bio-nwk 0.1.2 → 0.1.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/bio/nwk/version.rb +1 -1
- data/lib/bio/nwk.rb +7 -0
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 8d9592e998026208adab8760c3c98f61c7dca740ede2e2634146252abeea18cc
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4
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data.tar.gz: be558a160cdc49fed06d255f84f72bde9a062c2ca7a8422db865292c86a2a9aa
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5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 92351aaa11e1743679f87aebaa0919dee8c903378b819e1ea857fea1f4066c1276485ab0328dc50e63fcdee0dd3ba3bb7fd3160aab4a6b184318ddc0f4d1a219
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7
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+
data.tar.gz: a48f163a2a2498c50971f45f922fe6062bdc698dd06a2a762daed8311a8528c3133800d5a3f3b290da1e22f0454cb59ac66f895a52526cd815230b610b7be96a
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data/lib/bio/nwk/version.rb
CHANGED
data/lib/bio/nwk.rb
CHANGED
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@@ -205,3 +205,10 @@ def getTreeObjFromNwkString(nwk_str)
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205
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end
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208
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+
def getTreeObjFromMcmctree(tree_file)
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first_line = `head -1 #{tree_file}`.chomp
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tree_txt = `tail -1 #{tree_file}`.chomp
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treeio = Bio::Newick.new(tree_txt).tree
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212
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return([first_line, treeio])
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213
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end
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214
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+
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: bio-nwk
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version: !ruby/object:Gem::Version
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4
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-
version: 0.1.
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4
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+
version: 0.1.3
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platform: ruby
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authors:
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- Sishuo Wang
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autorequire:
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bindir: exe
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cert_chain: []
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-
date:
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11
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+
date: 2022-03-14 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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