:
|
@@ -161,8 +165,8 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
161
165
|
version: '0'
|
162
166
|
requirements: []
|
163
167
|
rubyforge_project:
|
164
|
-
rubygems_version: 1.8.
|
168
|
+
rubygems_version: 1.8.10
|
165
169
|
signing_key:
|
166
170
|
specification_version: 3
|
167
|
-
summary:
|
171
|
+
summary: Swiss knife of tabulated data; transforming/filtering tab/csv files
|
168
172
|
test_files: []
|