bio-maf 0.3.2-java → 1.0.0-java
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- data/Gemfile +3 -0
- data/README.md +34 -3
- data/bin/maf_bgzip +56 -0
- data/bin/maf_index +0 -6
- data/bio-maf.gemspec +3 -2
- data/features/bgzf.feature +62 -0
- data/features/maf-indexing.feature +10 -0
- data/features/maf-querying.feature +9 -0
- data/features/step_definitions/convert_steps.rb +1 -1
- data/features/support/env.rb +2 -0
- data/lib/bio/maf/index.rb +35 -13
- data/lib/bio/maf/maf.rb +3 -1
- data/lib/bio/maf/parser.rb +135 -39
- data/lib/bio/maf/writer.rb +4 -4
- data/man/maf_bgzip.1 +101 -0
- data/man/maf_bgzip.1.ronn +85 -0
- data/man/maf_extract.1 +5 -2
- data/man/maf_extract.1.ronn +4 -1
- data/man/maf_index.1 +3 -3
- data/man/maf_index.1.ronn +3 -2
- data/man/maf_tile.1 +5 -2
- data/man/maf_tile.1.ronn +4 -1
- data/man/maf_to_fasta.1 +1 -1
- data/spec/bio/maf/index_spec.rb +7 -0
- data/spec/bio/maf/parser_spec.rb +13 -0
- data/spec/spec_helper.rb +2 -0
- data/test/data/gap-1.kct +0 -0
- data/test/data/mm8.chrM.maf +2421 -0
- data/test/data/mm8.chrM.maf.bgz +0 -0
- data/test/data/mm8_chr7_tiny.kct +0 -0
- data/test/data/mm8_chr7_tiny.maf.gz +0 -0
- data/test/data/mm8_chrM_tiny.kct +0 -0
- metadata +30 -2
data/lib/bio/maf/writer.rb
CHANGED
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@@ -20,8 +20,8 @@ module Bio::MAF
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20
20
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end
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21
21
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22
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def write_header(header)
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23
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-
f.
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24
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-
f.
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+
f.write "##maf #{flatten_vars(header.vars)}\n"
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24
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+
f.write "##{header.alignment_params}\n" if header.alignment_params
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25
25
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end
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26
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27
27
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def write_blocks(blocks)
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@@ -36,8 +36,8 @@ module Bio::MAF
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36
36
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block.sequences.each do |seq|
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37
37
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write_seq(seq, lines)
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38
38
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end
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39
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-
lines << "
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40
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-
f.
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39
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+
lines << "\n"
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40
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+
f.write(lines.join("\n"))
|
|
41
41
|
end
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42
42
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43
43
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def write_seq(s, lines)
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data/man/maf_bgzip.1
ADDED
|
@@ -0,0 +1,101 @@
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1
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+
.\" generated with Ronn/v0.7.3
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2
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+
.\" http://github.com/rtomayko/ronn/tree/0.7.3
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3
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+
.
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4
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+
.TH "MAF_BGZIP" "1" "August 2012" "BioRuby" "BioRuby Manual"
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5
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+
.
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6
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+
.SH "NAME"
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7
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+
\fBmaf_bgzip\fR \- optimally BGZF\-compresses and indexes MAF files
|
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8
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+
.
|
|
9
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+
.SH "SYNOPSIS"
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10
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+
\fBmaf_bgzip\fR [\-d dir] \fImaf\fR \.\.\.
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11
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+
.
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12
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+
.br
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13
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+
\fBmaf_bgzip\fR [\-d dir] \-\-index [\-\-all] \fImaf\fR \.\.\.
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14
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+
.
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15
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+
.br
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16
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+
.
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17
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+
.SH "DESCRIPTION"
|
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18
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+
\fBmaf_bgzip\fR is part of the bioruby\-maf library and compresses Multiple Alignment Format (MAF) files in the Blocked GZip Format (BGZF), enabling efficient random access\. It can optionally index these files as well\.
|
|
19
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+
.
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20
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+
.P
|
|
21
|
+
\fBmaf_bgzip\fR can be used as an import tool to prepare MAF files from an external source such as UCSC for use by the other bioruby\-maf tools\. Such MAF files are often gzipped; these can be handled transparently by \fBmaf_bgzip\fR, without a separate gunzip(1) step\.
|
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22
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+
.
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23
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+
.P
|
|
24
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+
This is a MAF\-specific replacement for the bgzip(1) tool shipped with samtools\. Unlike the output of bgzip(1), each BGZF block (which can be up to 64 KB of uncompressed data) will contain an integer number of MAF blocks, except in the case of MAF blocks larger than 64 KB\. This means that except in unusual cases, a MAF block will be able to be read without having to read more than one BGZF block\.
|
|
25
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+
.
|
|
26
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+
.SH "EXAMPLES"
|
|
27
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+
Compress \fBmm8\.chrM\.maf\fR, creating \fBmm8\.chrM\.maf\.bgz\fR in the current directory:
|
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28
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+
.
|
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29
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+
.IP "" 4
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30
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+
.
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31
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+
.nf
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32
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+
|
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33
|
+
$ maf_bgzip mm8\.chrM\.maf
|
|
34
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+
.
|
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35
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+
.fi
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36
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+
.
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+
.IP "" 0
|
|
38
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+
.
|
|
39
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+
.P
|
|
40
|
+
Re\-compress and index \fBmm8\.chrM\.maf\.gz\fR (on all sequences) into the \fB/data/maf/\fR directory, creating \fB/data/maf/mm8\.chrM\.maf\.bgz\fR and \fB/data/maf/mm8\.chrM\.kct\fR:
|
|
41
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+
.
|
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42
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+
.IP "" 4
|
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43
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+
.
|
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44
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+
.nf
|
|
45
|
+
|
|
46
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+
$ maf_bgzip \-\-dir /data/maf \-\-index \-\-all mm8\.chrM\.maf\.gz
|
|
47
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+
.
|
|
48
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+
.fi
|
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49
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+
.
|
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50
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+
.IP "" 0
|
|
51
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+
.
|
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52
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+
.P
|
|
53
|
+
As above, but with all \fB\.maf\.gz\fR files in the current directory:
|
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54
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+
.
|
|
55
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+
.IP "" 4
|
|
56
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+
.
|
|
57
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+
.nf
|
|
58
|
+
|
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59
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+
$ maf_bgzip \-\-dir /data/maf \-\-index \-\-all *\.maf\.gz
|
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60
|
+
.
|
|
61
|
+
.fi
|
|
62
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+
.
|
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63
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+
.IP "" 0
|
|
64
|
+
.
|
|
65
|
+
.SH "OPTIONS"
|
|
66
|
+
.
|
|
67
|
+
.TP
|
|
68
|
+
\fB\-d\fR, \fB\-\-dir DIR\fR
|
|
69
|
+
The directory to write the compressed MAF files and indexes to\.
|
|
70
|
+
.
|
|
71
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+
.TP
|
|
72
|
+
\fB\-i\fR, \fB\-\-index\fR
|
|
73
|
+
Index the compressed MAF files as by maf_index(1)\.
|
|
74
|
+
.
|
|
75
|
+
.TP
|
|
76
|
+
\fB\-a\fR, \fB\-\-all\fR
|
|
77
|
+
When \fB\-\-index\fR is specified, index all sequences, not just the reference sequence\.
|
|
78
|
+
.
|
|
79
|
+
.SH "FILES"
|
|
80
|
+
The MAF files must be valid and have names ending in \fB\.maf\fR\. They may be gzip\-compressed, in which case their names should end with \fB\.maf\.gz\fR\.
|
|
81
|
+
.
|
|
82
|
+
.P
|
|
83
|
+
The BGZF\-compressed MAF files will be optimally compressed for random access and named with a \fB\.maf\.bgz\fR suffix\.
|
|
84
|
+
.
|
|
85
|
+
.P
|
|
86
|
+
Indexes created will be Kyoto Cabinet databases as created by maf_index(1) and have the \fB\.maf[\.gz]\fR suffix replaced with \fB\.kct\fR\.
|
|
87
|
+
.
|
|
88
|
+
.SH "ENVIRONMENT"
|
|
89
|
+
\fBmaf_bgzip\fR is a Ruby program and relies on ordinary Ruby environment variables\.
|
|
90
|
+
.
|
|
91
|
+
.SH "BUGS"
|
|
92
|
+
None known\.
|
|
93
|
+
.
|
|
94
|
+
.SH "COPYRIGHT"
|
|
95
|
+
\fBmaf_index\fR is copyright (C) 2012 Clayton Wheeler\.
|
|
96
|
+
.
|
|
97
|
+
.SH "SEE ALSO"
|
|
98
|
+
ruby(1), maf_index(1), bgzip(1)
|
|
99
|
+
.
|
|
100
|
+
.P
|
|
101
|
+
BGZF is specified in the SAM/BAM specification: \fIhttp://samtools\.sourceforge\.net/SAM1\.pdf\fR
|
|
@@ -0,0 +1,85 @@
|
|
|
1
|
+
maf_bgzip(1) -- optimally BGZF-compresses and indexes MAF files
|
|
2
|
+
===============================================================
|
|
3
|
+
|
|
4
|
+
## SYNOPSIS
|
|
5
|
+
|
|
6
|
+
`maf_bgzip` [-d dir] <maf> ...<br>
|
|
7
|
+
`maf_bgzip` [-d dir] --index [--all] <maf> ...<br>
|
|
8
|
+
|
|
9
|
+
## DESCRIPTION
|
|
10
|
+
|
|
11
|
+
**maf_bgzip** is part of the bioruby-maf library and compresses
|
|
12
|
+
Multiple Alignment Format (MAF) files in the Blocked GZip Format
|
|
13
|
+
(BGZF), enabling efficient random access. It can optionally index
|
|
14
|
+
these files as well.
|
|
15
|
+
|
|
16
|
+
`maf_bgzip` can be used as an import tool to prepare MAF files from an
|
|
17
|
+
external source such as UCSC for use by the other bioruby-maf
|
|
18
|
+
tools. Such MAF files are often gzipped; these can be handled
|
|
19
|
+
transparently by `maf_bgzip`, without a separate gunzip(1) step.
|
|
20
|
+
|
|
21
|
+
This is a MAF-specific replacement for the bgzip(1) tool shipped with
|
|
22
|
+
samtools. Unlike the output of bgzip(1), each BGZF block (which can be
|
|
23
|
+
up to 64 KB of uncompressed data) will contain an integer number of
|
|
24
|
+
MAF blocks, except in the case of MAF blocks larger than 64 KB. This
|
|
25
|
+
means that except in unusual cases, a MAF block will be able to be
|
|
26
|
+
read without having to read more than one BGZF block.
|
|
27
|
+
|
|
28
|
+
## EXAMPLES
|
|
29
|
+
|
|
30
|
+
Compress `mm8.chrM.maf`, creating `mm8.chrM.maf.bgz` in the current
|
|
31
|
+
directory:
|
|
32
|
+
|
|
33
|
+
$ maf_bgzip mm8.chrM.maf
|
|
34
|
+
|
|
35
|
+
Re-compress and index `mm8.chrM.maf.gz` (on all sequences) into the
|
|
36
|
+
`/data/maf/` directory, creating `/data/maf/mm8.chrM.maf.bgz` and
|
|
37
|
+
`/data/maf/mm8.chrM.kct`:
|
|
38
|
+
|
|
39
|
+
$ maf_bgzip --dir /data/maf --index --all mm8.chrM.maf.gz
|
|
40
|
+
|
|
41
|
+
As above, but with all `.maf.gz` files in the current directory:
|
|
42
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+
|
|
43
|
+
$ maf_bgzip --dir /data/maf --index --all *.maf.gz
|
|
44
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+
|
|
45
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+
## OPTIONS
|
|
46
|
+
|
|
47
|
+
* `-d`, `--dir DIR`:
|
|
48
|
+
The directory to write the compressed MAF files and indexes to.
|
|
49
|
+
|
|
50
|
+
* `-i`, `--index`:
|
|
51
|
+
Index the compressed MAF files as by maf_index(1).
|
|
52
|
+
|
|
53
|
+
* `-a`, `--all`:
|
|
54
|
+
When `--index` is specified, index all sequences, not just the
|
|
55
|
+
reference sequence.
|
|
56
|
+
|
|
57
|
+
## FILES
|
|
58
|
+
|
|
59
|
+
The MAF files must be valid and have names ending in `.maf`. They may
|
|
60
|
+
be gzip-compressed, in which case their names should end with `.maf.gz`.
|
|
61
|
+
|
|
62
|
+
The BGZF-compressed MAF files will be optimally compressed for random
|
|
63
|
+
access and named with a `.maf.bgz` suffix.
|
|
64
|
+
|
|
65
|
+
Indexes created will be Kyoto Cabinet databases as created by
|
|
66
|
+
maf_index(1) and have the `.maf[.gz]` suffix replaced with `.kct`.
|
|
67
|
+
|
|
68
|
+
## ENVIRONMENT
|
|
69
|
+
|
|
70
|
+
`maf_bgzip` is a Ruby program and relies on ordinary Ruby environment
|
|
71
|
+
variables.
|
|
72
|
+
|
|
73
|
+
## BUGS
|
|
74
|
+
|
|
75
|
+
None known.
|
|
76
|
+
|
|
77
|
+
## COPYRIGHT
|
|
78
|
+
|
|
79
|
+
`maf_index` is copyright (C) 2012 Clayton Wheeler.
|
|
80
|
+
|
|
81
|
+
## SEE ALSO
|
|
82
|
+
|
|
83
|
+
ruby(1), maf_index(1), bgzip(1)
|
|
84
|
+
|
|
85
|
+
BGZF is specified in the SAM/BAM specification: <http://samtools.sourceforge.net/SAM1.pdf>
|
data/man/maf_extract.1
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
.\" generated with Ronn/v0.7.3
|
|
2
2
|
.\" http://github.com/rtomayko/ronn/tree/0.7.3
|
|
3
3
|
.
|
|
4
|
-
.TH "MAF_EXTRACT" "1" "
|
|
4
|
+
.TH "MAF_EXTRACT" "1" "August 2012" "BioRuby" "BioRuby Manual"
|
|
5
5
|
.
|
|
6
6
|
.SH "NAME"
|
|
7
7
|
\fBmaf_extract\fR \- extract blocks from MAF files
|
|
@@ -40,6 +40,9 @@ This tool exposes almost all the random\-access functionality of the Bio::MAF::A
|
|
|
40
40
|
A single MAF file can be processed by specifying it with \fB\-\-maf\fR\. Its accompanying index, created by maf_index(1), is specified with \fB\-\-index\fR\. If \fB\-\-maf\fR is given but no index is specified, the entire file will be parsed to build a temporary in\-memory index\. This facilitates processing small, transient MAF files\. However, on a large file this will incur a great deal of overhead; files expected to be used more than once should be indexed with maf_index(1)\.
|
|
41
41
|
.
|
|
42
42
|
.P
|
|
43
|
+
MAF files can optionally be BGZF\-compressed, as produced by bgzip(1) from samtools\.
|
|
44
|
+
.
|
|
45
|
+
.P
|
|
43
46
|
Alternatively, a directory of indexed MAF files can be specified with \fB\-\-maf\-dir\fR; in this case, they will all be used to satisfy queries\.
|
|
44
47
|
.
|
|
45
48
|
.SH "OPTIONS"
|
|
@@ -265,4 +268,4 @@ FASTA description lines are always in the format \fB>source:start\-end\fR\.
|
|
|
265
268
|
\fBmaf_index\fR is copyright (C) 2012 Clayton Wheeler\.
|
|
266
269
|
.
|
|
267
270
|
.SH "SEE ALSO"
|
|
268
|
-
ruby(1), maf_index(1), maf_tile(1)
|
|
271
|
+
ruby(1), maf_index(1), maf_tile(1), bgzip(1)
|
data/man/maf_extract.1.ronn
CHANGED
|
@@ -49,6 +49,9 @@ facilitates processing small, transient MAF files. However, on a large
|
|
|
49
49
|
file this will incur a great deal of overhead; files expected to be
|
|
50
50
|
used more than once should be indexed with maf_index(1).
|
|
51
51
|
|
|
52
|
+
MAF files can optionally be BGZF-compressed, as produced by bgzip(1)
|
|
53
|
+
from samtools.
|
|
54
|
+
|
|
52
55
|
Alternatively, a directory of indexed MAF files can be specified with
|
|
53
56
|
`--maf-dir`; in this case, they will all be used to satisfy queries.
|
|
54
57
|
|
|
@@ -210,4 +213,4 @@ FASTA description lines are always in the format `>source:start-end`.
|
|
|
210
213
|
|
|
211
214
|
## SEE ALSO
|
|
212
215
|
|
|
213
|
-
ruby(1), maf_index(1), maf_tile(1)
|
|
216
|
+
ruby(1), maf_index(1), maf_tile(1), bgzip(1)
|
data/man/maf_index.1
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
.\" generated with Ronn/v0.7.3
|
|
2
2
|
.\" http://github.com/rtomayko/ronn/tree/0.7.3
|
|
3
3
|
.
|
|
4
|
-
.TH "MAF_INDEX" "1" "
|
|
4
|
+
.TH "MAF_INDEX" "1" "August 2012" "BioRuby" "BioRuby Manual"
|
|
5
5
|
.
|
|
6
6
|
.SH "NAME"
|
|
7
7
|
\fBmaf_index\fR \- build and examine MAF indexes
|
|
@@ -22,7 +22,7 @@ In its default mode, \fBmaf_index\fR parses the \fImaf\fR file given as an argum
|
|
|
22
22
|
The index data is stored in binary form, so with the \fB\-\-dump\fR argument, \fBmaf_index\fR can dump out the index data in human\-readable form for debugging\.
|
|
23
23
|
.
|
|
24
24
|
.SH "FILES"
|
|
25
|
-
The \fImaf\fR input file must be a valid MAF file of any length\.
|
|
25
|
+
The \fImaf\fR input file must be a valid MAF file of any length\. It can optionally be BGZF\-compressed, as produced by bgzip(1) from samtools\.
|
|
26
26
|
.
|
|
27
27
|
.P
|
|
28
28
|
The index created is a Kyoto Cabinet TreeDB (B+ tree) database; \fIindex\fR must have a \fB\.kct\fR extension\.
|
|
@@ -104,7 +104,7 @@ $ maf_index \-d chr22\.kct > /tmp/chr22\.dump
|
|
|
104
104
|
\fBmaf_index\fR is copyright (C) 2012 Clayton Wheeler\.
|
|
105
105
|
.
|
|
106
106
|
.SH "SEE ALSO"
|
|
107
|
-
ruby(1), kctreemgr(1)
|
|
107
|
+
ruby(1), kctreemgr(1), bgzip(1)
|
|
108
108
|
.
|
|
109
109
|
.IP "\(bu" 4
|
|
110
110
|
\fIhttps://github\.com/csw/bioruby\-maf/\fR
|
data/man/maf_index.1.ronn
CHANGED
|
@@ -22,7 +22,8 @@ form for debugging.
|
|
|
22
22
|
|
|
23
23
|
## FILES
|
|
24
24
|
|
|
25
|
-
The <maf> input file must be a valid MAF file of any length.
|
|
25
|
+
The <maf> input file must be a valid MAF file of any length. It can
|
|
26
|
+
optionally be BGZF-compressed, as produced by bgzip(1) from samtools.
|
|
26
27
|
|
|
27
28
|
The index created is a Kyoto Cabinet TreeDB (B+ tree) database;
|
|
28
29
|
<index> must have a `.kct` extension.
|
|
@@ -83,7 +84,7 @@ to be set.
|
|
|
83
84
|
|
|
84
85
|
## SEE ALSO
|
|
85
86
|
|
|
86
|
-
ruby(1), kctreemgr(1)
|
|
87
|
+
ruby(1), kctreemgr(1), bgzip(1)
|
|
87
88
|
|
|
88
89
|
* <https://github.com/csw/bioruby-maf/>
|
|
89
90
|
* <http://fallabs.com/kyotocabinet/>
|
data/man/maf_tile.1
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
.\" generated with Ronn/v0.7.3
|
|
2
2
|
.\" http://github.com/rtomayko/ronn/tree/0.7.3
|
|
3
3
|
.
|
|
4
|
-
.TH "MAF_TILE" "1" "
|
|
4
|
+
.TH "MAF_TILE" "1" "August 2012" "BioRuby" "BioRuby Manual"
|
|
5
5
|
.
|
|
6
6
|
.SH "NAME"
|
|
7
7
|
\fBmaf_tile\fR \- synthesize an alignment for a given region
|
|
@@ -99,6 +99,9 @@ The output is generated in FASTA format, with one sequence per species\.
|
|
|
99
99
|
The \fImaf\fR parameter must specify either a Multiple Alignment Format (MAF) file or a directory of such files, with indexes\.
|
|
100
100
|
.
|
|
101
101
|
.P
|
|
102
|
+
MAF files can optionally be BGZF\-compressed, as produced by bgzip(1) from samtools\.
|
|
103
|
+
.
|
|
104
|
+
.P
|
|
102
105
|
The \fIindex\fR must be a MAF index built with maf_index(1)\. This parameter is ignored if the \fImaf\fR parameter is a directory\. It can be omitted if a single MAF file is given, but in this case the entire file will be parsed to build a temporary index\. For large files which will be reused, this is not advisable\.
|
|
103
106
|
.
|
|
104
107
|
.P
|
|
@@ -111,7 +114,7 @@ If \fB\-\-bed\fR \fIbed\fR is specified, its argument must be a BED file\. Only
|
|
|
111
114
|
\fBmaf_tile\fR is copyright (C) 2012 Clayton Wheeler\.
|
|
112
115
|
.
|
|
113
116
|
.SH "SEE ALSO"
|
|
114
|
-
maf_index(1), ruby(1)
|
|
117
|
+
maf_index(1), ruby(1), bgzip(1)
|
|
115
118
|
.
|
|
116
119
|
.IP "\(bu" 4
|
|
117
120
|
\fIhttps://github\.com/csw/bioruby\-maf/\fR
|
data/man/maf_tile.1.ronn
CHANGED
|
@@ -95,6 +95,9 @@ species.
|
|
|
95
95
|
The <maf> parameter must specify either a Multiple Alignment Format
|
|
96
96
|
(MAF) file or a directory of such files, with indexes.
|
|
97
97
|
|
|
98
|
+
MAF files can optionally be BGZF-compressed, as produced by bgzip(1)
|
|
99
|
+
from samtools.
|
|
100
|
+
|
|
98
101
|
The <index> must be a MAF index built with maf_index(1). This
|
|
99
102
|
parameter is ignored if the <maf> parameter is a directory. It can be
|
|
100
103
|
omitted if a single MAF file is given, but in this case the entire
|
|
@@ -116,6 +119,6 @@ variables.
|
|
|
116
119
|
|
|
117
120
|
## SEE ALSO
|
|
118
121
|
|
|
119
|
-
maf_index(1), ruby(1)
|
|
122
|
+
maf_index(1), ruby(1), bgzip(1)
|
|
120
123
|
|
|
121
124
|
* <https://github.com/csw/bioruby-maf/>
|
data/man/maf_to_fasta.1
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
.\" generated with Ronn/v0.7.3
|
|
2
2
|
.\" http://github.com/rtomayko/ronn/tree/0.7.3
|
|
3
3
|
.
|
|
4
|
-
.TH "MAF_TO_FASTA" "1" "
|
|
4
|
+
.TH "MAF_TO_FASTA" "1" "August 2012" "BioRuby" "BioRuby Manual"
|
|
5
5
|
.
|
|
6
6
|
.SH "NAME"
|
|
7
7
|
\fBmaf_to_fasta\fR \- convert MAF file to FASTA
|
data/spec/bio/maf/index_spec.rb
CHANGED
|
@@ -115,6 +115,13 @@ module Bio
|
|
|
115
115
|
@idx.close
|
|
116
116
|
}.not_to raise_error
|
|
117
117
|
end
|
|
118
|
+
it "works from a pipe" do
|
|
119
|
+
IO.popen("cat #{TestData + 'mm8_chr7_tiny.maf'}") do |pipe|
|
|
120
|
+
@p = Parser.new(TestData + 'mm8_chr7_tiny.maf')
|
|
121
|
+
@idx = KyotoIndex.build(@p, '%')
|
|
122
|
+
@idx.db.count.should > 10
|
|
123
|
+
end
|
|
124
|
+
end
|
|
118
125
|
it "accepts .kct paths"
|
|
119
126
|
it "rejects other paths"
|
|
120
127
|
context "mm8_chr7" do
|
data/spec/bio/maf/parser_spec.rb
CHANGED
|
@@ -181,6 +181,12 @@ module Bio
|
|
|
181
181
|
end
|
|
182
182
|
it_behaves_like "any chunk size"
|
|
183
183
|
end
|
|
184
|
+
it "handles a skipped block in a BGZF file" do
|
|
185
|
+
@p = described_class.new(TestData + 'mm8.chrM.maf.bgz')
|
|
186
|
+
blocks = @p.fetch_blocks([[5141084112, 2100],
|
|
187
|
+
[5141087379, 2006]])
|
|
188
|
+
blocks.collect { |b| b.offset }.should == [5141084112, 5141087379]
|
|
189
|
+
end
|
|
184
190
|
after(:each) do
|
|
185
191
|
@p.f.close
|
|
186
192
|
end
|
|
@@ -191,6 +197,13 @@ module Bio
|
|
|
191
197
|
p = described_class.new(TestData + 'mm8_chr7_tiny.maf')
|
|
192
198
|
p.each_block.count.should == 8
|
|
193
199
|
end
|
|
200
|
+
it "works when parsing from a pipe" do
|
|
201
|
+
IO.popen("cat #{TestData + 'mm8_chr7_tiny.maf'}") do |pipe|
|
|
202
|
+
p = described_class.new(pipe)
|
|
203
|
+
p.each_block.count.should == 8
|
|
204
|
+
end
|
|
205
|
+
end
|
|
206
|
+
|
|
194
207
|
end
|
|
195
208
|
|
|
196
209
|
describe "sequence_filter" do
|
data/spec/spec_helper.rb
CHANGED
data/test/data/gap-1.kct
CHANGED
|
Binary file
|
|
@@ -0,0 +1,2421 @@
|
|
|
1
|
+
##maf version=1 scoring=autoMZ.v1
|
|
2
|
+
a score=360695.000000
|
|
3
|
+
s mm8.chrM 0 81 + 16299 GTTAATGTAGCTTAA--TAACAAAGCAAAGCACTGAAAATGCTTAGATG-GATAATTG--TA-TCCCATAAAC-ACAAAGGTTTGGTC
|
|
4
|
+
s galGal2.chrM 1234 75 + 16775 -------TAGCTTAAC-CCACAAAGCATGGCACTGAAGATGCCAAGATGGTACCTACT--AT-ACCTGTGGGC-A-AAAGACTTAGTC
|
|
5
|
+
i galGal2.chrM N 0 C 0
|
|
6
|
+
s oryCun1.scaffold_140182 113 82 + 20791 GTTAATGTAGCTTAA--CAACAAAGCAAAGCACTGAAAATGCTTAGATGAGCCTTCCC--GG-CTCCATAAAC-ATAAAGGTTTGGTC
|
|
7
|
+
i oryCun1.scaffold_140182 N 0 C 0
|
|
8
|
+
s rn4.chrM 2 78 + 16300 --TAATGTAGCTTA---TAATAAAGCAAAGCACTGAAAATGCTTAGATG-GATTCAAA--AA-TCCCATAAAC-ACAAAGGTTTGGTC
|
|
9
|
+
i rn4.chrM N 0 C 0
|
|
10
|
+
s hg18.chrM 578 84 + 16571 GTTTATGTAGCTTACCTCCTCAAAGCAATACACTGAAAATGTTTAGACGGGCTCACAT--CA-CCCCATAAAC-AAATAGGTTTGGTC
|
|
11
|
+
i hg18.chrM N 0 C 0
|
|
12
|
+
s panTro2.chrM 4 80 + 16554 ----ATGTAGCTTACCCCCTCAAAGCAATACACTGAAAATGTTTCGACGGGTTTACAT--CA-CCCCATAAAC-AAACAGGTTTGGTC
|
|
13
|
+
i panTro2.chrM N 0 C 0
|
|
14
|
+
s rheMac2.chr14 30986862 84 - 133002572 GTTAATGTAGCTTAATTATTTACAGCAAGACATTGAAAATGTCTAGATGGGATTACAC--AA-CCCTATAAAC-AGATAAATTTGGTC
|
|
15
|
+
i rheMac2.chr14 N 0 N 0
|
|
16
|
+
s bosTau2.chrM 363 80 + 16338 GTTGATGTAGCTTAAC-C--CAAAGCAAGGCACTGAAAATGCCTAGATG-AGTCTCCC--AA-CTCCATAAAC-ACATAGGTTTGGTC
|
|
17
|
+
i bosTau2.chrM N 0 C 0
|
|
18
|
+
s canFam2.chrM 2 80 + 16727 --TAATGTAGCTTAAT-TAATAAAGCAAGGCACTGAAAATGCCAAGATG-AGTCGCAC--GA-CTCCATAAAC-ATAAAGGTTTGGTC
|
|
19
|
+
i canFam2.chrM N 0 C 0
|
|
20
|
+
s dasNov1.scaffold_23239 3802 82 - 16977 GTCAACGTAGCTTAA--GTCTAAAGCGAGGCACTGAAAATGCCTAAACGAATCCTAAT--GA-TTCCGCAGAC-ACACAGGTCTGGTC
|
|
21
|
+
i dasNov1.scaffold_23239 N 0 C 0
|
|
22
|
+
s loxAfr1.scaffold_36650 3007 83 + 16266 GTTAATGTAGCTTAA--AACAAAAGCAAGGTACTGAAAATACCTAGACGAGTATATCC--AA-CTCCATAAACAACAAAGGTTTGGTC
|
|
23
|
+
i loxAfr1.scaffold_36650 N 0 C 0
|
|
24
|
+
s echTel1.scaffold_49882 260 78 - 7170 GTTAATGTAGCTTAA--TA-AAAAGTGAGGCACTGAAAATGCCTAGATGAGTAT---T--AA-CTCCATAAAC-ATAAAGGTTTGGTT
|
|
25
|
+
i echTel1.scaffold_49882 N 0 C 0
|
|
26
|
+
s monDom4.chrUn 117151420 82 + 174229318 GTTGATGTAGCTTAA--CTTAAAAGCAAAGCACTGAAAATGCTTAGATG-GTTTATACTAAA-ACCCATAAAC-A-AAAGGTTTGGTC
|
|
27
|
+
i monDom4.chrUn N 0 C 0
|
|
28
|
+
s tetNig1.chrUn_random 103509752 81 + 171761319 GCTAGTGTAGCTTAA--TA--AAAGCATAACACTGAAGATGTTAAGATGGGCCCTAGA--AAGCCCCACAGGC-ACAAAGGCTTGGTC
|
|
29
|
+
i tetNig1.chrUn_random N 0 C 0
|
|
30
|
+
s fr1.chrUn 320907090 81 + 349519338 GCTAGCGTAGCTTAA--CC--AAAGCAGAGTACTGAAGATGCTAAGATGGGCCCTGAA--AAGTCCCGCAGGC-ACAAAAGCTTGGTC
|
|
31
|
+
i fr1.chrUn N 0 C 0
|
|
32
|
+
s danRer4.chrM 950 82 + 16596 GCTAGCGTAGCTTAA--AA-TAAAGCACGGCACTGAAGCTGCCAAGATGGGCCCTAAT--AAGCTCCGCATGC-ACAAAGGCATGGTC
|
|
33
|
+
i danRer4.chrM N 0 C 0
|
|
34
|
+
|
|
35
|
+
a score=1709796.000000
|
|
36
|
+
s mm8.chrM 81 379 + 16299 CTGGCCTTATAATTAATTAGAGGTAAAATTACACATGCAAACCTCCATAGACCGGTGTAA-AATCCCTTAAACATTT-ACTTA--------AAATTTAAGGAGAGGGTATCAAGCACAT--------TAA--AATAGCTTAAGACACCTTGCCT-AGCCACACCCCCACGGG-ACTCAGCAGTGATAAATATTAAGCAATAAACG---AAAGTTTGACTAAGTTA-TACCT---C-TTAGGGTT-GGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAAT-TATCTT-CGGCGTAAAACGTGTCAACT----ATAAATAAATA-----AATAGAATTAAAATCCAACTTA-TATGT-GAAAATTCATTGTTAGGACCT-AAACTCAATAACGAAAGTAATTCT----AGTCA---------TT
|
|
37
|
+
s oryCun1.scaffold_140182 195 382 + 20791 CTGGCCTTTTTATTGTTTTGTAGCAACCTTACACATGCAAGACTCCTCACGCCAGTG-AG-AATGCCCTTAACATCA-AACTA--------GATCAAGAGGAGCGGACATTAAGCACAC--------TAATCAGTAGCTCAAGATGCCTTGCTT-AACCACACCCCCAAGGG-ATACAGCAGTGATAAATATTTAGCAATGAACG---TAAGTTTGACTAAGTTA-TGCTA---CTTTAGGGTT-GGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAATAAATATC-CGGCGTAAAGCGTGATTAGA----ATAAACAACAA-----AATAAAATCAAATAACAACTAA-GCTGT-AAAAAGTAATAGTTGCAAACA-AAAATAAACAACGAAAGTGATTTT----ATACT---------CT
|
|
38
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
39
|
+
s rn4.chrM 80 379 + 16300 CTGGCCTTATAATTAATTGGAGGTAAGATTACACATGCAAACATCCATAAACCGGTGTAA-AATCCCTTAAAGATTT-GCCTA--------AAACTTAAGGAGAGGGCATCAAGCACAT---------AA--TATAGCTCAAGACGCCTTGCCT-AGCCACACCCCCACGGG-ACTCAGCAGTGATAAATATTAAGCAATGAACG---AAAGTTTGACTAAGCTAGTACCT---C-TCAGGGTT-GGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAAT-TATTTT-CGGCGTAAAACGTGCCAACT----ATAAATCTCAT-----AATAGAATTAAAATCCAACTTA-TATGT-GAAAATTCATTGTTAGGACCT-AAGCCCAATAACGAAAGTAATTCT----AATCA---------TT
|
|
40
|
+
i rn4.chrM C 0 C 0
|
|
41
|
+
s hg18.chrM 662 382 + 16571 CTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTG-AG-TTCACCCTCTAAATC--ACCAC--------GATCAAAAGGGACAAGCATCAAGCACGCAG------CAA--TGCAGCTCAAAACGCTTAGCCT-AGCCACACCCCCACGGG-AAACAGCAGTGATTAACCTTTAGCAATAAACG---AAAGTTTAACTAAGCTA-TACTAAC-C-CCAGGGTT-GGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACCCAAGTCAAT-AGAAGC-CGGCGTAAAGAGTGTTTTAG----ATCACCCCCTC--CCCAATAAAGCTAAAACTCACCTGA-GTTGT-AAAAAACTCCAGTT--GACAC-AAAATAGACTACGAAAGTGGCTTT----AACAT---------AT
|
|
42
|
+
i hg18.chrM C 0 C 0
|
|
43
|
+
s panTro2.chrM 84 376 + 16554 CTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGCCCC-GTG-AG--TCACCCTCTAAATC--GCCAT--------GATCAAAAGGAACAAGTATCAAGCACGCAG------CAA--TGCAGCTCAAAACGCTTAGCCT-AGCCACACCCCCACGGG-AGACAGCAGTGATAAACCTTTAGCAATAAACG---AAAGTTTAACTAAGCCA-TACTAAC-C-TCAGGGTT-GGTCAATTTCGTGCTAGCCACCGCGGTCATACGATTAACCCAAGTCAAT-AGAAAC-CGGCGTAAAGAGTGTTTTAG----ATCACCCCCCC------ATAAAGCTAAAATTCACCTGA-GTTGT-AAAAAACTCCAGCT--GATAC-AAAATAAACTACGAAAGTGGCTTT----AACAC---------AT
|
|
44
|
+
i panTro2.chrM C 0 C 0
|
|
45
|
+
s rheMac2.chr5 34435460 378 - 182086969 ctgGCCTTTTCCTTAGCTCTTAGTAGGATTACACATGCAAGCATCCCCACCCCAGTG-AAAAATGCCCTCTAGATC--ACCG---------GATCAAAAGGAGCAGGTATCAAGCATGCAT------GAA--TGCACCTCAAAACACTTTGCTC-AACCACACCCCCACGGG-AAACAGCAGTGATAAATCCTTAGTAATAAATG---GAAGTTTGACCAAGCCA-TACTAATAT-TTAGGGTT-GGTTAATTTCGTGCCAGTCA-CGTGGCCATAAGATTAACCCAAGCTAAT-AGAACT-TGGCGTAAAGAATGTTTAAG----GTCTACCCTCA------ATAAAGCTAAACTCCATTTAA-GCTGTAAAAAAACTCCAGCT--GAAAT-AAAATATACTACAAAAGTGGCTTT----AATAT----------C
|
|
46
|
+
i rheMac2.chr5 N 0 C 0
|
|
47
|
+
s bosTau2.chrM 443 376 + 16338 CCAGCCTTCCTGTTAACTCTTAATAAACTTACACATGCAAGCATCTACACCCCAGTG-AG-AATGCCCTCTAGGTT--ATTAA--------AACTAAGAGGAGCTGGCATCAAGCACACAC------CC---TGTAGCTCACGACGCCTTGCTT-AACCACA-CCCCACGGG-AAACAGCAGTGACAAAAATTAAGCCATAAACG---AAAGTTTGACTAAGTTA-TATTA---A-TTAGGGTT-GGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAGCTAAC-AGGAGTACGGCGTAAAACGTGTTAAAG----CACCATACCAA------ATAGGGTTAAATTCTAACTAA-GCTGT-AAAAAGCCATGATT--AAAATAAAAATAAATGACGAAAGTGACCCT----ACAAT---------AG
|
|
48
|
+
i bosTau2.chrM C 0 C 0
|
|
49
|
+
s canFam2.chrM 82 378 + 16727 CTAGCCTTCCTATTAGTTTTTAGTAGACTTACACATGCAAGCCTCCACGCCCCAGTG-AG-AATGCCCTTAAAATC--ACCAG-------TGATCTAAAGGAGCAGGTATCAAGCACACTC------TTA--AGTAGCTCATAACACCTTGCTA-AGCCACACCCCCACGGG-ATACAGCAGTGATAAAAATTAAGCCATAAACG---AAAGTTTGACTAAGCCA-TACTA---A-ATAGGGTT-GGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAAT-AGGCCTACGGCGTAAAGCGTGTTCAAG----ATACTTTTACA------CTAAAGTTAAAACTTAACTAA-GCCGT-AAAAAGCTACAGTT--ATCAT-AAAATAAACCACGAAAGTGACTTT----ATAAT---------AA
|
|
50
|
+
i canFam2.chrM C 0 I 1
|
|
51
|
+
s dasNov1.scaffold_23239 3884 386 - 16977 CTAGCCTTACTATTAATTCATAACAAAATTACACATGCAAGTATCAGCACACCAGTG-AG-AATGCCCTCTAACTC--TTATA--------GATCAAAAGGAGCAAGCATCAAGTACACACAGCCCTTAC--AGTAGCTCATAACGCTTTGCTC-AACCACACCCCCACGGG-ATACAGCAGTGATAAAAATTAAGCAATAAGCG---AAAGCTTGACTAAGTTA-TGTTATT-A-TAAGGGTT-GGTAAATTTCGTGCCAGCAACCGCGGTCATACGATTAACCCAAATTAAT-AGTTAT-CGGCGTAAAGCGTGTTTAAG----ACACCTAGACA------ATAGAGTTAAACCCTTACTAC-GCTGT-AAAAAGCCTTAGTAGGACCAT-AAACCCTTCAACGAAAGTGACTCT----AATTT---------AT
|
|
52
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
53
|
+
s loxAfr1.scaffold_36650 3090 383 + 16266 CCGGCCTTCTTATTGGTTACTAGGAAACTTATACATGCAAGTATCCGCCCGCCAGTG-AA-TACGCCTTCTAAATC--ATCAC-------CGATCAAAGAGAGCTGGCATCAAGCACACAC---TCTAAG--TGTAGCTCATGACGTCTCGCCT-AGCCACACCCCCACGGG-AAACAGCAGTAGTAAATATTTAGCAATTAACA---AAAGTTAGACTAAGTTA-TCCTAA--T-AAAGGACT-GGTCAATTTCGTGCCAGCAACCGCGGCCATACGATTAGTCCAAATTAAT-AAGCATACGGCGTAAAGCGTATCAGAA----GAATTAAGAAA------ATAAAGTTAAATCTTATACTA-GCTGT-TTAAAGCTCAAGATAAGACAT-A-AATAACCTACGAAAGTGACTTT----AATAA---------TC
|
|
54
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
55
|
+
s echTel1.scaffold_49882 338 378 - 7170 CTAGCCTTTTTATTAGTTCTTAATAAAATTATACATGCAAGTATCCACCCCCCAGTG-AA-AATGCCCTTAAACTT--ACTTA-------TAATTAAGAGGAGCAGGTATCAAGCACA-------CTTAA--TGTAGCTCACAACACCTTGCTA-AGCCACACCCTCACGGG-ACACAGCAGTAATAAAAATTAAGCAATTAACG---GAAGTTTGACTTAGTTA-TATTAT--T-TAATTAGTCGGTCAACTTCGTGCCAGCCACCGCGGTCATACGAAGGACTTGAACTAAT-AAATAC-CGGCGTAAAGCGTGATTAAG----ATCTTTAAACA------ATAAAACAAAAAC-TATTCTATGCCGT-AAAAAGCC--AGAGAATACTT-ATAATAAATAACGAAGGTAATTTT----ATAAT---------TT
|
|
56
|
+
i echTel1.scaffold_49882 C 0 C 0
|
|
57
|
+
s monDom4.chrUn 117151502 391 + 174229318 CTAGCCTTCTTGTTAATTTTAATTAGACCTACACATGCAAGTTTCCGCTGCCCTGTG-AG-AATGCCCTCAAAACT--ACTCAATTCTCCAAGATAAGAGGAGCTGGTATCAGGCACACAC------TACT-AGTAGCCAACTACACCTTGCTC-AACCACACCCCCACGGG-AAACAGCAGTGATTAAAATTAAGCTATAAACG---AAAGTTTGACTAAATCA-TAGTTAT-C-TAAGGGTT-GGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAAC-AAGCCTCCGGCGTAAAGCGTGTCCAAA----CAAAAGACTAA----TAATAAAGTTAATACTTAACTAA-GTTGT-AACACACTCCAGTTA-ATACT-AAGATAAACTATTAAAATAACTTT----AATAA---------AG
|
|
58
|
+
i monDom4.chrUn C 0 C 0
|
|
59
|
+
s galGal2.chrM 1309 395 + 16775 CTAACCTTTCTATTGGTTTTTGCTAGACATATACATGCAAGTATCCGCATCCCAGTG-AA-AATGCCCCCAAACCT--TTCTT-----CCCAAGCAAAAGGAGCAGGTATCAGGCACACTC------AGC--AGTAGCCCAAGACGCCTTGCTTAAGCCACACCCCCACGGGTACTCAGCAGTAATTAACCTTAAGCAATAAGTG---TAAACTTGACTTAGCCA-TAGCAA--C-CCAGGGTT-GGTAAATCTTGTGCCAGCCACCGCGGTCATACAAGAAACCCAAATCAAT-AGCTACCCGGCGTAAAGAGTGGCCACATGTTATCTGCACCAG------CTAAGATTAAAATGCAACCAA-GCTGT-CATAAGCCTAAGATC-CACCT-AAACCCAAC--CCAAATCCATCTT----AGCCTCAACGATTAAT
|
|
60
|
+
i galGal2.chrM C 0 C 0
|
|
61
|
+
s xenTro2.scaffold_18005 958 384 + 3405 CCAGCCTTGTCATCAACTTTATCTGAACTTACACATGCAAGCATCCGCATTCCCGTG-AA-AATGCCCTTAAGCCC--CTAAA-----ACAGAGGATAAGGAGCCGGTATCAGGCACGACC-----------ATCAGCCCACGACACCTTGCTA-TGCCACACCCACAAGGGAACTCAGCAGTGATAAACATTGAAC-ATGAGCGATTAAAGCTCGACTCAGTTA-CAGAT---A-ACAGAGTT-GGTCAATCTCGTGCCAGCCGCCGCGGTTATACGAGAAACTCAAGTTGAT-AATTCA-CGGCGTAAAGCGTGATTAAG----GTTCACCCTCA------CTAGAGTCAAACCCTAGCTAA-GCTGT-CGCACGCTTTCGCTA-GACTG-AAGAACACTAACGAAAGTAACTCTACCCAACAT---------AC
|
|
62
|
+
i xenTro2.scaffold_18005 N 0 C 0
|
|
63
|
+
s tetNig1.chrUn_random 103509833 382 + 171761319 CTGACTTTACTAACAGCTCTAGCCAAACTTACACATGCAAGTATCCGCACCCCCGTG-AG-AATGCCCTACACACCC-TGCCC--------GGGAATTAGGAGCCGGTATCAGGCACAC-C------CCT--CGTAGCCCATGACGCCTTGCTT-AGCCACACCCCCAAGGGAACTCAGCAGTGATAAACATTAAGCCATAAGTG---AAAACTTGACTTAGCTA-CGGCT---T-AGAGGGCC-GGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGACCCAAGTTGTT-AGCCCC-CGGCGTAAAGAGTGGTTAAA----ACACCAAACAC--CAAACTGAGGCCGAACGCCCTCAAG-GCAGT-TATACGCTCCCGAGG-ACATG-AAGGACAATTACGAAGGTAGCCTC----ACCCC---------CT
|
|
64
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
65
|
+
s fr1.chrUn 320907171 383 + 349519338 CTGACTTTACTAACAACTCTGATCAAACTTACACATGCAAGTATCCGCATCCCAGTG-AA-AATGCCCCCCGCCCCC-CGTCC--------GGAAATAGGGAGTTGGTATCAGGCACACAA------ATT--TGTAGCCCATGACACCTAGCTT-TGCCACGCCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTG---AAAACTTGACTTAGTCA-TGATC---T-AAAGAGTC-GGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGACCCAAGTTGTT-AGCCAA-CGGCGTAAAGGGTGGTTAGA----ACTAAAAACAA--CAAACTGAGACCGAACACCTTCAAG-GCTGT-TATACGCTTCCGAAG-CAACG-AAGAACAATAACGAAAGTAGCCTC----ACTAA---------CT
|
|
66
|
+
i fr1.chrUn C 0 N 0
|
|
67
|
+
s danRer4.chrM 1032 378 + 16596 CCGACCTTTTGATCAGCTTTTACCTAATTTACACATGCAAGTCTCCGCACCCCTGTG-AA-TACGCCCTCAATCCCCAAACCT--------GGGGACGAGGAGCAGGTATCAGGCACAA-A------ATT--TTTAGCCCAAGACGCCTAGCCA-AGCCACACCCCCAAGGGGATCCAGCAGTGACAAACATTAAGCTATAAGTG---AAAACTTGACTCAGTTA-AGGTA---A-AGAGAGCC-GGTAAAACTCGTGCCAGCAACCGCGGTTAAACGAGAGGCTCTAGTTGAT-ATACTA-CGGCGTAAAGGGTGGTTAAG---------GAACAATGTAAAATAAAGCCAAACGGCCCTTTA-ACTGT-TATACGCTTTTAGAT-GCTAG-AGGCCCAAACACGAAAGTAGCTTT----A--AA---------TT
|
|
68
|
+
i danRer4.chrM C 0 I 6
|
|
69
|
+
|
|
70
|
+
a score=1731261.000000
|
|
71
|
+
s mm8.chrM 460 260 + 16299 TATA--ATACACGACAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCATAAACCTAAATAATTAAATTTAACA-AAAC-TATTTGCCAGAGAACTACTAG--CCATAGCTTAAAACTCAAAGGACT---TGGCGGTACTTTATATCCATCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGCTCTACCTCACCATCTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTAA--AAAGGTATTAAAGT
|
|
72
|
+
s oryCun1.scaffold_140182 577 256 + 20791 TCGA--ACTCACGATAGCTAAGGCCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACTTTGATAATTTCA--TAACA-AAAT-TATTCGCCAGAGAACTACAAG--CCAAAGCTTAAAACTCAAAGGACT---TGGCGGTGCTTTATACCCACCTAGAGGAGCCTGTTCCGTAATCGATAAACCCCGATAAACCTTACCACTCTTTGCCAACTCAGCCTATATACCGCCATCTTCAGCGA--CCTAA--AAAGGAGAAAAAGT
|
|
73
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
74
|
+
s rn4.chrM 459 261 + 16300 TATATAATGCACGATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTTAATAATTAAACCTA-CA-AAAT-TATTTGCCAGAGAACTACTAG--CTACAGCTTAAAACTCAAAGGACT---TGGCGGTACTTTATATCCATCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGTTCTACCTTACCCCTTCTCGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTAA--AAAGGCACTAAAGT
|
|
75
|
+
i rn4.chrM C 0 C 0
|
|
76
|
+
s hg18.chrM 1044 256 + 16571 CTGA--ACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAA-TCAACA-AAAC-TGCTCGCCAGAACACTACGAG--CCACAGCTTAAAACTCAAAGGACC---TGGCGGTGCTTCATATCCCTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCTTGC----TCAGCCTATATACCGCCATCTTCAGCAAACCCTGA-TGAAGGCTACAAAGT
|
|
77
|
+
i hg18.chrM C 0 C 0
|
|
78
|
+
s panTro2.chrM 460 256 + 16554 CTGA--ATACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACTTCAACAGTTAAA-TTAACA-AAAC-TGCTCGCCAGAACACTACGAG--CCACAGCTTAAAACTCAAAGGACC---TGGCGGTGCTTCATATCCCTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCGCCTCTTGC----TCAGCCTATATACCGCCATCTTCAGCAAACCCTGA-TGAAGGTTACAAAGT
|
|
79
|
+
i panTro2.chrM C 0 C 0
|
|
80
|
+
s rheMac2.chr5 34435838 239 - 182086969 CTGA--AGACACAATAGCTAAGATCGAAACTTGGATTAGATACCCCACTATGCTCAGCTCTAAACTCTAATAGTTAGA-TTAACA-AAAC-CACTCGCCAGAGTACTACAAG--AAACAGCTGAAAACTCAAAGGACT---TGGTGGTGCTTTATATCCCCCTAGAGGAGCCTGTTCTAT-ATTGATAAACCCTGATGCACCTCAGTACCTCTTGCCA--CCAGCCTATATACCGCCATCTTCAGCAAACCC-------------------
|
|
81
|
+
i rheMac2.chr5 C 0 I 233
|
|
82
|
+
s bosTau2.chrM 819 258 + 16338 CCGA--C-GCACTATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACACAGATAATTACA-TAAACA-AAAT-TATTCGCCAGAGTACTACTAG--CAACAGCTTAAAACTCAAAGGACT---TGGCGGTGCTTTATATCCTTCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGATAAACCTCACCAATTCTTGCTAATACAGTCTATATACCGCCATCTTCAGCAAACCCTAA--AAAGGAAAAAAAGT
|
|
83
|
+
i bosTau2.chrM C 0 C 0
|
|
84
|
+
s canFam2.chrM 461 258 + 16727 CTGA--CTACACGATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACATAGATAATTTTA-C-AACA-AAAT-AATTCGCCAGAGGACTACTAG--CAATAGCTTAAAACTCAAAGGACT---TGGCGGTGCTTTATATCCCTCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGATAAACCTCACCACCTTTCGCTAATTCAGTCTATATACCGCCATCTTCAGCAAACCCTCA--AAAGGTAGAACAGT
|
|
85
|
+
i canFam2.chrM I 1 C 0
|
|
86
|
+
s dasNov1.scaffold_23239 4270 258 - 16977 CTGA--CTACACGATAGCTAGGACCCAAACTGGGATTAGATACCCCACTATGCCTAGCCCTAAACTAAAACAGTT-CA-CAAACA-AAAC-TGTTCGCCAGAGTACTACTAG--CAACAGCTTAAAACTCAAAGGACT---TGGCGGTGCTTTACATCCTTCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGATATACCTCACCACCCCTTGCTAATACAGCCTATATACCGCCATCTTCAGCAGACCCTAG--TAAGGCACCACAGT
|
|
87
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
88
|
+
s loxAfr1.scaffold_36650 3473 259 + 16266 CTAA--ACATACGATAGCTAGGGTACAAACTGAGATTAGATACCTCACTATGCCTAGCCCTAAACTTTGATAGCTACC-TTTACA-AAGC-TATCCGCCAGAGAACTACTAG--CCAGAGCTTAAAACTTAAAGGACT---TGGCGGTGCTTTATATCCACCTAGGGGAGCCTGTCTCGTAACCGATGAACCCCGATATACCTTACCGTCACTTGCTAATTCAGTCCATATACCACCATCTTCAGCAAACCCCTA--TAGGGCACAAAAGT
|
|
89
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
90
|
+
s echTel1.scaffold_49882 716 260 - 7170 CTGA--ACCCACGATAGCTAAGAAACAAACTGGGATTAGATACCCCACTATGCTTAGCCTTAAACCTAGATAGT--CT-ATAACA-AGACATATCCGCCAGAGAACTACTAG---CAAAGCTAAAAACTTAAAGAACTCTGTGGCGGTGCTTCACACCCACCTAGAGGAGCCTGTTATGTAATTGATACACCCCACTAAACCCTACCACCACTTGCTAAGTCAGTCTATATACCGCCATCCTCAGCAAAACCCCA--AAAGGCATATCAGT
|
|
91
|
+
i echTel1.scaffold_49882 C 0 C 0
|
|
92
|
+
s monDom4.chrUn 117151893 257 + 174229318 CTGA---TACACGAAAACTAAGGTACAAACTGGGATTAGATACCCCACTATGCTTAGTCATAAACCAAAGTAGTTAGA--TAACA-AAAC-TACTCGCCAGAGAACTACTAG--CTACTGCTTAAAACTCAAAGGACT---TGGCGGTGCCCTAAACCCACCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGATATACCCAACCCCATCTTGCCAATACAGCCTATATACCGCCATCGTCAGCCCACCTTAA--AAAAGATACAAAGT
|
|
93
|
+
i monDom4.chrUn C 0 C 0
|
|
94
|
+
s galGal2.chrM 1704 263 + 16775 TTTA--ACCCACGAAAGCTAGGACCCAAACTGGGATTAGATACCCCACTATGCCTAGCCCTAAATCTAGATACCTCCC-ATCACA-CATG-TATCCGCCTGAGAACTACGAGCACAAACGCTTAAAACTCTAAGGACT---TGGCGGTGCCCCAAACCCACCTAGAGGAGCCTGTTCTATAATCGATAATCCACGATTCACCCAACCACCCCTTGCCAGCACAGCCTACATACCGCCGTCGCCAGCCCACCTCTAATGAAAGAACAACAGT
|
|
95
|
+
i galGal2.chrM C 0 C 0
|
|
96
|
+
s xenTro2.scaffold_18005 1342 254 + 3405 CTGA--ACTCACGACCGCTAGGAAACAAACTGGGATTAGATACCCCACTATGCCTAGCCTTAAACCTTGAC-----CA-ATTACA-CTTC-AATCCGCCAGGGAACTACGAG--CCCAAGCTTAAAACCCAAAGGACT---TGGCGGTGCCCCAAACCCACCTAGAGGAGCCTGTTCTATAATCGATACCCCCCGCTTAACCTCACCACTTCTTGCCAAACCCGCCTATATACCACCGTCGCCAGCCCACCCCGT--GAGGGGACACAAGT
|
|
97
|
+
i xenTro2.scaffold_18005 C 0 C 0
|
|
98
|
+
s tetNig1.chrUn_random 103510215 258 + 171761319 TTGA--ACCCACGAAAGCTAGGGTACAAACTGGGATTAGATACCCCACTATGCCTAGCCCTAAACAATGATATTCTAA---TACATTCCT-TATCCGCCCGGGTACTACGAG--CATTAGCTTAAAACCCAAAGGACT---TGGCGGTGCTTTAAACCCATCTAGAGGAGCCTGTTCTAGAACCGATAATCCCCGTTAAACCTCACCCCTTCTTGTCTAATCCGCCTATATACCACCGTCGTCAGCCTACCCTGT--GAAGGACTAACAGT
|
|
99
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
100
|
+
s danRer4.chrM 1416 257 + 16596 CTGA--ACCCACGAAAGCTAAGAAACAAACTGGGATTAGATACCCCACTATGCTTAGCCATAAACAAAGACATTTAAT---CACA-ACAA-TGTTCGCCCGGACACTACAAG--CATAAGCTTAAAACCCAAAGGACC---TGACGGTGCCTTAGATCCCCCTAGAGGAGCCTGTTCTAGAACCGATTATCCCCGTTAAACCTCACCATTTCTAGCAAAATCAGCCTATATACCACCGTCGCCAGCTTACCCTGT--GAAGGAATAACAGT
|
|
101
|
+
i danRer4.chrM I 6 C 0
|
|
102
|
+
|
|
103
|
+
a score=-15759.000000
|
|
104
|
+
s mm8.chrM 720 22 + 16299 AAGCAAAAGAAT---------------------------------CAAACAT-------------------------------------------------------------AAA
|
|
105
|
+
s oryCun1.scaffold_140182 833 20 + 20791 AAGCTCAATTA----------------------------------CTACCGT--------------------------------------------------------------AA
|
|
106
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
107
|
+
s rn4.chrM 720 21 + 16300 AAGCACAAGAA----------------------------------CAAACAT-------------------------------------------------------------AAA
|
|
108
|
+
i rn4.chrM C 0 C 0
|
|
109
|
+
s hg18.chrM 1300 21 + 16571 AAGCGCAAGTA----------------------------------CCCACGT-------------------------------------------------------------AAA
|
|
110
|
+
i hg18.chrM C 0 C 0
|
|
111
|
+
s panTro2.chrM 716 21 + 16554 AAGCACAAGTA----------------------------------CCCACGT-------------------------------------------------------------AAA
|
|
112
|
+
i panTro2.chrM C 0 C 0
|
|
113
|
+
s rheMac2.chr5 34436310 116 - 182086969 aagcaggagaatggcgtgaacccgggaggtggagcttgcagtgagcccagatcaggccactgtagtccagcctgggcaacagagtgagactctgtctcaaaaaacaaaaaacaaaa
|
|
114
|
+
i rheMac2.chr5 I 233 C 0
|
|
115
|
+
s bosTau2.chrM 1077 22 + 16338 AAGCGTAATTAT---------------------------------GATACAT-------------------------------------------------------------AAA
|
|
116
|
+
i bosTau2.chrM C 0 C 0
|
|
117
|
+
s canFam2.chrM 719 22 + 16727 AAGCACAATCAT---------------------------------TTTACAT-------------------------------------------------------------AAA
|
|
118
|
+
i canFam2.chrM C 0 C 0
|
|
119
|
+
s dasNov1.scaffold_23239 4528 21 - 16977 GAGCACAATAA----------------------------------CATACAT-------------------------------------------------------------AAA
|
|
120
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
121
|
+
s loxAfr1.scaffold_36650 3732 22 + 16266 GAGCTTAATCAT---------------------------------AACCCAT-------------------------------------------------------------GAA
|
|
122
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
123
|
+
s echTel1.scaffold_49882 976 22 - 7170 AAGCATAATGAT---------------------------------AAGACAT-------------------------------------------------------------AAA
|
|
124
|
+
i echTel1.scaffold_49882 C 0 I 1561
|
|
125
|
+
s monDom4.chrUn 117152150 23 + 174229318 AAGCAAAATTATT--------------------------------TTTTCAT-------------------------------------------------------------AAA
|
|
126
|
+
i monDom4.chrUn C 0 C 0
|
|
127
|
+
s galGal2.chrM 1967 22 + 16775 GAGCTCAATAGC---------------------------------CCCTCGC-------------------------------------------------------------TAA
|
|
128
|
+
i galGal2.chrM C 0 C 0
|
|
129
|
+
s xenTro2.scaffold_18005 1596 22 + 3405 AGGCTCAATGAT---------------------------------CAAACAT-------------------------------------------------------------CAA
|
|
130
|
+
i xenTro2.scaffold_18005 C 0 C 0
|
|
131
|
+
s tetNig1.chrUn_random 103510473 22 + 171761319 AGGCAAAGTTGG---------------------------------CACAGCC-------------------------------------------------------------CAA
|
|
132
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
133
|
+
s danRer4.chrM 1673 22 + 16596 AAGCAAGATGGG---------------------------------CATAGCC-------------------------------------------------------------CAG
|
|
134
|
+
i danRer4.chrM C 0 C 0
|
|
135
|
+
|
|
136
|
+
a score=558754.000000
|
|
137
|
+
s mm8.chrM 742 124 + 16299 AACGTTAGGTCAAGGTGTAGCCAATGAAATGGGAAGAAATGGGCTACATTTTCT---TA-TA--AAAGAACATT-----ACTATACCCTTT--ATGAAA----CTAAAG--GACTAAGGAGGATTTAGTAGTAAATTAAGAAT-
|
|
138
|
+
s oryCun1.scaffold_140182 853 123 + 20791 AACGTTAGGTCAAGGTGTAGCTCATAGAGTGAGA--GCATGGGCTACATTTTCT---AC-TT---CAGAATATA-----CGAATTGCCCTT--ATGAAAC--TCTAAGG--GCCAAAGGAGGATTTAGTAGTAAATTAAGAAT-
|
|
139
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
140
|
+
s rn4.chrM 741 125 + 16300 AACGTTAGGTCAAGGTGTAGCCAATGAAGCGGAAAGAAATGGGCTACATTTTCT---TT-TCCCAGAGAACATT-----ACGA-AACCTTT--ATGAAA----CTAAAG--GACAAAGGAGGATTTAGTAGTAAATTAAGAAT-
|
|
141
|
+
i rn4.chrM C 0 C 0
|
|
142
|
+
s hg18.chrM 1321 124 + 16571 GACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTCT---AC-CC---CAGAAAACT-----ACGATAGCCCTT--ATGAAAC---TTAAGG--GTCGAAGGTGGATTTAGCAGTAAACTGAGAGT-
|
|
143
|
+
i hg18.chrM C 0 C 0
|
|
144
|
+
s panTro2.chrM 737 124 + 16554 GACGTTAGGTCAAGGTGTAGCCTATGAGGTGGCAAGAAATGGGCTACATTTTCT---AC-CC---CAGAAAATT-----ACGATAACCCTT--ATGAAAC---CTAAGG--GTCAAAGGTGGATTTAGCAGTAAACTAAGAGT-
|
|
145
|
+
i panTro2.chrM C 0 C 0
|
|
146
|
+
s rheMac2.chr5 34436426 127 - 182086969 aaTGTTAGGTCAAGGTGTAGCCCATGAAGTGGCATGAAATGGGCTACATTTTCT---ATGTC---CAGAAAATT--T-CACAACAACCTTT--ATGAAAT---CTAAGA--GCTCAAGGAGGATTTAGCAGTAAACCAAGAGC-
|
|
147
|
+
i rheMac2.chr5 C 0 C 0
|
|
148
|
+
s bosTau2.chrM 1099 128 + 16338 AACGTTAGGTCAAGGTGTAACCTATGAAATGGGAAGAAATGGGCTACATTCTCT---ACACC---AAGAGAATCAAG-CACGAAAGTTATT--ATGAAA----CCAATA--ACCAAAGGAGGATTTAGCAGTAAACTAAGAAT-
|
|
149
|
+
i bosTau2.chrM C 0 C 0
|
|
150
|
+
s canFam2.chrM 741 125 + 16727 AAAGTTAGGTCAAGGTGTAACTTATGAGGTGGGAAGAAATGGGCTACATTTTCT---AC-CC---AAGAACATT--T-CACGAATGTTTTT--ATGAAA----TTAAAA--ACTGAAGGAGGATTTAGTAGTAAATTAAGAAT-
|
|
151
|
+
i canFam2.chrM C 0 C 0
|
|
152
|
+
s dasNov1.scaffold_23239 4549 126 - 16977 GACGTTAGGTCAAGGTGTAGCTTATGGGGTGGGAAGAAATGGGCTACATTTTCT---AA-TA---AAGAGCAAA----TACAAAAAACTTA--ATGAAACAATTTAAGA----CTAAGGTGGATTTAGTAGTAAGCTAAAAAT-
|
|
153
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
154
|
+
s loxAfr1.scaffold_36650 3754 126 + 16266 AAAGTTAGGCCGAGGTGTCGCCTACGTGACGGTCAAAGATGGGCTACATTTTCT---AT-TA---TAGAACAGA--CAAACGGATATCACT--CTGAAA----TGGGTG--GTTGAAGGCGGATTTAGTAGTAAACTAAGAAT-
|
|
155
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
156
|
+
s echTel1.scaffold_181343 2 129 + 18297 AACGTTAGGTCAAGGTGTAACCCATGTGGTGGAACCTAATGGGCTACATTTTCTAGCAT-TA---GAAAACCTT--C-AACGAAAGTACTA--ATGAAA----TTTCAGT-ACTAAAGGAGGATTTAGTAGTAAACTGAGAAT-
|
|
157
|
+
i echTel1.scaffold_181343 n 1561 C 0
|
|
158
|
+
s monDom4.chrUn 117152173 125 + 174229318 AACGTTAGGTCAAGGTGTAGCATATGATAGGGAAAGAAATGGGCTACATTATCT---AG-CT---TAGATTACA------CGAATCACATT--ATGAAAT---CTAATGTGCCTGAAGGAGGATTTAGTAGTAAATTAAGAAT-
|
|
159
|
+
i monDom4.chrUn C 0 C 0
|
|
160
|
+
s galGal2.chrM 1989 122 + 16775 TAAGACAGGTCAAGGTATAGCCTATGGGGTGGGA-GAAATGGGCTACATTTTCT---AA-CA---TAGAACAAA------CGAAAAAGGAT--GTGAAAC---CCGCCC--TTAGAAGGAGGATTTAGCAGTAAAGTGAGATC-
|
|
161
|
+
i galGal2.chrM C 0 C 0
|
|
162
|
+
s xenTro2.scaffold_18005 1618 123 + 3405 TACGTCAGGTCAAGGTGTAGCANATGAAGTGGGAAGAAATGGGCTACATTTTCT---AA-TA--CTAGAAAAAA-----CGAAAGATCTTT--ATGAAAC---C--AGA--TCAGAAGGCGGATTTAGCAGTAAAGAGAGACA-
|
|
163
|
+
i xenTro2.scaffold_18005 C 0 N 0
|
|
164
|
+
s tetNig1.chrUn_random 103510495 123 + 171761319 AACGTCAGGTCGAGGTGTAGCGTATGGAGGGGGAAGAAATGGGCTACATTCTCT---GC-CC---AGAGAACCA------CGAATGACATA--ATGAAA----CACATG--TCTGAAGGAGGATTTAGCAGTAAGTAAAGAAAC
|
|
165
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
166
|
+
s danRer4.chrM 1695 122 + 16596 AAAGTCAGGTCGAGGTGTAGCACATGAAATGGGAAGAAATGGGCTACACTTTCT---AC-CC---CAGAATATA------CGAA-AATGTAACATGAAA----CA-ATA--CTTGAAGGAGGATTTAGCAGTAAA-AGAGAAGC
|
|
167
|
+
i danRer4.chrM C 0 C 0
|
|
168
|
+
|
|
169
|
+
a score=2286094.000000
|
|
170
|
+
s mm8.chrM 866 631 + 16299 AGA------GAGCTTAATTGAATTGAGCAATGAAGTACGCACACACCGCCCGTCACCCTCCT--CAAAT----------TA-AATTAAACTTAACA-TA---AT-TAATTTCTAGACATCCGTTT-ATG-AGAGGAGATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAAT--A-ATCATAGTGTAGCT-TA-A-TATTAAAGCATCTGGCCTACACCCAGAAGAT---TTCATGACCAA--TGAACACTCTGA-AC--TAATC-----CTAGCCCTA--G-CCC-TA---------CACAAATAT--AA---------TTA-TACT--ATTAT------------ATAAATCAAAACATT-TATCC--TA-----CTAAAAGTATTGGAGAAAGAA-----AT-----TCGTACATCTAGGAGCTATAGAA----CTAGTACCGCAAGGGAAA-GATGAAA-G--ACTAATTAA------------AAGTAAGAACAAG-CAAAGATTAAACCTTGTACCTTTTGCATAATGAACTAACTAG-AAAACTTCTAACTAAAAGAATTACAGCTAGAAACCCCGAAA-CCAAACGAGCTACCTAAAAACAATTT-----T--AT---GAATCAACTCGTCTATGTGGCAAAATAGTGAGAAGATTTTTAGGTAGAGGTGAAAAGCCTAACGAGCTTGGTGATAGCTGGTTACCCA-AAAA-ATGAATTTAAGTTCAATTTTAAA------C-------TTGCTA------------------AAAA------AA-CAA
|
|
171
|
+
s oryCun1.scaffold_140182 976 628 + 20791 AGA------GTGCTTAATTGAACAAGGCCATGAAGCACGCACACACCGCCCGTCACCCTCCT--CAAGT-------------GACAAATATTTACT-TATACCT-AATTACATAAATAGACAAGC-ATA-AGAGGAGATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGACA--C-TTCAGAGCGTAGCT-TA-A--CTTAAAGCACTTGGCTTACACCCAAGAGAT---TTCAT--TTAC--TGACCACTCTGA-GC--CAACA-----CTAGCCCTA--T-GA---A----------ACTAACACTGAA---------CCA-GAGTA-ATTAG------------CTAAACTAAACCATT-CACCC--CAT---ATTAAAAGTATAGGAGATAGAA-----AT-----TTA--TATCCAGGCGCTATAGAG----AAAGTACCGTAAGGGAAA-GATGAAA-G--ATTAGTTAA------------TAGCACAAAAAAG-CAGAGATTACTTCTCTTACCTTTTGCATAATGAATTAGCTAG-AAAATCCTTAGCAAAAAGAATTTTAGTTAAGAACCCCGAAA-CCAGACGAGCTATTTATGAGCAGTTG-----A--AA---GAACGAACCCGTCCATGTGGCAAAATGGTGGGAAGACTTGTAAATAGAGGTGAAAAGCCAACCGAGCCTGGTGATAGCTGGTTGTCCA-GAAT-A-GAATTTTAGTTCAACTTTAAA------T-------TTTCCT------------------AAAG------GA-CAT
|
|
172
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
173
|
+
s rn4.chrM 866 628 + 16300 AGA------GAGCTTAATTGAATAGAGCAATGAAGTACGCACACACCGCCCGTCACCCTCCT--CAAAT----------TA-GATTGACATTCACA-TATACAT-AATTTCACTAACA--AATTT-ATG-AGAGGAGATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAAT--A-ATCACAGTGTAGCT-TA-A-TCACAAAGCATCTGGCCTACACCCAGAAGAA---TTCATAAAAAA--TGAACACTTTGA-AC--TAACC-----CTAGCCCTA--C-AAC-CA----------ACCAACAT--AA---------CTA-AACC--CCCAC------------ATAAACTAAAACATT-TAACT--CA-------AAAAGTATTGGAGAAAGAA-----AT-----TTACTTACC-AAGAGCTATAGAG----AAAGTACCGCAAGGGAAATGATGAAA-G--ACTAATTTA------------AAGTAAAAACAAGACAAAGATTAAACCT-GTACCTTTTGCATAATGAATTAACTAG-AAAATCCTTAACAAAAAGAATTTAAGCTAAGAACCCCGAAA-CCAAACGAGCTACCTAAAAACAATTT-----C--AT---GAATCAACCCGTCTATGTAGCAAAATAGTGGGAAGATTTTTAGGTAGAGGTGAAAAGCCTATCGAGCTTGGTGATAGCTGGTTGCCCA-AAAA-A-GAATTTCAGTTCAAACTTTAA------G-------CTTCCA------------------TCAG------AA-CAA
|
|
174
|
+
i rn4.chrM C 0 C 0
|
|
175
|
+
s hg18.chrM 1445 625 + 16571 AGA------GTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCT--CAAGTA---------TA-CTTCAAAGGACATT-TA---AC-TAAAACCCCTACG--CATTT-ATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGACG--A-ACCAGAGTGTAGCT-TA-A--CACAAAGCACCCAACTTACACTTAGGAGAT---TTCAACTTAAC-TTGACCGCTCTGA-GC--TAAAC-----CTAGCCCCA--A-ACC-CA----------CTCCACCT--TA---------CTA-CCAG--ACAAC------------CTTAGCCAAACCATT-TACCC--AA------ATAAAGTATAGGCGATAGAA-----AT-----TGA--AACC-TGGCGCAATAGAT----ATAGTACCGCAAGGGAAA-GATGAAA-A--ATTATAACC------------AAGCATAATATAG-CAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAG-AAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAA-CCAGACGAGCTACCTAAGAACAGCTA-----A--AA---GAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCA-AGAT-A-GAATCTTAGTTCAACTTTAAA------T-------TTGCCC------------------ACAG------AA-CCC
|
|
176
|
+
i hg18.chrM C 0 I 2
|
|
177
|
+
s panTro2.chrM 861 626 + 16554 AGA------GTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCT--CAAGTA---------TA-CTTCAAAGGATACT-TA---ACTTAAACCCCCTACG--TATTT-ATATAGAGGAGATAAGTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGACG--A-ACCAGAGTGTAGCT-TA-A--CATAAAGCACCCAACTTACACTTAGGAGAT---TTCAACTCAAC-TTGACCACTCTGA-GC--CAAAC-----CTAGCCCCA--A-ACC-CC----------CTCCACCC--TA---------CTA-CCAA--ACAAC------------CTTAACCAAACCATT-TACCC--AA------ATAAAGTATAGGCGATAGAA-----AT-----TGT--AAAC-CGGCGCAATAGAC----ATAGTACCGCAAGGGAAA-GATGAAA-A--ATTATACCC------------AAGCATAATACAG-CAAGGACTAACCCCTGTACCTTTTGCATAATGAATTAACTAG-AAATAACTTTGCAAAGAGAACCAAAGCTAAGACCCCCGAAA-CCAGACGAGCTACCTAAGAACAGCTA-----A--AA---GAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCA-AGAT-A-GAATCTTAGTTCAACTTTAAA------T-------TTACCT------------------ACAG------AA-CCC
|
|
178
|
+
i panTro2.chrM C 0 I 2
|
|
179
|
+
s rheMac2.chr5 34436553 630 - 182086969 AGA------GTGCTTGGTTGAATAAGACCATGAAGCATGCACACACCACCCGTCACCCTCCT--CAAATA--------TTA-CTGTAGAAATCACTATT---AC-TAATAGTTTTATA--TGCAC-ATATAGAAGAGATAAGTTGTAACATGTTAGGCATACTGGCAAGTGTGCTTGGACA--A-ACCAAAGTGTAGCT-TA-A--ACCAAAGCATCTGGCTTACACCTGGAAAAT---TTCACTGTGAA-CTGATCACTTTGA-GC--TAACT-----CTAGTACCA--A-ACCTCG----------CTAAAAAA--TA---------TTA-TTAA--ACTAT------------CTTAATCAGGTGATT-TACTTTAGA------AAAAAGTATAGGTGATAGAA-----AT-----TTT--TACCATGGCGCAATAGAC----ATAGTACCATAAGGGAAA-GATGAAAGA--ACTATA-TC------------AAGCACTAAAAAG-CAAAGACAAGCCCTCATACTTTCTGCATAATGTATTAACTAG-AAAT-ACTTTACACAGAGAACTATAGCCAAGTCCCCCAAAA-ACAGACGAGCTACCCAAGAATAACTG-----A--AA---GAGCACACTCATCTATGTGGCAAAGTAGTGGGAAGATTCAGCAGCAGCGGTGACAAGCCTACCAAGCCTGGTGATAGCTGGTTATCCA-AGAT-A-GAATCTTAATTCAACTTTAAA------C-------TTAGCC------------------ACAG------AA-TTA
|
|
180
|
+
i rheMac2.chr5 C 0 I 1
|
|
181
|
+
s bosTau2.chrM 1227 638 + 16338 AGA------GTGCTTAGTTGAATTAGGCCATGAAGCACGCACACACCGCCCGTCACCCTCCT--CAAATAG--ATTCAGTG-CATCTAACCCTATT-TA---AA-CGCACTAGCTACA--TG--------AGAGGAGACAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGATA--A-ATCAAGATATAGCT-TA-A---ACAAAGCATCCAGTTTACACCTAGAAGAC---TTCATTCATTA--TGAATATCTTGA-AC--TAGAC-----CTAGCCCAAAGA-TAC-CC----------TCTCGACT--AA---------ACA-ACCAAGATAGA------------ATAAAACAAAACATT-TAATC--CCA---ATTTAAAGTATAGGAGATAGAA-----AT-----CTA--AGTA-CGGCGCTATAGAG----AAAGTACCGCAAGGGAAC-GATGAAA-GAAAAAAACTAA------------AAGTATAAAAAAG-CAAAGATTACCCCTTGTACCTTTTGCATAATGAATTAACTAGTATAAGACTTAACAAAATGAATTTTAGCTAAGCAGCCCGAAA-CCAGACGAGCTACTCACAAACAGTTT-----ACCAA---GAACTAACTCATCTATGTGGCAAAATAGTGAGAAGATTTGTAAGTAGAGGTGACATGCCTAACGAGCCTGGTGATAGCTGGTTGTCCAGAAAA-T-GAATCTAAGTTCAGCTTTAAA------G-------ATACCA------------------AAAAT----TCA-AAT
|
|
182
|
+
i bosTau2.chrM C 0 C 0
|
|
183
|
+
s canFam2.chrM 866 628 + 16727 AGA------GAGCTTAATTGAATAGGGCCATGAAGCACGCACACACCGCCCGTCACCCTCCT--CAAGTA---ATAAGACA-CAACCATAACCATA-TT---AA-CTTAACTAAAACA--CA--------AGAGGAGACAAGTCGTAACAAGGTAAGCATACCGGAAGGTGTGCTTGGATT--A-ATCAAAGTGTAGCT-TA-A---CTAAAGCGTCTGGCCTACACCCAGAAGAT---TTCATTACTTA--TGGCCACTTTGA-AC--AAAAG-----CTAGCCCAA--C-TAA-CC----------CCAAACTT--AA---------GTA-TTACAGACA-C------------ATAAAATAAAACATT-TAGTT--AAA--CAATAAAAGTATAGGAGATAGAA-----AT-----TTT--AAT--TGGAGCGATAGAG----ATAGTACCGTAAGGGAAT-GATGAAA-G--ACATCTTAA------------CAGTATTAAACAG-CAAAGATTACCCCTTCTACCTTTTGCATAATGAACTAGCCAG-AAACAACTTAACAAAGAGAACTTAAGCTAAGCTCCCCGAAA-CCAGACGAGCTACCCATAAACAATCT-----A-AAA---GGATCAACTCATCTATGTAGCAAAATAGTGAGAAGATTTGTGGGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTACCCACAGAC-A-GAATTTTAGTTCAACTTTAAA------T-------TTACCt------------------aaaa------aa-aat
|
|
184
|
+
i canFam2.chrM C 0 C 0
|
|
185
|
+
s dasNov1.scaffold_23239 4675 637 - 16977 AGA------GAGTTTAGCTGAACCAGGCCATAAAGCACGCACACACCGCCCGTCACCCTCTT--CAATTAT--AAGCGCCA-CATAAACTAAAACA-C----AT-TAATTCAGTAGCA--ACTAT-ATA-AGAAGAGACAAGTCGTAACAAGGTAAACATACTGGAAAGTGTGTTTGGAT---A-ACCAAAGTGTAGCT-TA-C-AACCAAAGCATCCGGCTTACACCCAGAAGAC---TTCAGATAGAC--TGACCACTTTGA-AC--TAGAC-----CTAGCCCTA--A-ACC-CA---------CAACAACAA--TA---------CTA-TCAC--ACAGC-----------AATAAATCAAAACATT-TACCA--AATACTAACTAAAGTATAGGAGATAGAA-----AT-----TTT--ACTA-AGGCGCTATAGAA----ATAGTACCGCAAGGGAAA-GATGAAA-G--ACCCCCTGA------------TAGTAAGAAACAG-CAAAGACTAATACTTTTACCTTTTGCATAATGAATTAACTAG-ACTAATTTTGGCAAAGAGAACTTTAGTCAAATATCCCGAAA-CCAGACGAGCTACTTATGGACAGTAA-----T--TA---GTACTAACTCATCTATGTCGCAAAATAGTGAGAAGATCTGTAAGTAGAGGTGAAAGACCAACCGAGCCTGGTGATAGCTGGTTGCCCA-GAAC-A-GAATTTTAGTTCAACTTAAAA------C-------TTATCT------------------CAAG------AA-CCA
|
|
186
|
+
i dasNov1.scaffold_23239 C 0 I 4
|
|
187
|
+
s loxAfr1.scaffold_36650 3880 627 + 16266 AGA------GAGCTTAATTGAACAAGGCTATGAAGCGCGTACACACCGCCCGTCACTCTCCT--CAAGTATCCCCACATCA-----AACAATCATA-TT---AC-AG--ATTTAAACA--AATAC-A---AGAGGAGACAAGTCGTAACAAGGTAAGCGTACTGGAAAGTGCGCTTGGATA--A-CTCAAAGTGTAGCT-TA-A--CAAAAAGCATCTGGCTTACACCTAGAAGAC---CTCATTTACAA--TGATCACTTTGA-AC--TAAAT-----CTAGCCCTA--C-CAA-CC----------CTACACTC--AA---------TTC-TCAT--ATTAT-----------ATTAAATCAAAACATT-CACTT--AC-----CAAAAAGTATAGGAGATAGAA-----AT-----TTC--ACTA-AGGCGCAATAGAG----ATAGTACCGCAAGGGAAT-GATGAAA-G--ATAGTTTAA------------TAGTAAAAAATAG-CAAGGATTAACCCCTTTACCTTTTGCATAATGAATTAACTAG-AAAA-ATCTGACAAAGAGAACTATAGCCAGAAACCCCGAAA-TCAGACGAGCTATCTGATAGTAATCC-----C--CA---GGATCAATTCATCTATGTGGCAAAATAGTGAAGAAACTTACAGATAGAGGTGAAATACCAATCGAGCCTGATGATAGCTGGTTGTCCA-GAAATA-GAATTTTAGTTCTACCTAAAA------C-------TTACCA------------------CAAA------AACAAA
|
|
188
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
189
|
+
s echTel1.scaffold_181343 131 630 + 18297 AGA------GTGCTCAGTTGAAACTGGCCATGAAGCGCGCACACACCGCCCGTCACCCTCCT--TA---ATTTATATATTATAAGTAACCTCCATA--A---AC-AGCTACTTATACA--CCCCA-T---AAAGGAGACAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAAA--ACCTCAAAACGTAGCT-TA-A--T-AAAAGCATCTGGCCTACACCCAGAAGAT---TTCA-TGACAC--TGACCGTTTTGA-AC--TAAAT-----CTAGCCCAA--CTCAA-AT----------AGAAACTT--AA----------CC-AAAT--AAAAC-----------TTTAATATAAAACATT-TG-TA--GA-----CATAAAGTATAGGAGATAGAA---ATAT-----TCC--ATAG-ATGCGCTATAGAG----ATAGTACCGTAAGGGAAA-AATGAAA-G--ATAACTTAA------------TAGTACCAAAAAG-CAAAGCTTAAACCTTATACCTTTTGCATAATGAGTAAACTAG-AAAATTTTTGACAAAGGGAACTTTAGCCAAAAACCCCGAAA-CCAGACGAGCTACCCTAGAGCAATCT-----T-GTT---GGATCAACTCATCTATGTGGCAAAATAGTGAGAAGACTTTAAGGTAGAGGTGAAAAGCCAACCGAGCCTGGTGATAGCTGGTTGCCCA-AGAA-A-GAATTTAAGTTCGACCTAAAA------A-------TTACTA------------------CCAA------TA-ACt
|
|
190
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
191
|
+
s monDom4.chrUn 117152298 631 + 174229318 AGA------GTGCTTAATTGAATTAGGCAATAGGGCGCGCACACACCGCCCGTCACCCTCCT--CAACTC---------AA-CCTACAAAAATACT-TA---AT-AA-------TATA--TCTAA-GTAAAGAGGAGAAAAGTCGTAACACGGTAAGTGTACTGGAAAGTGCACTTGGAAT--A--TCAAAATGTAGCT-TA-ACTACTAAAGCATTTAGCTTACACCTAAAAGAT---TTCAGTTAATT-CTGACCATTTTGA-GC--CAATT-----ATAGCTCTA--A-CAA-TC----------TTCAAATA--AA---------CTATTTAT--ACACT------------TATATTTAAAACATT-TTAAT--TC------CCCTAGTATAGGAGATAGAACAGAAAC-----ATA--A----TGAAGCAATAACA----ATAGTACCGTAAGGGAAAAAATGAAA-G--ATAGATTGA------------TAGCATAAAAAAG-CAAAGATTAAACCTTGTACCTTTTGCATAATGATTTAGCCAG-TCAA-CATAGGCAAAAAGAATTTAAGCCTAGAACCCCGAAA-TTAAGTGAGCTACTATAGAACAGTTA-----TTTAT---GAACTTACTCCTCTATGTGGCAAAATAGTGAGAAGATTTTATAGTAGAAGTGAAAAACCTATCGAACTTAATGATAGCTGGTTATCCA-AAAT-ACGAATTTTAGTTCAACCTTAAG------T-------TTAACA------------------CAAAGCATACGA-TAT
|
|
192
|
+
i monDom4.chrUn C 0 C 0
|
|
193
|
+
s galGal2.chrM 2111 664 + 16775 ATACCCCCTAAGCTCACTTTAAGACGGCTCTGAGGCACGTACATACCGCCCGTCACCCTCTT--CACAAGCCATC----AA-CATCAATAAATATA-TA---CT-TCCCCTCCCGGCT--AA--------AGACGAGGCAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGCACTTAGACT--A--CCAAGGCGTAGCTATA-A-CTTCAAAGCATTCAGCTTACACCTGAAAGATACCCTCAACAGACA--AGGTCGCCTTGA-CT--TGCCCCCCCTCTAGCCCGA--C-AAA-CT----------CGTACCCT--TA---------ACA-TAAA--AAACT-TACCTCCCCCTCTTAACCAAAACATTATAAAT--TG------TCCCAGTATAGGCGATAGAA-----AA-----GAC--TACCCCGGCGCAATAGAGGCTAACTGTACCGCAAGGGAAA-GATGAAA-T--AGCAATGAAAACCAT------AAGCAAAAAACAG-CAAAGACCAACCCTTGTACCTTTTGCATCATGATTTAGCAAG-AACA-ACCAAGCAAAGTGAGCTAAAGTTTGCCTTCCCGAAACCCAAGCGAGCTACTTGCGAGCAGCTA-----A--AATTTGAGCGAACCCGTCTCTGTTGCAAAAGAGCGGGATGACTTGCCAGTAGAGGTGAAAAGCCTACCGAGCTGGGTGATAGCTGGTTACCTG-TCAA-ACGAATCTAAGTTCCCCCTTAAC------C-------CACCCC------------------CTAA------AG-ACA
|
|
194
|
+
i galGal2.chrM C 0 I 23
|
|
195
|
+
s xenTro2.scaffold_18215 7 644 + 3330 AGA------GAGCTCTCTTTAA-ATGGCCCTGGGGCGCGCACACACCGCCCGTCACCCTTCTTCCAAAAACCACC----TA-CCTTAAATAAAACA-TT---AC-AA------AAACA--A---------AGAAGAGGCAAGTCGTAACATGGTAAGCGCACCGGAAGGTGCGCTTGGA------ATCAAAGTATAGCT-TA-A--CCTAAAGCCCCTCGCTTACACCGAGACGAT---ATCCGTTAAACCCAGATTACTTTGA-GCCATAAAC-----CTAGCCTTA--T-TAT-TT----------ACCAACAA--AAGATTACCCCCTA-CACCA-ACCCC------------ACCAACTAAACCATT-T---T--AA----ACTTTTAGTATAGGCGATAGAA-----AC-----AAG--TCT--AAGAGCTACATAT----CCAGTACCGCAAGGGAAA-GGTGAAA-T--AGAAATGAAACAAAT--AATAAAGCAACAAACAG-CAGAGAAAAACCCTCGTACCTTTTGCATAATGGTCTAGCAAG-TCCTAGTCAAGCAAAAAGAATTTAAGTTTGACCCCCCGAAA-CTAAGCGAGCTACTCCGAGACAGCTT-----T-TTA---GAGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGATCTCCGAGTAGGGGTGACAGACCAAACGAGCTTAGTGATAGCTGGTTGCTCA-GGAA-ACGAATATAAGATCAACTCTAAG------TCCCGTTATTAGCA------------------AACA------AA-GCA
|
|
196
|
+
i xenTro2.scaffold_18215 N 0 C 0
|
|
197
|
+
s tetNig1.chrUn_random 103510618 674 + 171761319 AGA------GTGTCTTACTGAAACCGGCCATGAAGCGCGCACACACCGCCCGTCACTCTCCC--CAAAT----------CA-AACCCAC----CAA-TA---AT-TAATACACTATCA--CACACAA---AGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAAA--A-ATCAGAATATAGCT-TAGA-TAGAAAAGCACCTCCCTTACACCGAGGAGCC---ACCCGTGCAAATCGGATTATTCTGACAC--CTAAT---AGCTAGCCCCT--C-CCC-CAAAAACAAAAAATAACTAT--TA---------ATA-CCCC--CTAATACACTTAATTAACCAAAACAAACCATT-TTTCC--CC-------CTAAGTATGGGCGACAGAA-----AAGGACCTAA---------GAGCTACAGAC----AAAGTACCGCAAGGGAAC-GCTGAAA-G--AGAAGTGAAACAACCCAGTTTAAGTACAAAAAAG-CAGAGATTAAACCTCGTACCTTTTGCATCATGATTTAGCCAG-CAAACCTTAGGCAAAGAGCACTTTAGTCTAATTCCCCGAAA-CTGGACGAGCTACTCCAAGACAGCCT-----TCATA---GGGCACATCCGTCTCTGTGGCAAAAGAGTGGAAAGAGCTTTGAGTAGAGGTGACAAACCTACCGAGCCCAGTAATAGCTGGTTGCCCG-AAAA-TTGAGTTTAAGCTCAGCTTTTTAGCTTCTT-------GCCTCACCAACAGTAAAAACACAA----------------
|
|
198
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
199
|
+
s danRer4.chrM 1817 657 + 16596 AGA------GTGTCTCTTTGAACCCGGCTCTAAGGCGCGTACACACCGCCCGTCACTCCCTC--C-GGT----------CA-ATTGCACAAG-AAA-TA---AT-TAATACAGAAGCA--CAGAC-A---AGGGGGGAAAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGCACTTGGACATTA-TCCAAGACGTGGCT-GA-A-CAGTTAAGCATCTCACTTACACCGAGAAAAC---ATCCGTGCAAATCGGATCGTCCTGA-GC--TAAAT---AGCTAGCTTAA--C-CAT-CAAGATCAACTTAAAAACAT--CA---------ATA-ACCT--ATAATCAACCTAAAACCACAAACTAAACCATT-ATATT--AT-------CCTAGTATGGGAGACAGAA-----AAGA---TAA--AATA-CTAAGCAATAGAG----AAAGTACCGCAAGGGAAC-GCTGAAA-G--AGAAATGAAATAACCC-GTAAAAGCAATAAAAAG-CAAAGATTAAACCTTGTACCTTTTGCATCATGATTTAGCCAA-C-ACCACTAGGCAAAGAGACCTTTAGTTTAAAGCCCCGAAT-CCAGGTGAGCTACCCCGAGACAGCCTATTTAACTTA---GGGCCAACCCGTCTCTGTGGCAATAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTATCGAACCCGGCAATAGCTGGTTGTCTG-GGAG-ATGAATAAAAGTTCAGCTTCGTA------C-------ACCCCa----------------------------------
|
|
200
|
+
i danRer4.chrM C 0 I 27
|
|
201
|
+
|
|
202
|
+
a score=160222.000000
|
|
203
|
+
s mm8.chrM 1497 81 + 16299 CAAAATCAAA------AAGTAAG----TTTAGATTATAGCCAAAAGAGGGACAGCTCTTCTGGAA--CGGAAAAAACCTT-TAATAGTGAATAA---------
|
|
204
|
+
s oryCun1.scaffold_140182 1604 81 + 20791 AAAA-CCCTA------ATGAAAA----TTTAAATGTTACTCTAAAGAGGGACAGCTCTTTAGATA-TAGGACACAGCCTT-TTATAAAGAGTAA---------
|
|
205
|
+
i oryCun1.scaffold_140182 C 0 M 1789
|
|
206
|
+
s rn4.chrM 1494 81 + 16300 CAAA-TCAAA------ATGTAAA----CTTAAAATATAGCCAAAAGAGGGACAGCTCTTTAGGAA-ACGGAAAAAACCTT-AAATAGTGAATAA---------
|
|
207
|
+
i rn4.chrM C 0 C 0
|
|
208
|
+
s hg18.chrM 2072 82 + 16571 TAAA-TCCCC------TTGTAAA----TTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGAAAAAACCTT-GTAGAGAGAGTAA---------
|
|
209
|
+
i hg18.chrM I 2 C 0
|
|
210
|
+
s panTro2.chrM 1489 82 + 16554 TAAA-TCCCC------TTGTAAA----CTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTAGACACTAGGAAAAAACCTT-GTAAAGAGAGTAA---------
|
|
211
|
+
i panTro2.chrM I 2 C 0
|
|
212
|
+
s rheMac2.chr5 34437184 76 - 182086969 TTAA-TTTCC------CAGTAAG----TGTAACTA-------ACTAAGGGACAGCTCTTTAGACCCTAGGAAACAACCTTCCTACAGAGAGTAA---------
|
|
213
|
+
i rheMac2.chr5 I 1 C 0
|
|
214
|
+
s bosTau2.chrM 1865 79 + 16338 -AAA-CCCCA------CTGTAGC----TTTAAAAGTTAGTCTAAAAAGGTACAGCCTTTTAGAAA-C-GGATACAACCTT-GACTAGAGAGTAA---------
|
|
215
|
+
i bosTau2.chrM C 0 C 0
|
|
216
|
+
s canFam2.chrM 1494 81 + 16727 aaaa-tttta------atgtaaa----tttaaaatataGTCTAAGAAGGTACAGCTTCTTAGAAT-CAGGATACAACCTT-TATTAGAGAGTAT---------
|
|
217
|
+
i canFam2.chrM C 0 C 0
|
|
218
|
+
s dasNov1.scaffold_23239 5316 82 - 16977 TTAA-TCTTA------ATATAAG----TTTTAAATATACTCAATAGAGGTACAGCTCCATTGAAACAGGTATTAAACCTG-CACAGGAGAGTAA---------
|
|
219
|
+
i dasNov1.scaffold_23239 I 4 C 0
|
|
220
|
+
s loxAfr1.scaffold_36650 4507 81 + 16266 ATAA-TTCCA------ATGTAAG----TTTTAGAGATATTCAAAAGGGGTACAGCTCTTTTGACC-AAGGATACAACCTT-GATTAGCGAGTAA---------
|
|
221
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
222
|
+
s echTel1.scaffold_181343 761 81 + 18297 ataa-attta------atgtaat----ttttagttataattaaaaGAGGTACAGCTCTTTTAATT-GAGGAAACAACCTT-ATTTAGAGAGTAA---------
|
|
223
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
224
|
+
s monDom4.chrUn 117152929 81 + 174229318 CAAA-GCATA------TCTTAGA----CTTAATAGTTAATCAAATGAGGGACATCTCATTTGATA-AAGTGGACAAACTT-CATAAGAGGGTAA---------
|
|
225
|
+
i monDom4.chrUn C 0 C 0
|
|
226
|
+
s xenTro2.scaffold_18215 651 75 + 3330 AAA-----------------AACACTTCTTAGAATTTATTCAACCAGGGTACAGCCTGGTTGAAA-CAGGATACAACCTA-CAACTATGGGTAA---------
|
|
227
|
+
i xenTro2.scaffold_18215 C 0 I 10
|
|
228
|
+
s tetNig1.chrUn_random 103511292 89 + 171761319 ------CCGATTTA--AAGAAAC----TAAAAAAGTTAGTCAAAGGGGGTACAGCCCCTCTGACC-CAAGAAACAACTTT-CCCAGGAGAATAAGGATCCTAA
|
|
229
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
230
|
+
s danRer4.chrM 2501 91 + 16596 ------CAAAATTAAGAGAAAAA----TACGAAAGTTAGTTAAAGAGGGTACAGCCCCTTTAACA-AAGGATACAACCTT-TTCAGGAGAATAAAGATCATAA
|
|
231
|
+
i danRer4.chrM I 27 C 0
|
|
232
|
+
s galGal2.chrM 2798 72 + 16775 ----------------CGTTGGG----GTTAAGAGCAATTCGATGGGGGTACAGCTCCATCGAAA-AAGAACACAACCTC-CTCCAGCGGATAA---------
|
|
233
|
+
i galGal2.chrM I 23 C 0
|
|
234
|
+
|
|
235
|
+
a score=164919.000000
|
|
236
|
+
s mm8.chrM 1578 166 + 16299 TTAACAAAAC---------AGCTTTT--------------AACCAT-------TGTAGGCCTAAAAGCA-GCCACCAAT-AAAGAAAGCGTTCAAGCTCAACATAAAATTTCA-----ATTAATTCCA--TAA-------TTTACACCAA----------CT-TCCTAA-----ACT-TA-AAATTGGGTTAA-TCTATAACTTTATAGATGCAACACTGTTAGTATGAGT
|
|
237
|
+
s rn4.chrM 1575 163 + 16300 ACAACTACA----------ATCACTT--------------AACCAT-------TGTAGGCTTAAAAGCAAGCCATCAAT-AAAGAAAGCGT-CAAGCC--ACATCATCTTACACACACACTAATTCCA--CAA-------ACCTCAAAAA-----------T-TCCAAA-----ATT-AC-AAATTGGGCTAAATCTATGATCCTAGTGA----ATACTGTTAATATGTG-
|
|
238
|
+
i rn4.chrM C 0 C 0
|
|
239
|
+
s oryCun1.scaffold_116167 3974 163 + 15695 -------------------GTTATTTTC-----------AATCCAT-------AGTTGGCTTAAAAGCA-GCCATCAAT-TAAGAAAGCGTTAAAGCT---CAACAACTAAAA-----ACCAACTTAA--TAAGAATATTTTAAAACGAA----------CT-CTTATA-----AAC-CC-TAACTGGACTAA-TCTATAAATCTATAGAAGAAATAATGCTAATATAAGT
|
|
240
|
+
i oryCun1.scaffold_116167 n 0 C 0
|
|
241
|
+
s hg18.chrM 2154 159 + 16571 ------AAA----------ATTTAAC--------------ACCCAT-------AGTAGGCCTAAAAGCA-GCCACCAAT-TAAGAAAGCGTTCAAGCT---CAACACCC---------ACTACCTAAA--AAA-------TCCCAAACATATAAC---TGAA-CTCCTC-----ACA-CC-CAATTGGACCAA-TCTATCACCCTATAGAAGAACTAATGTTAGTATAAGT
|
|
242
|
+
i hg18.chrM C 0 C 0
|
|
243
|
+
s panTro2.chrM 1571 159 + 16554 ------AAA----------ATTTAAC--------------ACCCAT-------AGTAGGCCTAAAAGCA-GCCACCAAT-TAAGAAAGCGTTCAAGCT---CAACACCC---------ACAACCTTAA--AGA-------TCCCAAACATACAAC---CGAA-CTCCTT-----ACA-CC-CAATTGGACCAA-TCTATTACCCCATAGAAGAACTAATGTTAGTATAAGT
|
|
244
|
+
i panTro2.chrM C 0 C 0
|
|
245
|
+
s rheMac2.chr5 34437260 158 - 182086969 ------AAA----------ATATTAC--------------CACCAT-------AGATGGCCCAAAAGCA-ACCACCAGT-TAAGAAAGCATTTAAATT---CAACTTCT---A-----ACTATCTTCA----A-------TTCTAATCACTCTAC---TGTT-CTCCTA-----ACA-CC-ACATTGGACTAA-TCTATTATGTAATAGAAGCAATAATGTTAATATAAGT
|
|
246
|
+
i rheMac2.chr5 C 0 C 0
|
|
247
|
+
s bosTau2.chrM 1944 161 + 16338 ------AAT----------TTAACAC--------------TACCAT-------AGTAGGCCTAAAAGCA-GCCATCAAT-TAAGAAAGCGTTAAAGCT---CAACAACA---------AAAATTAAAT--AGA-------TTCCAACAACAAATG--ATTAA-CTCCTA-----GCC-CCAATACTGGACTAA-TCTATTATAGAATAGAAGCAATAATGTTAATATGAGT
|
|
248
|
+
i bosTau2.chrM C 0 C 0
|
|
249
|
+
s canFam2.chrM 1575 161 + 16727 ------ATA----------CTAATAT--------------CACCAT-------AGTTGGCTTAAAAGCA-GCCACCAAT-TGAGAAAGCGTTCCAGCT---CAACAAAC---------AATA-TAACT--TAA-------TCCCAACCATACTAC--ATCAA-CTCCTAATTATACC-CC----CTGGGTCAT-TCTATTTAAGTATAGAAGCAATAATGCTAGTATGAGT
|
|
250
|
+
i canFam2.chrM C 0 C 0
|
|
251
|
+
s dasNov1.scaffold_23239 5398 161 - 16977 --GCCGTAT----------AAAACAC--------------TTACAT-------AGTTGGCCTAAAAGCA-GCCATCAAT-AAAGAAAGCGTTAAAGCT---CAACAACA---------AAACAATGAC--AGA-------TACCAAAAAC-CACT--GCCAC-CTCCCA-----ACC-TA-ATACTGGGCCAA-TCTATA--TAAATAGAAGAGATAATGTTAGTATAAGT
|
|
252
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
253
|
+
s loxAfr1.scaffold_36650 4588 164 + 16266 ---------ATTCA-----CCATTAA--------------TTTCAT-------AGTTGGCTTAGAAGCA-GCCATCAAT-TAAGAAAGCGTTAAAGCT---CAACAACC---A-----ACCAAACTAAAAAGA-------TTCCAAA-ATTAATT-AATGAT-CTCCTA-----AACATA-ATACTGGACTAA-TCTAT--ATAAATAGAAGAAATAATGTTAGTATAAGT
|
|
254
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
255
|
+
s echTel1.scaffold_181343 842 159 + 18297 ---------ACAC------CAAATAA--------------TTTCAT-------AGTTGGCCTAAAAGCA-GCCACCAAT-TAAGACAGCGTTAAAGCT---CAACAATT---T-----ATTTCTCT----AGA-------TTCC----ATTAATTCAATTCTACTCCTA-----AAT-TT-ATATTGGGCAAA-TCTATTCTTATATAGAAGCTAATCTGTTAACATAAGT
|
|
256
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
257
|
+
s monDom4.chrUn 117153010 162 + 174229318 -------------TGACTTATTTTAA--------------CCCCAT-------CGTAGGCCTAAGAGCA-GCCACCAAT-TAAGAAAGCGTTAAAGCT---CAAACATA--GA-----ATTTTATTCA--ATA-------CCCTAAAACTATCAA-----AA-CCCCTA-----TAA-CA-ATATTGGATGAT-TCTATTAAACTATAGAAGACATAATGCTAAAATCAGT
|
|
258
|
+
i monDom4.chrUn C 0 C 0
|
|
259
|
+
s galGal2.chrM 2870 152 + 16775 -------------TAATCACCCCTCC--------------CCGCAC-------TGTGGGCCTTCAAGCA-GCCACCAACAAAAGAGTGCGTCAAAGCT---C----------------CCTCATTAAA--AAA-------TCTAAAACCCTATTT-----GA-CTCCCT-----CAA-CC-AAAGCAGGTTAA-CCTATGA--CAATAGAAGAATCAATGCTAAAATGAGT
|
|
260
|
+
i galGal2.chrM C 0 C 0
|
|
261
|
+
s xenTro2.scaffold_18215 736 160 + 3330 --------------------------TCGACAGGAAAATGAACCA---------GTGGGCCTAAAAGCA-GCCACCTGT-TAAGAAAGCGTCAAAGCT---CCCTCATA---------TACCTTCCGC--CAA-------TACCGACATCTCCTC----CGA-ACCCTT-----TTT-CC-GTACTGAGCTGT-TCAATTCTAATATTGAAGCACCTATGCTAGAACTAGT
|
|
262
|
+
i xenTro2.scaffold_18215 I 10 M 106
|
|
263
|
+
s tetNig1.chrUn_random 103511381 162 + 171761319 -------------------TAACAAA--------------GGCCATGTGTTTAGGTGGGCCTAAAAGCA-GCCACCC-T-ATTGAAAGCGTTAAAGCT---CAAACACA---------CCCCCGCCAC--TAA-------TACCGATAAATACAT---CCTA-ACCCCT-----GAC-CC-TTATCGGGCCTT-TCTATGCATACATAGAAGAGACTATGCTAATATGAGT
|
|
264
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
265
|
+
s danRer4.chrM 2592 163 + 16596 ------------------TTTACAAA--------------ACACGT-TGTCGTAGTGGGCCTGGAAGCA-GCCACCTAA-AAAGAAAGCGTTAAAGCT---CAGGTAAG---------AAGAAATTCA--TAA-------TTCTGACAATAATAT---CTTA-CTTCCC-----TAA-AA-ATACCAGACTAA-TCCATACAAATATGGAAGAAATTATGCTAAAATGAGT
|
|
266
|
+
i danRer4.chrM C 0 C 0
|
|
267
|
+
|
|
268
|
+
a score=-81423.000000
|
|
269
|
+
s mm8.chrM 1744 113 + 16299 AACAAGAA----TTCCAATTCTC---------------CA--GGCATACGCG-TATAACA----A---CTCGGATA-ACC--ATTGTTAGTTAATCAGACT------------ATAGGC-----A-------ATAATCACA-CTATA-AATAATCCACCTATAACTT-CT-CT---
|
|
270
|
+
s galGal2.chrM 3022 103 + 16775 AATCTGGA-----ACCTATCCTC---------------CTACGGCGTAAACT-TACATTA----A--------TAC-ATT--ATTAACAGAAC-TCAACTT------------ATACCC-----C--------CACACTAA-CAAGC-AAT-ACGTAT---TCCTCA-AT-CT---
|
|
271
|
+
i galGal2.chrM C 0 C 0
|
|
272
|
+
s monDom4.chrUn 117153172 110 + 174229318 AATAAGAA------CTCATTCTC---------------CT--TGCATAAGCC-TAAGTTA----GCCAACGGATTA-CCC--ACTAACACCTA-ACAAATAC----------AATATCT-----T--------TAATT-AA-CAACC-AGTGAATTAC---CCCAAT-AA-TT---
|
|
273
|
+
i monDom4.chrUn C 0 C 0
|
|
274
|
+
s echTel1.scaffold_181343 1001 107 + 18297 AACAAGAGA---ATAAATCTCTC---------------CC--CGCACAAGTA-TATATCA----G---AACGAATA-CTC--GCTGATAATTA-ACAACCT-----------AGTAATT----------------ATACAA-ACTCT-AGACTATTAT---ATTTAC-AC-TT---
|
|
275
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
276
|
+
s loxAfr1.scaffold_36650 4752 106 + 16266 AATAAGAA------GTATTTCTC---------------CC--TGCATAAGCT-TATATCA----G---GTCGGATG-CCC--GCTGATAGTTA-ACAACCG-----------AATAATT-----A---------GATACAA-AAATA-GAACCTTTAT---TATACC-AA-TT---
|
|
277
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
278
|
+
s dasNov1.scaffold_23239 5559 109 - 16977 AACAAGAA------TATTTTCTC---------------CG--TGCATAAGTG-TATATCA----G---ACCGGATAGACC--ACTGATAGTTA-ACA---------------AATAGGC-----ACCAAACTACCACCAAA-CAATA-ACAATGCCAT---ACACCT-----T---
|
|
279
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
280
|
+
s canFam2.chrM 1736 110 + 16727 AACAAGAA-----CCATTTTCTC---------------CC--CGCATAAGCT-TATATCA----G-GAACGGATAG-ACC--ACTGATAGTTA-ACAATCT-----------GATAATA-----T--------CAACCCAA-AAATG-AAATACTTAT---CCACCC-CA-TT---
|
|
281
|
+
i canFam2.chrM C 0 C 0
|
|
282
|
+
s bosTau2.chrM 2105 109 + 16338 AACAAGAA-----AAATTTTCTC---------------CT--TGCATAAGTC-TAAGTCA----G-TGCCTGATAA-TAC--TCTGACCACTA-ACAGTC------------AATAAAA-----A--------TAATCCAA-CAATA-AACAATTTAT---TGATTA-TA-CT---
|
|
283
|
+
i bosTau2.chrM C 0 C 0
|
|
284
|
+
s rheMac2.chr5 34437418 121 - 182086969 AACATGAA------GATATTCTCTATTACATAAGCTTACA-CTGCATAAGCC-TACATCA----G---AATAACCC------ACTAACAGTTA-ACAGCCT-----------AATATTA-----A--------TAAACGATATAATA-AGCACCCTAT---TATTTA-CA-CT---
|
|
285
|
+
i rheMac2.chr5 C 0 C 0
|
|
286
|
+
s panTro2.chrM 1730 109 + 16554 AACATGAA------AACATTCTC---------------CT-CCGCATAAGCC-TACATCA----G---ACCAAAAT-ATTAAACTGACAATTA-ACAGCCT-----------AATATCT-----A--------CAATCAAC-CAACA-AGC-CATTAT---TACCCC-CG-CT---
|
|
287
|
+
i panTro2.chrM C 0 C 0
|
|
288
|
+
s hg18.chrM 2313 109 + 16571 AACATGAA------AACATTCTC---------------CT-CCGCATAAGCC-TGCGTCA----G---ATCAAAAC-ACTGAACTGACAATTA-ACAGCCC-----------AATATCT-----A--------CAATCAAC-CAACA-AGT-CATTAT---TACCCT-CA-CT---
|
|
289
|
+
i hg18.chrM C 0 C 0
|
|
290
|
+
s oryCun1.scaffold_116167 4137 110 + 15695 AACAAGAA-----TACTATTCTC---------------CT--TGCACAAGCT-TATATCA----G---ATCGGATG-CCC--ACTGATAGTTA-ACAGCCCT----------AATAGAA-----A--------TAATCCAC-AAATT-AATAATCTAT---TAACTTTCA-CT---
|
|
291
|
+
i oryCun1.scaffold_116167 C 0 C 0
|
|
292
|
+
s rn4.chrM 1738 106 + 16300 AACAAGAA------CCAATCCAC---------------CA--AGCACAAGTGCTAAGACA----A---C-CGGATA-ACC--ATTGTTAATTA-TTGAATC------------ATAGGC-----A--------TAACCCAA-CAATAGAATTACCTATCCCTAACTC---------
|
|
293
|
+
i rn4.chrM C 0 C 0
|
|
294
|
+
s tetNig1.chrUn_random 103511543 130 + 171761319 AATAAG--GGGCCAGACCCCCTC---------------CA--AGCACAAGTG-TACATCG----G---AACGAACT-CGC--ACCGAAGACTA-ACGAACCCAACCAAAGAGGGCAATGAATATC--------AAACCAAA-CAACA-AGAAAAACAT---TCACAA-CC-CCACC
|
|
295
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
296
|
+
s danRer4.chrM 2755 127 + 16596 AACAAGAAGAACCTGTACTTCTC---------------CA--AGCACAAGTG-TAAGCCAAGTTG---GACAAAC----C--ATTGGCAATTA-ACGAGCCCAAACAAAGAGGGCAATG-----T--------GAGTTAAA-AACTG-AGAAAA--AT---CCACAA-CAGACATC
|
|
297
|
+
i danRer4.chrM C 0 C 0
|
|
298
|
+
e xenTro2.scaffold_18215 896 106 + 3330 M
|
|
299
|
+
|
|
300
|
+
a score=2385506.000000
|
|
301
|
+
s mm8.chrM 1857 323 + 16299 GTTAACCCAACACCGGAATGC---C-T----AAAGGAAAGATCCAAAAAGATAAAAGGAACTCGGCAAA--CAAGAACCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTACAAGT--ATTAGAGGCACTGCCTGCCCAGTGAC-TA---A-A-GTTTaacggccgcggtatcctgaccgtgcaaaggtagcataatcacttgttccttaattagggactagcatgaacggctaaacgagggtccaactgtctcttatctttaatcagtgaaattgacctttcagtgaagaggctgaaatataataataagacgagaagaccctatggagcttaaATT
|
|
302
|
+
s rn4.chrM 1844 320 + 16300 GTTAGCCCAACACAGGCGTGC---T-T----TAAGGAAAGTTTAAAAAAGT--AAAGGAACTCGGCAAA--CACGAACCCCGC-CTGTTTACCAAAAACATCTCCTCTAGC---ATAACAAGT--ATTAGTGGCATCGCCTGCCCAGTGAC-TA---A-A-GTTCCACGGCCGCGGTATCCCGACCGTGCAaaggtaggataatcacttgttccttaattagggactagaatgaatggctaaacgagggtccaaccgtctcttacttgcaatcagtgaaattgaccttccagtgaaggggcggactcataataa-aagacgagaagaccctatggagcttTAATT
|
|
303
|
+
i rn4.chrM C 0 C 0
|
|
304
|
+
s oryCun1.scaffold_116167 4247 324 + 15695 GTTAACCCAACACAGGAGTGC---TAT----ATAGGAAAGATTAAAAGAAGAAAAAGGAACTCGGCAAA--CCCTAACCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTACTAGT--ATTAGAGGCACTGCCTGCCCAGTGAC-GT---A-C-GTTCAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTGGGGACTAGCATGAATGGCAACACGAGGGTTAAACTGTCTCTTTCTTCCAATCAGTGAAATTGACCTCCCCGTGAAGAGGCGGGGATAAAATAATAAGACGAGAAGACCCTATGGAGCTTTAATT
|
|
305
|
+
i oryCun1.scaffold_116167 C 0 C 0
|
|
306
|
+
s hg18.chrM 2422 323 + 16571 GTCAACCCAACACAGGCATGC---T-CA---TAAGGAAAGGTTAAAAAAAGTAAAAGGAACTCGGCAAA--C-CTTACCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATCACCAGT--ATTAGAGGCACCGCCTGCCCAGTGAC-AC---A-T-GTTTAACGGCCGCGGTACCCTAACCGTGCAaaggtagcataatcacttgttccttaaatagggacctgtatgaatggctccacgagggttcagctgtctcttacttttaaccagtgaaattgacctgcccgtgaagaggcgggcatgacacagcaagacgagaagaccctatggagctttaatt
|
|
307
|
+
i hg18.chrM C 0 C 0
|
|
308
|
+
s panTro2.chrM 1839 323 + 16554 GTTAACCCAACACAGGCATGC---C-CA---CAAGGAAAGGTTAAAAAAAGTAAAAGGAACTCGGCAAA--T-CTTACCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTACCAGT--ATTAGAGGCACCGCCTGCCCGGTGAC-AT---A-T-GTTTAACGGCCGCGGTACCCTAACCGTGCAaaggtagcataatcacttgttccttaaatagggacttgtatgaatggctccacgagggtttagctgtctcttactttcaaccagtgaaattgacctacccgtgaagaggcgggcataacataacaagacgagaagaccctatggagcttTAATT
|
|
309
|
+
i panTro2.chrM C 0 C 0
|
|
310
|
+
s rheMac2.chr5 34437539 315 - 182086969 GTTAACCCAACAAAGGCATGC---T-C----TAAGGAAAGTTTACAAAAAGTGAAAGGAACTCAGCAAA--T-CTTACCCTGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTACCAGT--ATTAGAGGCACTGCCTGCCCAGTGAC-GT---A-T-GTTCAACAGCTGCCATATCCTGACCATGCAAAGGTAGCATAATCACTTGTTCCCTAAGTAGGCACTTGTATGAATTGCTACACGAGGGTTCATCAGTCTCTTACTTT-------TGAAATTGACCTATCCGTGAAGAGATGGATATAAACAAATAAGATGAGAAGACCCTATGGAGCTTTAATT
|
|
311
|
+
i rheMac2.chr5 C 0 I 384
|
|
312
|
+
s bosTau2.chrM 2214 324 + 16338 GTTAACCCAACACAGGAGTGC---A-TC---TAAGGAAAGATTAAAAGAAGTAAAAGGAACTCGGCAAA--CACAAACCCCGC-CTGTTTACCAAAAACATCACCTCCAGC---ATTCCCAGT--ATTGGAGGCATTGCCTGCCCAGTGAC-AA---C-T-GTTTAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATCATTTGTTCTCTAAATAAGGACTTGTATGAATGGCCGCACGAGGGTTTTACTGTCTCTTACTTCCAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATGCACAAATAAGACGAGAAGACCCTATGGAGCTTTACCT
|
|
313
|
+
i bosTau2.chrM C 0 C 0
|
|
314
|
+
s canFam2.chrM 1846 324 + 16727 GTTAACCCAACACAGGTATGC---A-TT---CAAGGAAAGATTAAAAGGAGTAAAAGGAACTCGGCAAA--CACAAACCCCGC-CTGTTTACCAAAAACATCACCTCCAGC---ATTTCTAGT--ATTGGAGGCACTGCCTGCCCGGTGAC-AC---T-T-GTTTAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATCATTTGTTCTCTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTTAACTGTCTCTTACTCCCAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATACCACAATAAGACGAGAAGACCCTATGGAGCTTTAATT
|
|
315
|
+
i canFam2.chrM C 0 C 0
|
|
316
|
+
s dasNov1.scaffold_23239 5668 327 - 16977 GTTAATCCAACACAGGCATGC---A-TAACTAACGGAAAGATTTAAAGGAATAGAAGGAACTCGGCAAA--CACGAATCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTACAATT--ATTAGAGGCACCGCCTGCCCAGTGAC-AC---A-C-GTTTAACGGCCGCGGTACCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCTCTAATTAAGGACCCGTATGAATGGCTAAACGAGGTTTCTACTGTCTCCTATTCCCTATCAGTAAAATTGACCTTCCCGTGAAGAGGCGGGAATAATCATATAAGACGAGAAGACCCTGTGGAGCTTAAATT
|
|
317
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
318
|
+
s loxAfr1.scaffold_36650 4858 324 + 16266 GTTAACCCAACACAGGCATGC---T-T----AAGGGAAAGATTAAAAGAAGGAAAAGGAACTCGGCAAA--CACAAACCCCGC-CTGTTTACCAAAAACATCACCTCGAGC---ATTACTAGT--ATTCGAGGCACTGCCTGCCCAGTGAC-CA---AGC-GTTAAACGGCCGCGGTACTCTGACCGTGCAAAGGTAGCATAATCATTTGTTCCTTAATTAGGGACTTGTATGAACGGCCACACGAGGGTTTAACTGTCTCTTTCCTCTAATCAATGAAATTGACCTTCTCGTGAAGAGGCGAGAATAAACATATAAGACGAGAAGACCCTATGGAGCTTAAATT
|
|
319
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
320
|
+
s echTel1.scaffold_181343 1108 326 + 18297 GTTAACCCAACACAGGAGTGCACTC-T----AAAGGAAAGATAAAAAGAAGTAAAAGGAACTCGGCAAA--CTAAAATCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTACTAGT--ATTGGAGGCACTGCCTGCCCAGTGAC-CC---A-T-GTTTAACGGCCGCGGTACTCTGACCGTGCAAAGGTAGCATAATCATTTGTTCTCTAAATAAGGACTTGTATGAATGGCAACACGAGGATTTAACTGTCTCTTACTTCTTATCAGTGAAATTGACCTCCCCGTGAAGAGGCGGGGATTAGAACATAAGACGAGAAGACCCTATGGAGCTTAAATT
|
|
321
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
322
|
+
s monDom4.chrUn 117153282 327 + 174229318 GTTAACCCAACACAGGCATGC---A-CTACTAAAGGACAGATTAAAAAGAATAAAAGGAACTCGGCAAA--CCAAAACCCCGC-CTGTTTACCAAAAACATCACCTCTAGC---ATTTCAAGT--ATTAGAGGCACTGCCTGCCCAGTGAA-TT---A-A-TTTTaacggccgcggtatcctgaccgtgcaaaggtagcataatcacttgtctcctaaatagagacttgtatgaatggcaaaacgagggtttaactgtctctttttctcaatcaatgaaattgacctacccgtgcagaggcgggtataactttataagacgagaagaccctgtggagcttaaAAT
|
|
323
|
+
i monDom4.chrUn C 0 I 9
|
|
324
|
+
s galGal2.chrM 3125 327 + 16775 GTTAAGCCAACCCAGGAGCGC---C------CACAGGATGATTAAAACCTACAGAAGGAACTCGGCAAA--CCAAAGACCCGA-CTGTTTCCCAAAAACATAGCCTTCAGCT-AACAACAAGT--ATTGAAGGTGATGCCTGCCCAGTGAC-CCCCAA-A-GTTCAACGGCCGCGGTATCCTAACCGTGCGAAGGTAGCGCAATCAATTGTCCCGTAAATTGAGACTTGTATGAATGGCTAAACGAGGTCTTAACTGTCTCCTGTAGGTAATCTATGAAATTAGTATTCCCGTGCAAAAACGAGAATGTGAACATAAGACGAGAAGACCCTGTGGAACTTTAAAA
|
|
325
|
+
i galGal2.chrM C 0 C 0
|
|
326
|
+
s xenTro2.scaffold_18215 1002 327 + 3330 GTTAACCTAACACAAGAGCAT---T------TAAAGAAAGATTAAAAGATGCAGAAGGAACTCGGCAAA--AGTGAACCCCGCNCTGTTTACCAAAAACATCGCCTCTTGCCAAACAACACGT--ATAAGAGGTCCAGCCTGCCCAGTGACTAT---A-T-GTTCAACGGCCGCGGTATTCTGACCGTGCAAAGGTAGCGTAATCACTTGTCTTTTAAATAAAGACTGGTATGAATGGCACCACGAAGGTTCAACTGTCTCCTGCATCCAATCCATTAAACTGACCTCCCCGTGCAGAGGCGGGGATATTCCCATAAGACGAGAAGACCCTATGGAGCTTTAAAC
|
|
327
|
+
i xenTro2.scaffold_18215 M 106 C 0
|
|
328
|
+
s tetNig1.chrUn_random 103511673 329 + 171761319 GTTAACCCTACACTGGCGTGC---C-TA---ATTGGAAAGACTTAAAGAAAAAGAAGGAACTCGGCAAACCCATAAGCCTCGC-CTGTTTACCAAAAACATCGCCTCTTGC---AAAAACAATGAATAAGAGGTCCCGCCTGCCCTGTGAC-TA---T-ACGTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCCTTTAAATGGGGACCTGTATGAATGGCACGACGAGGGCTTAACTGTCTCCTTTTTCAAGTCAATGAAATTGATCTTTCCGTGCAGAAGCGGGAATAAAAACATAAGACGAGAAGACCCTATGGAGCTTTAGAC
|
|
329
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
330
|
+
s danRer4.chrM 2882 324 + 16596 GTTACCCCCACACTGGAGTGC---A-TA---TAAGGAAAGACTAAAAGAAAGGGAAGGAACTCGGCAAA--CACAAGCCTCGC-CTGTTTACCAAAAACATCGCCTCCTGA---CATCCCAAT--ATAGGAGGTCCAGCCTGCCCAGTGAC-AA---T-A-GTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTCGTCCTTTAAATAGGGACCTGTATGAATGGCCAAACGAGGGCTTAACTGTCTCCCCCATCAAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGATATAATAATACAAGACGAGAAGACCCTTTGGAGCTTAAGGT
|
|
331
|
+
i danRer4.chrM C 0 C 0
|
|
332
|
+
|
|
333
|
+
a score=-149774.000000
|
|
334
|
+
s mm8.chrM 2180 39 + 16299 ATATAACTT-A--TCTATTTAATTTATTAAACCT--AAT------GGCCC
|
|
335
|
+
s rn4.chrM 2164 37 + 16300 TACTAATTT-----CAATTTATATAAAAAAACCT--AAT------GGGCG
|
|
336
|
+
i rn4.chrM C 0 C 0
|
|
337
|
+
s oryCun1.scaffold_116167 4571 41 + 15695 ATTTAACCC-A--ACACTTCCTTTATTCTACTCTACAAT------GAGCC
|
|
338
|
+
i oryCun1.scaffold_116167 C 0 C 0
|
|
339
|
+
s panTro2.chrM 2162 37 + 16554 CATTAATGCAA--ACAAT---ACTTAACAAACCT--ACA------GGTCC
|
|
340
|
+
i panTro2.chrM C 0 I 2
|
|
341
|
+
s hg18.chrM 2745 37 + 16571 taTTAATGCAA--ACAGT---ACCTAACAAACCC--ACA------GGTCC
|
|
342
|
+
i hg18.chrM C 0 I 2
|
|
343
|
+
s bosTau2.chrM 2538 17 + 16338 -------------------------AACCAACCC--AAA------GAGAA
|
|
344
|
+
i bosTau2.chrM C 0 I 21
|
|
345
|
+
s canFam2.chrM 2170 23 + 16727 -------------------------AACTAACCC--AAACTTATGGATAC
|
|
346
|
+
i canFam2.chrM C 0 I 18
|
|
347
|
+
s dasNov1.scaffold_23239 5995 38 - 16977 AACTAGATC-A--GCAATATCAACATATCCATCA--ACA------GATA-
|
|
348
|
+
i dasNov1.scaffold_23239 C 0 I 1
|
|
349
|
+
s loxAfr1.scaffold_36650 5182 37 + 16266 AACTAATTTAA--TTGCT---AGCCTATAAATCT--ATA------AGATA
|
|
350
|
+
i loxAfr1.scaffold_36650 C 0 I 1
|
|
351
|
+
s echTel1.scaffold_181343 1434 35 + 18297 AA-TAACCCAA--TTGTT----TCTCACAAAACC--AAA------AGGCA
|
|
352
|
+
i echTel1.scaffold_181343 C 0 I 1
|
|
353
|
+
s monDom4.chrUn 117153618 28 + 174229318 AATTAATTTAT--ACTAT-----------ACCCT--AAG------GGAT-
|
|
354
|
+
i monDom4.chrUn I 9 C 0
|
|
355
|
+
s galGal2.chrM 3452 29 + 16775 -------------TCACGACCACCTTACAACCTT--ACA------CAGCC
|
|
356
|
+
i galGal2.chrM C 0 I 11
|
|
357
|
+
s xenTro2.scaffold_18215 1329 36 + 3330 ---TTACGGCA--ACTGCTAAACAATCCAACCCC--ACA------CGGG-
|
|
358
|
+
i xenTro2.scaffold_18215 C 0 I 4
|
|
359
|
+
s tetNig1.chrUn_random 103512002 26 + 171761319 -----ATAAAA--CAGATCACGTCAAACACCCT-----------------
|
|
360
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
361
|
+
s danRer4.chrM 3206 28 + 16596 -----ACAAGATTTAATTTACATCAAGCAAACC-----------------
|
|
362
|
+
i danRer4.chrM C 0 C 0
|
|
363
|
+
e rheMac2.chr5 34437854 384 - 182086969 I
|
|
364
|
+
|
|
365
|
+
a score=88545.000000
|
|
366
|
+
s mm8.chrM 2219 80 + 16299 ------------AAAA-------------ACTATAG---TATAAGT---T-TG-------AAATTTCGGTTGGGGTGACCTCGGAGAATAAAAAATCCTCC-----GAAT-----GA----------------TTATAACCTAGA
|
|
367
|
+
s rn4.chrM 2201 83 + 16300 ------------AAAACA-----------ACAAAAT---TATGAAC---TACC-------AAATTTCGGTTGGGGTGACCTCGGAGAATAAAAAATCCTCC-----GAAT-----GA----------------TTATAACCGAGT
|
|
368
|
+
i rn4.chrM C 0 C 0
|
|
369
|
+
s oryCun1.scaffold_116167 4612 83 + 15695 ------------TAACCA-----------AGGAAAT--CCCTGGGT---T-AA-------AAATTTTGGTTGGGGTGACCTCGGAGTATAAATCAACCTCC-----GAAT-----GA----------------TTTTAGCCTAGA
|
|
370
|
+
i oryCun1.scaffold_116167 C 0 C 0
|
|
371
|
+
s hg18.chrM 2784 79 + 16571 --------------AACT-----------ACCAAA----CCTGCAT---T-AA-------AAATTTCGGTTGGGGCGACCTCGGAGCAGAACCCAACCTCC-----GAGC-----AG----------------TACATGCTAAGA
|
|
372
|
+
i hg18.chrM I 2 C 0
|
|
373
|
+
s panTro2.chrM 2201 79 + 16554 --------------AACT-----------ATTAAA----CCTGCAT---T-AA-------AAATTTCGGTTGGGGCGACCTCGGAGCACAACCCAACCTCC-----GAGC-----AA----------------TACATGCTAAGA
|
|
374
|
+
i panTro2.chrM I 2 C 0
|
|
375
|
+
s rheMac2.chr5 34438238 81 - 182086969 --------------aaaa-----------aatata----tatatatatat-at-------atatGTTGGTT-GGGTGACCCCGGAGCATAATTCAACCTCC-----GAAC-----GA----------------CCTAAACTAAGA
|
|
376
|
+
i rheMac2.chr5 I 384 C 0
|
|
377
|
+
s bosTau2.chrM 2576 83 + 16338 --------------AACA-----------ACAATCT--CCATGAGT---T-GG-------TAGTTTCGGTTGGGGTGACCTCGGAGAATAAAAAATCCTCC-----GAGC-----GAT-----------T---TTAAAGACTAGA
|
|
378
|
+
i bosTau2.chrM I 21 C 0
|
|
379
|
+
s canFam2.chrM 2211 85 + 16727 --------------AACATAA-------CACCATTA--TTATGAGT---T-AG-------CAATTTAGGTTGGGGTGACCTCGGAATATAAAAAAACTCCC-----GAGT-----GA----------------TTAAAATTTAGA
|
|
380
|
+
i canFam2.chrM I 18 C 0
|
|
381
|
+
s dasNov1.scaffold_23239 6034 80 - 16977 ------------AAAACA-----------GAATGA----TATGAAC---T-AT-------TAATTTTGGTTGGGGTGACCTCGGAGCACAGCAAAACCTCC-----GAAT-----GA-----------------CAGCGCCAAGA
|
|
382
|
+
i dasNov1.scaffold_23239 I 1 C 0
|
|
383
|
+
s loxAfr1.scaffold_36650 5220 84 + 16266 --------------AACT-----------A-AACAG---CATGATAAATT-AA-------CAATTTTGGTTGGGGTGACCTCGGAGAAGAAAAAATCCTCC-----GAAC-----GAT-----------A---TTATAATTTAGA
|
|
384
|
+
i loxAfr1.scaffold_36650 I 1 I 1
|
|
385
|
+
s echTel1.scaffold_181343 1470 81 + 18297 --------------AACT-----------ATAACTA---TATGGAG-----AA-------AGATTTCGGTTGGGGTGACCTCGGAGCATAATTAAACCTCC-----GAAT-----GAT-----------A---TATACATCTAGA
|
|
386
|
+
i echTel1.scaffold_181343 I 1 M 388
|
|
387
|
+
s monDom4.chrUn 117153646 83 + 174229318 ------------------TAATCT----TACAAAAC--TTTTTAAG---C-TG-------AATTTTTGGTTGGGGTGACCTCGGAGCACAAGCAACCCTCC-----GAAT-----GA-----------------CATAACTAAGA
|
|
388
|
+
i monDom4.chrUn C 0 C 0
|
|
389
|
+
s galGal2.chrM 3492 96 + 16775 ---------------------ACCCACACATAAACC---CCTGGTC---G-AC-------ATTTTTCGGTTGGGGCGACCTTGGAGAAAAAAAAATCCTCC-----AAACCCACAGACCAC------AAC---TCTTCACTAAGA
|
|
390
|
+
i galGal2.chrM I 11 C 0
|
|
391
|
+
s xenTro2.scaffold_18215 1369 100 + 3330 ------------CAGACA-----------ATTAAGCAACAATGACC---T-AA-------AGTTTTCGGTTGGGGCGACCACGGAGAAAAAAAAATCCTCCTTGATGTAC-----GGGGCCT---TACCC---TCTTAACCAAGA
|
|
392
|
+
i xenTro2.scaffold_18215 I 4 C 0
|
|
393
|
+
s tetNig1.chrUn_random 103512028 111 + 171761319 TAGATAAAAGAACAAACT-----------------A---AGTGAGC---C-CTGTTCAAATGTCTTTGGTTGGGGCGACCGCGGGGTAACAAAAAACCCCC-----ATGT-----GGAATAAAAACACCCTTTTTAAAACCAAGA
|
|
394
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
395
|
+
s danRer4.chrM 3234 107 + 16596 AATAAAAGTGATTAAACT-----------AGTAAAA---GATAAAC---C-TC-------TACCTTCGGTTGGGGCGACCACGGAGTAAAAAACAACCTCC-----AAGC-----GGAACGGGCACAGCC---CTAAAACCAAGA
|
|
396
|
+
i danRer4.chrM C 0 C 0
|
|
397
|
+
|
|
398
|
+
a score=173589.000000
|
|
399
|
+
s mm8.chrM 2299 79 + 16299 CT---------TACAAGTCA---AAGTAAAATCAACATATCT------TATT------GACCCAGATA---TATTTTGATCAACGGACCAAGTTACCCTAGGGATA
|
|
400
|
+
s rn4.chrM 2284 84 + 16300 CGGTAACCGTGTCCGACCCAGTCAAGTAATACTAA--TATCT------TATT------GACCCAATTA---T----TGATCAACGGACCAAGTTACCCTAGGG-TA
|
|
401
|
+
i rn4.chrM C 0 C 0
|
|
402
|
+
s oryCun1.scaffold_116167 4695 76 + 15695 CC--------CAACAAGTCA---AAGCAATTATAA--TCATA------AATT------GACCCAAATA---A--TTTGATCAACGGAACAAGTTACCCTAGGGATA
|
|
403
|
+
i oryCun1.scaffold_116167 C 0 n 0
|
|
404
|
+
s hg18.chrM 2863 76 + 16571 CT--------TCACCAGTCA---AAGCGA-ACTACTATACTC------AATT------GATCCAA-TA---A--CTTGACCAACGGAACAAGTTACCCTAGGGATA
|
|
405
|
+
i hg18.chrM C 0 C 0
|
|
406
|
+
s panTro2.chrM 2280 76 + 16554 CC--------TCACCAGTCA---AAGCGA-ATTACTACATCC------AATT------GATCCAA-TG---A--CTTGACCAACGGAACAAGTTACCCTAGGGATA
|
|
407
|
+
i panTro2.chrM C 0 C 0
|
|
408
|
+
s rheMac2.chr5 34438319 74 - 182086969 CC--------ACACCAGTCT---ACGCGA-GTTAACACAC---------ATT------GGCCCAATTA---A--TTTGATCAATGGAGTAAGTTATCCTATGGATA
|
|
409
|
+
i rheMac2.chr5 C 0 C 0
|
|
410
|
+
s bosTau2.chrM 2659 72 + 16338 CC---------CACAAGTCA---AATCAC----TCTATCGCT------CATT------GATCCAA-AA---A--CTTGATCAACGGAACAAGTTACCCTAGGGATA
|
|
411
|
+
i bosTau2.chrM C 0 C 0
|
|
412
|
+
s canFam2.chrM 2296 74 + 16727 CC---------CACAAGTCA---AAATAC----AACATCACT------TATT------GATCCAA-TA---ATTTTTGATCAACGGAACAAGTTACCCTAGGGATA
|
|
413
|
+
i canFam2.chrM C 0 C 0
|
|
414
|
+
s dasNov1.scaffold_23239 6114 73 - 16977 CC---------AACCGGTCA---AAGCCC--ATAACGAAACC------AATT------GATCCAA--A---A--ATTGACCAACGGAACCAGTTACCCCAGGGATA
|
|
415
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
416
|
+
s loxAfr1.scaffold_36650 5305 72 + 16266 ---------TCTACAAGTCA---AAATTT-ACTAA--TCGCT------TATT------GACCCAA--T---A--CTTGATCAACGGAACAAGTTACCCTAGGGATA
|
|
417
|
+
i loxAfr1.scaffold_36650 I 1 C 0
|
|
418
|
+
s echTel1.scaffold_49882 2559 71 - 7170 ---------CCTACAAGTCG---CAATTA-A--AA--TCACT------TATT------GACCCAA-TT---A--CTTGAGCAACGGACCAAGTTACCCTAGGGATA
|
|
419
|
+
i echTel1.scaffold_49882 I 1561 C 0
|
|
420
|
+
s monDom4.chrUn 117153729 75 + 174229318 ---------CTAACACATCT---AAGTGCAACCTAAGCCAGT------AATT------GACCCAA--A---A--CTTGATCAACGGAACAAGTTACCCCAGGGATA
|
|
421
|
+
i monDom4.chrUn C 0 C 0
|
|
422
|
+
s galGal2.chrM 3588 72 + 16775 ---------CCAACTCCTCA---AAGTACCAACAG--TAACC------A---------GACCCAATAT---A--ATTGAGCAATGGACCAAGCTACCCCAGGGATA
|
|
423
|
+
i galGal2.chrM C 0 C 0
|
|
424
|
+
s xenTro2.scaffold_18215 1469 80 + 3330 ---------ACGACAGTTCT---AAGTAA---CAAAACATTTGACCACTATT------GATCCAGTCC---A--ACTGATCAACGAACCAAGTTACCCTAGGGATA
|
|
425
|
+
i xenTro2.scaffold_18215 C 0 C 0
|
|
426
|
+
s tetNig1.chrUn_random 103512139 79 + 171761319 ---------GCCACCGCTCT---AATGAA---CAGAACATCT------GACCAATCA-GATCCGGCCT---A--GCCGATCAACGAACCGAGTTACCCTAGGGATA
|
|
427
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
428
|
+
s danRer4.chrM 3341 83 + 16596 ---------GAAACATCTCT---AAGCCT---CAGAACACCT------GACCAAAGACGATCCGGCCTATAA--GCCGATCAACGAACCAAGTTACCCTAGGGATA
|
|
429
|
+
i danRer4.chrM C 0 C 0
|
|
430
|
+
|
|
431
|
+
a score=1521193.000000
|
|
432
|
+
s mm8.chrM 2378 161 + 16299 ACAGCGCAATCCTATTTAA-GAGTTCATATCGACAATTAGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCCAATGGTGTAGAAGCTATTAATGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTT
|
|
433
|
+
s rn4.chrM 2368 153 + 16300 ACAGCGCGA-CCTATTTAA-GAGTTCATATCGACAATTAGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCCAATGGTGCAGAAGCTATTAATGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTAAGTCCGG-------CAATCCAGGTCGGTT
|
|
434
|
+
i rn4.chrM C 0 C 0
|
|
435
|
+
s oryCun1.scaffold_205008 2 161 - 118789 ACAGCGCAATCCTATTTTA-GAGTCCCTATCGACAATAGCGGTTTAC-GACCTCGATGTTGGATCAGGACATCCCAATGGTGTAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGAAATCCAGGTCGGTT
|
|
436
|
+
i oryCun1.scaffold_205008 n 0 C 0
|
|
437
|
+
s hg18.chrM 2939 160 + 16571 ACAGCGCAATCCTATTCTA-GAGTCCATATCAACAAT-AGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTT
|
|
438
|
+
i hg18.chrM C 0 C 0
|
|
439
|
+
s panTro2.chrM 2356 160 + 16554 ACAGCGCAATCCTATTCCA-GAGTCCATATCAACAAT-AGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTT
|
|
440
|
+
i panTro2.chrM C 0 C 0
|
|
441
|
+
s rheMac2.chr5 34438393 161 - 182086969 ACAACAAAATCCTATTCTAGGATTCCCTATTGGCAAT-AGGGTTTAC-AACCTCGATGTTGGATCAGGACATCCTAATGGTGTAGCTGCTATTAAGGGTTCATTTATTCAATGATTAA-AGTCCTACCTGATCTGAGTTCAGACCGGAGTAATCCAGGTTGGTT
|
|
442
|
+
i rheMac2.chr5 C 0 C 0
|
|
443
|
+
s bosTau2.chrM 2731 160 + 16338 ACAGCGCAATCCTATTCAA-GAGTCCATATCGACAAT-AGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCTGATGGTGCAACCGCTATCAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTT
|
|
444
|
+
i bosTau2.chrM C 0 C 0
|
|
445
|
+
s canFam2.chrM 2370 160 + 16727 ACAGCGCAATCCTATTCAA-GAGTCCATATCGACAAT-AGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCAGCTATTAAGGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTT
|
|
446
|
+
i canFam2.chrM C 0 C 0
|
|
447
|
+
s dasNov1.scaffold_23239 6187 160 - 16977 ACAGCGCAATCCTATTCCA-GAGCCCATATCAACAAT-AGGGTTTAC-GACCTCGATGTTGGATCAGGACACCCAAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTT
|
|
448
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
449
|
+
s loxAfr1.scaffold_36650 5377 160 + 16266 ACAGCGCAATCCTACTCTA-GAGTCCCTATCGACAGC-AGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTT
|
|
450
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
451
|
+
s echTel1.scaffold_49882 2630 161 - 7170 ACAGCGCAATCCTATTTAA-GAGTTCATATCGACGAT-AGGGTTTACTGACCTCGATGTTGGATCAGGACACCCAGATGGTGCAACAGCTATCAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTT
|
|
452
|
+
i echTel1.scaffold_49882 C 0 I 1469
|
|
453
|
+
s monDom4.chrUn 117153804 161 + 174229318 ACAGCGCAATCCTATTTAA-GAGCCCATATCGACAATTAGGGTTTAC-GACCTCGATGTTGGATCAGGACACCCCAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGAAATCCAGGTCGGTT
|
|
454
|
+
i monDom4.chrUn C 0 C 0
|
|
455
|
+
s galGal2.chrM 3660 161 + 16775 ACAGCGCAATCTCCTCCAA-GAGCCCATATCGACAAG-GAGGTTTAC-GACCTCGATGTTGGATCAGGACAACCTAATGGTGCAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAACAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTT
|
|
456
|
+
i galGal2.chrM C 0 C 0
|
|
457
|
+
s xenTro2.scaffold_18215 1549 160 + 3330 ACAGCGCAATCCATTTCGA-AAGTTCCTATCGACAAA-TGGGTTTAC-GACCTCGATGTTGGATCAGGGCATCCCAGTGGTGCAGCCGCTACTAAAGGTTCGTTTGTTCAACGATTAA-AGCCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTT
|
|
458
|
+
i xenTro2.scaffold_18215 C 0 C 0
|
|
459
|
+
s tetNig1.chrUn_random 103512218 160 + 171761319 ACAGCGCAATCCTCTTTTA-GAGCCCATATCGACAAG-AGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAA-AGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTT
|
|
460
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
461
|
+
s danRer4.chrM 3424 161 + 16596 ACAGCGCAATCCTCTCTAA-GAGTCCATATCGACGAG-GGGGTTTAC-GACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAATAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTT
|
|
462
|
+
i danRer4.chrM C 0 C 0
|
|
463
|
+
|
|
464
|
+
a score=51271.000000
|
|
465
|
+
s mm8.chrM 2539 136 + 16299 TCTATCTATTTAC--G-ATTTCTCCC-AGT-ACGAAAGGACAAGAGAAATAGAGCC-ACCTTACAAATAAG-CG--CTCTCAACT----TAATTTATGAATAAAATCTAAAT--AAAA---TAT---ATACG---T-ACACCCTCT---AACCTAGAGA----AGGTT-
|
|
466
|
+
s rn4.chrM 2521 132 + 16300 TCTATCTATTTAC--A-ATTTCTCCC-AGTTACGAAAGGACAAGAGAAATGGAG---ACCAACCAATCCTA-GG--CTTCCAACC-----AATTTAG----AAAAACTTAAT--AAAG---TAT---ATATG---T-ACAATAAAT---AACCT-TAGACCC-AAGTT-
|
|
467
|
+
i rn4.chrM C 0 C 0
|
|
468
|
+
s oryCun1.scaffold_205008 163 136 - 118789 TCTATCTATTAAG--T-ATTTCTCCC-AGT-ACGAAAGGACAAGAGAAATAGAGCCTACTGCACCA--CAG-AG--CTCTAAGTC----CAAAAGATGAA-ATAATCTTAAT--CTAG---TAC---ACTTA---C-CCAACATAG---AGCCC-TAGACCA-GAGCT-
|
|
469
|
+
i oryCun1.scaffold_205008 C 0 C 0
|
|
470
|
+
s hg18.chrM 3099 129 + 16571 TCTATCTACTTCA--A-ATTCCTCCC-TGT-ACGAAAGGACAAGAGAAATAAGGCCTACTTCACAA---AG-CG-CCTTCCCCCG----TAAATGAT----ATCATCTCAAC--TTAGTATTAT---ACCCA---C-ACCCAC---------CC-AAGAACA-GGGT--
|
|
471
|
+
i hg18.chrM C 0 I 89
|
|
472
|
+
s panTro2.chrM 2516 117 + 16554 TCTATCTGTTCTA--A-ATTTCTCCC-TGT-ACGAAAGGACAAGAGAAATGAGGCCTACTTCACAA---AG-CG-CCTTCCCCAA----TAAATGAT----ATTATCTCAAT--TTAGCGCCAT---GCCAA---C-ACCCACT-------------------------
|
|
473
|
+
i panTro2.chrM C 0 I 92
|
|
474
|
+
s rheMac2.chr5 34438554 132 - 182086969 TCTATATATTTAA--T-ATTTCTCCT-AGT-ATGAAAGGACAAGAGAAATAGGGCCCACTTCATAA---AG-TGCCCTTGCCGCA----TAAATGAT----GCTATCTCTGT--CTAA---CAA---ACCAT---C-ACACACCCT---A-CCC-AGAAACA-GGGT--
|
|
475
|
+
i rheMac2.chr5 C 0 I 2
|
|
476
|
+
s bosTau2.chrM 2891 130 + 16338 TCTATCTATTACG--T-ATTTCTCCC-AGT-ACGAAAGGACAAGAGAAATAAGGCCAACTTTAAAT-CAAG-CG--CCTTAAGAC-----AACCAATGAT-AACATCTCAA---CTGA---CAA---CACAA---A-ACCCT--------GCCC-TAGAACA-GGGCT-
|
|
477
|
+
i bosTau2.chrM C 0 I 2
|
|
478
|
+
s canFam2.chrM 2530 138 + 16727 TCTATCTATTATA--CAACCTCCCCC-AGT-ACGAAAGGACAAGGGATGTAAGGCCTACCTCACAG--AGG-CG--CCTTAAAAC----TAATAGATGAA-GTCAACTCAAT--CTAA---CCA---GTTTA---T-CTCCTCATA---AGCCC-GAGAAAAGGGGCT-
|
|
479
|
+
i canFam2.chrM C 0 I 2
|
|
480
|
+
s dasNov1.scaffold_23239 6347 137 - 16977 TCTATCTATAACC--A-ATTTCTCCC-AGT-ACGAAAGGACAAGAGAAATAAGGCCAACTTTACAA-GAGG-CG-CCTTAAATCA----AAATAGATGAA-ATAATCTCAAC--CTAA---AAC---AT-TA---C-ATAAACATT---AGTCC-TAAGCCA-GGACC-
|
|
481
|
+
i dasNov1.scaffold_23239 C 0 I 2
|
|
482
|
+
s loxAfr1.scaffold_36650 5537 134 + 16266 TCTATCTATAGTT--T-ATTTATTCC-AGT-ACGAAAGGACAGAAAAAATGAGGCCAATCTTACCA---AGACG--CCTCCAGCT----AAATTTATGAA-TAAATCTCAAT--CTAG-----------ATAAGCT-AAACCACCC---AATCC-AAGAACA-GGATT-
|
|
483
|
+
i loxAfr1.scaffold_36650 C 0 I 1
|
|
484
|
+
s echTel1.scaffold_181343 1939 126 + 18297 TCTATCTATTTTA--T-ATCTCCTCCTAGT-ACGAAGGACCAGAGAGA---TAGCCACTTTCAACC---AG-CG--CCTTAA--C----AAACCAATGAT-ATAATCTTAAT--TTAC-----------CTA---T-ATCCATTTC---TGCTC-TAGATAA-GAGCT-
|
|
485
|
+
i echTel1.scaffold_181343 M 388 I 1
|
|
486
|
+
s monDom4.chrUn 117153965 135 + 174229318 TCTATCTATATAA--TAATTTCTCCT-AGT-ACGAAAGGACAAGAGAATTAAGGCCAACATTACAA--ACA-AG--CCTTACAAC----TAACTAATGAT-CTTATCTCAAT--TAGT---TAA---TGCAA---G-ATTTTATT-----ACTC-TAGAGAA-GAGTT-
|
|
487
|
+
i monDom4.chrUn C 0 C 0
|
|
488
|
+
s galGal2.chrM 3821 142 + 16775 TCTATCTATGGAC----ACTCCTCCT-AGT-ACGAAAGGACCGGAGAAGTGGGGTCAATACCACTG---AG-CA--CACCCCAACCTTCTAAGCAATGAA-TACAACTCAACTGCCAA---GAA---CCCCT---C-CCCCACACCCGAACTCC-TAGAAAA-GGAT--
|
|
489
|
+
i galGal2.chrM C 0 I 3
|
|
490
|
+
s xenTro2.scaffold_18215 1709 136 + 3330 TCTATCTATGCAG--T-ATTTTCTCT-AGT-ACGAAAGGACCGAGAAAATGAGGTCTATGTCACAA--ACA-AG--CCTCCTCCC----TTATCAATGAA-AACAACTTAAT--TGAA---TAA---AGGAC---T-AACAACTTC---AGCCC-AAGATAA-GGGCT-
|
|
491
|
+
i xenTro2.scaffold_18215 C 0 M 690
|
|
492
|
+
s tetNig1.chrUn_random 103512378 139 + 171761319 TCTATCTATGAAG-TG-CCCTTTTCT-AGT-ACGAAAGGACCGAAAAGGAGAGACCCCTGCCAAAA--GCA-CG--TCCCCCTCT----CACCCGTTGTC-TCCAACTAAAA--CAGA---CAA---GAGAG---CACACAACAAC---AGCCA-AAGAACA-TGACAT
|
|
493
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
494
|
+
s danRer4.chrM 3585 141 + 16596 TCTATCTGTAAAGCTA-TTTTTTCCT-AGT-ACGAAAGGATCGGAAAAAGGGGGCCCATACTAAAA--GCA-CG--CCCCACCCT----AAATTTATGAA-TAAAGATAAAA--AAAA---TAAAAGGAGAG---C-TAAAACCTC---TTCCC-GA-AATA-AGGGTT
|
|
495
|
+
i danRer4.chrM C 0 C 0
|
|
496
|
+
|
|
497
|
+
a score=312226.000000
|
|
498
|
+
s mm8.chrM 2675 76 + 16299 A-ttagggtggcagagccaggaaattgcgtaagacttaaaaccttgttcccagaggttcaaatcctctccctaa-ta--G
|
|
499
|
+
s rn4.chrM 2653 76 + 16300 A-ttagggtggcagagccaagtaattgcgtaagacttaaaaccttgttcccagaggttcaaatcctctccctaa-ta--G
|
|
500
|
+
i rn4.chrM C 0 C 0
|
|
501
|
+
s oryCun1.scaffold_205008 299 79 - 118789 Agttaaggtggcagagcccggtaattgcgtaaaacttaaaactttataaccagaggttcaactcctctccttaa-caATA
|
|
502
|
+
i oryCun1.scaffold_205008 C 0 C 0
|
|
503
|
+
s rheMac2.chr5 34438688 76 - 182086969 -gttaagatggaggagcttggtaattgcataaaacttaaaattttataataagaggttcaactcctcttcttaa-ca--A
|
|
504
|
+
i rheMac2.chr5 I 2 I 2
|
|
505
|
+
s bosTau2.chrM 3023 76 + 16338 -gttaaggtggcagagcccggtaattgcataaaacttaaacttttatatccagagattcaaatcctctccttaa-ca--A
|
|
506
|
+
i bosTau2.chrM I 2 I 2
|
|
507
|
+
s canFam2.chrM 2670 75 + 16727 -gttagggt-gcagggcccggtaactgcgtaaaacttaaacctttactatcagaggttcaattcctctccctaa-ca--A
|
|
508
|
+
i canFam2.chrM I 2 I 2
|
|
509
|
+
s dasNov1.scaffold_23239 6486 76 - 16977 -gttaagatggcagagacaggtaattgcataagacttaaacctttattaccagaggttcaaatcctcttcttaa-ca--t
|
|
510
|
+
i dasNov1.scaffold_23239 I 2 I 3
|
|
511
|
+
s loxAfr1.scaffold_36650 5672 76 + 16266 -gttaagatagcaaaaactggtcactgcataaaacttaagcttttactcacggaggttcaactcctcttcttaa-ca--A
|
|
512
|
+
i loxAfr1.scaffold_36650 I 1 C 0
|
|
513
|
+
s echTel1.scaffold_181343 2066 76 + 18297 -Attaagatggcagagcccggtaattgcacaagacttaaacccttgccgtcagaggttcaatccctcttcttaa-ta--A
|
|
514
|
+
i echTel1.scaffold_181343 I 1 C 0
|
|
515
|
+
s monDom4.chrUn 117154100 75 + 174229318 -Attaaggtggcagag-caggtaattgcataaaacttaagcctttactatcagaggttcaacccctctccttaa-ta--T
|
|
516
|
+
i monDom4.chrUn C 0 I 1
|
|
517
|
+
s galGal2.chrM 3966 75 + 16775 -GCTAGCGTGGCAGAGCTCGGCAAATGCAAAAGGCTTAAGCCCTT-TATCCAGAGGTTCAAATCCTCTCCCTAG-CT--A
|
|
518
|
+
i galGal2.chrM I 3 I 30
|
|
519
|
+
s tetNig1.chrUn_random 103512517 75 + 171761319 -gttagggtggcagagcccggtaaatgcaaaagacctaagcccttt-atacagaggttcaactcctctccttaa-cT--A
|
|
520
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
521
|
+
s danRer4.chrM 3726 77 + 16596 -GCTGGGATGGCAGAGCTCGGTAATTGCAAAAGGCCTAAGCCCTTTCACCCAAAGGTTCAAATCCTTTTCCCAGTTT--A
|
|
522
|
+
i danRer4.chrM C 0 C 0
|
|
523
|
+
e xenTro2.scaffold_18215 1845 690 + 3330 M
|
|
524
|
+
e panTro2.chrM 2633 92 + 16554 I
|
|
525
|
+
e hg18.chrM 3228 89 + 16571 I
|
|
526
|
+
|
|
527
|
+
a score=353365.000000
|
|
528
|
+
s mm8.chrM 2751 92 + 16299 ------------------TGTTCTTTATTAATATCCTAACACTCCTCGTCCCCATTCTAATC---GCCATAGCCTTCCTAACATTAGTAGAACGCAAAATCTTAGGGTACATA
|
|
529
|
+
s galGal2.chrM 4071 92 + 16775 ------------------ACCTTCTAATCATAACCTTATCCTATATTCTCCCCATCCTAATC---GCCGTGGCCTTCTTAACACTTGTAGAACGAAAAATCCTAAGCTACATG
|
|
530
|
+
i galGal2.chrM I 30 C 0
|
|
531
|
+
s monDom4.chrUn 117154176 92 + 174229318 ------------------TGTTCCTAATCAATCTACTAATCTATATTATTCCTATTCTACTA---GCAGTAGCTTTTTTAACATTAATCGAACGAAAAGTCCTAGGTTATATA
|
|
532
|
+
i monDom4.chrUn I 1 C 0
|
|
533
|
+
s echTel1.scaffold_181343 2142 92 + 18297 ------------------TGTTTATTATTAATCTCTTATCACTGATTGTTCCTATCCTCCTA---GCAGTAGCTTTCCTTACACTTCTTGAACGAAAAGTACTAGGATATATG
|
|
534
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
535
|
+
s loxAfr1.scaffold_36650 5748 92 + 16266 ------------------TGTTCTTAATCAATGTCCTAACAGTAACCTTACCTATCCTCCTA---GCAGTAGCCTTCCTTACCTTAGTTGAACGAAAGGCCTTAGGCTATATA
|
|
536
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
537
|
+
s dasNov1.scaffold_23239 6565 92 - 16977 ------------------TGTACTTAATCAATGTTCTATCTCTAATTATCCCAATTCTCCTA---GCAGTAGCCTTCCTAACGTTACTAGAACGAAAAATTCTAGGCTATATA
|
|
538
|
+
i dasNov1.scaffold_23239 I 3 C 0
|
|
539
|
+
s canFam2.chrM 2747 92 + 16727 ------------------TGTTCTTTATCAACATTATCTCTCTTATTATCCCAATCCTTCTT---GCCGTAGCCTTCCTCACCCTCGTTGAACGAAAAGTCTTAGGCTATATA
|
|
540
|
+
i canFam2.chrM I 2 C 0
|
|
541
|
+
s bosTau2.chrM 3101 92 + 16338 ------------------TGTTCATAATTAACATCTTAATACTAATTATTCCCATCCTATTG---GCCGTAGCATTCCTTACGTTAGTGGAACGAAAAGTTCTAGGCTATATA
|
|
542
|
+
i bosTau2.chrM I 2 C 0
|
|
543
|
+
s rheMac2.chr5 34438766 92 - 182086969 ------------------TGCCTTTAATTAACCTTCTCCTACTCATTATCCCCACTCTTATC---GCTATAGCGTTCCTTACACTCATCAAACGAAAAATCTTAGGCTATACA
|
|
544
|
+
i rheMac2.chr5 I 2 C 0
|
|
545
|
+
s hg18.chrM 3317 83 + 16571 ---------------------------CCAACCTCCTACTCCTCATTGTACCCATTCTAATC---GCAATGGCATTCCTAATGCTTACCGAACGAAAAATTCTAGGCTATATA
|
|
546
|
+
i hg18.chrM I 89 C 0
|
|
547
|
+
s panTro2.chrM 2725 92 + 16554 ------------------CACCCATGACCAACCTCCTACTCCTCATTGTACCCATCCTAATC---GCAATAGCATTCCTAATGCTAACCGAACGAAAAATTCTAGGCTACATA
|
|
548
|
+
i panTro2.chrM I 92 C 0
|
|
549
|
+
s oryCun1.scaffold_205008 378 92 - 118789 ------------------TGTTCCTAATTAATACACT---CCTTTTAATCCTACCTGTACTTTTAGCCATAGCATTCCTCACCTTAGTCGAACGAAAAATCTTAGGGTACATA
|
|
550
|
+
i oryCun1.scaffold_205008 C 0 C 0
|
|
551
|
+
s rn4.chrM 2729 92 + 16300 ------------------TGTACTTTATTAATATCCTAACACTCCTAATCCCAATCTTAATT---GCCATAGGCCTTCTCACCCTAGTAGAACGGAAAATCCTAGGCTACATA
|
|
552
|
+
i rn4.chrM C 0 C 0
|
|
553
|
+
s tetNig1.chrUn_random 103512592 110 + 171761319 TGATTACAACCCTCATCACACACATCCTAAACCCTCTTGCCTTTATTGTCCCCGTCCTACTA---GCCGTCGCTTTTCTGACACTCCTAGAACGAAAAGTTCTAGGATACATA
|
|
554
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
555
|
+
s danRer4.chrM 3803 110 + 16596 TGCTAGACATCTTAACAAGCCACTTAATTAACCCCCTAGCCTACGCCGTACCAGTATTAATT---GCAGTAGCCTTCCTTACCTTAGTTGAACGAAAAGTGTTAGGCTATATA
|
|
556
|
+
i danRer4.chrM C 0 C 0
|
|
557
|
+
e xenTro2.scaffold_18215 1845 690 + 3330 M
|
|
558
|
+
|
|
559
|
+
a score=1741996.000000
|
|
560
|
+
s mm8.chrM 2843 346 + 16299 CAACTACGAAAAGGCCCTAACATTGTTGGTCCATACGGCATTTTACAACCATTTGCAGACGCCATAAAATTATTTATAAAAGAACCAATACGCCCTTTAACAAC-CTCTATATCCTTATTTATTATTGCACCTACCCTATCACTCACACTAGCATTAAGTCTATGAGTTCCCCTACCAAT---ACCACACCCA---TTAATTAATTTAAACCTAGGGATTTTATTTATTTTAGCAACATCTAGCCTATCAGTTTACTCCATTCTATGATCAGGATGAGCCTCAAACTCCAAATACTCACTATTCGGAGCTTTACGAGCCGTAGCCCAAACAATTTCATATGAAGTAACCATAG
|
|
561
|
+
s rn4.chrM 2821 346 + 16300 CAATTACGCAAAGGCCCCAACAACGAAGGCCCATATGGTAAACTACAACCATTTGCAGATGCCATAAAACTATTCATAAAAGAACCCATACGCCCTCTAACCAC-CTCAATATCACTATTTATTATCGCCCCAACCCTCTCCCTTACACTAGCTCTAAGCCTATGAATTCCCTTACCAAT---ACCCCACCCC---CTTATCAACCTCAACCTAGGCATACCATTTATTCTAGCCACATCCAGCCTTTCGGTCTACTCCATTCTATGATCGGGATGAGCCTCAAATTCAAAATACTCCCTATTCGGAGCCCTACGAGCCGTTGCCCAAACCATCTCTTACGAAGTCACAATAG
|
|
562
|
+
i rn4.chrM C 0 C 0
|
|
563
|
+
s oryCun1.scaffold_205008 470 347 - 118789 CAACTACGTAAAGGCCCAAACATTGTAGGACCCTATGGCCTCCTCCAACCAATCGCAGACGCTATTAAGCTATTCACTAAAGAACCCCTACGACCCCTAACATCGCTCTCCGCTACTCTTTATTATCGCCCCAACCCTAGCTCTAACTCTCGCACTATCAATGTGACTTCCTATCCCCAT---ACCTTACCCA---CTAGTCAACCTAAATATAGGCATTCTATTCATCCTAGCAACCTCCAGCTTAGCCGTTTACTCAATCCTATGATCAGGATGAGCATCCAACTCAAAATACGCCCTATTTGGTGCTCTCCGAGCAGTCGCACAAACCATTTCCTACGAAGTCACACTTG
|
|
564
|
+
i oryCun1.scaffold_205008 C 0 C 0
|
|
565
|
+
s panTro2.chrM 2817 346 + 16554 CAACTACGCAAAGGTCCCAACATTGTAGGTCCTTACGGGCTATTACAGCCCTTCGCTGACGCCATAAAACTCTTCACTAAAGAACCCTTAAAACCCTCCACTTC-AACCATTACCCTCTACATCACCGCCCCAACCCTAGCCCTCACCATTGCCCTCTTACTATGAACCCCCCTCCCCAT---ACCCAACCCC---CTAGTCAATCTTAACTTAGGCCTCCTATTTATTCTAGCCACCTCCAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAACTCGAACTACGCCTTAATCGGTGCACTACGAGCAGTAGCCCAAACAATCTCATACGAAGTCACTCTAG
|
|
566
|
+
i panTro2.chrM C 0 C 0
|
|
567
|
+
s hg18.chrM 3400 346 + 16571 CAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTACAACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCGCCACATC-TACCATCACCCTCTACATCACCGCCCCGACCTTAGCTCTCACCATCGCTCTTCTACTATGAACCCCCCTCCCCAT---ACCCAACCCC---CTGGTCAACCTCAACCTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCCAAACAATCTCATATGAAGTCACCCTAG
|
|
568
|
+
i hg18.chrM C 0 C 0
|
|
569
|
+
s rheMac2.chr5 34438858 346 - 182086969 CAACTATGCAGAAGACACAGAATTGTCGGTCTCGATGGGCTGCTTCAACCATTCGCTGATGCAATAAAACTTTTCACCAAAGAACCCTTACGGCCTTCAAAATC-TGCTATTACCCTTCACATTATTGCTTCAACACTAGCCTTTTCCATCACTCTCCTCTTATGAACTCCCCTCCCTAT---CCCAGACCCT---CTAATTAATTTTAACATAAGCCTCCTATTTATACTAGCCACATCAAGCCCAGCCGTCTCCTCTATTCTATGATCAGGATGAGCATCTAATTCAAATTATGCACTAATCAGCACATTACGAGCTGTGGCCCAAACAATTTCATATGAGGTCACCTTGG
|
|
570
|
+
i rheMac2.chr5 C 0 C 0
|
|
571
|
+
s bosTau2.chrM 3193 346 + 16338 CAACTCCGAAAAGGTCCAAATGTCGTAGGTCCATATGGCCTACTTCAACCCATCGCCGATGCAATCAAACTTTTCATTAAAGAACCACTACGACCCGCTACATC-TTCAGCCTCAATATTTATCCTAGCACCTATCATAGCTTTAGGCCTAGCCTTAACCATGTGAATTCCCCTACCAAT---ACCCTATCCT---CTTATCAACATAAACCTAGGAGTCCTATTTATACTAGCCATATCAAGCCTAGCCGTATACTCCATTCTCTGATCAGGCTGAGCTTCCAACTCAAAATACGCACTAATCGGAGCCCTACGAGCAGTAGCACAAACAATCTCATACGAAGTAACGCTAG
|
|
572
|
+
i bosTau2.chrM C 0 C 0
|
|
573
|
+
s canFam2.chrM 2839 346 + 16727 CAACTTCGAAAAGGACCTAATATTGTAGGCCCCTACGGCCTCCTTCAACCAATCGCAGACGCAGTAAAACTCTTCACAAAAGAACCTCTACGACCACTTACATC-CTCTATATCAATATTCATCCTAGCCCCCATTCTAGCTCTATCACTAGCCCTAACTATGTGAATTCCCCTCCCAAT---ACCCTACCCA---CTCATTAATATAAACTTGGGAGTCCTATTCATACTAGCAATATCAAGCCTCGCCGTGTACTCCATCCTCTGATCAGGATGAGCCTCAAACTCCAAATACGCCCTAATCGGAGCCCTTCGAGCAGTAGCTCAAACAATCTCATATGAAGTAACGCTAG
|
|
574
|
+
i canFam2.chrM C 0 C 0
|
|
575
|
+
s dasNov1.scaffold_23239 6657 346 - 16977 CAGTTACGTAAAGGCCCAAACATCGTAGGACCATACGGCCTACTACAACCAATCGCAGACGCCATTAAACTATTCATCAAAGAACCACTACGACCAGCCACATC-ATCAAAACTCATATTTACCTTAGCACCCACACTAGCACTAACTCTCGCACTTTCACTTTGAATCCCCATCCCAAT---ACCTTACCCA---TTGGTTAACTTAAATTTAGGGGTACTATTCATTTTAGCCATATCAAGCCTAGCTGTCTATTCAATCTTATGGTCAGGATGAGCATCAAACTCCAAATACGCCCTCATCGGAGCCCTTCGAGCAGTAGCACAAACAATTTCCTACGAAGTAACCCTGG
|
|
576
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
577
|
+
s loxAfr1.scaffold_36650 5840 346 + 16266 CAACTTCGTAAAGGTCCCAATGTAGTAGGACCTTACGGTCTTCTCCAACCTATTGCAGATGCAATCAAGCTATTTACTAAAGAACCCATCTACCCACAAACCTC-ATCAAAATTCCTATTTACCGTCGCCCCAATTCTAGCCCTAACCTTAGCCCTAACTGTATGAGCTCCTCTTCCAAT---ACCATATCCT---CTAATTAACTTAAATCTGAGCCTACTATTCATTCTCGCAATATCAAGTCTGATAGTTTATTCCATCCTATGATCAGGCTGAGCATCAAACTCAAAATATGCCCTCATAGGAGCCCTGCGAGCAGTAGCCCAAACCATCTCCTATGAAGTCTCTATAA
|
|
578
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
579
|
+
s echTel1.scaffold_181343 2234 346 + 18297 CAACTTCGTAAAGGCCCTAACGTTGTTGGCCCATATGGGCTCTTTCAACCATTTGCTGACGCAATCAAACTATTTACTAAAGAACCGCTACGCCCAATGACTTC-ATCTATAACTATATTTTTACTTGCCCCAATCCTAGCGCTATCCCTAGCTCTTACACTGTGGGTTCCTCTGCCAAT---ACCTCATTCC---CTTGTTAATCTTAACCTAAGCCTCTTATTCATCTTAGCCATATCTAGCCTAGCTGTCTACTCTATTCTATGATCAGGATGAGCATCTAACTCCAACTATGCTCTAATTGGCGCACTCCGAGCAGTCGCCCAAACAATCTCTTATGAAGTCTCTCTAG
|
|
580
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
581
|
+
s monDom4.chrUn 117154268 346 + 174229318 CAACTCCGAAAAGGCCCAAACGTTATTGGACCATACGGCATCCTACAGCCATTCGCAGACGCTGTAAAATTATTCACAAAAGAACCCCTCCGACCTCTAACTTC-ATCAATCTCAATATTTATTATTGCACCTATTTTAGCCCTAACCTTAGCTCTAACAATCTGAACCCCTCTACCTAT---ACCCCACACC---CTAATTGACTTAAACCTAGGACTTTTATTTATTTTATCCTTATCAGGACTATCAGTTTACTCAATTCTATGATCAGGATGAGCATCAAATTCTAAATATGCACTCATTGGAGCCTTACGAGCCGTAGCTCAAACAATTTCATACGAAGTCACATTAG
|
|
582
|
+
i monDom4.chrUn C 0 C 0
|
|
583
|
+
s galGal2.chrM 4163 346 + 16775 CAGGCCCGAAAGGGCCCAAACATTGTGGGCCCTTTTGGTCTACTCCAACCCGTTGCAGACGGGGTAAAACTATTCATTAAAGAGCCAATCCGACCATCTACCTC-CTCCCCCTTCCTCTTCATTATTACTCCAATCCTAGCACTACTCCTAGCCCTGACTATTTGAGTCCCCCTCCCACT---ACCATTCCCC---CTTGCAGACCTCAACCTAGGACTACTATTTCTCCTAGCCATATCAAGCCTAACTGTCTACTCTCTACTCTGATCCGGATGAGCATCAAACTCCAAGTATGCCCTAATCGGAGCCCTTCGAGCCGTCGCACAAACAATCTCATACGAAGTCACCCTAG
|
|
584
|
+
i galGal2.chrM C 0 C 0
|
|
585
|
+
s xenTro2.scaffold_8452 11274 352 + 23823 CAAGTGCGCGTGGGCCCGAACCGCGTCGGCCCGCTGGGCCTGCTGCAACCGCTTGCCGATGGCCTGAAGCTCCTGACCAAGGAAATCATCACACCAACGGCGGC-CAGCAAGGGCCTGTTCTTCCTGGGGCCGGTGATGGCCATCATGCCGGCCCTGGCCGCCTGGGCGGCCATCCCCTTCGGCCCCGACGTCGTGCTGGCGAACGTGAATGCCGGGCTGCTGCTCATCATTGCCATCGCCTCGATCGAGGTCTATGGCGTCATCATCGCGGGCTGGGCGTCCAACTCCAAGTACGCCTTCCTGGGCGCACTGCGTGCCTCGGCGCAGATGGTGAGCTATGAAATCGCCATGG
|
|
586
|
+
i xenTro2.scaffold_8452 n 0 I 124
|
|
587
|
+
s tetNig1.chrUn_random 103512702 346 + 171761319 CAACTACGAAAAGGTCCAAACATCGTAGGCCCTTATGGCCTTCTCCAACCAATTGCAGACGGGGTAAAACTATTTATTAAAGAGCCCGTACGACCCTCAACCTC-CTCCCCAATCCTATTCATCCTCACCCCCATACTAGCCCTCACATTAGCCATAACACTATGAGCCCCCCTACCCCT---TCCATACCCA---GTCCTAGACCTAAACCTAGCCATCCTTTTCATTCTCGCCCTCTCTAGTCTCGCAGTGTATTCAATCCTCGGTTCCGGTTGAGCCTCAAACTCAAAATATGCCTTAGTAGGAGCCCTACGAGCCGTCGCACAAACCATCTCCTATGAAGTAAGCCTAG
|
|
588
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
589
|
+
s danRer4.chrM 3913 346 + 16596 CAACTCCGAAAAGGACCAAATGTAATAGGCCCCCGAGGACTGTTACAATCAGTAGCTGATGGCGTGAAACTTTTTATTAAAGAACCCATTCGACCATCTATGGC-TTCTCCAATTTTATTTTTAACAGCTCCAGTTCTTGCACTAATCCTAGCAATAATGCTATGGGCACCCATACCCAT---GCCCTATCCA---GTACTCGACCTAAATCTTGGAATTTTATTTATTATAGCCATCTCAAGCCTAGCAGTATACTCAATCCTGGGATCAGGTTGAGCATCAAACTCAAAATACGCATTAATTGGGGCCTTACGAGCTGTAGCGCAAACAATTTCATATGAAGTTAGCCTAG
|
|
590
|
+
i danRer4.chrM C 0 C 0
|
|
591
|
+
|
|
592
|
+
a score=274539.000000
|
|
593
|
+
s mm8.chrM 3189 85 + 16299 CTATTATCCTTTTATCAGTTCTATTAATAAATGGATCCTACTCTCTACAAACACTTATTACAACCCAAGAACACATATGATTACT
|
|
594
|
+
s galGal2.chrM 4509 85 + 16775 CCATCATCCTGTTATCCACAATCATACTGAGCGGCAATTACACCTTAAGCACCCTGGCCATCACCCAAGAGCCCATCTACCTCAT
|
|
595
|
+
i galGal2.chrM C 0 C 0
|
|
596
|
+
s monDom4.chrUn 117154614 85 + 174229318 CAATTATTCTGCTTTCAATTATACTAATTAATGGCTCCTTTACCCTAAAAAATTTAATAATTACCCAAGAAAATATATGATTAAT
|
|
597
|
+
i monDom4.chrUn C 0 C 0
|
|
598
|
+
s echTel1.scaffold_181343 2580 85 + 18297 CTATTATTCTGCTATCAGTAATATTATTTAATGGTTCATTCTCTTTGTCCTCCCTCACTATTACTCAAGAACATTTATGACTGCT
|
|
599
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
600
|
+
s loxAfr1.scaffold_36650 6186 85 + 16266 CAACTATCACCTTATCAATAGTACTAATAAATGGGTCCTTCACACTAACCGCCTTCGCTATAACACAAGAACATCTATGACTAAT
|
|
601
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
602
|
+
s dasNov1.scaffold_23239 7003 85 - 16977 CCATCATCTTACTATCAATCATAATAACAAATGGCTCATTCACCCTATCTACCCTAACAACAACACAAGAACACATATGACTAAT
|
|
603
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
604
|
+
s canFam2.chrM 3185 85 + 16727 CAATTATTCTTCTATCAGTCCTCCTAATAAACGGGTCATTTACACTATCCACGCTAATTATTACCCAAGAACATATATGATTAAT
|
|
605
|
+
i canFam2.chrM C 0 C 0
|
|
606
|
+
s bosTau2.chrM 3539 85 + 16338 CAATTATCCTGTTATCAGTACTCCTAATAAGTGGGTCCTTTACCCTCTCCACATTAATTACTACACAAGAACAAATATGGTTAAT
|
|
607
|
+
i bosTau2.chrM C 0 C 0
|
|
608
|
+
s rheMac2.chr5 34439204 85 - 182086969 CCATTATCCTGCTATCAGTTCTACTGATAAGCCGCTCGTTTAACTTATACAAACTCTTCACCATGCAAGAATTCCTCTGACTGCT
|
|
609
|
+
i rheMac2.chr5 C 0 C 0
|
|
610
|
+
s hg18.chrM 3746 85 + 16571 CCATCATTCTACTATCAACATTACTAATAAGTGGCTCCTTTAACCTCTCCACCCTTATCACAACACAAGAACACCTCTGATTACT
|
|
611
|
+
i hg18.chrM C 0 C 0
|
|
612
|
+
s panTro2.chrM 3163 85 + 16554 CCATTATCCTACTGTCAACGCTACTAATAAGTGGCTCCTTCAATCTCTCTACCCTTGTCACAACACAAGAGCACCTCTGACTAAT
|
|
613
|
+
i panTro2.chrM C 0 C 0
|
|
614
|
+
s oryCun1.scaffold_205008 817 85 - 118789 CAATTATCCTCCTATGCATCCTCCTAATAAATGGCTCATTTACATTATCATCCCTAATCACAACACAAGAATATATATGAATCCT
|
|
615
|
+
i oryCun1.scaffold_205008 C 0 C 0
|
|
616
|
+
s rn4.chrM 3167 85 + 16300 CCTTATACCTCTTATCCGTCCTCCTAATAAGCGGCTCCTTCTCCCTACAAATACTTATCACTACACAAGAACATATCTGACTATT
|
|
617
|
+
i rn4.chrM C 0 C 0
|
|
618
|
+
s tetNig1.chrUn_random 103513048 85 + 171761319 GCCTAATCCTACTCTCCCTAATTATCTTCACTGGGGGCTTCACACTACAAACCTTCAACACCGCCCAAGAAAGTATTTGACTTAT
|
|
619
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
620
|
+
s danRer4.chrM 4259 85 + 16596 GACTTATTCTATTATCTGCCGTTATTTTTTCTGGGGGATACACCCTACAAACATTTAATACAACTCAGGAAGACACATGACTTCT
|
|
621
|
+
i danRer4.chrM C 0 C 0
|
|
622
|
+
e xenTro2.scaffold_8452 11626 124 + 23823 I
|
|
623
|
+
|
|
624
|
+
a score=377866.000000
|
|
625
|
+
s mm8.chrM 3274 64 + 16299 TCTGCCAGCCTGACCCATAGCCATAATATGATTTATCTCAACCCTAGCAGAAACAAACCGGGCC
|
|
626
|
+
s rn4.chrM 3252 64 + 16300 AATCCCCGCCTGACCAATAGCCATAATATGATACATTTCAACCCTCGCAGAAACAAATCGAGCT
|
|
627
|
+
i rn4.chrM C 0 C 0
|
|
628
|
+
s oryCun1.scaffold_205008 902 64 - 118789 ACTACCAGCATGACCACTTGCCATAATATGATTTATCTCAACCCTAGCAGAAACCAACCGGGCT
|
|
629
|
+
i oryCun1.scaffold_205008 C 0 I 2359
|
|
630
|
+
s panTro2.chrM 3248 64 + 16554 CCTGCCAACATGACCCCTGGCCATAATATGATTTATCTCTACACTAGCAGAGACCAACCGAACT
|
|
631
|
+
i panTro2.chrM C 0 C 0
|
|
632
|
+
s hg18.chrM 3831 64 + 16571 CCTGCCATCATGACCCTTGGCCATAATATGATTTATCTCCACACTAGCAGAGACCAACCGAACC
|
|
633
|
+
i hg18.chrM C 0 C 0
|
|
634
|
+
s rheMac2.chr5 34439289 63 - 182086969 CCTACCATCATGGCCC-TAGCCATAACATGATTCATCTCCACACTAGCAGAAACTAACCGAGCC
|
|
635
|
+
i rheMac2.chr5 C 0 C 0
|
|
636
|
+
s bosTau2.chrM 3624 64 + 16338 CCTCCCAGCATGGCCTCTAGCAATAATATGATTTATCTCAACACTAGCAGAAACAAACCGAGCT
|
|
637
|
+
i bosTau2.chrM C 0 C 0
|
|
638
|
+
s canFam2.chrM 3270 64 + 16727 CTTTCCGGCCTGACCCCTAGCCATGATATGATTCATCTCTACCCTAGCAGAAACTAATCGAGCC
|
|
639
|
+
i canFam2.chrM C 0 C 0
|
|
640
|
+
s dasNov1.scaffold_23239 7088 64 - 16977 CTTTCCCCTCTGGCCACTAGCAATAATATGATTTATCTCCACACTAGCAGAAACCAATCGCGCC
|
|
641
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
642
|
+
s loxAfr1.scaffold_36650 6271 64 + 16266 CCTTCCTATATGACCCCTGATAATAATATGATTCACATCAACCTTAGCAGAAACTAACCGAGCC
|
|
643
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
644
|
+
s echTel1.scaffold_181343 2665 64 + 18297 AGTCCCCTCATGACCCCTAGCAATAATATGATTCATCTCAACACTAGCAGAAACTAACCGGGCC
|
|
645
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
646
|
+
s monDom4.chrUn 117154699 64 + 174229318 TATAACCGCATGACCTCTAACTATAATATGGTATATTTCTACATTAGCCGAGACAAACCGAGCT
|
|
647
|
+
i monDom4.chrUn C 0 C 0
|
|
648
|
+
s galGal2.chrM 4594 64 + 16775 TTTTTCCGCATGACCCCTCGCAATAATATGATACATCTCTACCCTTGCTGAAACCAACCGCGCC
|
|
649
|
+
i galGal2.chrM C 0 C 0
|
|
650
|
+
s xenTro2.scaffold_8452 11750 64 + 23823 GCTGCCGCTGCTGCCCATCTTCGTGGTCTACCTGATTTCCAGCGTGGCCGAAACCAACCGCCAC
|
|
651
|
+
i xenTro2.scaffold_8452 I 124 C 0
|
|
652
|
+
s tetNig1.chrUn_random 103513133 64 + 171761319 CATCCCAACCTGACCCCTTGCCGCAATATGATACATCTCCACCCTAGCAGAAACCAACCGAGCC
|
|
653
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
654
|
+
s danRer4.chrM 4344 64 + 16596 ACTTCCACTATGACCATTAGCCATTATATGATTTATCTCAACGCTGGCAGAAACAAACCGAGCA
|
|
655
|
+
i danRer4.chrM C 0 C 0
|
|
656
|
+
|
|
657
|
+
a score=1445299.000000
|
|
658
|
+
s mm8.chrM 3338 294 + 16299 CCCTTCGACCTGACAGAAGGAGAATCAGAATTAGTATCAGGGTTTAACGTAGAATACGCAGCCGGCCCATTCGCGTTATTCTTTATAGCAGAGTACACTAACATTATTCTAATAAACGCCCTAACAACTATTATCTTCCTAGGACCCCTATA--CTATATCAATTTACCAGAACTCTACTCA-------ACTAACTTCATAATAGAAGCTCTACTACTATCATCAACATTCCTATGGATCCGAGCATCTTATCCACGCTTCCGTTACGATCAACTTATACATCTTCTATGAAAAAACTTTCTA
|
|
659
|
+
s rn4.chrM 3316 294 + 16300 CCCTTCGACTTAACAGAAGGAGAATCAGAATTAGTCTCAGGCTTTAACGTCGAATACGCCGCAGGACCATTCGCCCTATTCTTCATAGCCGAGTACACCAACATTATTCTAATAAACGCCCTAACATCAATTGTATTCCTAGGCCCCTTATA--TCATATCAATTACCCTGAATTATACTCA-------ACCAGCTTCATAACAGAAACACTACTTCTATCCACAACTTTCCTATGGATTCGAGCATCCTACCCCCGTTTTCGATATGACCAACTAATGCACCTCCTATGAAAAAATTTCCTC
|
|
660
|
+
i rn4.chrM C 0 C 0
|
|
661
|
+
s oryCun1.scaffold_140182 3485 294 + 20791 CTCATTGACTTAACCGAAGGTGAATCAGAGCTCGTCTCCGGCTTCAATGTGGAGTACGCAGGAGGCCCCTTTGCTCTTTTCTTTTTAGCTGAATATACTAATATTATCCTTATAAATGCCCTTACAGCCATCCTATTCCTAGGCTCATTTCA--CAGCCACACTAACCCAGAAATATTTACA-------GTCAACTTTGCCACAAAGACTCTCCTACTCACAATAACATTTCTATGGATTCGAGCATCCTATCCCCGATTTCGCTATGACCAGCTAATACACCTCTTGTGAAAAAGTTTTCTA
|
|
662
|
+
i oryCun1.scaffold_140182 M 1789 C 0
|
|
663
|
+
s panTro2.chrM 3312 294 + 16554 CCCTTCGACCTTACTGAAGGAGAATCTGAACTAGTCTCAGGCTTTAATATCGAGTATGCCGCAGGCCCCTTTGCCCTATTTTTCATAGCCGAATACATAAACATTATTATAATAAACACCCTCACTGCTACAATCTTCCTAGGAGCAACATA--CAATACTCACTCCCCTGAACTCTACACG-------ACATATTTTGTCACCAAAGCTCTACTTCTAACCTCCCTGTTCCTATGAATTCGAACAGCATATCCCCGATTTCGCTACGACCAGCTCATACACCTCCTATGAAAAAACTTCCTA
|
|
664
|
+
i panTro2.chrM C 0 C 0
|
|
665
|
+
s hg18.chrM 3895 294 + 16571 CCCTTCGACCTTGCCGAAGGGGAGTCCGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATTATAATAAACACCCTCACCACTACAATCTTCCTAGGAACAACATA--TGACGCACTCTCCCCTGAACTCTACACA-------ACATATTTTGTCACCAAGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACCCCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTA
|
|
666
|
+
i hg18.chrM C 0 C 0
|
|
667
|
+
s rheMac2.chr5 34439352 294 - 182086969 CCTTTTGATCTATCAGAAGGAGAGTCAGAGTTAGTCTCAGGCTTCAACATCGAATACGCCACAGGCTCATTTGTCCTCTTCTTTATAGCAGAATATATGAATATTATCATAATAAATGCCCTAACTACTGCTATTTTCATAGGAGTACTACA--CACTATATACTCACCAGAATTCTATACT-------ACAAATTTCATTACCAAGACCCTTCTTTTAACCACTCTATTTTTATGAATTTGAATGGCATACCCTCAATTCCACTGTGACCAACTCATACATCTTTTATGAAAAAACTTCCTA
|
|
668
|
+
i rheMac2.chr5 C 0 C 0
|
|
669
|
+
s bosTau2.chrM 3688 294 + 16338 CCATTTGATTTAACTGAAGGAGAATCAGAGCTAGTCTCGGGCTTCAACGTAGAATATGCAGCAGGACCATTTGCCCTCTTCTTCATAGCAGAGTACGCAAATATTATCATAATAAATATCTTTACAGCAATTTTATTCCTAGGAACATCCCA--CAATCCACACATACCAGAACTCTACACA-------ATCAATTTTACCATTAAATCCCTACTGCTCACAATATCCTTCCTATGAATCCGAGCATCCTACCCTCGATTTCGCTATGACCAACTAATACACTTACTATGAAAAAATTTTCTA
|
|
670
|
+
i bosTau2.chrM C 0 C 0
|
|
671
|
+
s canFam2.chrM 3334 294 + 16727 CCCTTCGACTTAACTGAAGGAGAATCCGAACTAGTCTCTGGATTTAACGTAGAGTATGCAGCAGGTCCTTTCGCCCTATTCTTTCTAGCAGAGTACGCAAATATTATTATAATAAACATCCTCACAACAATTCTGTTCTTCGGCGCATTCCA--CAACCCATTCATACCAGAACTCTACTCT-------ATTAACTTCACTATAAAAACCCTCTTATTAACCATCTGCTTCCTATGAATTCGAGCATCATACCCTCGATTCCGCTACGATCAGTTAATACACTTATTATGAAAAAATTTTCTA
|
|
672
|
+
i canFam2.chrM C 0 C 0
|
|
673
|
+
s dasNov1.scaffold_23239 7152 294 - 16977 CCATTCGACCTAACAGAAGGTGAATCAGAATTAGTGTCCGGATTCAACGTCGAATATGCAGCAGGGCCATTTGCCCTATTCTTTTTAGCTGAGTATGCCAACATCATTATAATAAATGCACTAACAGCCATTTTATTTTTTGGGGCCATACA--CAACCCAATATTCCCAGAACTACACACC-------CTAAACTTAATCACAAAAACCCTGATTCTTACTATAATATTTCTATGAGTACGCGCATCCTATCCACGATTCCGCTATGACCAACTAATACACCTCCTATGAAAAAGCTTTCTC
|
|
674
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
675
|
+
s loxAfr1.scaffold_36650 6335 294 + 16266 CCATTTGATTTAACCGAAGGAGAATCAGAATTAGTTTCTGGCTTCAATGTCGAATACTCAGCTGGCCCTTTCGCCCTATTTTTTATAGCTGAATACGCTAACATCATCATAATAAACGCTCTTACTGTGATTCTATTTATAGGAACCTCTTA--TGACCCCCAAATACCAGAAATTAGTACC-------ATTAACTTTGTCATAAAAACTATTATCCTAACCATCTGCTTTCTATGAGTACGAGCATCTTACCCACGATTCCGATACGACCAACTAATACATCTCCTCTGAAAAAATTTTCTC
|
|
676
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
677
|
+
s echTel1.scaffold_181343 2729 294 + 18297 CCATTTGACTTAACAGAAGGGGAATCAGAATTAGTTTCAGGCTTTAACGTTGAATATGCAGCAGGGCCCTTCGCTCTATTTTTCCTTGCAGAATACGCTAACATCATTATAATGAATGCTCTAACCACTATTCTATTTATAGGAGCATTTCA--TAATATATCTGTTACAGAAATTTACACG-------TTAAATTTTATTACAAAAACACTACTTCTCACTATACTATTTTTATGAGTTCGAGCATCATACCCTCGATTTCGATATGATCAACTAATACATTTATTATGAAAAAACTTCTTA
|
|
678
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
679
|
+
s monDom4.chrUn 117154763 294 + 174229318 CCTTTTGACCTGACAGAAGGAGAGTCGGAATTAGTCTCAGGTTTTAATGTGGAATATGCCGCTGGACCCTTCGCTATATTCTTTTTAGCAGAGTACGCCAACATTATAGCAATAAATGCCATAACAACAATTCTCTTCCTGGGGCCCCCCCT--AAACCACAACCACACTTATACCTGCACC-------ATTAGCTTCATATTCAAAACAATATTACTAACATCAGCCTTCCTATGAGTACGAGCATCATACCCTCGCTTTCGATATGATCAATTAATGTACTTATTATGAAAAAGCTTCCTC
|
|
680
|
+
i monDom4.chrUn C 0 C 0
|
|
681
|
+
s galGal2.chrM 4658 294 + 16775 CCATTTGACCTAACAGAAGGAGAGTCAGAGCTAGTCTCAGGATTTAATGTAGAATATGCCGCCGGACCATTCGCCATATTCTTCTTAGCCGAATACGCCAACATTATACTAATAAACACACTAACCACCGTCCTATTCCTGAACCCAAGCTT--CCTAAATCTCCCACCAGAATTATTTCCC-------ATTGCACTCGCTACAAAAACCCTCCTCCTTTCATCCTCATTTCTATGAATCCGGGCCTCATATCCACGGTTCCGCTATGACCAACTAATACATCTTCTATGAAAAAACTTCCTC
|
|
682
|
+
i galGal2.chrM C 0 C 0
|
|
683
|
+
s xenTro2.scaffold_8452 11814 303 + 23823 CCGTTCGACGTGGTCGAAGGCGAGGCCGAGATCGTGGCTGGTCATATGGTCGAGTATTCGGGCATGGGCTTCGCCATCTTCTTCCTGGCTGAATACGCCGCGATGTGGCTGGTTTCCATCCTGGCCGTGCTGATGTTCCTGGGCGGCTGGCTGCCACCGTTCGCGGCCCTGTCCTTCATCCCGGGCTGGATCTGGCTGGCGGCCAAGACCTTCCTGGTGGTCTCCATGTTCATCTGGATCCGTGCCACCTTCCCGCGCTACCGCTATGACCAGATCATGCGCCTGGGCTGGAAGATCTTCATC
|
|
684
|
+
i xenTro2.scaffold_8452 C 0 I 1675
|
|
685
|
+
s tetNig1.chrUn_random 103513197 294 + 171761319 CCATTTGATCTAACTGAAGGCGAGTCAGAACTAGTTTCTGGTTTTAACGTAGAATACGCAGGAGGCCCTTTCGCCCTATTCTTCCTCGCAGAATACGCCAACATCCTATTTATAAACACCCTTTCCGCCAGCCTCTTCCTAGGAGCCTCCCA--TATCCCAATACTTCCAGAACTGACCACA-------ATAAACCTAATAACCAAAGCAGCCGTCCTCTCACTCGTCTTCCTATGGGTACGAGCCTCCTACCCACGATTTCGCTATGACCAACTAATACACCTTATCTGAAAAAACTTCTTA
|
|
686
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
687
|
+
s danRer4.chrM 4408 294 + 16596 CCGTTCGATCTTACAGAGGGGGAATCAGAACTAGTCTCAGGCTTCAATGTAGAGTATGCAGCAGGACCATTTGCCTTATTCTTTTTGGCTGAGTACTCAAATATTTTACTAATAAACACCCACTCAACAGTACTATTTTTAGGAGCATCGTT--TACCCCAGATGCACCTGAGCTAATAACA-------ATCAGTATTGCAACCAAAACTGCAATACTATCTATTTTGTTTCTCTGAATACGAGCATCATACCCACGATTCCGATACGACCAACTTATGCATCTTATCTGGAAAAACTTTCTT
|
|
688
|
+
i danRer4.chrM C 0 C 0
|
|
689
|
+
|
|
690
|
+
a score=692934.000000
|
|
691
|
+
s mm8.chrM 3632 140 + 16299 CCCCTAACACTAGCATTATGTATGTGACATATTTCTTTACCAATTTTTACAGCGGGAGTACCACCATACATATA------GAAATATGTCTGA--T---AA--AAGAATTACTTTGATAGAGTAAATTATAGAGG-TTCA--AGCCCTCTTAT-TTc-
|
|
692
|
+
s rn4.chrM 3610 140 + 16300 CCACTAACACTAGCATTCTGCATATGATACATTTCCCTGCCAATTTTCCTAGCAGGAATTCCACCCTACACATA------GAAATATGTCTGA--C---AA--AAGAGTTACTTTGATAGAGTAAATAATAGAGG-TTTA--AATCCTCTTAT-TTc-
|
|
693
|
+
i rn4.chrM C 0 I 71
|
|
694
|
+
s oryCun1.scaffold_140182 3779 141 + 20791 CCCCTCACATTAGCCCTGTGCATATGACATATCTCAATACCTATCATACTTTCAAGTATCCCTCCTCAGATATA------GAAATATGTCTGA--T---AA--AAGAGTTACTTTGATAGAGTAAATAATAGAGGATCTT--AGCCCTCTTAT-TTc-
|
|
695
|
+
i oryCun1.scaffold_140182 C 0 I 77
|
|
696
|
+
s panTro2.chrM 3606 141 + 16554 CCACTCACCCTAGCATCACTCATGTGATATATCTCCATACCCACTACAATCTCCAGCATCCCCCCTCAAACCTAA-----GAAATATGTCTGA--T---AA--AAGAATTACTTTGATAGAGTAAATAATAGGAG-TTCA--AATCCCCTTAT-TTc-
|
|
697
|
+
i panTro2.chrM C 0 I 70
|
|
698
|
+
s hg18.chrM 4189 141 + 16571 CCACTCACCCTAGCATTACTTATATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAA-----GAAATATGTCTGA--T---AA--AAGAGTTACTTTGATAGAGTAAATAATAGGAG-CTTA--AACCCCCTTAT-TTc-
|
|
699
|
+
i hg18.chrM C 0 I 70
|
|
700
|
+
s rheMac2.chr5 34439646 136 - 182086969 CCACTTACACTAGCATTTTGC-----ATATATCTCAATGCTTGTCCTAATTTCCACCATCCCACCCTAAACATAG-----GCAATATGTCAGA--C---AA--AAGAATTACTTTGATAGAGTAAACAATAGAGA-TTAA--AATCCTCTGAT-TTc-
|
|
701
|
+
i rheMac2.chr5 C 0 I 71
|
|
702
|
+
s bosTau2.chrM 3982 141 + 16338 CCTCTGACACTAGCCCTGTGCATGTGACACGTATCCCTACCCATCCTTACATCAGGCATCCCACCACAAACATAA-----GAAATATGTCTGA--C---AA--AAGAGTTACTTTGATAGAGTAAATAATAGAGG-TTCA--AACCCTCTTAT-TTc-
|
|
703
|
+
i bosTau2.chrM C 0 I 71
|
|
704
|
+
s canFam2.chrM 3628 141 + 16727 CCCTTAACTTTAGCCCTATGCATATGACATGTTGCCTTACCCATTATCACCGCAAGTATCCCACCCCAAACATAA-----GAAATATGTCTGA--T---AA--AAGAGTTACTTTGATAGAGTAAATAATAGAGG-TTTA--AATCCTCTTAT-TTc-
|
|
705
|
+
i canFam2.chrM C 0 I 72
|
|
706
|
+
s dasNov1.scaffold_23239 7446 140 - 16977 CCACTTACATTAGCATTATGTATACTCCACGTATCAGCCCCAGCAACATTCGCAGGCGTACCCCCACACATATA------GGAATATGTCTGA--T---AA--AAGAATTACTTTGATAGAGTAAATAATAGAGG-TTTG--AACCCTCTTAT-TCc-
|
|
707
|
+
i dasNov1.scaffold_23239 C 0 I 72
|
|
708
|
+
s loxAfr1.scaffold_36650 6629 140 + 16266 CCACTAACTCTAGCTCTATGCATATGACACATCTCAGTCCTAATCTCACTAGCATGTATTCCACCACAAGCATA------GAAATATGTCTGA--C---AA--AAGAATTACTTTGATAGAGTAAATTATAGAGG-TCTG--AACCCTCTTAT-TTc-
|
|
709
|
+
i loxAfr1.scaffold_36650 C 0 I 71
|
|
710
|
+
s echTel1.scaffold_181343 3023 140 + 18297 CCAATAACCTTAGCCCTATGCATATGATACATCTCCATTCCTGTCATATTAGCTAGTATTCCCCCTCAAATATA------GAAACATGTCTGA--T---AA--AAGAGTTACTTTGATGGAGTAAATAATAGAGG-TTTA--AATCCCCTTGT-TTc-
|
|
711
|
+
i echTel1.scaffold_181343 C 0 I 67
|
|
712
|
+
s monDom4.chrUn 117155057 141 + 174229318 CCAATTACCCTAGCACTATGTCTAATATTTATCTCTATTCCAATTGCACTATCAAGTATCCCACCACAAATATAA-----GAAATATGTCTGA--C---AA--AAGAATTATCTTGATAGGATAAATAATAGGGG-TTCA--AACCCCCTTAT-TTc-
|
|
713
|
+
i monDom4.chrUn C 0 I 70
|
|
714
|
+
s galGal2.chrM 4952 142 + 16775 CCCCTAACCCTAGCCTTATGCCTCTGACATACCAGCATACCAATCAGCTACGCCGGCCTCCCCCC---AATCTAAG----GAAGCGTGCCTGAACA---AA--AAGGATCACTATGATAAAGTGAAC-ATAGAGG-TATAACAACCCTCTCAC-TTC-
|
|
715
|
+
i galGal2.chrM C 0 I 75
|
|
716
|
+
s xenTro2.scaffold_18215 2547 143 + 3330 CCAATCACACTAGCAATAACACTATGACACATCTCCTTACCAATCTCTCTATCAGGCCTACCACCTCAGATATAG-----GAAACGTGCCCGA--A---AGTTAGGGATCACTNTGATAGAGTGAAACATAGGGG-TTCA--AACCCCCTCGT-CTC-
|
|
717
|
+
i xenTro2.scaffold_18215 M 690 I 2
|
|
718
|
+
s tetNig1.chrUn_random 103513491 148 + 171761319 CCCCTAACATTAGCACTTGTTATCTGACACCTGGCACTCCCAATCACATTTGCAGGCCTCCCGCCTCAAATATAGC-CAGGAGCTGTGCCTGA--AT--TA--AAGGGCCACTTTGATAGAGTGAACCATGGGGG-TTAA--ATTCCCCCCAGCTCCT
|
|
719
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
720
|
+
s danRer4.chrM 4702 150 + 16596 CCAATCACATTAGTTCTAGTACTATGACATATCGCCCTACCAATCGCACTAGCTGGTCTACCCCCACAAACATAACTCAAGAACCGTGCCCGA--ATGCTA--AGGGGTCACTTTGATGGAGTGAACCATAGGGG-TTAA--AATCCCCTCGG-TTCT
|
|
721
|
+
i danRer4.chrM C 0 C 0
|
|
722
|
+
|
|
723
|
+
a score=14911.000000
|
|
724
|
+
s mm8.chrM 3772 70 + 16299 taggacaataggaattgaacctacacttaag-----------aattcaaaattctccgtgctacctaaacaccttatccta
|
|
725
|
+
s xenTro2.scaffold_18215 2692 70 + 3330 TAGAAAGACAGGAATTGAACCTGCACCTGAG-----------AGATCAAAACCCTCCGTACTCCCACTATACCACTCTCTA
|
|
726
|
+
i xenTro2.scaffold_18215 I 2 C 0
|
|
727
|
+
s tetNig1.chrUn_random 103513639 70 + 171761319 TAGAAAGAAGGGACTCGAACCCAACCCAGAGAGATCAAAACT-----------CTCAGTGCTTCCACTACACCACTTTCTA
|
|
728
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
729
|
+
s danRer4.chrM 4852 70 + 16596 TAGAAAGAAGGGGGTCGAACCCATGCCCAAG-----------AGATCAAAACTCTTAGTGCTTCCACTACACCACTTTCTA
|
|
730
|
+
i danRer4.chrM C 0 C 0
|
|
731
|
+
e monDom4.chrUn 117155198 70 + 174229318 I
|
|
732
|
+
e echTel1.scaffold_181343 3163 67 + 18297 I
|
|
733
|
+
e loxAfr1.scaffold_36650 6769 71 + 16266 I
|
|
734
|
+
e dasNov1.scaffold_23239 7586 72 - 16977 I
|
|
735
|
+
e canFam2.chrM 3769 72 + 16727 I
|
|
736
|
+
e bosTau2.chrM 4123 71 + 16338 I
|
|
737
|
+
e rheMac2.chr5 34439782 71 - 182086969 I
|
|
738
|
+
e panTro2.chrM 3747 70 + 16554 I
|
|
739
|
+
e hg18.chrM 4330 70 + 16571 I
|
|
740
|
+
e rn4.chrM 3750 71 + 16300 I
|
|
741
|
+
e oryCun1.scaffold_140182 3920 77 + 20791 I
|
|
742
|
+
e galGal2.chrM 5094 75 + 16775 I
|
|
743
|
+
|
|
744
|
+
a score=791168.000000
|
|
745
|
+
s mm8.chrM 3842 168 + 16299 ATAG--TAAGGTCAGCT-AA-T-TAAGCTATCGGGCCCATACCCCGAAAACGTTGGTTTAAATCCTTCCCGTACTAATAAATCCTATCACCCTTGCCATCATCTACTTCA--CAATCTTCTTAGGTCCTGTAATCACAATATCCAGCACCAACCTAATACTAATATGAGTAGGCC
|
|
746
|
+
s rn4.chrM 3821 167 + 16300 ATAG--TAAGGTCAGCT-AA-C-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTT-AAACCCTTCCCGTACTAATAAATCCAATTACCCTAACCATTATTTACTTAA--CCACCTTTAAAGGCCGCCTAATCACGACACTTAGCACCAACTTACCACCAATATGAGTAGGAT
|
|
747
|
+
i rn4.chrM I 71 C 0
|
|
748
|
+
s oryCun1.scaffold_140182 3997 168 + 20791 TAAG--TAAGGTCAGCT-AA-A-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATATCCTTCCCGTACTAATTAACCCCCTAACTCTTATTATTATTATATTTA--CTCTATTTATAGGCACGATAATCACAGTATTTAGCTCCCACTGACTAACTATATGAATCGGAT
|
|
749
|
+
i oryCun1.scaffold_140182 I 77 C 0
|
|
750
|
+
s hg18.chrM 4400 167 + 16571 aAAG--TAAGGTCAGCT-AA-A-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTT-ATACCCTTCCCGTACTAATTAATCCCCTGGCCCAACCCGTCATCTACTCTA--CCATCTTTGCAGGCACACTCATCACAGCGCTAAGCTCGCACTGATTTTTTACCTGAGTAGGCC
|
|
751
|
+
i hg18.chrM I 70 C 0
|
|
752
|
+
s panTro2.chrM 3817 167 + 16554 aAAG--TAAGGTCAGCT-AA-A-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTT-ACACCCTTCCCGTACTAATTAATCCCCTAGCCCAACCCATCATCTACTCTA--CCATCCTTACAGGCACGCTCATTACAGCGCTAAGCTCACACTGATTTTTCACCTGAGTAGGCC
|
|
753
|
+
i panTro2.chrM I 70 C 0
|
|
754
|
+
s rheMac2.chr5 34439853 160 - 182086969 -GAT--TAAGGTCAGCT-AA-A-TAAGCTATTGGGCCCATACACCGAAAATGTTGGTT-ATACCCTTCCCGTAC--------CCCTTAGCTCAACTTATTATTTCCCTCAGCCCATTTTCACAGGAACTCATATCACAATGCTATGCTCACACTGATTTCTAATCTGAACAGGGC
|
|
755
|
+
i rheMac2.chr5 I 71 C 0
|
|
756
|
+
s bosTau2.chrM 4194 168 + 16338 TTAG--TAAGGTCAGCT-AA-T-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATATCCTTCCCGTACTAATAAACCCAATTATCTTTATTATTATTCTACTAA--CCATTATACTAGGAACTATTATTGTCATAATCAGTTCTCACTGACTACTTGTCTGAATCGGGT
|
|
757
|
+
i bosTau2.chrM I 71 C 0
|
|
758
|
+
s canFam2.chrM 3841 169 + 16727 aCAG--TAAGGTCAGCTAAA-T-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATACCCTTCCCGTACTAATAAAACCCCCTATTCTCATTATCATCATAGCAA--CTATCATGACAGGAACCATAATCGTCATACTAAGCTCGCACTGATTACTGATCTGAATTGGAT
|
|
759
|
+
i canFam2.chrM I 72 C 0
|
|
760
|
+
s dasNov1.scaffold_23239 7658 166 - 16977 --AG--TAAGGTCAGCT-AA-C-AAAGCTATCGGGCCCATACCCCGAAAATGTAGGCTCATACCCTTCCCGTACTAATAAATCCCttaatttttattattattatattta--CCTTAATCTTAGGAACAGTAATTACCATAATTAGCTCCCATTGATTATTAATCTGGATAGGCC
|
|
761
|
+
i dasNov1.scaffold_23239 I 72 C 0
|
|
762
|
+
s loxAfr1.scaffold_36650 6840 169 + 16266 CTAG--TAAGGTCAGCT-AA-ATTAAGCTATCGGGCCCATACCCCGAAAATGTCGGATCACACCCCTCCCATACTAATAAACCCACTAGCTCTTAGCCTAATCCTAACAA--CACTACTCGCAGGAACACTGATTACCATAATAAGCTCCCATTGATTGACAGCCTGAATGGGAC
|
|
763
|
+
i loxAfr1.scaffold_36650 I 71 C 0
|
|
764
|
+
s echTel1.scaffold_181343 3230 167 + 18297 ctaG--TAAGGTCAGCT-AA-A-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTAT-TCCTTCCCATACTAATTAACCCATTAGCTTCCATTATTATGTCTAGTA--CTCTAATTTCAGGCACTCTAATTACTTTAATCAGCTCTCACTGACTTATAGCATGAATAGGTC
|
|
765
|
+
i echTel1.scaffold_181343 I 67 M 371
|
|
766
|
+
s monDom4.chrUn 117155268 165 + 174229318 ---G--TAAGGTCAGCT-AA-A-TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTGCACCCTTCCCATACTAATGTCCCCCTATGTATTAACCATTGTTTCGCTCA--GCTTATTAACAGGAACTTCAGTAACTCTAATTAGCAACCATTGGTTAACTGCCTGAATAGGCC
|
|
767
|
+
i monDom4.chrUn I 70 C 0
|
|
768
|
+
s galGal2.chrM 5169 168 + 16775 CTAG--TAAGGTCAGCT-AA-C-TAAGCTATCGGGCCCATACCCCGAAAATGATGGTTTAACCCCTTCCCCTACTAATGAACCCCCATGCAAAACTAATCTGCACAGTAA--GCCTCATCATGGGAACCAGCATCACAATCTCCAGCAACCATTGAATCTTAGCCTGAACAGGCT
|
|
769
|
+
i galGal2.chrM I 75 C 0
|
|
770
|
+
s xenTro2.scaffold_18215 2762 165 + 3330 ---G--TAAAGTCAGCT-AA-A-AAAGCTTTTGGGCCCATACCCCAAACATGTTGGTTAAACTCCTTCCTTTACTAATGAACCCTATCGCACTATCAATAATCCTCTCAA--GCCTAGCATTAGGCACTATCCTCACTGTATCAAGCAATCATTGATTCCTAGCCTGAATAGGCC
|
|
771
|
+
i xenTro2.scaffold_18215 C 0 C 0
|
|
772
|
+
s tetNig1.chrUn_random 103513709 166 + 171761319 ---G--TAAAGTCAGCT-AAGT-TAAGCTTTTAGGCCCATACCCTAAAGATGTAGGTTAAAATCCTTCCTTTACTAATGAGCCCTTACATTACAGCCTCCTTGCTATTTG--GCCTACTCCTAGGCACAACAATCACCGCAACCAGCTCCCACTGACTAATTGCCTGAATAGGCC
|
|
773
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
774
|
+
s danRer4.chrM 4922 167 + 16596 ---GGATGAGGTCAGCT-AA-T-TAAGCTACCGGGCCCATACCCCGAACATGATGGTTAAAGTCCCTCCTTCATCAATGAACCCTTATGTCCTTATAATTTTAATATCCA--GCCTAGGTCTAGGAACCACATTAACTTTTTCTAGCTCACACTGAATTTTAGCCTGAATAGGAT
|
|
775
|
+
i danRer4.chrM C 0 C 0
|
|
776
|
+
|
|
777
|
+
a score=1213783.000000
|
|
778
|
+
s mm8.chrM 4010 399 + 16299 TGGAATTCAGCCTACTAGCAATTATCCCCATACTAATCAACAAAAAAAACCCACGATCAACTGAAGCAGCAACAAAATACTTCGTCACACAAGCAACAGCCTCAATAATTATCCTCCTGGCCATCGTACTCAACTATAAACAACTAGGAACATGAAT--ATTTCAACAACAAAC-AAACGGTCTTATCCTTAAC----ATAACATTAATAGCCCTATC------CATAAAACTAGGCCTCGCCCCATTCCACTTCTGATTACCAGAAGTAACTCAAGGGATCCCACTGCACATAGGACTTATTCTTCTTACATGACAAAAAATTGCTCCCCTATCAATTTTAATTCAAATTTACCCGCTACTCAACTCTA--CTATCATTTT----------AATA-CTAGCAATTACTTCTATTTTCATAGGGG
|
|
779
|
+
s rn4.chrM 3988 399 + 16300 TGGAAATAAGCCTTTTAGCTATCATCCCACTTCTAGCCAACAAAAAAAGCCCACGATCAACTGAAGCAGCAACAAAATATTTTCTAACCCAAGCTACAGCCTCAATAATTATCCTACTAGTCATCATCCTCAACTACAAACAATCAGGAATATGAAC--CCTTCAACAACAAAC-CAATAACATACTACTCAAC----ATAATACTCATTTCACTGGC------CATAAAACTTGGACTAGCCCCATTCCACTACTGACTACCCGAAGTCACCCAAGGAATTCCCCTACACATTGGATTAATCTTACTAACATGACAAAAAATTGCTCCACTATCAATTCTATACCAATTTTATCAACTCCTAAACCCAA--CTATCACCAC----------CATT-CTCGCAATTTCATCAGTCTTTGTTGGCG
|
|
780
|
+
i rn4.chrM C 0 C 0
|
|
781
|
+
s oryCun1.scaffold_140182 4165 399 + 20791 TAGAAATAAACATACTAGCAATTATCCCTATTCTAATCAACAAAGCCACCCCACGATCAACAGAAGCTGCAACCAAATATTTTCTAACACAAGCCACAGCATCTATAATCTTAATAATAGCTATTACACTTAATATCCTTGACTCCGGACAATGAAC--CCT-----AATTAAT-CCACAGAATCA-ACTTACT----CCAGTCCTAATTACACTGGCACTAATCATTAAACTAGGAATAGCCCCCTTCCACTTCTGAGTACCAGAGGTCACCCAAGGAGTTCCCCTAAAATCAGGATTAATCCTTCTCACGTGACAAAAATTAGCCCCCCTATCCATCCTTTACCAAATCTCCCCATCAATTAATCCAA--CTATAATAAT----------ATCA-GTAGCCATTCTATCAATTATAGTTGGCG
|
|
782
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
783
|
+
s hg18.chrM 4567 399 + 16571 TAGAAATAAACATGCTAGCTTTTATTCCAGTTCTAACCAAAAAAATAAACCCTCGTTCCACAGAAGCTGCCATCAAGTATTTCCTCACGCAAGCAACCGCATCCATAATCCTTCTAATAGCTATCCTCTTCAACAATATACTCTCCGGACAATGAAC--CAT-----AACCAATACTACCAATCAATACTCATCATTAATAATCATAATGGCTATAGC------AATAAAACTAGGAATAGCCCCCTTTCACTTCTGAGTCCCAGAGGTTACCCAAGGCACCCCTCTGACATCCGGCCTGCTTCTTCTCACATGACAAAAACTAGCCCCCATCTCAATCATATACCAAATCTCTCCCTCACTAAACGTAA--GCCTTCTCCT----------CACT-CTCTCAATCTTATCCATCATAGCAGGCA
|
|
784
|
+
i hg18.chrM C 0 C 0
|
|
785
|
+
s panTro2.chrM 3984 399 + 16554 TAGAAATAAATATACTAGCTTTTATCCCAATCCTAACCAAAAAAATAAGCCCCCGCTCCACAGAAGCCGCCATCAAATACTTTCTCACACAAGCAACTGCGTCCATAATTCTCCTGATAGCTATCCTCTCCAACAGCATACTCTCCGGACAATGAAC--CAT-----AACCAATACTACCAATCAATACTCATCATTAATAATTATAATAGCAATGGC------AATAAAACTAGGAATAGCCCCCTTTCACTTTTGAGTTCCAGAAGTTACCCAAGGCACCCCCCTAATATCCGGCCTACTCCTCCTCACATGACAAAAATTAGCCCCTATTTCAATTATATACCAAATCTCCTCATCACTGAACGTAA--ACCTTCTCCT----------CACC-CTTTCAATCTTGTCCATTATAGCAGGCA
|
|
786
|
+
i panTro2.chrM C 0 C 0
|
|
787
|
+
s rheMac2.chr5 34440013 395 - 182086969 TAGAAATAAACATACTAGCACTTACCCTAATCTTAATTAAAAAAATAAATCCCCGCTCTACAGAAGCAGCCACCAAATATTTCCTTACACAAGCAACCATATCTATAATTCTCATGACAGGTATCCTTTCCAATAACCTGTTCTCCAGACAATGAAA--AAT-----AATAAACACTATCAATCAATTCTTATCCTTAATAATAATAGTGGCCCTAGT------AATAAAACTAGGAATATTCCCCTTTCACTTCTGAGTCTCAGTGATAACCCAAGGAATCTCTTTAATGTCTGGTATACTTCTCCTCACATGACAAAAAGTAGCTCTTATCTCTATTATGTTTCAAAGTTTTTCATCAACAAACAGGA--ACATCCTCCT----------AACA-----CAATCCTATCCATTATAGTGGGTG
|
|
788
|
+
i rheMac2.chr5 C 0 C 0
|
|
789
|
+
s bosTau2.chrM 4362 399 + 16338 TTGAAATAAATATACTCGCCATCATCCCCATCATAATAAAAAATCACAACCCACGAGCTACAGAAGCATCAACTAAATATTTTTTGACTCAATCAACAGCCTCAATACTACTAATAATAGCCGTCATCATTAACCTAATATTCTCAGGCCAATGAAC--CGT-----AATAAAACTATTTAACCCAATAGCCTCAATACTTATAACGATAGCCCTAGC------TATAAAACTAGGAATAGCCCCATTTCACTTCTGAGTCCCAGAAGTAACACAGGGCATCCCCCTATCCTCAGGCCTTATCCTACTGACATGACAAAAACTAGCACCTATATCTGTACTTTACCAAATCTTCCCATCAATTAACCTAA--ACTTAATTCT----------AACC-CTATCAGTTTTATCAATCCTAATTGGAG
|
|
790
|
+
i bosTau2.chrM C 0 C 0
|
|
791
|
+
s canFam2.chrM 4010 399 + 16727 TCGAAATAAACATGCTAGCCATCATCCCTATTCTCATAAAAAAGTACAATCCACGAGCCATAGAGGCCTCTACAAAATATTTTCTTACACAAGCTACAGCCTCAATATTACTAATAATAGGAGTCACTATCAACCTCCTTTACTCCGGCCAATGGGT--AAT-----CTCAAAAATCTCAAACCCCATCGCATCCATCATGATAACCACTGCCCTAAC------AATAAAACTAGGCCTATCTCCATTCCACTTCTGAGTTCCCGAAGTAACACAGGGAATTACGCTCATATCAGGAATAATCCTACTAACATGACAAAAAATCGCACCTATATCCATCCTATATCAAATCTCTCCATCAATTAACACTA--ACCTTCTTAT----------ACTA-ATAGCCCTTACATCCGTTCTAGTAGGAG
|
|
792
|
+
i canFam2.chrM C 0 C 0
|
|
793
|
+
s dasNov1.scaffold_23239 7824 399 - 16977 TAGAAATAAACATATTCTCAATAATCCCCATTATCATAATAAAATCACACCCTCGATCAACAGAAGCCGCCACCAAATATTTCATGACACAAGCAACAGCATCTATACTTCTAATAATAGGCGTAATCATTAACTTATACTACTCAGGACAATGAAC--AAT-----TATAAATTCACTCAACCCAGTTACATCATATATAATAACCATCGCACTTGC------CATAAAACTAGGACTAGCCCCATTCCACTTCTGAGTGCCAGAGGTAACGCAAGGTACCCAACTAACATCAGGAATAATTCTTCTCACATGACAAAAACTAGCCCCAATAACAATCCTCTATCAAATCCACTCATCCCTAAACCTAA--ATCTAATACT----------AACC-CTAGCTATCCTTTCAATCCTAATCGGGG
|
|
794
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
795
|
+
s loxAfr1.scaffold_36650 7009 399 + 16266 TAGAAATGAACATACTTACTATAATTCCCATTCTAATAAAGACAACCAATCCACGATCCACAGAAGCCGCCACAAAGTACTTTATAACCCAAGCCATAGCATCCATAATACTTATAATGGCTTTAACAATTAACCTAATATACTCAGGACAATGATC--AAT-----TACAAAAATAACCAACCCTGTAGCATCAAACATAGCATTAATAGCTTTAAT------AACCAAACTAGGCTCAGCCCCATTCCACTTCTGAGTTCCAGAAGTAACGCAAGGAGTCGAACTTACACCAGGGATGATCTTGTTAACCTGACAAAAATTAGCACCATTATCCCTACTATATCAAATGGCCACCTACACTAACACTA--ACCTAATCTA----------CCTT-TCTGGTCTACTTTCAATCCTAATTGGGG
|
|
796
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
797
|
+
s echTel1.scaffold_49882 4260 392 - 7170 TTGAAATGAATATATTTGCTATTATTCCTATGATCATAAAAAATAACTCCCCCCGAGCAATTGAGGCTGCAATAAAATATTTCCTCATTCAAGCATCCGCCTCCATACTACTACTTATAGCAGCCTCCCTTAATTTTATATACTCAGGTCAATGAAC--GTT-----AACAGAAATAAATGTCTCAATAGCATCCCTAATTATATTAATTGCTATACT------GATAAAATTAGGTATGGCACCATTTCACTTCTGAGTCCCAGAAGTTACTCAAGGTACTGTTTTATTGACCAGCCTCATTATTTTAACTTGACAAAAGCTAGCCCCCCTAGCTATTCTTTTCCAAATCGCCCCCTCAATTAATGTAG--ATATTATTCT----------TACA-ACAGCTATCCTATCAATTCTA-------
|
|
798
|
+
i echTel1.scaffold_49882 I 1469 n 67
|
|
799
|
+
s monDom4.chrUn 117155433 399 + 174229318 TAGAAATTAATACACTGGCCATTATTCCACTAATAACTTACCCCCACCACACACGAAACACAGAATCAGCCATCAAATATTTCATAACTCAAGCTACAGCTTCAATACTCCTCATATTCTCTATTATTTATAATGCATCCTTCACTAACCAATGGAC--CAT-----TAACCACTCACCCAACCAATGAGCCTCCTTACTAATAACCCTAGCCCTAGC------AATAAAACTAGGACTAGCCCCCTTTCACTTTTGAGTGCCAGAAGTTACACAAGGAATCCCACTATTATCTGGTATAATACTCCTAACATGACAAAAAATTGCTCCCATCTCAATCATATACCAAATTTCACCCTCACTTAATATAC--AAGTACTAAT----------AACC-TTAAGCATTTTATCCACACTATTAGGAG
|
|
800
|
+
i monDom4.chrUn C 0 C 0
|
|
801
|
+
s galGal2.chrM 5337 399 + 16775 TAGAGATCAACACCTTAGCCATCATCCCCCTCATCTCCAAGTCACACCACCCCCGAGCGATTGAAGCCACTATCAAATATTTCCTCACCCAATCAACTGCATCAGCCCTAATCCTCTTCTCGAGCATAACCAACGCCTGATCCACCGGACAATGAGA--CAT-----TACACAACTAAACCACCCGACATCATGCCTAATATTAACAATAGCAATCGC------AATCAAATTAGGACTAGTCCCATTCCACTTCTGATTCCCAGAAGTACTCCAAGGCTCCTCCCTAATCACTGCCCTACTACTCTCCACCCTAATAAAACTCCCCCCAATCACACTCCTCCTCCTAACATCACAGTCTCTTAATACCA--CCTTACTCAC----------CCTC-CTAGCAATCTCCTCCACCCTAATCGGAG
|
|
802
|
+
i galGal2.chrM C 0 C 0
|
|
803
|
+
s xenTro2.scaffold_18215 2927 399 + 3330 TAGAAATCAATACCCTAGCTATCATCCCACTGATAGCCCAAAACCACCACCCACGAGCAGTTGAAGCCTCAACCAAATACTTTCTAACTCAAGCTGCAGCCTCAGCTCTTCTCTTATTCTCAGCTTTAAATAATGCTTGGTTCACTGGAGAATGGTC--AAT-----TATAAACTTGACCAACTCAATCTCATGCACCACCATAACCATCGCCATCTG------CATGAAACTCGGACTAGCACCATTCCACTTCTGACTCCCAGAGGTCCTCCAAGGACTTAATTTAACAACAGGTCTTATCCTATCTACCTGACAAAAACTTGCCCCAATGGCCATCCTCTACCAGATCTCTCCATCAATAAACACCT--CCCTTCTTCT----------TTTA-ATTGGACTAACCTCAACATTAATCGGGG
|
|
804
|
+
i xenTro2.scaffold_18215 C 0 n 0
|
|
805
|
+
s tetNig1.chrUn_random 103513875 396 + 171761319 TAGAAATCAACACCCTCGCCATTATTCCCCTGATAGCCCAACACCACCACCCACGAGCAGTAGAGGCCACAACCAAATATTTCCTCACACAAGCCACCGCAGCAGCCATACTCCTATTCGCAAGCACAACCAACGCATGACTGACCGGACAGTGAGAACTGC-----AACAA--ATAACACACCCCCTTCCCTCCACATTAATTATTCTTGCCCTGGC------CCTAAAAATTGGACTAGCCCCACTACACACTTGACTCCCAGAAGTCCTCCAAGGATTAGACCTAACAACCGGACTCGTCCTCTCCACATGACAAAAGCTCGCACCCTTTGCCCTCCTCCTCCAACT---TCAACCAAACAACCCAA--CACTGCTCGT----------CATC-CTAGGAGTGCTATCAACACTAATCGGAG
|
|
806
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
807
|
+
s danRer4.chrM 5089 399 + 16596 TAGAAATTAATACTTTAGCAATTGTCCCTCTAATAGCACAACAACACCACCCACGGGCAGTAGAAGCCACCACAAAATACTTCCTTATTCAAGCTGCTGCCGCAGCAATAATTCTATTCACAAGTACAACAAATGCCTGAATTTCAGGACAATGGGA--TGT-----TACAGGTATACCAGGCCCAGCCACCAGTACAGCAATAATGTTTGCATTGGC------TCTCAAAATCGGTCTAGCACCAATACATTTTTGATTACCAGAAGTTCTTCAAGGATTAGATCTGTTGACAGGACTAATTTTGTCAACCTGACAAAAACTTGCCCCAATAGCATT--------AA-----TTATCCAAACGACCCAAACCACTGACCCTCTTATTCTTACATCACTAGGAATTGCTTCCTCTCTCATTGGAG
|
|
808
|
+
i danRer4.chrM C 0 C 0
|
|
809
|
+
|
|
810
|
+
a score=552799.000000
|
|
811
|
+
s mm8.chrM 4409 135 + 16299 CATGAGGAGGACTTAACCAAACACAAATACGAAAAATTATAGCCTATTCATCAATTGCCCACATAGGATGAATATTAGCAATTCTTCCTTACAACCCATCCCTCACTCTACTCAACCTCATAATCTATATTATTC
|
|
812
|
+
s galGal2.chrM 5736 135 + 16775 GCTGAATGGGCCTAAACCAAACACAAACACGAAAAATCCTAGCCTTCTCATCCATCTCCCATTTAGGATGAATAATTATAATTATCTCCTATAACCCACAACTCACTATTCTCACCTTCATCCTCTACACAATTA
|
|
813
|
+
i galGal2.chrM C 0 C 0
|
|
814
|
+
s monDom4.chrUn 117155832 135 + 174229318 GATGAGGAGGACTAAACCAAACACACCTACGAAAAATACTAGCATACTCATCAATCGCTCACATAGGGTGAATAACAATTATTATCATTATTTACCCTACACTCACTATACTAAATTTACTAATTTATTTTACTA
|
|
815
|
+
i monDom4.chrUn C 0 C 0
|
|
816
|
+
s echTel1.scaffold_181343 3775 135 + 18297 GCTGGGGCGGCCTAAACCAAACCCAACTACGAAAAATTATAGCGTACTCGTCAATTGCTCACATGGGCTGAATAGCTGCCGTAATAATTTATAATCCCACCCTAATATTACTTAACCTATTATTATACTTAATCT
|
|
817
|
+
i echTel1.scaffold_181343 M 371 C 0
|
|
818
|
+
s loxAfr1.scaffold_36650 7408 135 + 16266 GATGAGGAGGCCTAAATCAAACACAACTACGAAAAATCTTAGCCTATTCATCAATCTCCCATATAGGCTGAATACTCATTATCTTGCCCTTCAATCCCACCCTTACCCTACTAAACTTAACCATTTACATTATAC
|
|
819
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
820
|
+
s dasNov1.scaffold_23239 8223 135 - 16977 GATGAGGAGGACTAAACCAAACACAACTACGAAAAATTATAGCGTATTCATCCATTGCACACATAGGATGAATAACAGCAATCATTATATACAATACATCATTAATGATACTAAACCTAGTGATCTACCTAATAA
|
|
821
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
822
|
+
s canFam2.chrM 4409 135 + 16727 GCTGAGGCGGACTAAATCAAACTCAACTACGAAAAATCATAGCATACTCCTCCATTGCCCACATAGGCTGAATAGCCGCTATCATTACTTATAACCCTACAATAATAGTTCTAAACTTAACTTTATATATTCTAA
|
|
823
|
+
i canFam2.chrM C 0 C 0
|
|
824
|
+
s bosTau2.chrM 4761 135 + 16338 GCTGAGGGGGACTAAACCAAACACAACTCCGAAAAATCATAGCCTACTCATCAATCGCTCATATAGGCTGAATAACAGCAGTACTACCATATAACCCCACCATAACATTGCTAAACTTAATTATCTATATCATTA
|
|
825
|
+
i bosTau2.chrM C 0 C 0
|
|
826
|
+
s rheMac2.chr5 34440408 87 - 182086969 GTTGAGGGGAACTTAACCAAA--CAACTGCGTCAAATCCTAGCCCACTCCTC----------------------------------------------AACATTACCACCCTAAACCTGATTATTTACCTTATCT
|
|
827
|
+
i rheMac2.chr5 C 0 C 0
|
|
828
|
+
s panTro2.chrM 4383 135 + 16554 GCTGAGGCGGACTAAACCAAACCCAACTACGCAAAATCCTAGCATACTCCTCAATCACCCACATAGGCTGAATAATAGCAGTCCTACCATATAACCCTAACATAACCATTCTTAATTTAACCATTTACATCATCC
|
|
829
|
+
i panTro2.chrM C 0 C 0
|
|
830
|
+
s hg18.chrM 4966 135 + 16571 GTTGAGGTGGATTAAACCAAACCCAGCTACGCAAAATCTTAGCATACTCCTCAATTACCCACATAGGATGAATAATAGCAGTTCTACCGTACAACCCTAACATAACCATTCTTAATTTAACTATTTATATTATCC
|
|
831
|
+
i hg18.chrM C 0 C 0
|
|
832
|
+
s oryCun1.scaffold_140182 4564 135 + 20791 GTTGAGGTGGACTAAACCAAACCCAACTACGAAAAATCCTAGCATACTCTTCAATCGCCCACATAGGATGAATAGCAGCTATCATCACATTTAACCCAAATACTATAGTCCTAAACCTAATTATCTATATTCTCA
|
|
833
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
834
|
+
s rn4.chrM 4387 135 + 16300 CCTGAGGAGGACTTAACCAGACCCAAACACGAAAAATCATAGCATACTCATCAATTGCCCACATAGGATGAATAACAGCAATCCTTCCATACAACCCTAACTTAACCCTCCTAAACTTAACAATTTACATCCTAC
|
|
835
|
+
i rn4.chrM C 0 C 0
|
|
836
|
+
s tetNig1.chrUn_random 103514271 135 + 171761319 GCTGAGGAGGCCTAAACCAAACCCAGCTACGAAAAATCCTGGCATACTCATCCATCGCCCACCTAGGTTGAATAATCTTAATTCTGCAATTTTCACCAACCCTCACCCTCCTCACACTTATATTATACCTAATCA
|
|
837
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
838
|
+
s danRer4.chrM 5488 135 + 16596 GGTGAAGCGGACTTAACCAAACCCAACTCCGAAAAATTCTAGCTTATTCATCAATTGCCCACATAGGGTGAATAATTATTGTTATCCAGTACGCTCCGCAACTTACTCTGATTGCTTTAGGAACATATATCTTTA
|
|
839
|
+
i danRer4.chrM C 0 C 0
|
|
840
|
+
e xenTro2.scaffold_18215 3326 0 + 3330 I
|
|
841
|
+
|
|
842
|
+
a score=401805.000000
|
|
843
|
+
s mm8.chrM 4544 198 + 16299 TTACAGCCCCTATATTCATAGCACTTATACTAAAT-AA-----CT-CTATAACCATC---AACTCAATCTCACTTCTATGAAATAAAACTCCAGCAATACTAACTATAATCTCACTGATATTACTATCCCTAGGAGGCCTTCCACCACTAA----------CAGGATTCTTACCAAAATGAATTATCATCACAGAACTTATAAAAAACAACTGTCTAA
|
|
844
|
+
s rn4.chrM 4522 198 + 16300 TTACTGTTCCAATATTCAATTACATCATAACAAAC-TC-----AG-CAACAACAATC---AACACACTCTCACTCGCATGAAATAAAACTCCCATAATCCTAACCATAGCATCCATCATCCTCCTATCACTAGGAGGACTCCCCCCTCTCA----------CAGGATTTTTACCAAAATGAGCAATTATCTCCGAGCTTCTAAAAAACAACTGCTCAA
|
|
845
|
+
i rn4.chrM C 0 C 0
|
|
846
|
+
s oryCun1.scaffold_140182 4699 198 + 20791 TGACAATCCCTATATTCATAATATTCATACAGCAC-TC-----AA-GTACAACCACT---CTATCACTATCACAAATGTGAAACAAAAATCCACTAATAGTATCTACTATCCTAATCACCCTAATATCCCTAGGAGGCCTGCCCCCACTCA----------CAGGTTTTATCCCTAAATGAATTATCATCCAGGAATTAACAAAAAATGGCAATATCA
|
|
847
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
848
|
+
s hg18.chrM 5101 198 + 16571 TAACTACTACCGCATTCCTACTACTCAACTTAAAC-TC-----CA-GCACCACGACC---CTACTACTATCTCGCACCTGAAACAAGCTAACATGACTAACACCCTTAATTCCATCCACCCTCCTCTCCCTAGGAGGCCTGCCCCCGCTAA----------CCGGCTTTTTGCCCAAATGGGCCATTATCGAAGAATTCACAAAAAACAATAGCCTCA
|
|
849
|
+
i hg18.chrM C 0 C 0
|
|
850
|
+
s panTro2.chrM 4518 198 + 16554 TAACTACTACCGCATTTCTGCTACTCAACTTAAAC-TC-----CA-GCACCACAACC---CTACTACTATCTCGCACCTGAAACAAGCTAACATGATTAACTCCCCTAATTCCATCCACCCTCCTCTCCCTAGGAGGCCTACCCCCACTAA----------CTGGCTTCTTACCCAAATGAGTTATCATCGAAGAATTCACAAAAAATAATAGCCTCA
|
|
851
|
+
i panTro2.chrM C 0 C 0
|
|
852
|
+
s rheMac2.chr5 34440495 198 - 182086969 TAACAACAACTGCATTTCCAGCACTCAACCTGAGT-AT-----AA-GCACCACAAAG---CTATCATTATTTCACACCTGAAACAAATGAACATGGTTGACACCTGTAATTCCACTAATTCTACTATCCTTAGGAGGTTTATCCCCATTAA----------CAGGGTTCCTGCCTTAATGAATCACCATTCAAGAATTTACAGAAAACAATAGCCTTA
|
|
853
|
+
i rheMac2.chr5 C 0 C 0
|
|
854
|
+
s bosTau2.chrM 4896 198 + 16338 TAACTTCCACCATATTTACCATATTTATAGCCAAT-TC-----CA-CCACCACTACC---CTGTCATTATCACACACATGAAATAAAACACCCATTATAACCGTCCTAATTCTTGCCACTCTCCTATCCATAGGAGGACTCCCTCCCCTAT----------CTGGGTTTATACCAAAATGAATAATCATCCAAGAGATAACAAAAAATAACAGCATCA
|
|
855
|
+
i bosTau2.chrM C 0 C 0
|
|
856
|
+
s canFam2.chrM 4544 198 + 16727 TAACACTATCTACCTTCATACTATTTATATTAAAC-TC-----AT-CCACCACGACC---CTATCTTTATCCCACATATGAAACAAATTTCCCCTAATCACTTCCATAATCTTAATCTTAATACTATCCCTAGGAGGACTACCCCCATTAT----------CTGGCTTCATCCCCAAATGAATAATTATTCAAGAATTAACGAAAAATAACATAATTA
|
|
857
|
+
i canFam2.chrM C 0 C 0
|
|
858
|
+
s dasNov1.scaffold_23239 8358 198 - 16977 TAACAATCACAATATTTGCCCTCTTTA---TTAAC-TC-----AA-CAACAACAACTACACTATCTCTATCTCTTACATGAAACAGTACACCAATCCTAACAACAATGCTCCTAACAACCCTACTATCACTAGGAGGCCTTCCCCCACTAT----------CAGGCTTCGCACCAAAATGAATAATCATCCAAGAGATGACAAAAAACAACATACTCC
|
|
859
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
860
|
+
s loxAfr1.scaffold_36650 7543 198 + 16266 TAACACTGTCCATCTTTATAATTCTAA-CAAATAC-TT-----TCACAACTTCAATA---TCATCCCTAACTCTAATATGAAACAAAACACCTGCAATAACCATTATACTTATAACTACTTTACTATCTTTAGGAGGACTACCCCCACTAT----------CGGGATTCATACCCAAATGACTTATGATTCACGAACTAACCAAAAACAACAGTATTA
|
|
861
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
862
|
+
s echTel1.scaffold_181343 3910 198 + 18297 TCACATTTTCAGCATTCACCATCTTAATTAAATGC-TC-----TT-CAACCTCAACT---TCTATACTAACAATAACCTGAAATTCCTACCCATTAATAGTCTCTATCCTATTAATTATTCTTTTATCAATGGGAGGATTACCTCCATTAA----------CAGGTTTTGTACCTAAATGACTAATTATCTATGAACTGATTAAAAATACTAACATTG
|
|
863
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
864
|
+
s monDom4.chrUn 117155967 198 + 174229318 CAACCATTACCATATTCCTTATATTCAACCACTCA-TC-----AA-TAACCAAAATC---AACTCACTATCAACCCTATGAAACAAGTCTACCCCCATTACCATCATTATTATATTAACACTTCTATCCTTAGGGGGACTACCCCCATTAA----------CAGGTTTTATACCCAAATGATTAATTCTCCAAGAACTAATTTCATATAAAAATATAC
|
|
865
|
+
i monDom4.chrUn C 0 C 0
|
|
866
|
+
s galGal2.chrM 5871 198 + 16775 TGACCTCAACTGTATTCCTATCCCTAGCCCAAATC-AA-----AG-TCCTAAAACTG---TCAACACTACTCATCTCATGAACTAAAACCCCAATACTAAATGCAACTGTAATACTAACCCTCCTCTCCCTAGCTGGCCTCCCACCATTAA----------CCGGCTTCATGCCAAAATGACTCATTATCCAAGAACTAACCAAACAAGAAATAACCC
|
|
867
|
+
i galGal2.chrM C 0 C 0
|
|
868
|
+
s xenTro2.scaffold_96 2673143 176 - 2855184 TCACAGGCGAGACATCCCTGGCACATATACTAAATATT-----TC-TAACAATAATT------------------ACACAATATAA------------------TATGCACCTTCCAAACTTAGTGTCCCTGGGGTGCTGCCCTCTGCTAAAGCTTTATTTAAACATTCTCATTAAGAAAAATACTTTGTATAAAACTAACTGAGGGCATATTTTTAA
|
|
869
|
+
i xenTro2.scaffold_96 n 0 I 6355
|
|
870
|
+
s tetNig1.chrUn_random 103514406 198 + 171761319 TAACCTCCTCCGCCTTCCTCACATT-----CATCC-TCAACAAAA-CCACAACAATC---AATGCACTAGCCACATCCTGAGCCAAAACCCCCATTCTTACATCCCTCTTACCCCTTGTTCTCCTATCCCTCGGAGGCCTCCCTCCGCTAA----------CTGGCTTCATACCAAAATGACTAATCCTACAAGAACTAACTAAACACGATCTCGCCC
|
|
871
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
872
|
+
s danRer4.chrM 5623 198 + 16596 TAACATCCGCGGCATTCCTTACTTTAAAAGTATTA-TC-----AG-CCACAAAAATT---AACACCCTAACAACGACCTGACCGAAAAGCCCAATCCTGGCAGCAATTGCTACTTTAGTTATATTATCACTGGGAGGACTTCCCCCACTGA----------CGGGATTCATACCAAAATGATTAATCCTACAAGAGTTAACGAAACAAGACCTACCAG
|
|
873
|
+
i danRer4.chrM C 0 C 0
|
|
874
|
+
|
|
875
|
+
a score=271987.000000
|
|
876
|
+
s mm8.chrM 4742 205 + 16299 TTATAGCAACACTCATAGCAATAATAGCTCTACTAAACCTATTCTTTTATACTCGCCTAATTTATTCCACTTCACTAACAATATTTCCAA---CCAACAATAACTCAAAAATAATA-ACTCACCAAACAAAAACTAAACCCAACCTA---ATATTTTCCACC--CTAGCTATCATAAGCACAATA---------ACCCTACCCCTAGC-------CCCCC-------AACTAATTAC
|
|
877
|
+
s rn4.chrM 4720 205 + 16300 CCCTATCAACACTAATAGCTATCATAGCCCTATTAAGCCTATTCTTCTATACTCGACTAATTTACTCTATATCCCTCACCACATTCCCAA---CCAACAACAACTCCAAAATAATC-TCCCACCACCAAAACCCAAAACATAATTTT---ATCCTCCCAACC--CTCACAGTATTAAGTACCCTA---------ACCCTACCGCTTTC-------CTCCC-------AACTAATCAC
|
|
878
|
+
i rn4.chrM C 0 C 0
|
|
879
|
+
s oryCun1.scaffold_140182 4897 219 + 20791 TTTTACCCACCGCTATAGCCATGCTTGCCCTCCTAAATCTATATTTTTATATACGCCTTATCTATTCTTCCTCACTAACTATATTCCCTA---CCACCAACAATCTAAAAATAAAA-TGACAATTTGAATCAACAAAACGCATACCC---CTCATCACTCCA--CTAATTATTTTATCAACCATA---------CTCCTCCCCCTCACACCAGCACTCTCAGTATTAAATTAGCTTT
|
|
880
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
881
|
+
s hg18.chrM 5299 211 + 16571 TCATCCCCACCATCATAGCCACCATCACCCTCCTTAACCTCTACTTCTACCTACGCCTAATCTACTCCACCTCAATCACACTACTCCCCA---TATCTAACAACGTAAAAATAAAA-TGACAGTTTGAACATACAAAACCCACCCCA---TTCCTCCCCACA--CTCATCGCCCTTACCACGCTA---------CTCCTACCTATCTC-------CCCTT-TTATACTAATAATCTT
|
|
882
|
+
i hg18.chrM C 0 C 0
|
|
883
|
+
s panTro2.chrM 4716 211 + 16554 TCATCCCCACCATCATAGCCATCATCACTCTCCTTAACCTCTATTTCTACCTACGCCTAATCTACTCCACCTCAATTACACTACTTCCCA---TATCTAATAACGTAAAAATAAAA-TGACAATTCGAACATACAAAACCCACCCCC---TTCCTCCCTACA--CTCATCACCCTTACCACACTG---------CTTCTACCCATCTC-------CCCCT-TCATACTAATAATCTT
|
|
884
|
+
i panTro2.chrM C 0 C 0
|
|
885
|
+
s rheMac2.chr5 34440693 211 - 182086969 TTACCCCAATCATTACAGCCATCATAACCCTACTCAACCTGTACTTTTACATACGCCTAGTCTATTCCTTCTCAGTAATACTATTCCCCT---CATCTAACAATATGAAAATAAAA-TGACAATTTGGAAACACAAAACCCATACTA---CTTTTCCCCCAG--CTTGTCATCTCTTCTACCCTC---------CTCTTATCCATCTC-------TCCAT-TAATATTAAATATAAC
|
|
886
|
+
i rheMac2.chr5 C 0 C 0
|
|
887
|
+
s bosTau2.chrM 5094 211 + 16338 TTCTACCCACTTTCATAGCAATCACAGCTCTACTAAACTTATATTTTTATATACGACTCACGTATTCTACCACACTAACAATATTTCCCT---CCACAAACAACATAAAAATAAAA-TGACAATTTCCCCTTATGAAAAAAATAACT---TTTCTACCAACA--ATAGTCGTATTATCTACCATA---------ATACTACCACTCAC-------GCCAA-TACTATCAGTGTTAGA
|
|
888
|
+
i bosTau2.chrM C 0 C 0
|
|
889
|
+
s canFam2.chrM 4742 211 + 16727 TTATTCCAACACTAATGGCTATCACCGCTCTACTTAACTTATATTTCTACCTGCGACTCACATATAGCACCGCACTTACCATATTTCCAT---CCACAAACAACATAAAAATAAAA-TGACAGTTCGAATACACAAAAAAGGCAACC---CTATTACCCCCC--TTAATTATTACCTCAACTATA---------CTACTCCCACTAAC-------ACCTA-TATTATCAGTCTTGGA
|
|
890
|
+
i canFam2.chrM C 0 C 0
|
|
891
|
+
s dasNov1.scaffold_23239 8556 211 - 16977 TACTACCAACAACAATAGCCATTATGGCACTACTGAACCTCTATTTCTACATACGACTTATCTACTCAACATCACTCACAATATTCCCAA---CGACCAATAACAACAAAATAAAA-TGAAAATACAAAACACAAAATTTTATCCCC---CTATCACCAACA--TTAATTACACTATCCACAATA---------CTCATCCCCCTCAC-------TCCAA-TAATATTAATCTTAAA
|
|
892
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
893
|
+
s loxAfr1.scaffold_36650 7741 211 + 16266 TCATACCACTAACCATGGCCATTATAGCATTACTAAACATGTACTTCTACATACGACTAATCTACTACTCATCACTAACAATCCTACCAT---CTACAAATAATATGAAAATAACC-TGACGATTTACTAATACTAAACACACAATA---ACATTACCCACC--CTAATCACCCTATCTAACATA---------CTACTTCCCCTAAC-------CCCAA-TAATTTCAATGCTAGA
|
|
894
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
895
|
+
s echTel1.scaffold_181343 4108 211 + 18297 CCATAACACTAACAATATCTATCCTAGCCCTCTTGAATCTCTTCTTTTATTTACGCTTAATTTATGCATCCTCACTCACCCTGTTCCCGA---CAAGTAGTAATCTAAAATTCAAA-TGGAAA---ATCAATACCCCAAACAAAATATATTTTTTACCAACA--ATAGTCTCAATTTCACTACTT---------TTCCTTCCTGTCTC-------CCCAA-TAATTCTTATATTAAA
|
|
896
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
897
|
+
s monDom4.chrUn 117156165 211 + 174229318 CCCTAGCAACAGCACTAGCATTATCCGCACTACTAAACCTATTCTTTTATATACGAATTATTTATTTATCAACACTTACCATAGCACCGT---CCATTAATAACTCAAAAATACAA-TGAACTCTTCTACCCCCAAAAACACTCACA---CTCATTCCAACA--CTGACAATAATCTCATTACTA---------TTCTTACCTCTTAC-------CCCTA-TATTTATTGTACTCAC
|
|
898
|
+
i monDom4.chrUn C 0 C 0
|
|
899
|
+
s galGal2.chrM 6069 208 + 16775 CAATAGCCACAATCATCACAATACTATCACTCCTAAGCCTATTCTTCTACCTCCGACTTGCATACCACTCAACAATCACACTCCCCCCCAACTCATCAAACCACATAAAACTCTGA-CGA--------ACTAACAAAACCCTAAACA---CCCCCACCGCCATTCTAACTGCGCTATCAACCACC---------CTATTGCCCCTTTC-------CCCCC-TAATTATTACCATACT
|
|
900
|
+
i galGal2.chrM C 0 C 0
|
|
901
|
+
s tetNig1.chrUn_random 103514604 205 + 171761319 CAACAGCCACCCTGGCAGCACTCAGCGCCCTACTAAGCCTCTACTTCTATCTTCGCCTCTCCTACGCCATAACCCTAACAATCGCCCCCA---ACAAC-TTAACAGGGACCCTCCCATGACGTACCCAAACAACCCAACCAAACATG---ATAACCGCCACC--ATAACAGCCTCTTCAATCCTT---------CTCCTCCCCATGAC-------CCCTG-GAATTCTTAC------
|
|
902
|
+
i tetNig1.chrUn_random C 0 N 0
|
|
903
|
+
s danRer4.chrM 5821 205 + 16596 CCACAGCTACTATCATGGCGCTTACCGCCCTCCTAAGCTTATTTTTTTACCTACGTCTATGTCATGCAATAACATTAACGACTTCACCAA---ACACTATCAATTCAGCCCCTCAC-TGACGGGTACAAACGACCCA---AAAC-------TCACTAC--CC--CTAACAATCTCTGTTACTGTTACTATAGGACTTTTACCACTGAC-------CCCAG-CCATCTTAAT------
|
|
904
|
+
i danRer4.chrM C 0 I 9
|
|
905
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
906
|
+
|
|
907
|
+
a score=105153.000000
|
|
908
|
+
s mm8.chrM 4947 33 + 16299 CTAGAAG---------TTTAGGATATA-CT------AGTCCGCGAGC--CT
|
|
909
|
+
s rn4.chrM 4925 32 + 16300 ATAGAAG---------TTTAGGATATA-C-------AGTTCAAGAGC--CT
|
|
910
|
+
i rn4.chrM C 0 C 0
|
|
911
|
+
s oryCun1.scaffold_140182 5116 32 + 20791 AAAGGAG---------TTTAGGTTACA-C-------AGACCAAGAGC--CT
|
|
912
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
913
|
+
s hg18.chrM 5510 34 + 16571 ATAGAAA---------TTTAGGTTAAA-TA-----CAGACCAAGAGC--CT
|
|
914
|
+
i hg18.chrM C 0 C 0
|
|
915
|
+
s panTro2.chrM 4927 34 + 16554 ATAGAAA---------TTTAGGTTAAG-CA-----CAGACCAAGAGC--CT
|
|
916
|
+
i panTro2.chrM C 0 C 0
|
|
917
|
+
s rheMac2.chr5 34440904 33 - 182086969 TTAGAAA---------TTTAGGTTAAA-TA------AGACCGAGGAC--CT
|
|
918
|
+
i rheMac2.chr5 C 0 C 0
|
|
919
|
+
s bosTau2.chrM 5305 32 + 16338 ATAGGAA---------TTTAGGTTAAA-C-------AGACCAAGAGC--CT
|
|
920
|
+
i bosTau2.chrM C 0 C 0
|
|
921
|
+
s canFam2.chrM 4953 33 + 16727 CTAGGAG---------TTTAGGTTAGACC-------AGACCAAGAGC--CT
|
|
922
|
+
i canFam2.chrM C 0 C 0
|
|
923
|
+
s dasNov1.scaffold_23239 8767 33 - 16977 CTAGGGA---------TTTAGGTTAGA-CA------AGACCAAGAGC--CT
|
|
924
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
925
|
+
s loxAfr1.scaffold_36650 7952 32 + 16266 ATAGGAA---------TTTAGGTTAAA-C-------AGACCAAGAGC--CT
|
|
926
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
927
|
+
s echTel1.scaffold_181343 4319 33 + 18297 TTAGGGG---------GTTAGGTTAAATT-------AGACCAAGAGC--CT
|
|
928
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
929
|
+
s monDom4.chrUn 117156376 43 + 174229318 ATAAGAATTACAAGCTTTTATCTTGCA-T-------ACTTCGAACGCAAAT
|
|
930
|
+
i monDom4.chrUn C 0 C 0
|
|
931
|
+
s galGal2.chrM 6277 39 + 16775 ATAGAAA---------CTTAGGATTAA-CTGTCACCAAACCAAAGGC--CT
|
|
932
|
+
i galGal2.chrM C 0 C 0
|
|
933
|
+
s danRer4.chrM 6035 33 + 16596 ATAGAGA---------CTTAGGATAAC-CT------AGACCAAGAGC--CT
|
|
934
|
+
i danRer4.chrM I 9 C 0
|
|
935
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
936
|
+
|
|
937
|
+
a score=2531764.000000
|
|
938
|
+
s mm8.chrM 4980 575 + 16299 TCAAAGCCCTAAGA--AAAC---ACA-CAAGTTTAACTTCTG--------A------------TAAGGACTGTAAGACTTCA-TC--CTACATCTATTGAA--TGCAAATCAAT---------TGCTTTA-------AT-TAAGCTAAGACCTC--------AA-CTAGATTGGCAGGAATTAAA--CCTACG-AAA---ATTTAGTTAACAGCTAAATAC-CCTA----T-TACTGGCTTCAATCTA-CTTCTACC--GCCG--A--A------AAAAAAA--AATGGCGGTA-----GAAGTCTTAGTA-GAGAT--TT-CTCTACACCTTCGAAT-----------------TTGCAATTCGACATGA-ATAT---CACCTT----AAGACCTCT-------------------GGTAAAAAGA--GGATTTAAACCTCTGTGTTTAGATTTACAGTCTAATGCT---T----ACTCAGCCATTTTA----------------------------------CC-----------TATG---TTCATTAATCGTTGATTATTCTCAACCAATCACAAAGATATCGGAACCCTCTATCTACTATTCGGAGCCTGAGCGGGAATAGTGGGTACTGCACTAAGTATTTTAATTCGAGCAGAATTAGGTCAACCAGGTGCACTTTTAGGAGATGACCAAATTTACAATGTTATCGTAACTGCCCATGCTTTTGTTATAATTTTCTTCATAGTAATACCAATAATAATTGGA
|
|
939
|
+
s rn4.chrM 4957 579 + 16300 TCAAAGCCCTTAGA--AAAC---AAA-CAAGTTTAACTTCTG--------A------------TAAGGACTGTAAGACTATA-TC--TTACATCTGTTAAA--TGCAAATCAAC---------TGCTTTA-------AT-TAAGCTAAATCCTC--------AA-CTAGATTGGAAGGAATCAAATTCCTACG-AAA---ATTTAGTTAACAGCTAAATAC-CCTA---CT-TACTGGCTTCAATCTA-CTTCTCCC--GCCT--A--T------CAGAAAA--GA-GGCGGGA-----GAAGCCTTAGTA-GAGGAGATT-CTCTACACCTTCGAAC-----------------TTGCAATTCGACATGA-TAAT---CACCTT----AAGGCTTTT------------------TGGTAAAAAGG--GGGCTCAA-CCCCTGTCTTTAGATTTACAGTCTAATGCT---T----ACTCAGCCATTTTA----------------------------------CC-----------TATG---TTCGTAAACCGTTGACTCTTTTCAACTAACCACAAAGATATCGGAACCCTCTACCTATTATTTGGAGCCTGAGCAGGAATAGTAGGGACAGCTTTGAGTATTCTAATTCGAGCTGAACTAGGACAGCCAGGCGCACTCCTAGGAGATGACCAAATCTATAATGTCATCGTCACAGCCCATGCATTCGTAATAATTTTCTTTATAGTAATACCTATAATAATTGGA
|
|
940
|
+
i rn4.chrM C 0 C 0
|
|
941
|
+
s oryCun1.scaffold_140182 5148 581 + 20791 TCAAAGCTCTAAGC--AAGT---AGATCATACTTAACCCCTG--------CT-----------TAAGGACTGCAAA--TTAA-CT--TTACATCTCCTGAA--TGCAAACCAGG---------TGCTTTA-------AT-TAAGCTAAATCCTC-----------CTAGATTGGTGGGCTCCAAC--CCCACG-AAG---CTTTAGTTAACAGCTAAATAC-CCTAG--TC-AACTGGCTTCAACCTA-CTTCTCCC--GCCGTAA--G------AAAAAAA--AA-GGCGGGA-----GAAGCCCCGGCA-GAGTT--GA-AGCTGCTTCTTTGAAT-----------------TTGCAATTCAATATGT-GAGTACCCACCTC----AGGGCTT---------------------GGTAAAAAGA--GGGCTTAA-CCTCTGTCTTTAGATTTACAGTCTAATACC---T----ACTCGGCCATTTTA----------------------------------CCCTT-----ACTTATG---TTCGTCAATCGTTGACTTTTCTCTACCAACCACAAAGACATCGGCACTCTTTATCTCCTATTTGGAGCTTGAGCTGGGATGGTGGGAACAGCCCTTAGCCTGCTAATTCGAGCAGAATTAGGTCAGCCAGGGACTCTACTCGGGGATGATCAAATCTATAATGTAATCGTCACCGCACATGCCTTTGTAATAATCTTCTTTATAGTCATACCTAT-ATAATTGGA
|
|
942
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
943
|
+
s hg18.chrM 5544 588 + 16571 TCAAAGCCCTCAGT--AAGT---TGC-AATACTTAATTTCTGCAACAG--C------------TAAGGACTGCAAAACCCCA-CT--CTGCATCAACTGAA--CGCAAATCAGC---------CACTTTA-------AT-TAAGCTAAGCCCTT---------A-CTAGACCAATGGGACTTAAA--CCCACA-AAC---ACTTAGTTAACAGCTAAGCAC-CCTAA--TC-AACTGGCTTCAATCTA-CTTCTCCC--GCCG--C--C------GGGAAAA--AA-GGCGGGA-----GAAGCCCCGGCA-GGTTT--GA-AGCTGCTTCTTCGAAT-----------------TTGCAATTCAATATGA-AAAT---CACCTC----GGAGCT----------------------GGTAAAAAG---AGGCCTAA-CCCCTGTCTTTAGATTTACAGTCCAATGCT---T---CACTCAGCCATTTTA----------------------------------CCTCACCCCCACTGATG---TTCGCCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCGCATGAGCTGGAGTCCTAGGCACAGCTCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAATACCCATCATAATCGGA
|
|
944
|
+
i hg18.chrM C 0 C 0
|
|
945
|
+
s panTro2.chrM 4961 587 + 16554 TCAAAGCCCTCAGC--AAGT---TAC-AATACTTAATTTCTGCAACAA--C------------TAAGGACTGCAAAACCCCA-CT--CTGCATCAACTGAA--CGCAAATCAGC---------CACTTTA-------AT-TAAGCTAAGCCCTT---------A-CTAGATTAATGGGACTTAAA--CCCACA-AAC---ATTTAGTTAACAGCTAAACAC-CCTAA--TC-AACTGGCTTCAATCTA-CTTCTCCC--GCCG--C--A------AGAAAAA--AA-GGCGGGA-----GAAGCCCCGGCA-GGTTT--GA-AGCTGCTTCTTCGAAT-----------------TTGCAATTCAATATGA-AAAT---CACCTC----AGAGCT----------------------GGTAAAAAG---AGGCTTAA-CCCCTGTCTTTAGATTTACAGTCCAATGCT---T---CACTCAGCCATTTTA----------------------------------CCCCA-CCCTACTGATG---TTCACCGACCGCTGACTATTCTCTACAAACCACAAAGATATTGGAACACTATACCTACTATTCGGTGCATGAGCTGGAGTCCTGGGCACAGCCCTAAGTCTCCTTATTCGGGCTGAACTAGGCCAACCAGGCAACCTCCTAGGTAATGACCACATCTACAATGTCATCGTCACAGCCCATGCATTCGTAATAATCTTCTTCATAGTAATGCCTATTATAATCGGA
|
|
946
|
+
i panTro2.chrM C 0 C 0
|
|
947
|
+
s rheMac2.chr5 34440937 590 - 182086969 TCAAAGTCCTTAGT--AAGTA--AGT-TACTCTTAATTTCTGTAACAGATC------------TAAAGATGGCAAGATGCTA-TT--CTGCATCAATTGAA--CGCAAATCAAC---------CACTTTG-------AT-TAAGCTAAGCCCTT---------A-CTAGATTTATGGAATTCAAA--CCCACG-AATAAAATTTAGTTAACGGCTAAGCAC-CCTAA--TC-AACTGGCTTCAATCTA-CCCCCGCC--GCCG--T--T------GGGGGAG--AA-AGGCAGA-----GAAGACCCAGCA-GGATT--GA-AGCTTCTCCTTTGACT-----------------TTGCAATTCAACATGAGAAAT---CACCTC----AGGGCT----------------------GCTAAAAAGC--AGCCTTGA-CCTCTGTCTTTAGATTTACAGTCTAATGCT---T----ACTCAGCCATTTTA----------------------------------CCTTTTCCCCACTTATG---TTCATCAATCATTGATTGTTTTCAGCTAACCACGAAGATATCGGAACACTATACCTGCTAT--GGCGC---AGTGGAGATAGTAGGCACCGCCTTAAGCCTTCTAATTCCAGCAGAACTAGGCCAACCAGGAACTCTGCTAGGAGATGATCAGATCTACAATGTTATTGTTACCGCTCACACATTCGTTATAATTTTATTTATGATAACACTAATCATGATTGGG
|
|
948
|
+
i rheMac2.chr5 C 0 C 0
|
|
949
|
+
s bosTau2.chrM 5337 577 + 16338 TCAAAGCCCTAAGC--AAGTA--CAA-TTTACTTAATTCCTG--------A------------TAAGGATTGCAAGACTACA-CC--TTACATCAATTGAA--TGCAAATCAAC---------CACTTTA-------AT-TAAGCTAAATCCTC---------A-CTAGACTGGTGGGCTCCACC--CCCACG-AAA---CTTTAGTTAACAGCTAAACAC-CCTAG--CT-AACTGGCTTCAATCTA-CTTCTCCC--GCCG--CA-A------GAAAAAA--AA-GGCGGGA-----GAAGCCCCGGCA-GAATT--GA-AGCTGCTTCTCTGAAT-----------------TTGCAATTCAACGTGT-AAAT--TCACCAC----AGGGCTT---------------------GGTAAAAAGA--GGAGTCAAACCTCTATCTTTAGATTTACAGTCTAATGCT---T---TGCTCAGCCATTTTA----------------------------------CC-----------CATG---TTCATTAACCGCTGACTATTCTCAACCAACCATAAAGATATTGGTACCCTTTATCTACTATTTGGTGCTTGGGCCGGTATAGTAGGAACAGCTCTAAGCCTTCTAATTCGCGCTGAATTAGGCCAACCCGGAACTCTGCTCGGAGACGACCAAATCTACAACGTAGTTGTAACCGCACACGCATTTGTAATAATCTTCTTCATAGTAATACCAATCATAATTGGA
|
|
950
|
+
i bosTau2.chrM C 0 C 0
|
|
951
|
+
s canFam2.chrM 4986 590 + 16727 TCAAAGCTCTAAGC--AAGTG--CTA-CACACTTAACCCCTG--------ATCAAATCACCTCTAAGGGCTGCAAGAATCTA-TC--TTACATCAATTGAA--TGCAAATCAAA---------CACTTTA-------AT-TAAGCTAAGCCCTC---------C-CTAGATTGGTGAGCTTCTAC--CTCACG-AAA---TTTTAGTTAACAGCTAAATAC-CCTAG---T-AACTGGCTTCAATCTACCTTCTCCC--GCCG--CGTA------GAAAAAA--AA-GGCGGGA-----GAAGCCCCGGCG-GCGTC--TA-GGCTGCTTCTTTGAAT-----------------TTGCAATTCAATATGA-AAAT--TCACCAC----GGAGCTT---------------------GGCAAAAAGA--GGACTTAAACCCCTATCTTTAGATTTACAGTCTAATGCT---T---TTATCAGCCATTTTA----------------------------------CC-----------TATG---TTCATTAACCGATGACTGTTCTCCACTAATCACAAGGATATTGGTACTTTATACTTACTATTTGGAGCATGAGCCGGTATAGTAGGCACTGCTTTGAGCCTCCTCATCCGAGCCGAACTAGGTCAGCCCGGTACTTTACTAGGTGACGATCAAATTTATAATGTCATCGTAACCGCCCATGCTTTCGTAATAATCTTCTTCATAGTCATGCCCATCATAATTGGG
|
|
952
|
+
i canFam2.chrM C 0 C 0
|
|
953
|
+
s dasNov1.scaffold_23239 8800 579 - 16977 TCAAAGCCCTTAGC--AAGTA--AAA-ATTACTTAATCCCTG--------ACG----------TAAGGACTGCAAGATTTAG-CC--CCACATCTCCTGAA--CGCAAATCAGG---------CACTTTA-------AT-TAAGCTAAGTCCTC---------T-CTAGACTGGTGGGCTCCAAC--CCCACG-AAA---TTTTAGTTAACAGCTAAATAC-CATAA--TC-ACCTGGCTTCAATCTA----TTCCC--ACCT--C--A------AAAACAA--GC-CAAAGGAATCATAAAGCCCTGGCA-GAGTT--TACAGCTGCTTCTCTGAAC-----------------TTGCAATTCAA-ATAG-TATT--------C----AAGGCTTAT--------------TTAATGGTAAAAAAA--GGACTTCA-CCTTTGTCTTTAGATTTACAGTCTAATGCT---T----ACTCAGCCATTTTA----------------------------------CC-----------CATG---TTCATTACCCGTTGACTATTTTCAACAAACCACAAAGATATTGGAACTCTATATTTACTATTTGGCGCCTGGGCTGGAATAGTAGGCACCGCCCTAAGTCTACTAATTCGTGCCGAGCTTGGCCAACCAGGCACATTACTAGGAGACGATCAAATTTATAATGTAATTGTTACCGCCCATGCATTCATCATAATTTTCTTTATAGTAATACCAATCATGATCGGG
|
|
954
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
955
|
+
s loxAfr1.scaffold_36650 7984 579 + 16266 TCAAAGCCCTAAGT--AAGTA--CAT-TATACTTAACTCCTG----AA--A------------TAAGGACTGCAAGATACTA-TC--TTACATCAACTGAA--TGCAAATCAGA---------CGCTTTA-------AC-TAAACTAAGCCCT----------T-CTAGATTGGAGGGCTTCAAT--CCCACGAAAT---TCTTAGTTAACAACTAAACAC-CCTAG--CT-AACTGGCTTCAATCTA-CTTCTCCC--GCCT--T--GAGGGAGGGGGAAA--AA-GGCGGGA-----GAAGCCCCGGCA-GAATT--GA-AGCTGCTTCTTCGAAT-----------------TTGCAGTTCGACATGT-TTAC--AC-TTTC----AAGGCCT---------------------GGCAAAAA----GAGATTAC-TCTCTGTGGTTAGATTTACAGTCTAATGCC---T----ACTCAGCCATTTTA----------------------------------CC-----------TATG---TTTGCTAACCGCTGACTATATTCAACGAACCACAAAGATATCGGAACACTGTATCTATTATTTGGTGCTTGAGCTGGTATAGTAGGGACTGCTTTTAGTATCCTAATTCGGGCAGAACTAGGCCAACCAGGCTCTCTTCTTGGAGATGATCAAATCTACAATGTTATTGTCACAGCACACGCCTTCGTAATAATCTTCTTTATAGTCATGCCAATTATAATTGGA
|
|
956
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
957
|
+
s echTel1.scaffold_181343 4352 619 + 18297 TCAAAGCTCTAAGC--AAGTA--AAC-AATACTTACCCTCTG-----A--A------------TAAGGACTGCAAGACTGTACTC--TTACATCAATTGGA--CGCAAACCAAA---------CACTTTA-------ACTTAAGCTAAATCC-----------T-CTAGATTGATGGGGTTTAAA--CCCATG-AAC---TATTAGTTAACAGCTAATTAC-CCTAC--CTCAACTGGCTTCAATCTA-C-TCTCCC--GCCT--T--T-GAATAGAAAAAA--AA-GGCGGGA-----GAAGCCCCGGCA-GATTT--GA-AGCTGCTTCTTCGAAT-----------------TTGCAATTCAATATGA-ATAC--TCACTTC----AGAGCCT---------------------AGTAAAAAGGAGGAGCCTCC-CTCCTGTCTTTAGATTTACAGTCTAATGCCTATT----ACTCAGCCATTTTACTTTCATATATTAGAACTTCCTTCTATACCCTTTCT-----------TATG---TTCATAAACCGTTGACTATACTCTACTAACCATAAAGACATTGGAACCCTCTACTTATTATTCGGAGCTTGAGCTGGCACAGTAGGAACTGCTCTTAGCCTCCTAATCCGTGCTGAACTCGGACAGCCAGGAGCCCTACTAGGTGATGATCAAATCTATAACGTAATCGTAACTGCACACGCCTTCGTTATAATTTTCTTTATAGTTATACCCATTATGATTGGG
|
|
958
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
959
|
+
s monDom4.chrUn 117156419 635 + 174229318 CGAACGCTTTAATT--AAGC---TAA-ACCCTTAAACTACTA--------T------------TTAAACCTCGGTAGCTTTA-CTAACTAC-TTTTTTGAATTTGCAATTCAACGTATTAATATACTTCAAGATTAGAT-TATCCTAAAGGCTTAGGATAAAAT-CTAGACCGAAGG----------CCTTCA-AAG---CCTTAAGCAGGTGATAAATCCACCTAGCCTT-TACTAATTAC-ATCAA-GCTCTCCC--GCCT--TG-G------AGAAAAA--AA-GGCGGGA-----GAGCCCCGGGCA-GCCCT--ATTAATTGTTTCATAAACTAAACTGGTGGGTATTTATCCCACTCTATCTTAA-TTAA---CAGTTA----AGCGCCTGTCTTTCGGCCTCAGTTTAGTGGTAAAAAGA--GATGTTAT-TCTCTGTCTTTGAATTTACAGTTCAATGCC---T---AGCTCAGCCATTTTA----------------------------------CC-----------TATG---TTCATTAATCGTTGACTCTTCTCAACTAACCATAAAGATATTGGTACTTTATATTTATTATTTGGTGCTTGAGCAGGAATAGTTGGAACCGCACTAAGCCTCCTAATTCGAGCAGAATTAGGCCAACCAGGGACTCTAATTGGTGATGATCAAATTTATAACGTAATCGTAACTGCCCACGCTTTCGTTATAATTTTCTTCATAGTAATACCTATCATGATTGGA
|
|
960
|
+
i monDom4.chrUn C 0 C 0
|
|
961
|
+
s galGal2.chrM 6316 559 + 16775 TCAAAGCCTTAAAT--AAGAGTTAAA-CTCTCTTAGTTTCTG-CCCAA--C------------TAAGACCAACAGGACATTA-AC--CTGTATCTCCTGAA--TGCAAATCAGA---------CGCTTTA-------AT-TAAGCTAAGGCCTC-------TAC-CTAGACAGATGGGCTTCGAT--CCCATA-CAA---TTTTAGTTAACAGCTAAATGC-CAACA--CC-AATTGGCTTCTGCCTA-----------------C--A------------------------------GA--CCCCGGCA-CACTT--TA-GTGTACATCAACGAGT-----------------TTGCAACTCATTATGA-ACTT---CACTAC----AGAGTC----------------------GATAAGAAGA--GGAATTGAACCTCTGTAAAAAGGACTACAGCCTAACGCT---TCAACACTCAGCCATCTTA----------------------------------CC-----------TGTGACCTTCATCAACCGATGATTATTCTCAACCAACCACAAAGACATTGGCACTCTTTACCTAATTTTCGGCACATGGGCGGGCATAGCCGGCACAGCACTTAGCCTTCTAATTCGCGCAGAACTAGGACAGCCCGGAACTCTCTTAGGAGACGATCAAATTTACAATGTAATCGTCACAGCCCATGCTTTCGTCATAATCTTCTTTATAGTTATACCCATCATGATCGGT
|
|
962
|
+
i galGal2.chrM C 0 C 0
|
|
963
|
+
s tetNig1.chrUn_random 161619026 580 + 171761319 TCAAAGCCCTCAGCGGGAGTG--AAA-ATCTCCCAGTCCCTG--------A------------TAAGACTTGCGGGACACTA-CC--CCACATCTCCTGCA--TGCAAAACAGA---------CACTTTA-------AT-TAAGCTAAAGCCTT---------ACCTAGACAGGCAGGCCTCGAT--CCTACA-AAC---TCTTAGTTAACAGCTAAGCGC-TCAAA--CC-AGCGAGCATCTATCTA-CCTTTCCCCGCCTG--T--C------AAAACAA--AA-GGCGGGG-----AAAGCCCCGGCA-GACGT--CA-ATCTGCTTCTTTAGAT-----------------TTGCAATCTAACATGT---AA---CACCCC----AGGGCTT---------------------GGTAGAAAGA--GGAATTTAACCTCCGTACGTGGGGCTACAATCCACCGCT---T-AACACTCAGCCATCCTA----------------------------------CC-----------TGTG---GCAATCACACGCTGATTTTTCTCAACCAACCATAAAGACATCGGCACCCTCTACCTAGTATTTGGTGCCTGAGCCGGAATAGTGGGAACGGCCCTTAGCCTCCTCATCCGAGCTGAACTTAGCCAACCAGGCGCACTCTTGGGTGATGACCAGATTTATAATGTAATCGTCACAGCCCATGCATTTGTAATAATTTTCTTTATAGTAATGCCAATCATGATTGAA
|
|
964
|
+
i tetNig1.chrUn_random N 0 N 0
|
|
965
|
+
s danRer4.chrM 6068 584 + 16596 TCAAAGCTCTCAGTAGAAGTG--AAA-ATCTTCTAGTCTCTG--------A------------TAGGACTTAC-AGACGTTA-CT--CCGCATCTTCTAAA--TGCAAATCAGA---------TATTTTA-------AT-TAAACTAAAGCCCT---------A-CTAGATGGGAAGGCCTCGAT--CCTACA-AAA---TCTTAGTTAACAGCTAAGCGC-CCAAG--CC-AGCGAGCATCCATCTA-CTTTTCCC--GCCG--T--T------GAACCCGGTAA-GGCGGGA-----AAAGCCCCGGCAGGAGGT--TT-ACCTGCGTCTTCAGAT-----------------TTGCAATCTGATATGT---AT---CATCACCACGAGGCCAT---------------------GGTAGAAAAA--GGACTCAAACCTCTGTCCGCGGAGCTACAATCCGCCGCC---TAAACACTCGGCCACCCTA----------------------------------CC-----------TGTG---ACAATCACACGTTGATTTTTCTCAACTAATCATAAAGACATTGGCACCCTGTATCTAGTATTTGGTGCTTGAGCCGGAATAGTAGGGACCGCATTAAGCCTCTTAATCCGAGCTGAACTTAGCCAACCAGGAGCACTTCTTGGTGATGATCAAATCTATAATGTTATTGTTACTGCCCATGCTTTTGTAATAATTTTCTTTATAGTAATACCCATTCTTATTGGG
|
|
966
|
+
i danRer4.chrM C 0 C 0
|
|
967
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
968
|
+
|
|
969
|
+
a score=799335.000000
|
|
970
|
+
s mm8.chrM 5555 131 + 16299 GGCTTTGGAAACTGACTTGTCCCACTAATAATCGGAGCCCCAGATATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTCCTACCACCATCATTTCTCCTTCTCCTAGCATCATCAATAGTAGAAGC
|
|
971
|
+
s rn4.chrM 5536 131 + 16300 GGCTTCGGAAACTGACTTGTACCACTAATAATTGGAGCCCCTGATATAGCATTCCCACGAATAAATAACATAAGCTTTTGACTGCTTCCTCCATCATTTCTACTCCTTTTAGCATCCTCCATAGTAGAAGC
|
|
972
|
+
i rn4.chrM C 0 C 0
|
|
973
|
+
s oryCun1.scaffold_140182 5729 131 + 20791 GGCTTCGGGAACTGGCTTGTCCCCCTGATAATTGGGGCTCCTGACATAGCCTTCCCCCGAATAAATAATATGAGCTTCTGACTTCTCCCCCCTTCATTCCTTCTTCTACTAGCCTCCTCAATAGTAGAAGC
|
|
974
|
+
i oryCun1.scaffold_140182 C 0 M 264
|
|
975
|
+
s hg18.chrM 6132 131 + 16571 GGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCCCCGATATGGCGTTTCCCCGCATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTCTCCTACTCCTGCTCGCATCTGCTATAGTGGAGGC
|
|
976
|
+
i hg18.chrM C 0 C 0
|
|
977
|
+
s panTro2.chrM 5548 131 + 16554 GGCTTTGGCAACTGGCTAGTTCCCTTGATAATTGGTGCCCCCGACATGGCATTCCCCCGCATAAACAACATAAGCTTCTGGCTCCTGCCCCCTTCTCTCCTACTTCTACTTGCATCTGCCATAGTAGAAGC
|
|
978
|
+
i panTro2.chrM C 0 C 0
|
|
979
|
+
s rheMac2.chr5 34441527 131 - 182086969 GTTTTCGGCAACTGGCTAGTCCCTCTGACCATTGGTTGACTGGACATGGCATCCCCCTGAATAAATAATATGATTTTCTGACTTCTCCCCCTATCTTTTCTACTCCTACTTGCGTCTTCAATAGTAGAAGC
|
|
980
|
+
i rheMac2.chr5 C 0 C 0
|
|
981
|
+
s bosTau2.chrM 5914 131 + 16338 GGATTCGGTAACTGACTTGTTCCCCTAATAATTGGTGCTCCCGATATAGCATTTCCCCGAATAAATAATATAAGCTTCTGACTCCTCCCTCCCTCATTCCTACTACTCCTCGCATCCTCTATAGTTGAAGC
|
|
982
|
+
i bosTau2.chrM C 0 C 0
|
|
983
|
+
s canFam2.chrM 5576 131 + 16727 GGCTTTGGAAACTGACTAGTGCCGTTAATAATTGGTGCTCCGGACATGGCATTCCCCCGAATAAATAACATGAGCTTCTGACTCCTTCCTCCATCCTTTCTTCTACTATTAGCATCTTCTATGGTAGAAGC
|
|
984
|
+
i canFam2.chrM C 0 C 0
|
|
985
|
+
s dasNov1.scaffold_23239 9379 131 - 16977 GGCTTCGGAAACTGATTAGTCCCATTAATAATTGGCGCGCCCGATATAGCCTTCCCACGAATAAACAACATAAGTTTCTGACTATTACCCCCTTCATTCCTACTCCTACTAGCCTCCTCTATAGTAGAAGC
|
|
986
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
987
|
+
s loxAfr1.scaffold_36650 8563 131 + 16266 GGCTTTGGAAACTGGTTAATTCCACTTATAATTGGAGCACCTGATATAGCTTTTCCTCGAATAAACAATATGAGTTTTTGACTACTGCCTCCATCTTTCCTACTACTTTTAGCATCCTCTATAGTAGAAGC
|
|
988
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
989
|
+
s echTel1.scaffold_181343 4971 131 + 18297 GGATTTGGTAACTGACTGATCCCATTAATGATTGGTGCCCCTGACATAGCTTTCCCCCGAATAAATAACATAAGTTTCTGGCTCCTTCCCCCCTCTTTTCTTCTTCTGTTAGCTTCATCTATAGTTGAAGC
|
|
990
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
991
|
+
s monDom4.chrUn 117157054 131 + 174229318 GGTTTTGGTAACTGACTAGTACCACTAATAATTGGAGCACCAGATATAGCATTTCCCCGAATAAATAATATAAGTTTCTGACTACTACCACCCTCATTCCTTCTTTTACTAGCATCATCCACAGTTGAAGC
|
|
992
|
+
i monDom4.chrUn C 0 C 0
|
|
993
|
+
s galGal2.chrM 6875 131 + 16775 GGCTTCGGAAACTGACTAGTCCCACTTATAATCGGTGCCCCAGACATAGCATTCCCCCGCATAAATAACATAAGCTTCTGACTCCTCCCTCCCTCCTTCCTTCTCCTACTAGCCTCATCTACCGTAGAAGC
|
|
994
|
+
i galGal2.chrM C 0 C 0
|
|
995
|
+
s tetNig1.chrUn_random 417498 131 - 171761319 GGTTTTGGTAATTGGTTTGTTCCTTTGATGTTGGGAGCTCCAGATATAGCATTTCCAAGGTTGAACAACATTAGTTTTTGGCTTTTGCCACCTTCTTTGCTTCTATTGGTAAGTTCTTCTTTGGTAGAGGC
|
|
996
|
+
i tetNig1.chrUn_random N 0 C 0
|
|
997
|
+
s danRer4.chrM 6652 131 + 16596 GGATTTGGAAACTGACTTGTGCCACTAATGATTGGGGCCCCCGATATGGCATTTCCCCGAATAAATAATATAAGCTTCTGACTTCTTCCACCCTCATTTCTTCTTCTATTAGCTTCTTCTGGAGTTGAAGC
|
|
998
|
+
i danRer4.chrM C 0 C 0
|
|
999
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
1000
|
+
|
|
1001
|
+
a score=1518153.000000
|
|
1002
|
+
s mm8.chrM 5686 281 + 16299 AGGAGCAGGAACAGGATGAACAGTCTACCCACCTCTAGCCGGAAATCTAGCCCATGCAGGAGCATCAGTAGACCTAACAATTTTCTCCCTTCATTTAGCTGGAGTGTCATCTATTTTAGGTGCAATTAATTTTATTACCACTATTATCAACATGAAACCCCCAGCCATAACACAGTATCAAACTCCACTATTTGTCTGATCCGTACTTATTACAGCCGTACTGCTCCTATTATCACTACCAGTGCTAGCCGCAGGCATTACTATACTACTAACAGACCGCA
|
|
1003
|
+
s rn4.chrM 5667 281 + 16300 TGGAGCTGGAACAGGATGAACAGTATATCCCCCCTTAGCCGGAAACCTAGCCCATGCTGGGGTATCCGTAGATTTAACTATTTTTTCCCTCCACCTAGCCGGGGTGTCTTCTATCTTAGGAGCTATCAACTTTATCACCACTATCATTAATATAAAACCCCCTGCTATAACCCAATATCAGACACCTCTCTTTGTATGATCCGTACTAATTACAGCCGTCCTACTACTTCTCTCACTGCCAGTATTAGCAGCAGGTATCACTATACTCCTTACAGACCGAA
|
|
1004
|
+
i rn4.chrM C 0 C 0
|
|
1005
|
+
s oryCun1.scaffold_205008 3325 279 - 118789 TGGGGCGGGGACTGGCTGAACTGTTTATCCACCTCTAGCCGGTAATCTTGCACATGCTGGAGCCTCAGTGGATCTTACTATTTTCTCCCTTCACTTAGCTGGAGTATCATCTATTTTAGGGGCTATTAACTTTATTACAACTATTATTAATATGAAACCCCCTGCAATATCTCAATATCAAACCCCCTTATTCGTATGATCTGTTCTAATCACAGCCGTACTTCTTCTTCTCTCTTTACCGGTCCTAGCTGCTGGCATTACAATGCTTTTAACAGACCG--
|
|
1006
|
+
i oryCun1.scaffold_205008 I 2359 n 0
|
|
1007
|
+
s hg18.chrM 6263 281 + 16571 CGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCTAGCAGGTGTCTCCTCTATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAAACCCCCTGCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTCCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGACCGCA
|
|
1008
|
+
i hg18.chrM C 0 C 0
|
|
1009
|
+
s panTro2.chrM 5679 281 + 16554 CGGCGCGGGAACAGGTTGAACAGTCTACCCTCCCTTAGCGGGAAACTACTCGCATCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACATCTGGCAGGCATCTCCTCTATCCTAGGAGCCATTAACTTCATCACAACAATTATTAATATAAAACCTCCTGCCATGACCCAATACCAAACACCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTCTTACTTCTCCTATCCCTCCCAGTCCTAGCTGCTGGCATCACCATACTATTGACAGATCGTA
|
|
1010
|
+
i panTro2.chrM C 0 C 0
|
|
1011
|
+
s rheMac2.chr5 34441658 280 - 182086969 TGGAGCTGGAACCAGCTGGACAGTTCGTCCCCCTTTAGCAGGAAACCTAGCACATGTAGGATCCTCTGTGGCTCTGACCATCTTCCCGCCCCACTTAGCAGGTGTTTTTTCTATTTTAGGGGCTATTAATTTTATTACCACAATTATTAACATAAAACCCCCAACCATATCCCAGTATCAAACACCCCTTTTCGTCTAATCAGTCCTCATTATGGCAGCCCTTCTGCTCCTTTCCCTCCTAGTCCTAGCCGCC-GCATTACTATACTGTTAACTGACCGTA
|
|
1012
|
+
i rheMac2.chr5 C 0 M 981
|
|
1013
|
+
s bosTau2.chrM 6045 281 + 16338 TGGGGCAGGAACAGGCTGAACCGTGTACCCTCCCTTAGCAGGCAACCTAGCCCATGCAGGAGCTTCAGTAGATCTAACCATTTTCTCTTTACACTTAGCAGGAGTTTCCTCAATTTTAGGAGCCATCAACTTCATTACAACAATTATCAACATAAAGCCCCCCGCAATGTCACAATACCAAACCCCTCTGTTCGTATGATCCGTAATAATTACCGCCGTACTACTACTACTCTCGCTCCCTGTATTAGCAGCCGGCATCACAATGCTATTAACAGACCGGA
|
|
1014
|
+
i bosTau2.chrM C 0 C 0
|
|
1015
|
+
s canFam2.chrM 5707 281 + 16727 AGGTGCAGGAACGGGATGAACCGTATACCCCCCACTGGCTGGCAATCTGGCCCATGCAGGAGCATCCGTTGACCTTACAATTTTCTCCTTACACTTAGCCGGAGTCTCTTCTATTTTAGGGGCAATTAATTTCATCACTACTATTATCAACATAAAACCCCCTGCAATATCCCAGTATCAAACTCCCCTGTTTGTATGATCAGTACTAATTACAGCAGTTCTACTCTTACTATCCCTGCCTGTACTGGCTGCTGGAATTACAATACTTTTAACAGACCGGA
|
|
1016
|
+
i canFam2.chrM C 0 C 0
|
|
1017
|
+
s dasNov1.scaffold_23239 9510 281 - 16977 TGGAGCAGGAACAGGCTGAACAGTATACCCGCCACTAGCAGGAAACCTAGCCCACGCAGGAGCATCCGTAGACCTAACAATTTTCTCCCTCCACCTTGCAGGAATCTCATCCATTCTAGGAGCCATCAACTTTATTACTACTATCATCAACATAAAACCCCCCGCAATAACACAATACCAAACCCCATTATTTGTATGATCAGTACTAGTAACAGCAGTCCTACTGCTGCTTTCCCTCCCAGTTCTAGCCGCTGGCATTACCATACTCCTAACAGACCGAA
|
|
1018
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1019
|
+
s loxAfr1.scaffold_36650 8694 281 + 16266 TGGGGCAGGCACTGGTTGGACCGTATACCCTCCCCTGGCAGGAAACCTGGCCCATGCAGGAGCTTCTGTGGATTTAACTATTTTTTCACTTCACCTTGCAGGAGTATCCTCTATTCTAAGTGCAATTAATTTTATCACTACCATCATCAACATAAAACCTCCAGCTATATCTCAATACCATATACCCTTATTTGTATGGTCCATTTTAATTACAGCCGTCCTTCTTCTTCTATCCCTCCCAGTTCTAGCAGCAGGTATTACAATATTACTAACGGATCGCA
|
|
1020
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1021
|
+
s echTel1.scaffold_181343 5102 281 + 18297 AGGAGCAGGAACAGGCTGAACTGTTTATCCCCCCTTAGCTGGTAATCTCGCACATGCCGGAGCCTCAGTTGACTTAACAATTTTTTCTCTTCACTTAGCAGGTGTTTCATCAATTTTAGGGGCTATTAATTTTATCACTACAGTAATTAATATAAAACCTCCAGCTATAACCCAATACCAAATACCCTTATTTGTCTGGTCAGTAGCTATTACTGCCGTACTTCTTCTACTTTCATTACCTGTACTTGCTGCAGGAATCACTATACTTCTGACAGACCGTA
|
|
1022
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1023
|
+
s monDom4.chrUn 117157185 281 + 174229318 AGGGGCAGGAACTGGTTGAACAGTATATCCCCCATTAGCAGGAAACCTAGCCCACGCAGGTGCCTCAGTAGACCTAGCAATCTTCTCACTTCACTTAGCTGGTATTTCCTCCATCTTAGGTGCTATTAATTTTATTACCACTATTATCAACATAAAACCCCCAGCAATATCTCAATACCAGACCCCGCTGTTTGTATGATCAGTTATAATTACAGCCGTGCTTCTACTACTGTCTCTTCCAGTTCTAGCTGCAGGCATTACTATACTATTAACTGATCGAA
|
|
1024
|
+
i monDom4.chrUn C 0 C 0
|
|
1025
|
+
s galGal2.chrM 7006 278 + 16775 TGGGGCCGGCACAGGATGGACAGTTTACCCCCCTTTAGCCGGCAACCTAGCCCACGCTGGCGCATCAGTAGACCTAGCCATCTTT---CATTACTTAGCAGGTGTTTCCTCCATTCTAGGAGCCATCAACTTTATCACTACCATCATCAACATAAAACCCCCCGCACTGTCACAATACCAAACACCCCTATTCGTATGATCCGTCCTCATTACTGCCATCCTACTACTCCTCTCCTTACCCGTCCTAGCAGCTGGGATTACCATACTACTTACCGACCGCA
|
|
1026
|
+
i galGal2.chrM C 0 C 0
|
|
1027
|
+
s tetNig1.chrUn_random 417629 281 - 171761319 AGGGGCTGGGACTGGGTGGACAGTTTATCCTCCATTGTCTGGAGTAGAAGCCCATTCTGGTTCTTCTGTAGATTTGGCTATTTTTAGTTTGCATTTGGCAGGGGTGTCTTCTTTGTTGGGAGCTATTAATTTTATTACTACTATTTTTAATATACGGGCTCCAGGGATAACAATGCATAGATTGCCTTTGTTTTGTTGGGCAGTTTTGATTACCGCTTTTTTGTTGTTGTTGTCGTTGCCAGTTTTGGCGGGGGCTATTACAATGCTATTGACAGATAGAA
|
|
1028
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1029
|
+
s danRer4.chrM 6783 281 + 16596 AGGAGCTGGAACAGGATGAACAGTTTATCCACCTCTTGCAGGCAACCTTGCCCATGCAGGAGCATCTGTTGATCTAACAATTTTTTCACTACACTTAGCAGGTGTTTCATCTATTCTTGGAGCAATTAATTTTATTACTACTACAATTAACATGAAGCCACCAACTATCTCTCAGTATCAAACTCCATTATTTGTATGAGCTGTCTTAGTTACAGCTGTACTACTTCTTTTATCTTTACCAGTGTTAGCTGCCGGAATTACAATACTTCTTACAGACCGAA
|
|
1030
|
+
i danRer4.chrM C 0 C 0
|
|
1031
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
1032
|
+
|
|
1033
|
+
a score=292962.000000
|
|
1034
|
+
s mm8.chrM 5967 43 + 16299 ACCTAAACACAACTTTCTTTGATCCCGCTGGAGGAGGGGACCC
|
|
1035
|
+
s galGal2.chrM 7284 43 + 16775 ACCTTAACACCACATTCTTCGACCCAGCTGGAGGAGGAGACCC
|
|
1036
|
+
i galGal2.chrM C 0 C 0
|
|
1037
|
+
s monDom4.chrUn 117157466 43 + 174229318 ATCTTAATACTACCTTCTTTGATCCTGCAGGTGGAGGAGATCC
|
|
1038
|
+
i monDom4.chrUn C 0 C 0
|
|
1039
|
+
s echTel1.scaffold_181343 5383 43 + 18297 ATCTCAACACTACATTTTTTGACCCTGCAGGAGGAGGAGACCC
|
|
1040
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1041
|
+
s loxAfr1.scaffold_36650 8975 43 + 16266 ATCTCAATACTACTTTTTTTGATCCTGCAGGAGGAGGAGACCC
|
|
1042
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1043
|
+
s dasNov1.scaffold_23239 9791 43 - 16977 ACCTTAATACCACATTCTTCGACCCAGCAGGAGGAGGGGACCC
|
|
1044
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1045
|
+
s canFam2.chrM 5988 43 + 16727 ATCTTAATACAACATTTTTTGATCCCGCTGGAGGAGGAGACCC
|
|
1046
|
+
i canFam2.chrM C 0 C 0
|
|
1047
|
+
s bosTau2.chrM 6326 43 + 16338 ACCTAAATACAACCTTCTTCGACCCGGCAGGAGGAGGAGACCC
|
|
1048
|
+
i bosTau2.chrM C 0 C 0
|
|
1049
|
+
s rheMac2.chr15 38001514 41 - 110119387 ACCTCAACACTAC--TTTTTGACCCTGCTGGTGGGGGTGATCC
|
|
1050
|
+
i rheMac2.chr15 n 0 C 0
|
|
1051
|
+
s panTro2.chrM 5960 43 + 16554 ACCTCAACACTACCTTCTTCGACCCAGCCGGGGGAGGAGACCC
|
|
1052
|
+
i panTro2.chrM C 0 C 0
|
|
1053
|
+
s hg18.chrM 6544 43 + 16571 ACCTCAACACCACCTTCTTCGACCCCGCCGGAGGAGGAGACCC
|
|
1054
|
+
i hg18.chrM C 0 C 0
|
|
1055
|
+
s oryCun1.scaffold_140182 6129 43 + 20791 AACTTAATACAACCTTCTTTGATCCTGCAGGAGGAGGAGACCC
|
|
1056
|
+
i oryCun1.scaffold_140182 M 264 C 0
|
|
1057
|
+
s rn4.chrM 5948 43 + 16300 ATCTAAATACTACTTTCTTCGACCCCGCTGGAGGTGGAGACCC
|
|
1058
|
+
i rn4.chrM C 0 C 0
|
|
1059
|
+
s tetNig1.chrUn_random 417910 43 - 171761319 ACTTTAATACCACTTTTTTTGATCCTGCTGGAGGGGGAGATCC
|
|
1060
|
+
i tetNig1.chrUn_random C 0 N 0
|
|
1061
|
+
s danRer4.chrM 7064 43 + 16596 ATCTTAACACAACGTTCTTTGACCCGGCAGGAGGGGGAGATCC
|
|
1062
|
+
i danRer4.chrM C 0 C 0
|
|
1063
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
1064
|
+
|
|
1065
|
+
a score=238157.000000
|
|
1066
|
+
s mm8.chrM 6010 38 + 16299 AATTCTCTACCAGCATCTGTTCTGATTCTTTGGGCACC
|
|
1067
|
+
s galGal2.chrM 7327 38 + 16775 AATCCTATACCAACACCTATTCTGATTCTTCGGTCACC
|
|
1068
|
+
i galGal2.chrM C 0 C 0
|
|
1069
|
+
s monDom4.chrUn 117157509 38 + 174229318 CATCCTTTATCAGCACCTGTTTTGATTTTTTGGTCACC
|
|
1070
|
+
i monDom4.chrUn C 0 C 0
|
|
1071
|
+
s echTel1.scaffold_181343 5426 38 + 18297 TATTCTATATCAACACTTATTCTGATTCTTCGGCCATC
|
|
1072
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1073
|
+
s loxAfr1.scaffold_36650 9018 38 + 16266 AATTCTATATCAACACCTATTCTGGTTTTTTGGACACC
|
|
1074
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1075
|
+
s dasNov1.scaffold_23239 9834 38 - 16977 AATTCTCTATCAACATCTATTCTGATTCTTTGGACACC
|
|
1076
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1077
|
+
s canFam2.chrM 6031 38 + 16727 TATCCTATATCAACACCTATTCTGATTCTTCGGACATC
|
|
1078
|
+
i canFam2.chrM C 0 C 0
|
|
1079
|
+
s bosTau2.chrM 6369 38 + 16338 TATTCTATATCAACACTTATTCTGATTCTTTGGACACC
|
|
1080
|
+
i bosTau2.chrM C 0 C 0
|
|
1081
|
+
s rheMac2.chr15 38001555 38 - 110119387 TATCGTGTATCAACATTTATTCTGATTCTTTAGTCACC
|
|
1082
|
+
i rheMac2.chr15 C 0 C 0
|
|
1083
|
+
s panTro2.chrM 6003 38 + 16554 TATTCTATATCAACACTTATTCTGATTTTTTGGCCACC
|
|
1084
|
+
i panTro2.chrM C 0 C 0
|
|
1085
|
+
s hg18.chrM 6587 38 + 16571 CATTCTATACCAACACCTATTCTGATTTTTCGGTCACC
|
|
1086
|
+
i hg18.chrM C 0 C 0
|
|
1087
|
+
s oryCun1.scaffold_140182 6172 38 + 20791 TATCCTCTACCAACACCTATTCTGATTTTTCGGGCACC
|
|
1088
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1089
|
+
s rn4.chrM 5991 38 + 16300 AATTCTTTATCAACACCTATTCTGATTCTTCGGCCACC
|
|
1090
|
+
i rn4.chrM C 0 C 0
|
|
1091
|
+
s danRer4.chrM 7107 38 + 16596 AATTCTTTATCAACACTTATTTTGATTCTTTGGCCACC
|
|
1092
|
+
i danRer4.chrM C 0 C 0
|
|
1093
|
+
e xenTro2.scaffold_96 2673319 6355 - 2855184 I
|
|
1094
|
+
|
|
1095
|
+
a score=2355067.000000
|
|
1096
|
+
s mm8.chrM 6048 371 + 16299 CAGAAGTTTATATTCTTATCCTCCCAGGATTTGGAATTATTTCACATGTAGTTACTTACTACTCCGGAAAAAAAGAACCTTTCGGCTATATAGGAATAGTATGAGCAATAATGTCTATTGG-CTTTCTAGGCTTTATTGTATGAGCCCACCACATATTCACAGTAGGATTAGATGTAGACACACGAGCTTACTTTACATCAGCCACTATAATTATCGCAATTCCTACCGGTGTCAAAGTATTTAGCTGACTTGCAACCCTACACGGAGGTAATATTAAATGATCTCCAGCTATACTATGAGCCTTAGGCTTTATTTTCTTATTTACAGTTGGTGGTCTAACCGGAATTGTTTTATCCAACTCATCCCTTGAC
|
|
1097
|
+
s rn4.chrM 6029 371 + 16300 CAGAAGTGTACATCTTAATTCTTCCAGGGTTTGGAATTATTTCACATGTAGTTACCTATTACTCTGGAAAAAAAGAACCCTTCGGATATATAGGTATGGTATGAACCATAATATCTATTGG-CTTCCTAGGATTTATTGTATGAGCACATCACATATTCACAGTAGGCCTAGATGTAGACACCCGAGCCTACTTTACATCTGCCACTATAATTATCGCAATTCCTACAGGCGTAAAAGTATTCAGCTGACTCGCTACACTACATGGAGGAAATATCAAATGATCCCCCGCCATATTATGAGCCTTAGGGTTTATCTTCTTATTCACAGTAGGGGGCCTAACAGGGATCGTACTATCTAACTCATCCCTTGAC
|
|
1098
|
+
i rn4.chrM C 0 C 0
|
|
1099
|
+
s oryCun1.scaffold_140182 6210 371 + 20791 CCGAAGTATATATTCTTATTCTTCCAGGATTTGGAATAATTTCGCACATTGTGACATACTATTCCGGGAAAAAAGAGCCATTTGGCTATATAGGAATAGTATGAGCTATAATATCAATTGG-TTTCCTTGGATTTATCGTATGGGCCCATCATATATTTACAGTAGGAATAGATGTAGACACACGAGCCTACTTTACATCAGCTACCATAATCATCGCTATCCCTACTGGAGTCAAAGTATTTAGCTGGCTAGCAACACTGCATGGCGGCAACATCAAATGATCCCCCGCTATGCTCTGAGCTCTAGGCTTTATTTTCCTATTTACAGTAGGCGGTCTTACAGGAATTGTGCTAGCCAACTCCTCTTTAGAC
|
|
1100
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1101
|
+
s hg18.chrM 6625 371 + 16571 CTGAAGTTTATATTCTTATCCTACCAGGCTTCGGAATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTTGGATACATAGGTATGGTCTGAGCTATGATATCAATTGG-CTTCCTAGGGTTTATCGTGTGAGCACACCATATATTTACAGTAGGAATAGACGTAGACACACGAGCATATTTCACCTCCGCTACCATAATCATCGCTATCCCCACCGGCGTCAAAGTATTTAGCTGACTCGCCACACTCCACGGAAGCAATATGAAATGATCTGCTGCAGTGCTCTGAGCCCTAGGATTCATCTTTCTTTTCACCGTAGGTGGCCTGACTGGCATTGTATTAGCAAACTCATCACTAGAC
|
|
1102
|
+
i hg18.chrM C 0 C 0
|
|
1103
|
+
s panTro2.chrM 6041 371 + 16554 CCGAAGTTTATATTCTTATCCTACCAGGCTTCGGAATAATTTCCCACATTGTAACTTATTACTCCGGAAAAAAAGAACCATTTGGATATATAGGCATGGTTTGAGCTATAATATCAATTGG-CTTCCTAGGGTTTATCGTGTGAGCACACCATATATTTACAGTAGGGATAGACGTAGACACCCGAGCCTATTTCACCTCCGCTACCATAATCATTGCTATTCCTACCGGCGTCAAAGTATTCAGCTGACTCGCTACACTTCACGGAAGCAATATGAAATGATCTGCCGCAGTACTCTGAGCCCTAGGGTTTATCTTTCTCTTCACCGTAGGTGGCCTAACCGGCATTGTACTAGCAAACTCATCATTAGAC
|
|
1104
|
+
i panTro2.chrM C 0 C 0
|
|
1105
|
+
s rheMac2.chr15 38001593 371 - 110119387 CTGAAGTTTGTTTCCTTATTCTATCAGTATTTGGGATGATCTCCCATATCGTGATGTATTGCTCTGGATAAAAGGAGCCATTTGGGTATATGGGCATAGTATGAGCCATAATATCTATTGG-CTTCTTAGGGTTTATCGTATGAGCACACCATATATTTACAGTAGGATCAGACGTAGACACATGAGCATACTTCACCTCTGCTACCATAATTATTGCTATCCCTACTGGTGTCAAGGTCTTTAGCTGATTAGCTACACTGCACAGCAGTAGCATCAAATGATCTCCTGCAATGTTCTGAACCCTAGGATTCATCTTCCTTTTCACAGTAGGAGGTCTCACTGGCATTGTACTAGCTAATTCATCACTAGAT
|
|
1106
|
+
i rheMac2.chr15 C 0 C 0
|
|
1107
|
+
s bosTau2.chrM 6407 371 + 16338 CCGAAGTCTATATTTTAATCTTACCTGGGTTTGGAATAATCTCTCATATCGTGACCTACTACTCAGGAAAAAAAGAACCATTCGGATATATGGGAATAGTTTGGGCTATAATGTCAATCGG-ATTTCTAGGTTTCATCGTATGAGCCCACCATATATTCACTGTCGGAATAGACGTCGACACACGAGCCTACTTCACATCAGCCACTATAATTATTGCTATTCCAACCGGGGTAAAAGTCTTCAGCTGATTGGCAACACTTCATGGAGGTAATATCAAATGGTCTCCTGCTATAATGTGAGCCCTAGGCTTTATTTTCTTATTTACAGTAGGGGGTTTAACTGGAATTGTCTTAGCCAACTCTTCCCTCGAT
|
|
1108
|
+
i bosTau2.chrM C 0 C 0
|
|
1109
|
+
s canFam2.chrM 6069 371 + 16727 CTGAAGTTTACATTCTTATCCTGCCCGGATTCGGAATAATTTCTCACATTGTCACTTACTACTCAGGGAAAAAAGAGCCTTTCGGTTATATAGGAATAGTATGAGCAATAATATCTATTGG-GTTTTTAGGCTTTATCGTATGAGCTCACCATATGTTTACCGTAGGAATAGATGTAGACACACGAGCGTACTTTACGTCCGCCACTATAATTATCGCTATTCCAACGGGAGTAAAAGTATTTAGTTGACTGGCAACACTTCATGGAGGCAATATTAAATGATCTCCAGCTATGCTATGAGCTTTAGGGTTTATTTTCTTATTTACAGTAGGCGGGTTAACAGGTATTGTCCTAGCTAATTCGTCCTTAGAC
|
|
1110
|
+
i canFam2.chrM C 0 C 0
|
|
1111
|
+
s dasNov1.scaffold_23239 9872 371 - 16977 CTGAAGTCTACATCCTCATCTTACCAGGGTTCGGTATAATTTCACACATCGTCACATATTATTCAGGAAAAAAAGAACCATTCGGCTATATGGGCATAGTTTGAGCCATGATATCCATTGG-CTTCTTAGGGTTCATTGTATGAGCTCATCACATATTCACAGTAGGAATGGACGTAGATACACGAGCCTATTTCACATCAGCCACAATAATTATCGCTATTCCAACAGGGGTCAAAGTGTTTAGCTGACTAGCTACCCTGCATGGCGGCAACATCAAATGATCCCCAGCAATACTCTGAGCCTTAGGATTTATTTTCTTGTTCACAGTAGGGGGCCTCACAGGAATCGTACTAGCCAACTCATCCCTAGAC
|
|
1112
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1113
|
+
s loxAfr1.scaffold_36650 9056 371 + 16266 CTGAAGTCTATATTCTAATTCTCCCAGGATTTGGAATAGTTTCTCATATCGTTACATACTACTCAGGAAAAAAAGAACCCTTCGGTTATATAGGGATAGTATGGGCTATAATATCAATTGG-CTTCCTAGGATTTATTGTATGAGCCCACCATATATTCACCGTAGGCATAGACGTTGACACTCGAGCTTACTTTACATCAGCTACTATAATTATTGCTATTCCAACTGGCGTAAAAGTCTTTAGTTGACTAGCTACCCTTCATGGCGGTAATATTAAATGATCCCCCGCTATAATATGAGCTCTAGGATTTATCTTCTTGTTTACAATTGGAGGATTAACTGGCATTGTTCTTGCTAATTCTTCACTAGAC
|
|
1114
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1115
|
+
s echTel1.scaffold_181343 5464 372 + 18297 CAGAGGTCTATATTCTGATTCTTCCAGGGTTTGGTATAATTTCTCATATCGTTACCTATTATTCAGGAAAAAAAGAACCATTCGGGTATATAGGAATAGTATGGGCCATAATATCAATCGGTTTTCTTAGGATTCATCGTCTGGGCTCATCATATATTTACTGTTGGTATAGACGTTGATACCCGAGCATACTTTACATCTGCAACTATAATTATTGCAATTCCTACAGGAGTAAAAGTGTTCAGCTGATTAGCTACACTTCACGGAGGTGACATTAAATGGAGCCCCGCTATAATATGGGCCCTAGGCTTCATCTTTCTGTTTACAGTTGGAGGCCTTACTGGTATTATTCTTGCTAACTCATCTCTAGAT
|
|
1116
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1117
|
+
s monDom4.chrUn 117157547 371 + 174229318 CAGAAGTTTATATTCTTATTCTCCCAGGATTTGGGATCATCTCGCACATTGTTACATATTATTCAGGTAAAAAAGAGCCTTTTGGCTATATAGGAATAGTGTGGGCTATAATATCTATTGG-GTTTTTAGGTTTTATTGTATGAGCCCATCATATATTTACTGTAGGACTAGACGTTGATACTCGAGCATATTTTACTTCCGCAACAATAATTATTGCTATCCCAACAGGAGTGAAAGTATTTAGCTGGTTAGCCACACTACACGGAGGTAACATTAAGTGATCCCCAGCAATACTATGAGCCTTAGGCTTTATTTTCTTATTTACAATTGGAGGTTTAACAGGTATTGTTTTAGCCAACTCCTCACTAGAC
|
|
1118
|
+
i monDom4.chrUn C 0 C 0
|
|
1119
|
+
s galGal2.chrM 7365 371 + 16775 CCGAAGTTTACATCCTCATCCTCCCAGGTTTCGGAATAATTTCCCACGTAGTAGCATACTATGCAGGAAAAAAAGAACCATTCGGATACATAGGAATAGTCTGAGCCATACTGTCAATCGG-ATTCCTTGGCTTCATTGTATGAGCCCACCATATATTCACAGTCCGAATGGACGTAGACACCCGAGCCTACTTTACATCAGCCACAATAATCATCGCCATCCCAACTGGTATTAAAGTCTTCAGCTGACTAGCAACCCTGCACGGAGGAACAATTAAATGAGACCCCCCTATGCTATGAGCCCTAGGATTCATCTTCCTCTTCACTATCGGAGGCCTAACGGGAATCGTCCTTGCTAACTCATCACTAGAT
|
|
1120
|
+
i galGal2.chrM C 0 C 0
|
|
1121
|
+
s xenTro2.scaffold_43 2619821 371 + 3852807 CAGAAGTCTACATTCTAATCCTTCCAGGATTTGGTATGATCTCGCACATTGTGACCTACTACTCAGGGAAAAAAGAGCCCTTCGGATACATAGGAATAGTCTGAGCAATGATATCCATTGG-ACTCTTAGGTTTTATTGTATGAGCCCACCACATATTTACAGTAGACTTAAATGTTGATACCCGAGCCTACTTCACCTCAGCAACAATAATTATCGCAATCCCAACAGGGGTTAAAGTATTTAGCTGACTAGCTACAATGCATGGAGGAACAATCAAATGAGACGCCCCAATGCTTTGAGCCCTTGGCTTTATTTTCCTATTTACTGTAGGCGGACTAACAGGGATCGTCCTTGCCAACTCTTCTTTAGAC
|
|
1122
|
+
i xenTro2.scaffold_43 n 6355 C 0
|
|
1123
|
+
s danRer4.chrM 7145 371 + 16596 CAGAAGTCTACATTCTTATTTTACCAGGATTCGGCATTATCTCCCATGTTGTAGCATACTACGCAGGGAAAAAAGAACCATTCGGGTATATAGGAATAGTATGAGCTATAATGGCTATTGG-TCTCTTAGGTTTTATTGTATGAGCCCATCACATATTCACTGTAGGAATGGATGTAGACACCCGAGCATACTTCACATCCGCCACAATGATTATTGCTATTCCAACTGGTGTAAAAGTATTTAGCTGATTAGCCACTCTCCACGGAGGAGCTATTAAATGAGAAACCCCTATACTATGGGCACTAGGATTTATTTTCTTATTTACAGTAGGAGGGTTAACCGGAATCGTTTTAGCCAACTCATCATTAGAC
|
|
1124
|
+
i danRer4.chrM C 0 C 0
|
|
1125
|
+
|
|
1126
|
+
a score=2704170.000000
|
|
1127
|
+
s mm8.chrM 6419 451 + 16299 ATCGTGCTTCACGATACATACTATGTAGTAGCCCATTTCCACTATGTTCTATCAATGGGAGCAGTGTTTGCTATCATAGCAGGATTTGTTCACTGATTCCCATTATTTTCAGGCTTCACCCTAGATGACACATGAGCAAAAGCCCACTTCGCCATCATATTCGTAGGAGTAAACATAACATTCTTCCCTCAACATTTCCTGGGCCTTTCAGGAATACCACGACGCTACTCAGACTACCCAGATGCTTACACCACATGAAACACTGTCTCTTCTATAGGATCATTTATTTCACTAACAGCTGTTCTCATCATGATCTTTATAATTTGAGAGGCCTTTGCTTCAAAACGAGAAGTAATATCAGTATCGTATGCTTCAACAAATTTAGAATGACTTCATGGCTGCCCTCCACCATATCACACATTCGAGGAACCAACCTATGTAAAAG--TAAAAt
|
|
1128
|
+
s rn4.chrM 6400 451 + 16300 ATTGTACTTCATGATACATACTACGTAGTAGCTCACTTCCACTATGTCTTATCTATAGGAGCAGTATTCGCCATCATAGCTGGCTTCGTCCACTGATTCCCACTATTCTCAGGCTATACCCTAAATGACACATGAGCAAAAGCCCACTTTGCCATTATATTTGTAGGTGTAAACATAACATTTTTTCCTCAACACTTCCTAGGATTAGCAGGGATACCTCGTCGTTACTCTGATTATCCAGATGCTTATACCACATGAAATACAGTCTCCTCTATAGGCTCATTCATCTCACTTACGGCCGTCCTTGTAATGATCTTCATGATTTGAGAAGCCTTCGCATCAAAACGAGAAGTGCTCTCAATTTCCTACTCTTCAACTAACCTAGAATGACTGCATGGATGCCCCCCACCTTACCACACATTCGAAGAACCTTCCTATGTAAAAG--TTAAAt
|
|
1129
|
+
i rn4.chrM C 0 C 0
|
|
1130
|
+
s oryCun1.scaffold_140182 6581 453 + 20791 ATCGTACTACATGACACCTACTATGTAGTAGCTCACTTCCACTATGTCCTATCTATGGGGGCTGTATTTGCTATTATAGGAGGATTTGCCCATTGATTCCCCCTATTCTCAGGCTATACCCTTGACCCAACCTGAGCTAAAATTCACTTCACTGTGATATTTGTAGGAGTCAACTTAACCTTCTTCCCTCAACATTTCCTTGGCCTCTCAGGTATACCCCGACGGTACTCAGACTACCCGGACGCCTATACAATATGAAATACTGTTTCATCAATAGGCTCATTCATTTCCCTAACTGCCGTAATAGTAATAATTTTTATAATCTGAGAAGCCTTCGCCTCAAAACGAGAAGTAGAGACTATTGAACTAACCACCACAAACCTAGAATGACTTCATGGATGCCCTCCCCCATACCATACATTTGAAGAACCCGCTTTCGTAAAAGCTTAGTAC
|
|
1131
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1132
|
+
s hg18.chrM 6996 444 + 16571 ATCGTACTACACGACACGTACTACGTTGTAGCTCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGGCTTCATTCACTGATTTCCCCTATTCTCAGGCTACACCCTAGACCAAACCTACGCCAAAATCCATTTCACTATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTCGGCCTATCCGGAATGCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAACATCCTATCATCTGTAGGCTCATTCATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACCCTCCATAAACCTGGAGTGACTATATGGATGCCCCCCACCCTACCACACATTCGAAGAACCCGTATACATAAAA---------
|
|
1133
|
+
i hg18.chrM C 0 I 75
|
|
1134
|
+
s panTro2.chrM 6412 444 + 16554 ATCGTGCTACACGACACATACTACGTCGTAGCCCACTTCCACTACGTTCTATCAATAGGAGCTGTATTCGCCATCATAGGAGGCTTCATTCACTGATTCCCCCTATTCTCAGGCTATACCCTAGACCAAACCTATGCCAAAATCCAATTTGCCATCATGTTCATTGGCGTAAACCTAACCTTCTTCCCACAGCACTTCCTTGGCCTATCTGGGATGCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAATGTCCTATCATCCGTAGGCTCATTTATCTCCCTGACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCTTTGCTTCAAAACGAAAAGTCCTAATAGTAGAAGAGCCCTCCGCAAACCTGGAATGACTATATGGATGCCCCCCACCCTACCACACATTCGAAGAACCCGTATACATAAAA---------
|
|
1135
|
+
i panTro2.chrM C 0 I 75
|
|
1136
|
+
s rheMac2.chr15 38001964 444 - 110119387 ATTATTTTACACGATACACACTATGTTGTAGCTCATTTCCACTACATCCTATCAACAGGAGCGGTGTTCGCCATCATAGGAGGCTTTAACCACTGGTTCCCCCTATTCTCAGGTTATACGCTTAATCGGACCTACACTAAAATTCAGTTCACCATTATATTCATAGGTGTTAATTTAACCTTTTTCCCACAGCACTTCCTTGGCCTATCCAGTATGCCTCAACGTTATTCCCATCATCCTGATGCGTATACTGCATGAAATATTATCTCATTCTTAGGCTCATTTATCTCATTAACAGCAGTTATGCTAACAATTTTTATAATCTGAGAAGCCTTTGTTTCTAAAAGAAAAACTATAACAACTGAACAACCATCTACTAATTTAGAGTGACTTTACGGCTGTCCACCATCTTACCACACATTTGAAGAGCCAACCTACATTAAA---------
|
|
1137
|
+
i rheMac2.chr15 C 0 I 9
|
|
1138
|
+
s bosTau2.chrM 6778 451 + 16338 ATTGTTCTTCACGACACATACTACGTTGTCGCACATTTCCACTATGTTTTATCAATAGGAGCTGTATTTGCTATTATAGGGGGATTTGTTCATTGATTCCCACTATTCTCAGGTTATACTCTCAACGATACATGAGCCAAAATCCACTTCGCAATTATATTTGTAGGCGTCAATATAACCTTCTTCCCACAACACTTTCTAGGACTATCTGGCATGCCTCGACGATACTCCGACTACCCAGATGCATACACAATATGAAATACTATCTCATCAATAGGCTCATTCATTTCCCTAACAGCAGTTATACTAATAGTTTTCATCATCTGAGAAGCATTTGCATCTAAACGAGAAGTCTTGACTGTAGACTTAACCACGACAAATCTAGAATGATTAAACGGATGCCCTCCACCATATCACACATTTGAAGAACCCACCTATGTTAAC--CTAAAAt
|
|
1139
|
+
i bosTau2.chrM C 0 C 0
|
|
1140
|
+
s canFam2.chrM 6440 451 + 16727 ATCGTTCTTCATGATACATATTATGTTGTGGCTCATTTTCACTATGTGCTTTCAATAGGAGCAGTTTTTGCCATTATGGGAGGATTTGCCCACTGATTCCCTTTATTCTCAGGTTATACTCTTAACGATACTTGAGCAAAGATTCACTTTACAATTATGTTTGTGGGAGTAAATATAACTTTCTTCCCTCAACATTTCCTAGGTTTATCTGGAATACCTCGTCGATACTCTGACTACCCAGATGCATATACTACCTGAAATACCGTCTCCTCTATAGGATCGTTTATCTCGCTTACAGCGGTGATGCTTATAATTTTTATGATCTGGGAAGCCTTTGCATCCAAACGAGAAGTTGCTATAGTAGAACTTACTACAACTAACATTGAGTGACTACATGGATGTCCCCCTCCATACCACACGTTCGAAGAACCTACATATGTGATC--CAAAAAt
|
|
1141
|
+
i canFam2.chrM C 0 C 0
|
|
1142
|
+
s dasNov1.scaffold_23239 10243 452 - 16977 ATTGTATTACACGACACATACTATGTAGTAGCCCACTTCCACTATGTACTTTCCATAGGAGCCGTATTTGCCATTATAGGAGGCTTTGTCCACTGATTCCCACTATTTTCAGGTTACACCCTAAACTTAACATGAGCTAAAATTCACTTCATTATCATGTTTGTTGGTGTCAACCTAACATTCTTCCCCCAACACTTCCTAGGCCTCTCCGGAATACCACGACGATATTCAGACTACCCTGATGCATACACAATATGAAACACTGTATCATCAATAGGCTCATTTATCTCGCTAACAGCAGTAATACTAATAATTTTCATAATCTGAGAAGCATTTGCATCAAAACGAGAGGTTGATGTAGTAGAATTAACACCAACCAACCTTGAATGACTTCACGGGTGTCCACCACCATACCACACATTCGAAGAACCTGCGTTCGTAAAA-GTTTAACC
|
|
1143
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1144
|
+
s loxAfr1.scaffold_36650 9427 452 + 16266 ATTGTCCTACATGACACCTACTACGTTGTAGCTCACTTTCACTACGTCTTGTCTATAGGTGCAGTTTTCGCCATTATGGGTGGATTTATCCACTGATTTCCACTATTTTCAGGATACACATTAAATTATACATGAGCTAAAATTCAATTCCTAGTTATATTTATTGGTGTTAATTTGACATTTTTTCCCCAACACTTTCTTGGACTATCTGGTATGCCACGTCGATATTCTGACTATCCAGATGCCTATACTGCATGAAATACTGCCTCTTCTATAGGTTCATTTATCTCTTTAGTAGCCGTAATTCTAATAGTCTTTATAATTTGAGAGGCATTTGCTTCTAAGCGCGAAGTTTCTGTGATAGAACTCACAACAACAAACGTAGAATGACTCAACGGATGTCCACCTCCACATCATACATTCGAAGAACCAGCCTACGTAAAA-TCTAACTC
|
|
1145
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1146
|
+
s echTel1.scaffold_181343 5836 451 + 18297 ATTGTTCTTCATGATACCTATTATGTAGTAGCCCATTTTCACTATGTCCTCTCCATAGGAGCAGTATTTGCTATTATAGGGGGGTTCATCCATTGATTCCCCCTATTCACAGGCTATACATTAAGTGAAGCATGAGCTAAAGCCCACTTCATTATTATATTTATTGGGGTAAACTTAACATTTTTCCCTCAACATTTTTTAGGCCTTTCAGGTATGCCACGACGTTATTCGGACTACCCTGATGCCTACACTACCTGGAACTCCGTGTCATCAGTCGGATCTTTTATTTCGCTAACAGCTGTAATCCTCATAATCTTCATAGTATGGGAAGCATTTGCTTCAAAACGAGAAGTTACTTCAGTAAACCTAGTTCATACTAATCTTGAATGAATTCACGGATCTCCTCCCCCCTTTCATACATTTGAAGAACCAGTCTATATAAAA-TCCTAA-C
|
|
1147
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1148
|
+
s monDom4.chrUn 117157918 453 + 174229318 ATTGTACTTCACGACACATACTATGTAGTAGCCCACTTTCACTATGTGTTATCAATAGGAGCCGTATTCGCTATCATAGGGGGTTTCGTCCATTGATTTCCACTATTCACAGGTTATATACTCAATGACCTATGAACAAAAATTCACTTCTTTATCATATTTGTTGGAGTAAACTTAACCTTCTTCCCCCAACACTTTTTAGGACTTGCTGGCATACCACGACGATACTCTGACTACCCAGATGCTTACACTATATGAAATGTTTTATCCTCAATTGGATCATTTATTTCACTAACAGCTGTAATCCTTATAGTTTTTATTATCTGAGAAGCATTTGCATCTAAACGAGAAGTTCTTAATGTAGAATTAACAACAACTAATATTGAATGACTTTACGGATGTCCACCCCCATATCACACATTCGAACAGCCTGTTTTCATTAAAGCCTAGTTt
|
|
1149
|
+
i monDom4.chrUn C 0 C 0
|
|
1150
|
+
s galGal2.chrM 7736 451 + 16775 ATTGCCCTTCATGACACCTACTATGTAGTCGCCCACTTCCACTATGTCCTCTCAATGGGGGCAGTTTTTGCCATTCTAGCAGGATTTACCCACTGATTTCCCCTCTTCACAGGCTTTACCCTACACCCATCATGAACCAAGGCACATTTCGGAGTAATATTTACCGGAGTTAACCTAACCTTTTTCCCCCAACATTTCCTGGGCCTAGCTGGAATACCCCGACGATACTCAGATTACCCAGACGCCTACACACTATGAAACACACTATCCTCAATCGGCTCCTTAATTTCAATAACAGCCGTAATCATACTCATATTCATCGTCTGAGAAGCCTTCTCAGCAAAACGAAAAGTACTCCAACCCGAATTAACTGCCACTAATATCGAATGAATTCATGGCTGCCCACCCCCATACCACACCTTCGAAGAACCAGCCTTTGTACAAGTGCAAG--
|
|
1151
|
+
i galGal2.chrM C 0 I 71
|
|
1152
|
+
s xenTro2.scaffold_43 2620192 436 + 3852807 ATCGTCCTTCACGATACCTATTATGTCGTAGCACACTTCCATTATGTTCTCTCAATAGGAGCAGTATTCGCAATTATAGGAGGCTTTGTTCATTGATTACCGTTATTCACAGGGTACACCCTTCACGAAACATGAGCAAAAATCCACTTCGGCGTTATATTTGCAGGGGTTAACCTAACCTTCTTTCCCCAACACTTCCTAGGATTAGCGGGTATACCTCGACGTTATTCTGATTACCCAGATGCCTACACACTTTGAAACACCGTCTCATCTGTCGGCTCCTTAATTTCCCTAGTGGCGGTAATTATGATGATATTCATTATCTGAGAAGCATTCGCAGCANAACGGGAAGTCACTCTAACAGAACTAACTTCAACAAATATTGAATGACTTCACGGATGCCCTCCCCCTTACCACACATTCGAAGAACCAGCCT-----------------
|
|
1153
|
+
i xenTro2.scaffold_43 C 0 n 0
|
|
1154
|
+
s fr1.chrUn 326222607 451 + 349519338 ATCGTATTACACGACACCTACTACGTAGTTGCCCATTTCCACTACGTCCTCTCCATGGGTGCTGTATTTGCAATTATGGGTGCATTCGTACACTGATTCCCACTATTTTCAGGATACACACTCCACAGCACTTGAACTAAAATCCACTTCGGAGTAATGTTCATTGGTGTCAACCTAACCTTCTTCCCTCAACACTTCCTTGGTCTAGCTGGAATACCTCGACGATACTCCGACTACCCCGACGCCTACGCCCTATGAAACTCCGTCTCCTCAATTGGCTCAATAGTCTCTCTAGTGGCAGTAATTATGTTCCTCTTTATCCTCTGAGAGGCCTTCACCGCTAAGCGAGAAGTCCAATCAGTTGAACTAACAATGACAAATGTAGAATGACTACACGGGTGCCCTCCTCCTTACCACACATTCGAAGAGCCCGCCTTTGTCCAAACTCAAA--
|
|
1155
|
+
i fr1.chrUn N 0 I 9
|
|
1156
|
+
s danRer4.chrM 7516 451 + 16596 ATCGTACTACATGACACATACTACGTAGTAGCACACTTTCACTATGTTCTTTCAATAGGAGCTGTATTCGCTATTATAGCAGGCTTTGTTCACTGATTCCCACTATTTACAGGCTACACCCTAAACAGTGTATGAACAAAAATCCATTTCGGGGTTATATTTATCGGAGTAAATCTCACATTCTTCCCACAACATTTCCTAGGTTTAGCAGGAATACCACGACGGTACTCTGACTACCCAGACGCCTATGCACTCTGAAATACAGTATCTTCTATTGGGTCACTAATTTCTTTAGTAGCAGTAATCATGTTCTTATTTATCTTATGAGAAGCCTTTACCGCCAAACGAGAAGTTCTGTCAGTTGAATTGACCGCAACAAATGTAGAATGATTACACGGCTGCCCTCCCCCCTACCACACATTTGAGGAGCCAGCATTCGTTCAAATTCAAT--
|
|
1157
|
+
i danRer4.chrM C 0 I 79
|
|
1158
|
+
|
|
1159
|
+
a score=206045.000000
|
|
1160
|
+
s mm8.chrM 6870 68 + 16299 aagaaaggaaggaatcgaaccccctaaaattggtttcaagc--------------caatctcatatcctatatgtctttctc--
|
|
1161
|
+
s rn4.chrM 6851 67 + 16300 aagaaaggaaggaatcga-ccccctacaactggtttcaagc--------------caatttcataaccattatgtctttctc--
|
|
1162
|
+
i rn4.chrM C 0 C 0
|
|
1163
|
+
s oryCun1.scaffold_140182 7034 68 + 20791 Aagaaaggaaggaatcgaacctcctaaaactggtttcaagc--------------cagccccatagccactatgactttctT--
|
|
1164
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1165
|
+
s rheMac2.chr15 38002417 67 - 110119387 gaaaaaggaaggaattgaaccttcagaaactggtttcaagc--------------caatc-aataacctctatgactttctc--
|
|
1166
|
+
i rheMac2.chr15 I 9 C 0
|
|
1167
|
+
s bosTau2.chrM 7229 68 + 16338 aagaaaggaaggaatcgaacccccta--------------ctattggtttcaagccaacatcataacctctatgtctctctc--
|
|
1168
|
+
i bosTau2.chrM C 0 I 4
|
|
1169
|
+
s canFam2.chrM 6891 68 + 16727 aagaaaggaaggaatcgaaccccctaaaattggtttcaagc--------------caatgtcataaccattatgtctttctc--
|
|
1170
|
+
i canFam2.chrM C 0 I 4
|
|
1171
|
+
s dasNov1.scaffold_23239 10695 68 - 16977 Aagaaaggaaggaatcgaacccccaaaaactagtttcaagc--------------cagctccataacctctatgactttctc--
|
|
1172
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1173
|
+
s loxAfr1.scaffold_36650 9879 68 + 16266 gagaagggaaggaatcgaacctccaacagttagtttcaagc--------------caactctataacctttatgccttcccC--
|
|
1174
|
+
i loxAfr1.scaffold_36650 C 0 I 6
|
|
1175
|
+
s echTel1.scaffold_181343 6287 67 + 18297 Aagaaaggaaggaatcgaacccccaaaaattagtttcaagc--------------caactccgtaacctctacgactttct---
|
|
1176
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1177
|
+
s monDom4.chrUn 117158371 68 + 174229318 aagaaagggaggaattgaaccccctcagattaatttcaagt--------------caaccccataacctttatgactttctc--
|
|
1178
|
+
i monDom4.chrUn C 0 C 0
|
|
1179
|
+
s fr1.chrUn 326223067 70 + 349519338 GAGAAAGGGAGGAATCGAACCCCCGTAAACTGGTTTCAAGC--------------CAGCTACAAAACCACTCTGTCACTTTCTT
|
|
1180
|
+
i fr1.chrUn I 9 C 0
|
|
1181
|
+
e xenTro2.scaffold_43 2620628 0 + 3852807 I
|
|
1182
|
+
e danRer4.chrM 7967 79 + 16596 I
|
|
1183
|
+
e panTro2.chrM 6856 75 + 16554 I
|
|
1184
|
+
e hg18.chrM 7440 75 + 16571 I
|
|
1185
|
+
e galGal2.chrM 8187 71 + 16775 I
|
|
1186
|
+
|
|
1187
|
+
a score=1505774.000000
|
|
1188
|
+
s mm8.chrM 6938 316 + 16299 -AATAAGATATTAGTAAAA---TCAATTACATAACTTTGTCAAAGTTAAATTATAGATCAATAATCTATATATCTT-----------ATATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGATCACACACTAATAATTGTTTTCCTAATTAGCTCCTTAGTCCTCTATATCATCTCGCTAATATTAACAACAAAACTAACACATACAAGCACAATAGATGCACAAGAAGTTGAAACCATTTGAACTATTCTACCAGCTGT-AATCCTTATCATAATTGCTCTCCCCTCTCT
|
|
1189
|
+
s echTel1.scaffold_181343 6354 314 + 18297 -TACAAGATATTAGTAAAA---T--ATTACCTAGCTTTGTCAGGGCTAAATTACAGGCTAAACCCCTGTATATCTT------------TATGGCATACCCATCCCAATTAGGTTTCCAAGATGCCTCCTCTCCCATCATAGAAGAACTGCTATACTTTCACGACCATGCCCTTATAATTGTTTTCCTAATTAGCTCCCTGGTTCTGTATATCATTCTAGCTATACTCAGTACTAAACTAATACATACTAACACAATAGACGCCCAAGTAATCGAAACTATCTGGACTATCTTACCAGCAGTAAATTCTTGTATTAATCGCCCTACCTTCCTT
|
|
1190
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1191
|
+
s loxAfr1.scaffold_36650 9953 314 + 16266 -CATGAAATTTTAGTAAAA---C-AATTACATAGCCTTGTCAAAGCTAAGCTACAGGTTTAAATCCCGTAAATTTC------------TATGGCCTATCCGTTACAATTGGGGTTCCAAGATGCCACATCTCCTGTTATAGAAGAACTCCTTCACTTCCATGACCACACCCTAATAATCATTTTCCTTATTAGCTCCTTAGTCTTGTATATTATTATGCTTATATTAACTTCTAAGCTAGTCCATACAAATATAATAAACGTCCAAGAGATAGAAATAATCTGAACCATTCTCCCAGCTAT-TATCCTTATCTTAATTGCCCTGCCCTCTTT
|
|
1192
|
+
i loxAfr1.scaffold_36650 I 6 C 0
|
|
1193
|
+
s dasNov1.scaffold_23239 10763 315 - 16977 -AATAAGGTATTAATAAAA---C-AATTATATAACTTTGTCAAAGTTAAATTATAGGTTAAAGCCCTTTATACCTT-----------TTATGCCTTACCCATTACAACTAGGATTCCAAGACGCAACATCACCAATCATAGAAGAACTCCTACATTTCCATGACCACACACTAATAATTGTGTTCCTAATTAGCTCTTTAGTCCTTTACATTATTACCCTGATATTAACAACAAAACTAACCCATACAAGCACAATAGACGCACAAGAAGTAGAAACCGTATGAACAATCTTGCCCGCAGT-TATCCTAATCCTAATTGCACTACCCTCACT
|
|
1194
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1195
|
+
s canFam2.chrM 6963 312 + 16727 -AG-GAGGTATTAGTAAAA---C--ATTACATGACTTTGTCAAAGTTAAATTATAGGTGAAACCCCTATATATCTC------------TATGGCGTACCCATTTCAACTCGGATTACAGGACGCAACCTCCCCTATTATAGAGGAGCTACTTCATTTTCATGACCATACACTAATAATTGTATTCTTAATCAGTTCTTTAGTTCTCTATATCATTTCACTAATATTGACTACAAAATTAACCCATACAAGCACAATAGACGCACAAGAAGTGGAAACAGTATGAACCATTCTACCCGCCAT-TATCCTAATCCTAATCGCTCTACCTTCCCT
|
|
1196
|
+
i canFam2.chrM I 4 C 0
|
|
1197
|
+
s bosTau2.chrM 7301 314 + 16338 -AACGAGGTGTTAGTAAAA---C--ATTATATAATTTTGTCAAAGTTAAGTTACAAGTGAAAGTCCTGTACACCTC-----------ATATGGCATATCCCATACAACTAGGATTCCAAGATGCAACATCACCAATCATAGAAGAACTACTTCACTTTCATGACCACACGCTAATAATTGTCTTCTTAATTAGCTCATTAGTACTTTACATTATTTCACTAATACTAACGACAAAGCTGACCCATACAAGCACGATAGATGCACAAGAAGTAGAGACAATCTGAACCATTCTGCCCGCCAT-CATCTTAATTCTAATTGCTCTTCCTTCTTT
|
|
1198
|
+
i bosTau2.chrM I 4 C 0
|
|
1199
|
+
s rheMac2.chr15 38002484 307 - 110119387 -GATAAGATATTAGTAAAC---T-CATTACATAACTTTGTCAAAGTTAAGTTATAGGCTAA-ATCCTATATGTCTT------------AATGGCTCATCCAGTTCAATTAGGCCTTCAAGATGCTACATCCCCTATCATAAAAGAACCACTCACTTTCCATGACCACGTTCTTATAATTATTTTCCTAATTAGTTCCCTGGTTCTATACATTATTTCTCTAA----TACAACAAAATTAACTCATATTAGCACCACAGATGCCCAAGAAATCGAGACTGTCGGAACTATTTTACCTGCCAT-TGTCTTAATTTTAA--GCCCTTCCATCCCT
|
|
1200
|
+
i rheMac2.chr15 C 0 I 1750
|
|
1201
|
+
s panTro2.chrM 6931 313 + 16554 -AAAAAGATATTAGAAAAA---C-TATTTCATAACTTTGTCAAAGTTAAATTACAGGTTAA-CCCCCGTATATCTT------------AATGGCACATGCAGCGCAAGTAGGTCTACAAGATGCTACTTCCCCTATCATAGAAGAACTTATTATCTTTCACGACCATGCCCTCATAATTATCTTTCTCATCTGCTTTCTAGTCCTATACGCCCTTTTCCTAACACTCACAACAAAACTAACTAATACTAGTATTTCAGACGCCCAGGAAATAGAAACCGTCTGAACTATCCTGCCCGCCAT-CATCCTAGTCCTTATTGCCCTACCATCCCT
|
|
1202
|
+
i panTro2.chrM I 75 C 0
|
|
1203
|
+
s hg18.chrM 7515 313 + 16571 -AAAAAGGTATTAGAAAAA---C-CATTTCATAACTTTGTCAAAGTTAAATTATAGGCTAA-ATCCTATATATCTT------------AATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATTTTCCTTATCTGCTTCCTAGTCCTGTATGCCCTTTTCCTAACACTCACAACAAAACTAACTAATACTAACATCTCAGACGCTCAGGAAATAGAAACCGTCTGAACTATCCTGCCCGCCAT-CATCCTAGTCCTCATCGCCCTCCCATCCCT
|
|
1204
|
+
i hg18.chrM I 75 C 0
|
|
1205
|
+
s oryCun1.scaffold_140182 7102 314 + 20791 -GATAAGATATTAGTAAAA---C-CATTACATAACTTTGTCGAAGTTAATTTATAGGTTCAACTCCTATATATCTT------------TATGGCGTACCCCTTCCAACTGGGCTTTCAGGATGCCTCATCCCCTATTATAGAAGAATTACTTCACTTTCATGACCACACTCTCATAATCGTCTTTCTAATCAGCTCCCTAGTCCTTTATATTATTTCTCTTATATTAACTACAAAGCTCACTCACACAAGCACAATGGACGCTCAAGAGGTAGAGACAATCTGAACCATCCTCCCAGCCAT-TATTCTTATTTTAATTGCGCTGCCCTCCCT
|
|
1206
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1207
|
+
s rn4.chrM 6918 314 + 16300 -AATGAGATATTAGTAAAA---T-AATTACATAACCTTGTCAAGGTTAAGTTATAGACCTA-ATCCTATATATCTT-----------ACATGGCTTACCCATTTCAACTTGGCTTACAAGACGCTACATCACCTATCATAGAAGAACTTACAAACTTTCATGACCACACCCTAATAATTGTATTCCTCATCAGCTCCCTAGTACTTTATATTATTTCACTAATACTAACAACAAAACTAACACACACAAGCACAATAGACGCCCAAGAAGTAGAAACAATTTGAACAATTCTCCCAGCTGT-CATTCTTATTCTAATTGCCCTTCCCTCCCT
|
|
1208
|
+
i rn4.chrM C 0 C 0
|
|
1209
|
+
s fr1.chrUn 326223137 310 + 349519338 C-ATAAGACTCTAGTAAAATGGC-AATTACACTACTTTGTCAAGGTAGAATTGTGGGTTAAACCCCCACGTGTCTTATTAT------TAATGGCACATCCTTCACAACTAGGGTTTCAAGATGCAGCTTCACCAGTAATAGAAGAACTCCTTCACTTCCACGACCATGCTCTAATAATCGTATTCCTTATTAGCACATTAGTACTTTACATTATTGTTGCTATAGTCTCCACCAAACTAACTAACAAGTACATTCTAGACTCTCAAGAGATTGAAATTATCTGAACTATCCTACCAGCTAT-TATTCTTATCCTCATTG-------------
|
|
1210
|
+
i fr1.chrUn C 0 M 131
|
|
1211
|
+
s danRer4.chrM 8046 325 + 16596 --ATAAGACATTAGCAAAA---A-CATTACACCACTTTGTCAAGGTGAAATTACAAGTTAAAACCTTGTATGTCTTAACCTAAATTCTAATGGCACACCCTGCACAACTAGGATTCCAAGACGCAGCATCACCTGTAATAGAAGAACTTTTATGTTTTCACGACCATGCTTTAATAATTGTATTTTTAATCAGCACCTTAGTTCTATACATTATCATCGCAATAGTGTCAACCAAACTAACGAATAAATTTATTCTAGATTCCCAAGAAATCGAAATCGTATGAACAGTCCTTCCGGCCAT-CATTCTTATTTTGATTGCTTTACCATCACT
|
|
1212
|
+
i danRer4.chrM I 79 C 0
|
|
1213
|
+
s monDom4.chrUn 117158439 314 + 174229318 --ACAAGATATTAGTAAAA---T-AATTACATAACTTTGCCATAGTTAAATTACAAGCTCAATTCTTGTATATCTT-----------AAATGCCGTACCCTATACAGACAGGTTTCCAAGATGCCACATCCCCTATTATAGAAGAACTCATATATTTTCATGATCACACATTAATAATTGTGTTCCTAATTAGCTCCCTAGTTCTTTATATTATTATTCTAATGCTAACTACTAAACTAACTCACACAAGCACTATAGATGCTCAAGAAGTAGAAACAATTTGAACTATTATACCAGCAGT-TATTCTAGTTCTAATTGCTCTCCCATCACT
|
|
1214
|
+
i monDom4.chrUn C 0 C 0
|
|
1215
|
+
s galGal2.chrM 8258 311 + 16775 --ATGAGACGTTAGTAAAC---C-AATTACATAGACCTGTCAAGACTAAATCACAGGTGCAAACCCTGTACATCTC-----------ATATGGCCAACCACTCCCAACTAGGCTTTCAAGACGCCTCATCCCCCATCATAGAAGAGCTCGTTGAATTCCACGACCACGCCCTGATAGTCGCACTAGCAATTTGCAGCTTAGTACTCTACCTTCTAACTCTTATACTTATAGAAAAACTATCAT---CAAACACCGTAGATGCCCAAGAAGTTGAACTAATCTGAACCATCCTACCCGCTAT-TGTCCTAGTCCTGCTTGCCCTCCCCTCCCT
|
|
1216
|
+
i galGal2.chrM I 71 C 0
|
|
1217
|
+
e xenTro2.scaffold_43 2620628 0 + 3852807 I
|
|
1218
|
+
|
|
1219
|
+
a score=410417.000000
|
|
1220
|
+
s mm8.chrM 7254 86 + 16299 ACGCATTCTATATATAATAGACGAAATCAACAACCCCGTATTA-ACCGTTAAAACCATAGGGCACCAATGATACTGAAGCTACGAAT
|
|
1221
|
+
s galGal2.chrM 8569 86 + 16775 CCAAATCCTCTACATAATAGACGAAATCGACGAACCTGATCTC-ACCCTAAAAGCCATCGGACACCAATGATACTGAACCTATGAAT
|
|
1222
|
+
i galGal2.chrM C 0 C 0
|
|
1223
|
+
s monDom4.chrUn 117158753 86 + 174229318 ACGAATTCTTTACATAATAGACGAAATTTATAACCCCTATCTT-ACAGTCAAAGCTATAGGACATCAATGATACTGAAGTTATGAAT
|
|
1224
|
+
i monDom4.chrUn C 0 C 0
|
|
1225
|
+
s echTel1.scaffold_181343 6668 86 + 18297 ACGAATTTTATACATAATAGATGAAATTAATGATCCCACTATT-ACAGGTAAAACTCTGGGTCACCAATGATATTGAAGTTACGAAT
|
|
1226
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1227
|
+
s loxAfr1.scaffold_36650 10267 86 + 16266 ACACACTCTGTATATAATAGATGAAATCAATAACCCC-CTATTAACAATCAAGACCATAGGACACCAATGATTCTGGAGTTATGAAT
|
|
1228
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1229
|
+
s dasNov1.scaffold_23239 11078 86 - 16977 ACGAATTTTATATATAATAGACGAAATCAACAACCCACTCCTC-ACCATTAAAGCTATAGGTCACCAGTGATACTGAAGCTATGAAT
|
|
1230
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1231
|
+
s canFam2.chrM 7275 86 + 16727 CCGAATCCTTTATATAATGGACGAAATTAATAACCCCTCTTTA-ACCGTGAAAACAATAGGCCACCAATGATACTGAAGCTATGAAT
|
|
1232
|
+
i canFam2.chrM C 0 C 0
|
|
1233
|
+
s bosTau2.chrM 7615 86 + 16338 ACGAATTCTATACATAATAGATGAAATCAATAACCCATCTCTT-ACAGTAAAAACCATAGGACATCAGTGATACTGAAGCTATGAGT
|
|
1234
|
+
i bosTau2.chrM C 0 C 0
|
|
1235
|
+
s rheMac2.chr5 34442919 77 - 182086969 ATGTATTCTGTAAATAAC---------TAACAACCCTTCTCTT-ACCGCCAAATCAATTGGCCACCAATAATATTGAAGCTATGAAT
|
|
1236
|
+
i rheMac2.chr5 M 981 C 0
|
|
1237
|
+
s panTro2.chrM 7244 86 + 16554 GCGTATCCTTTACATAACAGACGAGGTCAACGACCCCTCCTTT-ACTATTAAATCAATCGGCCATCAATGATATTGAACCTACGAAT
|
|
1238
|
+
i panTro2.chrM C 0 C 0
|
|
1239
|
+
s hg18.chrM 7828 86 + 16571 ACGCATCCTTTACATAACAGACGAGGTCAACGATCCCTCCCTT-ACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACGAGT
|
|
1240
|
+
i hg18.chrM C 0 C 0
|
|
1241
|
+
s oryCun1.scaffold_140182 7416 86 + 20791 ACGAATCCTATATATAATAGATGAAATCAACAACCCCTCTTTA-ACAGTAAAAACGATAGGCCACCAATGATATTGAAGCTATGAGT
|
|
1242
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1243
|
+
s rn4.chrM 7232 86 + 16300 ACGAATTCTATACATAATAGACGAGATTAATAACCCAGTTCTA-ACAGTAAAAACTATAGGACACCAATGATACTGAAGCTATGAAT
|
|
1244
|
+
i rn4.chrM C 0 C 0
|
|
1245
|
+
s danRer4.chrM 8371 86 + 16596 TCGAATTTTATACCTTATAGATGAAATTAATGACCCCCACGTT-ACTATTAAAGCCGTAGGACATCAATGGTACTGAAGCTACGAAT
|
|
1246
|
+
i danRer4.chrM C 0 C 0
|
|
1247
|
+
e xenTro2.scaffold_43 2620628 0 + 3852807 I
|
|
1248
|
+
e fr1.chrUn 326223447 131 + 349519338 M
|
|
1249
|
+
|
|
1250
|
+
a score=450960.000000
|
|
1251
|
+
s mm8.chrM 7340 102 + 16299 ATACTGACTATGAAGACCTATGCTTTGATTCATATATAATCCCAACAAACGACCTAAAACCTGGTGAACTACGACTGCTAGAAGTTGATAACCGAGTCGTTC
|
|
1252
|
+
s galGal2.chrM 8655 102 + 16775 ACACAGACTTCAAGGACCTCTCATTTGACTCCTACATAACCCCAACAACAGACCTCCCCCTAGGCCACTTCCGCCTACTAGAAGTCGACCATCGCATTGTAA
|
|
1253
|
+
i galGal2.chrM C 0 C 0
|
|
1254
|
+
s monDom4.chrUn 117158839 102 + 174229318 ACACCGACTATGAAAATTTGACATTTGATTCCTATATGGTTCCTACCCAAGACCTTATACCAGGACAACTTCGACTGTTAGAAGTAGATAATCGAGTTGTCC
|
|
1255
|
+
i monDom4.chrUn C 0 C 0
|
|
1256
|
+
s echTel1.scaffold_181343 6754 102 + 18297 ATACAGACTATGAAGACCTAGTATTTGACTCATACATAGTCCCCTCTGAGGAATTAAAGCCTGGGGACCTGCGACTTCTTGAAGTAGACAACCGAGTTGTTT
|
|
1257
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1258
|
+
s loxAfr1.scaffold_36650 10353 102 + 16266 ATACTGATTACGAAGATTTAGCTTTCGACTCATACATAATCACTACTGATAGCCTAAAATTTGGAGAACTTCGATTATTAGAGGTAGACAATCGGATGGTAT
|
|
1259
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1260
|
+
s dasNov1.scaffold_23239 11164 102 - 16977 ACACAGATTATGAAGACCTAAATTTTGACTCCTATATAGTCCCAACATCAGACCTCAAACCAGGAGAACTACGACTATTAGAAGTCGATAATCGACTTGTTC
|
|
1261
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1262
|
+
s canFam2.chrM 7361 102 + 16727 ATACTGACTATGAAGACTTAAACTTTGACTCCTACATAATCCCAACACAAGAATTAAAGCCAGGAGAACTCCGACTATTAGAAGTAGACAACCGAGTTGTCC
|
|
1263
|
+
i canFam2.chrM C 0 C 0
|
|
1264
|
+
s bosTau2.chrM 7701 102 + 16338 ATACAGATTATGAGGACTTAAGCTTCGACTCCTACATAATTCCAACATCAGAATTAAAGCCAGGGGAGCTACGACTATTAGAAGTCGATAATCGAGTTGTAC
|
|
1265
|
+
i bosTau2.chrM C 0 C 0
|
|
1266
|
+
s rheMac2.chr5 34442996 102 - 182086969 GTACAGACTGTGAAGAATTAAGCTTCGATTCTTATATAATTCCAACAGCAGACTTAAAGCCAGGAGAACTTCAACTCCTCGAAGTTGATAACCAAACAATTC
|
|
1267
|
+
i rheMac2.chr5 C 0 C 0
|
|
1268
|
+
s panTro2.chrM 7330 102 + 16554 ACACCGACTACGGCGGGCTAATCTTCAACTCCTACATACTCCCCCCATTATTTCTAGAACCAGGTGATCTACGACTCCTTGACGTTGATAACCGAGTGGTCC
|
|
1269
|
+
i panTro2.chrM C 0 C 0
|
|
1270
|
+
s hg18.chrM 7914 102 + 16571 ACACCGACTACGGCGGACTAATCTTCAACTCCTACATACTTCCCCCATTATTCCTAGAACCAGGCGACCTGCGACTCCTTGACGTTGACAATCGAGTAGTAC
|
|
1271
|
+
i hg18.chrM C 0 C 0
|
|
1272
|
+
s oryCun1.scaffold_140182 7502 102 + 20791 ACACAGACTATGAGGATTTAAATTTTGATTCTTATATGATCCCAACATCAGACCTGAATCCAGGTGACCTACGACTACTAGAAGTTGACAATCGAGTTGTAC
|
|
1273
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1274
|
+
s rn4.chrM 7318 102 + 16300 ATACTGACTATGAAGACCTATGCTTTGACTCCTACATAATCCCAACCAATGACCTAAAACCAGGTGAACTTCGTCTATTAGAAGTTGATAATCGGGTAGTCT
|
|
1275
|
+
i rn4.chrM C 0 C 0
|
|
1276
|
+
s fr1.chrUn 326223582 100 + 349519338 ATACAGACTATAGCGA-CTAGCCTTTGACTCATATATAGT-CCCACACAAGACCTGGCCCCCGGCCAATTCCGCCTTTTAGAAACTGACCATCGAATGGTCG
|
|
1277
|
+
i fr1.chrUn M 131 C 0
|
|
1278
|
+
s danRer4.chrM 8457 102 + 16596 ATACAGACTACGAAAACCTAGAATTTGACTCTTATATAGTACCAACCCAAGACCTCACACCAGGGGGCTTTCGGCTTCTTGAAACAGACCATCGAATAGTAG
|
|
1279
|
+
i danRer4.chrM C 0 C 0
|
|
1280
|
+
e xenTro2.scaffold_43 2620628 0 + 3852807 I
|
|
1281
|
+
|
|
1282
|
+
a score=1442452.000000
|
|
1283
|
+
s mm8.chrM 7442 469 + 16299 TGCCAATAGAACTTCCAATCCGTATATTAATTTCATCTGAAGACGTCCTCCACTCATGAGCAGTCCCCTCCCTAGGACTTAAAACTGATGCCATCCCAGGCCGACTAAATCAAGCAACAGTAACATCAAACCGACCAGGGTTATTCTATGGCCAATGCTCTGAAATTTGTGGATCTAACCATAGCTTTATGCCCATTGTCCTAGAAATGGTTCCACTAAAATATTTCGAAAACTGATCTGCTTCAAT---AATTTAA--------------TT-----------------------TCACTATGAAGCTAAG--------AGCGTTAACCTTT--TAAGTTAAAGTTAGAGACCTTAAAA----TCTCCAT-AGTGATATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAATAATTACCCTATTTATCTTATTTCAACTAAAA-GTCTCA--TCACAAACATTC---CCA-CTG----GCACCTTCA-----------------CCAAAATCA-CTAA--CAACCATAAAA--------GTAAAAAC
|
|
1284
|
+
s rn4.chrM 7420 468 + 16300 TACCAATAGAACTTCCAATTCGTATACTAATCTCATCCGAAGACGTCCTGCACTCATGAGCCATCCCTTCACTAGGGTTAAAAACCGACGCAATCCCCGGCCGCCTAAACCAAGCTACAGTCACATCAAACCGACCAGGTCTATTCTATGGCCAATGCTCTGAAATTTGCGGCTCAAATCACAGCTTCATACCCATTGTACTAGAAATAGTGCCTCTAAAATATTTCGAAAACTGATCAGCTTCTAT---AATTTAA--------------AC-----------------------TCATTGCGAAGCTTAG--------AGCGTTAACCTTT--TAAGTTAAAGTTAGAGACAACAAA-----TCTCCAC-AATGACATGCCACAACTAGACACATCCACATGATTTATTACAATCATCTCCTCAATAGCCACACTATTTATTTTATTTCAATTAAAA-ATTTCT--TCCCAAACCTTT---CCT-GCA----CCTCCCTCA-----------------CCCAAAACT-ATAG--CCACAGAAAAA--------ACGAATAA
|
|
1285
|
+
i rn4.chrM C 0 C 0
|
|
1286
|
+
s oryCun1.scaffold_140182 7604 473 + 20791 TTCCCATAGAACTCCCAATCCGCATGCTAATCTCCTCGGAAGACGTACTTCACTCATGAGCCGTACCATCACTAGGACTAAAAACAGATGCCATTCCCGGACGCTTAAATCAAGCCACACTTATCTCAACTCGACCAGGACTTTTCTATGGTCAGTGCTCAGAAATTTGTGGCTCAAACCATAGCTTTATACCTATTGTCCTCGAAATAGTTCCACTTAAACACTTCGAAAACTGATCCCTATCTAT---GATTTAG--------------AC-----------------------TCGCTATGAAGCTAAAC-------AGCGCTAGCCTTT--TAAGCTAGAGAGTGAGAGTTAAATG-GTCTCTCCAT-AGTGAAATGCCACAACTTGACACATCCACATGATTTACTACCATTGTCGCCATAATTCTTTCACTATTTATCCTAATACAACTCAAA-TTCCAC--AAATACACATAC---CCT-ATG----AACCCAGTA-----------------CTAAAATCA-CTTG--AGTTTACTTCA--------TTCCCTTG
|
|
1287
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1288
|
+
s hg18.chrM 8016 496 + 16571 TCCCGATTGAAGCCCCCATTCGTATAATAATTACATCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTAC---CCTATAG--------------CACCCCCTCTACCCC-CTCTAGAGCCCACTGTAAAGCTAACT------TAGCATTAACCTTT--TAAGTTAAAGATTAAGAGAACCAAC-ACCTCTTTAC-AGTGAAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTCATCACCCAACTAAAA-ATATTA--AACACAAACTAC---CAC-CTA----CCTCCCTCA-----------------CCAAAGCCC-ATAA--AAATAAAAAAT--------TATAACAA
|
|
1289
|
+
i hg18.chrM C 0 C 0
|
|
1290
|
+
s panTro2.chrM 7432 497 + 16554 TCCCAGTTGAAGCCCCCGTTCGTATAATAATTACATCACAAGATGTTCTACACTCATGAGCTGTTCCCACATTAGGCCTAAAAACAGACGCAATTCCCGGACGCCTAAACCAAACCACTTTCACCGCCACACGACCAGGAGTATACTACGGCCAATGCTCAGAAATCTGTGGAGCAAACCACAGTTTTATACCCATCGTCCTAGAATTAATCCCTCTAAAAATCTTTGAAATAGGACCCGTATTCAC---TCTATAG--------------CACCTTCTCTACCCCTCTCCAGAGCTCACTGTAAAGCTAACC------TAGCATTAACCTTT--TAAGTTAAAGATTAAGAGGACCGAC-ACCTCTTTAC-AGTGAAATGCCCCAACTAAATACCGCCGTATGACCCACCATAATTACCCCCATACTCCTGACACTATTTCTCGTCACCCAACTAAAA-ATATTA--AATTCAAATTAC---CAT-CTA----CCCCCCTCA-----------------CCAAAACCC-ATAA--AAATAAAAAAC--------TACAATAA
|
|
1291
|
+
i panTro2.chrM C 0 C 0
|
|
1292
|
+
s rheMac2.chr5 34443098 468 - 182086969 TCCCAACAGATATCCCCATCCATATATTAATCTCATCCGAAGACGTCCTGCACTCATGAACTATCCCCTCATTGGGCCTGAAAACAGGTGCAATCCCTGGATGCCTAAATCAAACCACCCTAACTGCTATATGACCAGACCTTTACTATGGACAGTGCTCAGAAATCTTTGGGTCCCACCACAGTGTTATACCTATTGTCCTAGAATTAACACCCTTAAAATGCTTCAAAACCTGATCCACGTCCAC---ACTATAA--------------CA-----------------------TCACTGTAAAGCT-ATC------TAGCATTAATCTTT--TAAGTTAAAGACTGAGGGGATCTAC-ACTTCTCTGC-AGTG-AATGCCTCAACTAGATACTTCCACATGATCCATTGTCATCCTGTCAACAACCATAACTTTATTCTCCATTATTCAGTTAAAA-TTATTA--AATT----TCAT---TAT-ACA----TCTCGTACA-----------------CCAAAAAGA-ATCA--AAATGCAAAAA--------CATAAAGC
|
|
1293
|
+
i rheMac2.chr5 C 0 C 0
|
|
1294
|
+
s bosTau2.chrM 7803 471 + 16338 TACCAATAGAAATAACAATCCGAATGTTAGTCTCCTCTGAAGACGTATTACACTCATGAGCTGTGCCCTCTCTAGGACTAAAAACAGACGCAATCCCAGGCCGTCTAAACCAAACAACCCTTATATCGTCCCGTCCAGGCTTATATTACGGTCAATGCTCAGAAATTTGCGGGTCAAACCACAGTTTCATACCCATTGTCCTTGAGTTAGTCCCACTAAAGTACTTTGAAAAATGATCTGCGTCAAT---ATTATAA--------------AA-----------------------TCACTAAGAAGCTATAT-------AGCACTAACCTTT--TAAGTTAGAGATTGAGAGCCATATA---CTCTCCTT-GGTGACATGCCGCAACTAGACACGTCAACATGACTGACAATGATCTTATCAATATTCTTGACCCTTTTTATCATCTTTCAACTAAAA-GTTTCA--AAACACAACTTT---TAT-CAC----AATCCAGAA-----------------CTGACACCA-ACAA--AAATATTAAAA--------CAAAACAC
|
|
1295
|
+
i bosTau2.chrM C 0 C 0
|
|
1296
|
+
s canFam2.chrM 7463 485 + 16727 TCCCAATAGAAATAACCATCCGAATACTTATCTCTTCAGAAGACGTTTTGCATTCATGAGCCGTTCCATCACTAGGTCTAAAAACTGACGCTATTCCAGGACGACTAAACCAAACCACCCTTATAGCCATACGACCAGGACTGTACTATGGCCAGTGCTCTGAAATCTGCGGATCTAACCACAGCTTTATACCCATTGTTCTTGAAATAGTCCCCCTATCTTACTTTGAGACCTGATCTGCCTTAAT---AGTATAACCTAGACTAGATCTAC-----------------------TCATTAAGAAGCTATAA-------AGCATTAACCTTT--TAAGTTAAAGACTGGGAGTTTTAAC---CTCTCCTT-AATGAAATGCCACAGCTAGATACATCCACCTGATTTATTATAATCTTTTCAATATTTCTCACCCTCTTCATCCTATTTCAACTAAAA-ATTTCA--AATCACTACT-----------------ACCCAGAAAA--------------CCCGATAAC---CAA--ATCTGCTAAAATTGCTGGTCAACATAA
|
|
1297
|
+
i canFam2.chrM C 0 C 0
|
|
1298
|
+
s dasNov1.scaffold_23239 11266 474 - 16977 TACCAATAGAGCTATCAATTCGTATACTAATTTCATCCGAAGATGTACTACACTCATGAGCCGTACCATCCTTAGGACTAAAAACAGACGCAATCCCAGGTCGCCTAAACCAAGCCACATTAATAGCAACACGACCTGGCCTATATTACGGTCAATGCTCAGAAATCTGTGGGTCCAACCACAGCTTCATACCTATTGTACTTGAACTAGTCCCCCTAAAACACTTCGAAGACTGATCTGCCTCAAT---ACTTTAA--------------TC-----------------------TCCTTGAGATGCTATAA------TAGCATTAACCTTT--TAAGTTAAAGACTGAGAGTGCAACAAATCTCTCCTC-AATG-AATGCCTCAACTAGATACATCCACATGATTTATTACAATTGTATCAATGCTACTATCATTATTTATCCTAATACAACTAAAG-TTCATT--AAATTCAGCTCA---TTC-TCA----ACCCCATGT-----------------CCAACAACA-ATAG--AAAAAACAAAA--------CACCTAAC
|
|
1299
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1300
|
+
s loxAfr1.scaffold_36650 10455 469 + 16266 TACCTACAGACCTACCAGTTCGAGTACTAGTCTCATCAGAAGATGTTCTCCATTCATGGGCTGTTCCATCTCTAGGTCTAAAAACAGATGCAATTCCAGGACGACTTAATCAAGTAACTTTAACATCAATACGACCTGGCTTATTTTATGGTCAGTGTTCCGAAATCTGCGGAGCAAACCATAGCTTCATACCAATTGTCCTAGAACTAGTTCCACTTAAATACTTTGAAAACTGGTCAGCATCACT---AGCACAA---------------------------------------TCATTAAGAAGCTATAA------TAGCACTAACCTTT--TAAGTTAGAGTATGAGAACACAGAA---TTCTCCTT-AATGA-ATGGAACGAATAGATA------------TTATTATTTGATTACTAGCAGTCGTAATTGTA---CTTACGACACTAAT-------------AATCTTTCTTCA---TCT-TAA----AACTCTGAAGATCATTCGCCTTCTTTTCCCAATCT-CTAAAGAACTATCCAAGAAGTCA--TGTGTTTT
|
|
1301
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1302
|
+
s echTel1.scaffold_181343 6856 467 + 18297 TACCAATGGAATTGACTATCCGCATATTAATCTCTTCTGAGGATG-TATCCATTCATGAGCAATACCATCACTAGGTCTAAAAACTGACGCAATCCCAGGCCGACTTAATCAAGCTACCTTAACATCAACCCGCCCAGGATTATTTTATGAGCAATGCTCAGAAATCTGTGGCTCAAACCATAGTTTTATACCTATCGTTTTAGAAATAGTACCCTTAAAATTCTTCGAAAGTTGATCAACCTCAAT---AGTCTAG---------------------------------------GCATTAAGAAGCTATTC------AAGCATTAACCTTT--TAAGTTAAAGACAGGGAGCCC--TA---GTCCCCTT-AATGATATGCCACAATTAGATACATCACCCTGACTTATCTCTATCCTATCAATAATATTTACTCTATACCTTCTGATACCTATTAAA-ATCTCCAAAATTTTGGTTAA---TCA-TGATATTAACTCTGAA-------------CCCTCTAAAATTA-CTAA--GCCTACCAA------------------
|
|
1303
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1304
|
+
s monDom4.chrUn 117158941 464 + 174229318 TACCTATAGAACTGCCGATCCGAATGCTAGTCTCTTCAGAAGATGTTCTACATGCATGGGCAGTTCCATCTCTAGGCCTAAAAGCAGATGCTATCCCCGGACGCCTAAACCAAGTCACTCTAACCTCCTCCCGCCCCGGAGTGTTTTACGGCCAATGTTCAGAAATTTGTGGGTCAAACCACAGCTTTATGCCCATTGTCCTAGAAATGACCTCCCTAAAATATTTCGAAAAATGATCC---TCCAT---AATGCAA---------------------------------------GCATATTTAAGCAATT--------AGTCTATACTTTTGGTATGCAAGAGAT-------ATAATA---ATCTCCTTAAATAAAATGCCTCAACTCGACACTTCAACATGAACCTTAACAATTATACTCATAATTATCTCACTATTTTGCATCTATCAGCTTAAA-ATAATG--AATC-AAGTAAT---TAT-CCAAATTACCCCTTCA-----------------AATGAAAAG-AAAA--AAGCTACAAAA--------AGCACCTT
|
|
1305
|
+
i monDom4.chrUn C 0 C 0
|
|
1306
|
+
s galGal2.chrM 8757 467 + 16775 TCCCCATAGAATCCCCCATTCGAGTAATCATCACCGCTGATGACGTCCTCCACTCATGAGCCGTACCCGCCCTCGGGGTAAAAACAGACGCAATCCCTGGACGACTAAATCAAACCTCCTTCATCACCACTCGACCAGGAGTGTTTTACGGACAATGCTCAGAAATCTGCGGAGCTAACCACAGCTACATACCCATTGTAGTAGAGTCTACCCCCCTAAAACACTTTGAAGCCTGATCCTCACTACTGTCATCTTAA---------------------------------------CCATTAAGAAGCTATGCA----CCAGCACTAGCCTTT--TAAGCTAGAGAGAGGGGACACCCTC-----CCCCTT-AATGACATGCCCCAATTAAACCCAAACCCATGATTCTCCATCATACTCCTAACTTGATTCACCTTCTCTCTGCTTATCCAACCCAAACTTCTTT--CATTCACTCTAA---CAA-ACA----ACCCTGCAA-----------------ACAAAATTA-CAAC--AACT---------------AAACCCAC
|
|
1307
|
+
i galGal2.chrM C 0 C 0
|
|
1308
|
+
s xenTro2.scaffold_96 2679674 480 - 2855184 TTCCCATGGAGTCTCCTATTCGGCTCTTAGTGACCGCTGAAGACGTTCTTCACTCCTGAGCTCTCCCATCCTTCGGAGTAAAAACAGATGCTATCCCAGGACGACTTAATCAAACATCATTCATCGCCACTCGACCAGGAGTATTCTACGGACAATGCTCAGAAATTTGCGGAGCTAATCACAGCTTCATACCGATCGTAGTCGAAGCAGTCCCACTAAACGACTTCGAGAACTGATCTTCATCAAT---ACTAGAA--------------GCC----------------------TCACTAAGAAGCTAAACAGGGCCAAGCGACAGCCTTT--TAAGCTGTAGACTGGTGACTCCCAA---CCACCCTT-AGTGATATGCCACAACTAAACCCAGGCCCATGATTCGCTATTCTAATTTTCTCGTGACTAGTTCTTCTTGTCATTATTCCCCCCAAA-ATTCTC--AAACACACATACAGTCAT-ACA----Gacacacac-----------------acacagtcatacag--acacacacata--------cacac---
|
|
1309
|
+
i xenTro2.scaffold_96 I 6355 n 0
|
|
1310
|
+
s fr1.chrUn 326223682 478 + 349519338 TT-CAGTGGACTCCCCCATTCGAATCCTAGTCTCAGCAGAAGATGTCCTCCACTCCTGAGCCGTCCCCTCTCTAGGTGTAAAAATGGATGCCGTACCCGGCCGTCTAAACCAAACAGCCTTTATCCTGTCCCGACCTGGTGTTTTCTACGGCCAATGCTCCGAAATCTGCGGAGCTAACCACAGCTTCATACCAATCGTTGTTGAAGCCGTCCCCCTAGAACACTTTGAAAACTGATCCTCACTAAT---GCTCGAA--------------GATGCC-------------------TCACTAAGAAGCTAAAACGGACACAGCGTTAGCCTTT--TAAGCTAAAAA-TGGTGCCTACCAA---ACACCCTT-AGTGAAATGCCTCAACTCAACCCCGCACCTTGATTCCTCATTATGGTCTTCTCTTGATGTGTATTCCTAATCTTCCTCCCTCCAAAA-ATCATA--GCTCACTTATTC---CCAAATG----AACCCTCCT-----------------CTCAAAACA-CTTG--CCCCAAAGAAA--------TCAAA---
|
|
1311
|
+
i fr1.chrUn C 0 C 0
|
|
1312
|
+
s danRer4.chrM 8559 475 + 16596 TTCCCAAAGAATCACCAATTCGAATTTTAGTTTCAGCTGAAGACGTACTGCACTCTTGAGCTGTTCCATCATTAGGCATTAAAATAGACGCGGTACCCGGACGATTAAACCAAACCGCTTTTATTGTTTCACGTCCAGGTGTATTCTACGGACAATGCTCTGAAATCTGCGGGGCTAACCACAGCTTTATGCCCATTGTAGTCGAAGCCGTCCCACTTGAATTCTTTGAAAACTGATCTTCAGCTAT---ACTAGAA--------------GACGCC-------------------TCACTAAGATGCTAAAATTGG-ATAGCGTTGACCTTT--TAAGTCAAAACTTGGTGCTTACCGA---CCACCCTT-AGTG-AATGCCTCAGCTTAATCCAAAACCCTGATTTATAATCCTTTTTTTCTCATGAGTCATTTTCCTTACTATTATTCCAACCAAA-ATCATT--AATCACATTCAA---CCTAATG----A---CCCAA-----------------CTCAA---G-TTGA--TGCTAAAGAGC--------ACAAAAAT
|
|
1313
|
+
i danRer4.chrM C 0 C 0
|
|
1314
|
+
|
|
1315
|
+
a score=2840419.000000
|
|
1316
|
+
s mm8.chrM 7911 701 + 16299 --CCCTTGAGAATTAAAATGAACGAAAATCTATTTGCCTCATTCAT--TACCCCAACAA-TAATAGGATTCCCAATCGTTGTAGCCATCATTATATTTCCTTCAATCCTATTCCCATCCTC---AA---AACGCCTAATCAACAACCG---TCTCCATTCTTTCCAACACTGACTAGTTAAACTTATTATCAAACAAATAATGCTAATCCACACACCAAAAGGACGAACATGAACCCTAATAATTGTTTCCCTAATCATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCACTATGAGCTGGAGCCGTAATTACAGGCTTCCGACACAAACTAAAAAGCTCACTTGCCCACTTCCTTCCACAAGGAACTCCAATTTCACTAATTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAACATTACTGCAGGACACTTATTAATACACCTA-ATCGGAGGAGCTACTCTAGTATTAATAAATATTAGCCCACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGCAGTAGCATTAATTCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTACATGATAATACATAATGACC
|
|
1317
|
+
s rn4.chrM 7888 701 + 16300 --CCCTTGAGAATCAAAATGAACGAAAATCTATTTGCCTCTTTCAT--TACCCCCACAA-TAATAGGTCTACCAATTGTTGTGACCATTATTATGTTCCCATCAATTCTATTCCCATCATC---AG---AACGCCTAATCAGCAACCG---ACTACACTCATTTCAACACTGACTAATCAAACTTATCATCAAACAAATAATGTTAATTCACACACCAAAAGGACGAACCTGAGCCCTAATAATTGTATCCCTAATTATATTTATTGGCTCAACCAACCTTCTAGGGCTTCTTCCCCATACATTTACCCCTACCACTCAGCTATCTATAGACCTAAGCATAGCCATCCCCCTATGAGCAGGAGCCGTAATTCTAGGTTTCCGACACAAACTAAAAAATTCTTTAGCCCACTTCTCACCGCAAGGAACCCCCATCTCACTAATTCCCATACTAATCATCATCGAAACTATCAGCCTATTTATTCAACCGATAGCACTAGCAGTACGACTAACAGCAAACATTACAGCAGGCCATCTATTAATGCATCTA-ATCGGAGGAGCTACCCTAGTACTTATAGACATCAGCCCACCAACCGCTACAATTACATTTATTATTCTACTTCTACTTACAGTACTTGAATTTGCCGTAGCCTTAATTCAAGCCTATGTATTCACCCTTCTAGTCAGCCTGTACCTACATGATAACACATAATGACC
|
|
1318
|
+
i rn4.chrM C 0 C 0
|
|
1319
|
+
s oryCun1.scaffold_140182 8077 701 + 20791 --CCCATGAGAAACAAAATGAACGAAAATTTATTCTCCTCTTTCGC--TACCCCAACAC-TAATAGGGCTCCCTATTGTAGCCTTAATTATCATATTCCCAACTTTACTATTTCCCTCCCC---TA---GCCGACTAATTAACAACCG---ACTAGTCTCAACCCAACAATGATTAGCCCAACTTATCTTAAAGCAAATAATATTAATACATTCCCCCAAAGGACGAACCTGATCTCTAATATTAATTTCCCTAATCATATTTATTGGCTCAACCAACCTCCTAGGCCTCCTGCCTCACTCATTCACACCAACAACTCAATTATCAATAAATTTAGGGATAGCAATCCCCCTATGAGCAGGAGCCGTAATCACCGGGTTTCGATACAAAACTAAGGCGTCACTAGCCCATTTCCTCCCACAAGGAACCCCTATTCCTCTTATTCCTATGCTAATTGTTATTGAAACTATTAGTCTCTTCATTCAACCTATAGCCCTAGCCGTACGGCTTACAGCCAATATCACAGCAGGCCACCTTCTCATACACCTT-ATTGGAGGCGCTGCACTAGCTTTAGTCTCAATTAGTCCAACAACAGCCCTAATTACCTTTATTATCCTTATTCTACTAACAATTCTAGAATTCGCCGTAGCCTTGATCCAAGCTTACGTCTTTACTCTCCTTGTAAGCCTATACCTACATGACAATACCTAATGACA
|
|
1320
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1321
|
+
s hg18.chrM 8512 701 + 16571 --ACCCTGAGAACCAAAATGAACGAAAATCTGTTCGCTTCATTCAT--TGCCCCCACAA-TCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTC---CA---AATATCTCATCAACAACCG---ACTAATCACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGATAGCCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTA-ATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTCTAGTAAGCCTCTACCTGCACGACAACACATAATGACC
|
|
1322
|
+
i hg18.chrM C 0 C 0
|
|
1323
|
+
s panTro2.chrM 7929 701 + 16554 --ACCCTGAGAACCAAAATGAACGAAAATCTATTCGCTTCATTCGC--TGCCCCCACAA-TCCTAGGCTTACCCGCCGCAGTACTAATCATTCTATTCCCCCCTCTACTGGTCCCCACTTC---TA---AACATCTCATCAACAACCG---ACTAATTACCACCCAACAATGACTAATTCAACTGACCTCAAAACAAATAATAACTATACACAGCACTAAAGGACGAACCTGATCTCTCATACTAGTATCCTTAATCATTTTTATTACCACAACCAATCTTCTTGGGCTTCTACCCCACTCATTCACACCAACCACCCAACTATCTATAAACCTAGCCATGGCTATCCCCCTATGAGCAGGCGCAGTAGTCATAGGCTTTCGCTTTAAGACTAAAAATGCCCTAGCCCACTTCTTACCGCAAGGCACACCTACACCCCTTATCCCCATACTAGTTATCATCGAAACTATTAGCCTACTCATTCAACCAATAGCCTTAGCCGTACGTCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTA-ATTGGAAGCGCCACACTAGCATTATCAACTATCAATCTACCCTATGCACTCATTATCTTCACAATTCTAATCCTACTGACTATTCTAGAGATCGCCGTCGCCTTAATCCAAGCCTACGTTTTTACACTTCTAGTGAGCCTCTACCTGCACGACAACACATAATGACC
|
|
1324
|
+
i panTro2.chrM C 0 C 0
|
|
1325
|
+
s rheMac2.chr5 34443566 700 - 182086969 --CCCCTGAGAATTAAAATTGAAGAAAATCTATTTACCCCTTTTAC--TACCCCAACAA-TTCTAGGCCTACCCACAGTAGTATTAATCATTTTATTTCCCACCCTACTATTTCCAACCTC---CA---ATCATCTAATTAGTAACCA---ATTGGTTTCCATTCAACAGTGACTAATTCAACTTGTACTAAAACAAATAATAAGTACCCATAACATTAAACGAAAAACCTGATCCCTTATACTGATCTCCCTAATTCTCTTCATTGCCTCAACCAATCTCCTCAGGCTTCTACCCCATTCATTTACACCAACTACCCAATTATCAATAAATCTAGGTATAGCAATCCCCTTATGAGCAGGTGCAGTAATTATA-ACTTCCACTTTAAGACGAACACATCCTTAGCTCACTTTTTACCACAAGGCACACCTATACCACTTATCTCTATGCTAGTGATCATTGAAACTACTAGCCTATTCATTCAACTGATGGCATTAGCTATGCAGTTAACAGCCAACATTACAGCCGGACACCTACTAATGCATTTATATTGGAGGAGCTACACTAGTACTATAAACTATCAGTCTTCCCACAGCTCCAATT-TCTTCATTATTCTAATCCTACTGAACATCCTCGAATTCACCGTAGCTCTTATTCAGGCCTATGTCTTCACACTACTTGTAAGCCTTTACCTATATGACAACACATAATGACC
|
|
1326
|
+
i rheMac2.chr5 C 0 C 0
|
|
1327
|
+
s bosTau2.chrM 8274 701 + 16338 --CCCTTGAGAAACAAAATGAACGAAAATTTATTTACCTCTTTTAT--TACCCCTGTAA-TTTTAGGTCTCCCTCTCGTAACCCTTATCGTACTATTCCCAAGCCTACTATTCCCAACATC---AA---ACCGACTAGTAAGCAATCG---CTTTGTAACCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATCCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCTCTGATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACTCCACTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATTCAACCTATAGCCCTCGCCGTGCGGTTAACAGCTAACATCACTGCAGGACACCTATTAATTCACCTA-ATCGGAGGAGCTACACTTGCACTAATAAGCATTAGCACTACAACAGCTCTAATTACATTCACCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACACATAATGACA
|
|
1328
|
+
i bosTau2.chrM C 0 C 0
|
|
1329
|
+
s canFam2.chrM 7948 701 + 16727 --TCCTTGAGAAAACAAATGAACGAAAATCTATTCGCTTCTTTCGC--TGCCCCCTCAA-TAATAGGTCTCCCTATTGTGGTACTGATCGTCATATTCCCTTCCATTTTATTCCCAACACC---CA---GTCGCCTAATCAATAATCG---GTTAATCTCCATTCAGCAATGACTAATTCAACTAACATCAAAACAAATACTAGCAATTCATAACCAAAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTTATTGGCTCAACTAATCTACTTGGACTATTACCTCACTCATTTACGCCCACAACACAACTCTCTATAAACCTCGGAATAGCAATTCCCCTATGAGCAGGGACAGTAATTACCGGTTTCCGCTATAAAACCAAAGCATCCTTAGCACACTTTCTACCCCAAGGCACCCCTCTCCCCCTAATTCCAATACTAGTAGTCATCGAAACTATTAGTCTATTTATTCAACCCATGGCTCTAGCCGTTCGATTAACCGCCAATATTACTGCAGGACACCTCCTAATCCATTTG-ATTGGAGGGGCTACCTTAGCTCTTATCAATATTAGCGCGACCACAGCTTTTATCACTTTTATTATTCTAATCCTACTTACGATCCTAGAATTTGCTGTTGCCTTAATTCAAGCCTATGTTTTTACCTTACTAGTGAGTCTATACTTACATGACAACACCTAATGACC
|
|
1330
|
+
i canFam2.chrM C 0 C 0
|
|
1331
|
+
s dasNov1.scaffold_23239 11740 701 - 16977 --TCCTTGAGAAATAAAATGAACGAAAACCTATTTGCCTCATTCGC--TACCCCTACCA-TAATAGGCCTGCCAATCATCATATTAATCATCATATTCCCAAGTATTCTTTTCCCTACCCC---TA---AACGGATAATTACCAACCG---AGTGGTATCAGTCCAACAATGATTAATCAACATGATCATAAAGCAAATAATGAATATTCACAACAACAAAGGACGAACATGAACTCTTATATTAATCTCTCTCATCACATTCATCGGCACTACCAACCTACTAGGCCTATTACCACACACTTTTACACCCACCACACAACTCTCTATAAACTTAGGCATAGCTATTCCATTATGAGCAGGCGCAGTAGTAACAGGCTTCCGACATAAAACCAAAGCCTCACTAGCACACTTCCTACCACAAGGCACACCAATTCCACTGATTCCCATACTAATTATCATTGAAACCATCAGCCTGTTTATTCAACCAATAGCCCTAGCTGTCCGACTCACAGCAAACATCACAGCAGGACACCTTCTAATCCATCTA-ATTGGAGGAGCCACATTAGCCTTAATATCAATTAGCCCAACAACAGCCTCAATCACATTTATCATCTTAATTCTACTAACAATTCTAGAATTCGCAGTAGCCCTAATTCAAGCATACGTCTTCACACTACTAGTAAGCCTGTACTTACATGATAATACTTAATGACC
|
|
1332
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1333
|
+
s loxAfr1.scaffold_36650 10924 689 + 16266 --CCCTTGAAAGAAGAAGTGAACGAAGAACTATCCACCTTCTTCTATGTACCCGTAGGTACAATAATACTAGCTA---------------TTGCATTTCCAGCAATCCTACTTCCAACCCC---AA---ATCGCCTAATTACCAACCG---TTGAATTACAATCCAACAATGACTAATCCAATTAATCATAAAACAACTTCTATCTATTCATAATACAAAAGGACTGTCATGATCTCTAATATTAATTACTCTAACTTTATTCATTGGTCTAACCAATCTACTAGGTCTATTACCCTATTCATTCGCTCCCACAACACAACTAACCGTAAACTTAAGCATAGCAATCCCCCTATGGACTGGTACAGTTGTCCTGGGTTTCCGATATAAAACTAAAATCTCACTAGCCCATCTTCTCCCACAAGGAACACCTATATTCCTTATCCCTATAATTATTATTATCGAAACCATTAGTCTCCTCATTCGACCAGTCACCCTAGCGGTTCGACTCACCGCCAATATCACGGCAGGTCACTTACTTATTCATTTA-ACCGGAACCGCCACACTAACTTTATCATCCATCCATTCAATAACAATTACAGTAACATTTGTTACAGTAATTCTACTTACGATCCTGGAACTTGCCGTAGCACTAATTCAGGCCTACGTCTTTGCTCTACTAATTAGCCTCTACCTACATGAGAATGCTTAATGACT
|
|
1334
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1335
|
+
s echTel1.scaffold_181343 7323 699 + 18297 --CCCATGAAACAATAAATGAACGAAAATCTATTTGCCTCATTCTC--TACCCCTACAT-TAATAGGACTACCTATTAGTATTATAATTGTTGCATTCCCTGCCTTACTATACCCTACATC---TA---ACCGTTTAATTAGCAACCGCATTCGA---ACCCTCCAACAATACCTAATTAACCTTATTCTAAAACAAATAATAGCTACCCATAGCCCTAAAGGTCGAACCTGATCACTAATACTTATATCACTTATTATTTTTATTGCATCAACAAATCTTTTAGGTCTTTTACCCCATACATTTACACCTACTACACAACTATCTATTAATTTGGGTTTAGCAATTCCACTGTGAGCAGGAGCAGTAATTTTAGGCTTTCGCTACAAATTTAAAACATCTGTGTCCCAT-TTTTACCTCAAGGTACCCCAATCCT-CTAATCCCCATACTTATTATTATCGAAACTATTAGCCTATTTATTCAACCCATAGCACTAGCCGTTCGATTGACAGCCAATATTACAGCTGGGCACCTTCTCATACACCTA-ATTGGGGCTGCTACCCTAGCATTATTCTCAATCAGTACCTCAACAGCCCTTATTACTTTTATCATTCTTCTACTTCTTACAATACTAGAATTTGCTGTGGCACTGATTCAAGCCTATGTCTTCACTCTTCTAGTAAGCCTCTATTTACACGATAACACTTAATGACT
|
|
1336
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1337
|
+
s monDom4.chrUn 117159405 701 + 174229318 --ACCCTGACAAACAAAATGAACGAAAATTTATTTGCCCCATTCGT--CACACCAACAA-TTATAGGTATTACAACCCTACCTATTATTATTATATTTCCCTGTGTTATACTATCATCCCC---AA---AACGATGACTACCAAACCG---AATTCAAACACTACAAATCTGACTAATTCGCTTAATTACTAAACAAATAATGACAATGCATAACAAACAAGGACGAACCTGGACCCTAATACTAATCTCTTTAATTCTCTTTATCGCTTCTACTAATCTCTTAGGGCTACTCCCATATTCATTCACACCTACAACTCAACTATCAATAAATATTGGAATAGCTATCCCACTATGAGCCGGAACAGTAATTATAGGATTCCGAAACAAACCTAAAATCTCTTTAGCTCACTTCCTACCACAAGGTACTCCAACACCCCTAATTCCTATATTAATTATTATTGAGACAATTAGCTTATTTATTCAACCCCTAGCCTTAGCTGTACGATTAACTGCCAATATCACTGCAGGACATCTCCTAATTCACCTA-ATTGGAGCAGCCACTTTAGCCCTATCATCAATTAATACAACCGTTTCAACCATTACATTTTCAATTCTATTCCTTCTAACCATCTTAGAGCTAGCAGTAGCTATAATTCAAGCCTACGTATTCACGCTCCTAGTTAGTCTATACTTACACGATAATTCATAATGACC
|
|
1338
|
+
i monDom4.chrUn C 0 C 0
|
|
1339
|
+
s galGal2.chrM 9224 704 + 16775 --CCCCTGAACCTGACCATGAACCTAAGCTTCTTCGACCAATTCTC--AAGCCCCTGCC-TACTAGGAATCCCTCTAATCCTCCCATCACTCCTTCTTCCAGCCCTCCTACTTCCATCACCAGGAA---ACCGATGGATCAACAACCG---CCTCTCCACCATCCAACTCTGATTCACCCACCTAATCACAAAACAACTAATAACCCCCCTAAACAAGGCAGGTCACAAATGAGCCCTCCTACTCACCTCACTTATCCTAATACTCCTCTCCATTAACCTCCTAGGCCTCCTCCCCTACACCTTCACCCCAACTACCCAACTATCAATAAACATGGCCTTAGCCCTGCCACTATGACTAGCCACCTTACTAACAGGCCTGCGAAACCAACCCTCCGCCTCCTTAGGACACCTACTCCCTGAAGGCACCCCCACCCCACTGATTCCAGCCCTAATCATAATCGAAACAACCAGCCTACTTATTCGGCCATTAGCCCTAGGAGTACGCCTAACAGCAAACCTCACAGCTGGTCACCTACTTATCCAACTT-ATCTCTACAGCCACAATCGCCCTACTACCAATAATGCCATCAATCTCCGCCCTAACGGCACTCATCCTATTCCTACTAACCATCCTAGAAGTGGCAGTAGCAATAATCCAAGCCTACGTCTTCGTCCTCCTCCTAAGCCTCTACTTACAAGAAAATATTTAATGGCA
|
|
1340
|
+
i galGal2.chrM C 0 C 0
|
|
1341
|
+
s fr1.chrUn 326224160 703 + 349519338 ---CCCTGACCCTGATCATGACACTAAGCTTCTTCGACCAATTTCT--TAGCCCCACCG-CCTTTGGTATTCCCCTGATTGCCCTCGCTCTCCTATTACCTTGGACCCTCTTCCCCACACC---AACCAACCGTTGAACCAACAATCG---TCTTTTAACACTTCAAAGCCAATTTATTAATCGATTTACTCAACAACTGCTCCTCCCACTAAACATAGGAGGGCACAAATGAGCCCTTATATTCGCCTCATTAATAGTGTTCCTAATTACCATTAATATGCTAGGACTCCTTCCATACACATTCACCCCCACCACACAGCTTTCCGTAAATATAGCCCTAGCTGTACCCCTATGACTCGCAACAGTAATCATCGGAATACGAAACAACCCAACAGCAGCCCTAGGCCACCTTCTTCCAGAAGGCACCCCCAACGCTCTAATCCCTATCCTAATTATTATCGAAACTGTCAGCCTCTTCATTCGACCTTTAGCACTAGGAGTTCGACTAACCGCTAACCTCACAGCAGGCCACCTGTTGATTCAACTA-ATCGCTACAGCAGCTTTCGTACTCCTCCCCCTTATACCAACTGTCGCCATTCTGACATCAACCCTATTATTCCTCCTGACACTTCTAGAAGTCGCCGTCGCAATAATCCAAGCCTATGTTTTCGTACTTCTTCTAAGCCTCTACCTACAAGAAAACGTTTAATGCCC
|
|
1342
|
+
i fr1.chrUn C 0 N 0
|
|
1343
|
+
s danRer4.chrM 9034 706 + 16596 GACACTTGAAACTGACCATGATAACAAGCTTCTTCGATCAATTCGC--GAGCCCCTACC-TTTTAGGTATCCCCCTTATCCTCGTTGCCATACTTCTACCTTGACTTCTTTTTCCTGCTCC---AACATCACGATGAATCAACAATCG---ACTTATCACCGTCCAAACATGATTGACTGGACGATTCACAAACCAACTTATGACCCCACTAAACTTTAGCGGCCACAAATGAGCACTTTTATTTGCCTCTCTAATAGTATTCTTAATCACAATTAATCTTTTAGGACTTCTTCCTTATACTTTTACACCAACAACCCAACTCTCTCTGAATATAGGATTTGCAGTACCCCTATGACTTGCCACAGTAATTATCGGAATAAAAAATCAACCGACTATTGCCCTAGGACATCTTTTACCAGAAGGAACCCCCATCCCATTAATTCCGGCCCTTATTATTATCGAAACAATTAGCTTATTTATTCGACCATTAGCTTTAGGGGTACGACTTACTGCAAACCTCACAGCAGGCCACCTACTAATTCAACTT-ATTGCCACAGCAGTATTTGTTCTACTACCAATAATACCAGCAGTAGCAATTTTAACTGCCTCCGTCCTTTTCTTACTTACCCTGCTAGAAGTTGCAGTAGCAATAATCCAAGCCTACGTCTTTATTCTTCTTTTAAGCCTATATCTGCAAGAAAACATTTAATGGCC
|
|
1344
|
+
i danRer4.chrM C 0 C 0
|
|
1345
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1346
|
+
|
|
1347
|
+
a score=507751.000000
|
|
1348
|
+
s mm8.chrM 8612 99 + 16299 CACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACCATTAACTGGAGCCTTTTCAGCCCTCCTTCTAACATCAGGTCTAGTAATATGATTT
|
|
1349
|
+
s rn4.chrM 8589 99 + 16300 CACCAAACCCATGCATACCATATAGTAAACCCAAGCCCATGACCACTAACAGGAGCCCTATCAGCTCTTCTACTCACATCCGGCTTAGTAATATGATTC
|
|
1350
|
+
i rn4.chrM C 0 C 0
|
|
1351
|
+
s oryCun1.scaffold_140182 8778 99 + 20791 CACCAAACTCACGCTTACCATATAGTCAACCCAAGCCCCTGACCACTCACCGGAGCCCTATCTGCCCTTCTTATGACATCAGGCCTAGCCATATGATTT
|
|
1352
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1353
|
+
s hg18.chrM 9213 99 + 16571 CACCAATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCGGCCTAGCCATGTGATTT
|
|
1354
|
+
i hg18.chrM C 0 C 0
|
|
1355
|
+
s panTro2.chrM 8630 99 + 16554 CACCAATCACATGCCTACCACATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCGGCCCTCCTAATAACCTCCGGCCTGGCCATATGATTC
|
|
1356
|
+
i panTro2.chrM C 0 C 0
|
|
1357
|
+
s rheMac2.chr5 34444266 99 - 182086969 CACCAAACACATGCCTACCATATAGTCAAACCTAGCCCCTGACCACTAACAGGAGCTCTCTCATCTCTCCTAATAACATCTGGCCTGGCCATGTGATTT
|
|
1358
|
+
i rheMac2.chr5 C 0 M 987
|
|
1359
|
+
s bosTau2.chrM 8975 99 + 16338 CACCAAACTCATGCTTATCATATAGTAAACCCAAGCCCTTGACCTCTTACAGGAGCTTTGTCTGCCCTCTTAATAACATCCGGCCTAACCATGTGATTT
|
|
1360
|
+
i bosTau2.chrM C 0 C 0
|
|
1361
|
+
s canFam2.chrM 8649 99 + 16727 CACCAAACTCACGCTTACCACATAGTCAACCCAAGCCCATGACCGCTGACAGGGGCCCTTTCTGCCCTCCTTATAACATCGGGTCTTATCATATGATTT
|
|
1362
|
+
i canFam2.chrM C 0 C 0
|
|
1363
|
+
s dasNov1.scaffold_23239 12441 99 - 16977 CACGAGACACATGCATACCATATAGTAAACCCAAGCCCTTGACCTCTGACAGGCGCTCTATCAGCTCTACTAATAACATCAGGCCTAATCATATGATTC
|
|
1364
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1365
|
+
s loxAfr1.scaffold_36650 11613 99 + 16266 CACCAAACACATGCCTATCACATAGTAGATCCAAGCCCTTGACCTCTTACCGGAGCATTATCTGCCCTACTTATAACATCCGGCCTAACTATATGGTTT
|
|
1366
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1367
|
+
s echTel1.scaffold_181343 8022 99 + 18297 CACCAAACCCATGCTTATCATATAGTTAATCCTAGCCCTTGACCACTTACAGGGGCTCTTTCAGCACTTCTACTCACTTCAGGCCTTGCGATTTGATTC
|
|
1368
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1369
|
+
s monDom4.chrUn 117160106 99 + 174229318 CACCAAACTCACGCGTATCATATAGTTAACCCCAGCCCATGGCCATTAACAGGAGCTCTTTCAGCTCTACTTTTAACCTCCGGTATAATTATATGGTTT
|
|
1370
|
+
i monDom4.chrUn C 0 C 0
|
|
1371
|
+
s galGal2.chrM 9928 99 + 16775 CACCAAGCACACTCCTACCACATAGTTGACCCAAGCCCATGACCAATCTTCGGCGCAGCCGCAGCACTACTAACCACCTCTGGCCTAATCATATGGTTC
|
|
1372
|
+
i galGal2.chrM C 0 C 0
|
|
1373
|
+
s danRer4.chrM 9740 99 + 16596 CACCAAGCACATGCATATCACATAGTTGACCCAAGCCCATGACCACTAACTGGAGCTGTAGCCGCCCTATTAATATCATCTGGCTTAGCAATTTGGTTT
|
|
1374
|
+
i danRer4.chrM C 0 C 0
|
|
1375
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1376
|
+
|
|
1377
|
+
a score=95613.000000
|
|
1378
|
+
s mm8.chrM 8711 42 + 16299 CACTATAATTCAATTACACTATTAACCCTTGGCCTACTCACC
|
|
1379
|
+
s rn4.chrM 8688 42 + 16300 CATTACAACTCCACAATTCTCCTATCATTAGGCCTCCTGACA
|
|
1380
|
+
i rn4.chrM C 0 C 0
|
|
1381
|
+
s oryCun1.scaffold_140182 8877 42 + 20791 CATTTTAACTCCCCCTCACTTCTATTAATCGGCTTAGTGACC
|
|
1382
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1383
|
+
s hg18.chrM 9312 42 + 16571 CACTTCCACTCCATAACGCTCCTCATACTAGGCCTACTAACC
|
|
1384
|
+
i hg18.chrM C 0 C 0
|
|
1385
|
+
s panTro2.chrM 8729 42 + 16554 CACTTCTACTCCACAACACTACTCACACTAGGCTTACTAACT
|
|
1386
|
+
i panTro2.chrM C 0 C 0
|
|
1387
|
+
s rheMac2.chr15 38004541 42 - 110119387 CATTTTAATTCTACTACTCTTTTAACCCTAGGCTTATTAATC
|
|
1388
|
+
i rheMac2.chr15 I 1750 C 0
|
|
1389
|
+
s bosTau2.chrM 9074 42 + 16338 CACTTTAACTCAATGACCCTGCTAATAATTGGCCTAACAACA
|
|
1390
|
+
i bosTau2.chrM C 0 C 0
|
|
1391
|
+
s canFam2.chrM 8748 42 + 16727 CACTATAACTCAATAGCCCTACTTACATTAGGATTCACAACC
|
|
1392
|
+
i canFam2.chrM C 0 C 0
|
|
1393
|
+
s dasNov1.scaffold_23239 12540 42 - 16977 CACTTTAATTCTCCCCTATTACTAGTTCTAGGCTTAACCACT
|
|
1394
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1395
|
+
s loxAfr1.scaffold_36650 11712 42 + 16266 CATTATCACTCTGTAACCCTCCTGCTTTTAGGATTAACAACC
|
|
1396
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1397
|
+
s echTel1.scaffold_181343 8121 42 + 18297 CACTATAACTCTCCCCTCTTACTTCTTATTGGCTTGTCAACT
|
|
1398
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1399
|
+
s monDom4.chrUn 117160205 42 + 174229318 CATTATAACTCAATATTTCTTTTAATAGTTGGATTAATCTCT
|
|
1400
|
+
i monDom4.chrUn C 0 C 0
|
|
1401
|
+
s galGal2.chrM 10027 42 + 16775 CACTACAGCTCGACCACCCTACTGACAATAGGCCTCCTCTCT
|
|
1402
|
+
i galGal2.chrM C 0 C 0
|
|
1403
|
+
s danRer4.chrM 9839 42 + 16596 CACCTTCACTCAATGACATTAATTGTTCTAGGAATAATTCTT
|
|
1404
|
+
i danRer4.chrM C 0 C 0
|
|
1405
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1406
|
+
|
|
1407
|
+
a score=2914356.000000
|
|
1408
|
+
s mm8.chrM 8753 529 + 16299 --AATATCCTCACAATATATCAATGATGACGAGACGTAATTCGTGAAGGAACCTACCAAGGCCACCACACTCCTATTGTACAAAAAGGACTACGATATGGTATAATTCTATTCATCGTCTCGGAAGTATTTTTCTTTGCAGGATTCTTCTGAGCGTTCTATCATTCTAGCCTCGTACCAACACATGATCTAGGAGGCTGCTGACCTCCAACAGGAATTTCACCACTTAACCCTCTAGAAGTCCCACTACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTCATCATAGCCTTATAGAAGGTAAACGAAACCACATAAATCAAGCCCTACTAATTACCATTATACTAGGACTTTACTTCACCATCCTCCAAGCTTCAGAATACTTTGAAACATCATTCTCCATTTCAGATGGTATCTATGGTTCTACATTCTTCATGGCTACTGGATTCCATGGACTCCATGTAATTATTGGATCAACATTCCTTATTGTTTGCCTACTACGACAACTAAAATTTC
|
|
1409
|
+
s rn4.chrM 8730 529 + 16300 --AACATCCTAACTATATATCAATGATGACGAGATATCATCCGTGAAGGAACATACCAAGGCCACCACACCCCTATTGTACAAAAAGGCCTCCGATACGGAATAATCCTGTTTATTGTCTCCGAAGTATTCTTCTTTGCCGGATTTTTCTGAGCATTTTATCATTCCAGCCTAGTTCCTACCCACGACCTAGGCGGTTGCTGACCCCCAACAGGAATCACCCCTTTAAATCCCCTAGAAGTACCCCTTCTAAATACATCAGTCCTCTTAGCATCAGGAGTCTCAATTACATGAGCCCATCACAGCCTAATAGAAGGCAACCGAAACCATATAAACCAAGCCCTACTAATCACCATTCTCTTAGGATTATATTTCACTATCTTACAAGCCTCAGAGTATTTCGAAACATCATTTTCTATCTCAGACGGAATTTACGGCTCAACATTCTTCATAGCAACGGGATTTCATGGCCTCCACGTAATTATTGGCTCAACTTTCCTAATTGTCTGTCTACTACGACAACTAAAATTCC
|
|
1410
|
+
i rn4.chrM C 0 C 0
|
|
1411
|
+
s oryCun1.scaffold_140182 8919 529 + 20791 --AACACTCTCACCATATACCAATGATGACGAGACATCGTACGAGAAGGTACATTCCAAGGCCACCATACTCCTATTGTACAAAAAGGCCTACGATATGGCATAATTCTCTTTATCATCTCAGAAGTATTCTTTTTCGCGGGCTTCTTCTGAGCCTTCTACCACTCAAGCCTAGCTCCTACCCCAGAACTAGGAGGATGCTGACCTCCAACAGGCATCAACCCCCTTAATCCCCTTGAAGTGCCGCTACTAAACACTTCAGTCCTCCTGGCTTCAGGAGTCTCAATCACCTGGGCCCACCACAGTTTAATAGAAGGCAATCGCAAAAACATACAGCAAGCTCTAGCCATTACCATTCTCCTAGGTATCTATTTTACCCTACTTCAAGCATCGGAGTATTACGAAACATCTTTTACTATTTCAGATGGAGTCTACGGATCAACATTCTTCATAGCCACAGGATTTCACGGTCTTCACGTCATCATTGGGTCCACTTTTCTTACGGTCTGCCTTCTACGACAATTTAACTTTC
|
|
1412
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1413
|
+
s hg18.chrM 9354 529 + 16571 --AACACACTAACCATATACCAATGGTGGCGCGATGTAACACGAGAAAGCACATACCAAGGCCACCACACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTATTACCTCAGAAGTTTTTTTCTTCGCAGGATTTTTCTGAGCCTTTTACCACTCCAGCCTAGCCCCTACCCCCCAACTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCCTAGAAGTCCCACTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATATTTC
|
|
1414
|
+
i hg18.chrM C 0 C 0
|
|
1415
|
+
s panTro2.chrM 8771 529 + 16554 --AACACATTGACCATATATCAATGATGACGCGATGTTATACGAGAAGGCACATACCAAGGCCACCACACACCACCCGTCCAAAAAGGTCTCCGATATGGGATAATTCTTTTTATTACCTCAGAAGTTTTTTTCTTTGCAGGATTTTTTTGAGCTTTCTACCACTCCAGCCTAGCCCCTACCCCCCAGCTAGGAGGACACTGGCCCCCAACAGGTATTACCCCACTAAATCCCCTAGAAGTCCCACTCCTAAACACATCTGTATTACTCGCATCAGGAGTATCAATTACTTGAGCCCATCACAGCTTAATAGAAAATAACCGAAACCAAATAATTCAAGCACTGCTTATTACGATTCTACTAGGTCTTTATTTTACCCTCCTACAAGCCTCAGAATATTTCGAATCCCCTTTTACCATTTCCGATGGCATCTACGGCTCAACATTCTTTGTAGCCACAGGCTTCCACGGACTCCACGTCATTATTGGATCAACTTTCCTCACTATCTGCCTCATCCGCCAACTAATATTTC
|
|
1416
|
+
i panTro2.chrM C 0 C 0
|
|
1417
|
+
s rheMac2.chr15 38004583 528 - 110119387 --AACACACTAACTGTATACCAATGATGATGTAATATTATCCGAGAAAGTAAATTTCAAGGCCACCATATAACAGTTGTCCAAAAAGGCCTCCAATATGGAATAATTCTATTTATTATCTCAGAAG-TTTCTTCTTTGCTGGTTTCTTCTGGGCATTCTATCACTCTGGTCTAGCCCTAATGCCAGAATTAGGAGGACAGTGACCCCCAACAGGCATTTTTCCCCTCAACCCCTTAGCAGTACCCCTCTTGAATACATCTGTATTACTTGCATCAGGAGTTTCAGTTACTTGGGCTCATCACAGCCTGATAGAAGGTAATCGAAAGCAAATAATTCTAGCACTATCCATCAGAATTACCTTAGGTATTTACTTCACCCTCCTACAAATCTCAGAATACTTTGAGGCCGCTTTTACTATCTCTGATGGGATCTACGGCTCAACAATCTTTTTAGCCACAGGCTTTCATGGATTTCATGTTATTACTGGATCAACATTTCTCACTATCTGCTTCCTCCACCAATTAAAATATC
|
|
1418
|
+
i rheMac2.chr15 C 0 I 6148
|
|
1419
|
+
s bosTau2.chrM 9116 529 + 16338 --AATATACTAACAATATACCAATGATGACGAGATGTTATCCGAGAAAGCACCTTCCAAGGGCACCATACCCCAGCTGTCCAAAAAGGCCTCCGTTATGGAATAATTCTTTTTATTATCTCCGAAGTACTATTCTTTACCGGATTTTTCTGAGCTTTCTACCACTCAAGCCTCGCCCCCACCCCTGAACTAGGCGGCTGCTGACCCCCAACAGGCATTCACCCACTAAACCCCCTAGAAGTCCCACTGCTCAACACCTCTGTCCTATTGGCTTCCGGAGTTTCTATTACCTGAGCCCATCATAGTTTAATAGAAGGGGACCGAAAGCATATATTACAAGCCCTATTTATCACCATCACATTAGGAGTCTACTTCACACTACTACAAGCCTCAGAATACTATGAAGCACCTTTTACTATCTCCGACGGAGTTTACGGCTCAACTTTTTTTGTAGCCACAGGCTTCCACGGCCTCCACGTCATCATTGGGTCCACCTTCTTAATTGTCTGCTTCTTCCGCCAATTAAAATTTC
|
|
1420
|
+
i bosTau2.chrM C 0 C 0
|
|
1421
|
+
s canFam2.chrM 8790 529 + 16727 --AACCTGTTAACCATATGCCAGTGATGACGAGATGTGATCCGAGAAGGCACATTCCAAGGACATCATACCCCTATTGTACAAAAAGGACTACGATACGGAATAGTTCTTTTTATCGTATCAGAAGTATTTTTCTTTGCAGGCTTCTTCTGAGCCTTTTACCACTCCAGCCTAGCCCCTACTCCTGAACTTGGGGGTTGCTGACCTCCTACCGGCATTATTCCTCTTAACCCATTAGAAGTGCCTCTACTCAACACCTCAGTCCTCCTAGCCTCCGGAGTATCTATTACTTGAGCCCATCATAGTTTAATAGAAGGTAATCGCAAACATATACTTCAAGCCTTATTCATTACAATCTCCTTAGGCGTATATTTTACGCTATTACAGGCCTCCGAATACTATGAGACATCTTTTACAATCTCCGATGGGGTATACGGATCTACCTTTTTTATAGCCACTGGATTTCACGGATTACACGTAATTATTGGCTCTACATTCCTCATCGTGTGCTTCCTCCGACAGCTATACTACC
|
|
1422
|
+
i canFam2.chrM C 0 C 0
|
|
1423
|
+
s dasNov1.scaffold_23239 12582 529 - 16977 --AACTTCTTAACTATATACCAATGATGACGAGACATTATTCGAGAAAGCACATTTCAAGGTCACCACACAACCATTGTACAAAAAGGCCTACGATACGGCATAATCCTATTCATTGTGTCAGAAGTGTTCTTCTTTGCGGGTTTCTTCTGAGCCTTTTACCACTCAAGCCTAGCTCCAACTCCAGAACTAGGAGGCTGCTGACCACCAACAGGAATTAACCCTCTCAACCCCCTAGAAGTACCCTTACTAAATACATCAGTCCTTCTTGCCTCAGGAGTATCAATTACATGGGCACACCATAGCTTAATAGAAGGTCACCGAAAGCACATACTACAAGCCCTATTTATTACTATCGCTCTAGGCGTATACTTTACCCTCTTACAAGCCTCAGAATATTACGAAGCACCATTCACAATTTCCGACGGCATTTACGGCTCCACGTTCTTTGTAGCAACCGGATTCCATGGACTACACGTAATTATCGGCTCATCTTTCCTAATCGTCTGCTTCATACGTCAACTAAAATTTC
|
|
1424
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1425
|
+
s loxAfr1.scaffold_36650 11754 529 + 16266 --AATATCCTAACTATATTTCAATGATGACGAGATGTAGTTCGAGAAGGAACCTTCCAAGGCCACCATACACCTGTCGTGCAAGAAAGTTTACGATATGGTATAATTTTATTTATCACCTCTGAAGTATTATTCTTCACAGGTTTCTTCTGAGCCTTTTATCACTCCAGTCTAGCACCTACCCCTGAACTAGGAAGCTATTGACCTCCAGTAGGTGTCTACCCACTAAATCCACTAGAAGTACCGCTTCTAAATACATCAGTCCTCCTAGCTTCAGGAGTGACTATTACCTGAGCTCACCATAGCTTAATAGAAGGAAACCGTAAAAATATACTTCAAGCCCTCCTTATTACTATTCTCTTAGGAGTCTACTTCACACTTCTCCAAATGTTTGAGTACTATGAAGCATCCTTTACAATCTCCGATGGCATCTACGGCTCAACTTTCTTTGTAACCACAGGATTCCATGGCCTACACGTTATTATTGGCTCTACATTTCTCCTAACCTGCTTTATTCGCCAACTTAAATTCC
|
|
1426
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1427
|
+
s echTel1.scaffold_181343 8163 529 + 18297 --AATCTACTAACTATATATCAATGATGACGTGATATTATTCGAGAAAGCACCTTTCAAGGTCATCACACACCTTTTGTCCAAAAAGGTCTACGCTATGGAATAATCCTCTTTATTATCTCTGAAGTATTCTTTTTCGCCGGCTTCTTCTGAGCTTTCTACCATTCAAGTTTAGCCCCAACACCAGAGTTAGGTGGCTGCTGGCCCCCTACAGGAATTACTCCCCTAAACCCCCTGGAAGTCCCTCTATTAAACACCGCTATTCTCCTGGCCTCCGGAGTTACTATCACCTGAGCCCACCACAGCCTCATAGAAGGAAATCGAAAGCAAATAATTCAAGCACTATCCATCACGATCGCTCTAGGCATTTACTTTACACTTCTTCAAGCCTCGGAATATTATGAGACTCCATTTACTATTTCTGATGGAGTCTACGGCTCAACATTTTTTGTAGCCACGGGTTTCCATGGTCTTCATGTTATTATTGGCTCCACTTTCCTCATTGTTTGCCTACTACGTCAAGTAATGTTCC
|
|
1428
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1429
|
+
s monDom4.chrUn 117160247 529 + 174229318 --ATACTCCTGACAATATACCAATGATGACGAGACATTATCCGTGAAGGGACATTTCAAGGACACCATACCCCAGTAGTACAAAAGGGATTGCGATATGGAATAGTACTATTTATCTTATCAGAAGTTTTCTTCTTCATTGGCTTCTTCTGAGCATTTTATCACTCAAGCTTAGCCCCTACCCATGAATTAGGGGGTTGTTGACCCCCAACCGGAATTCATCCACTTAACCCACTTGAAGTCCCACTATTAAATACATCAATCCTACTAGCCTCAGGCGTATCGATCACATGAGCCCACCATAGTCTAATAGAAGGTAATCGAAAACAAATAATTCAAGCACTTACTATTACAATCCTCCTGGGTCTCTACTTCACTATTCTTCAAGCCATAGAGTACTATGAATCCCCTTTCACAATTTCTGATGGTATCTATGGGTCCACCTTTTTTGTAGCTACAGGATTTCACGGTTTACATGTAATTATTGGATCAACATTTTTAATTGTCTGCTTACTTCGACAATTCTACTTCC
|
|
1430
|
+
i monDom4.chrUn C 0 C 0
|
|
1431
|
+
s galGal2.chrM 10069 529 + 16775 --ATACTTCTAGTCATGCTGCAATGATGACGAGACGTAGTCCGAGAAAGCACCTTCCAGGGCCACCACACCCCAACTGTCCAAAAGGGCCTACGATACGGAATAATCCTTTTCATTACATCAGAGGCCTTCTTCTTCCTAGGATTCTTCTGAGCCTTCTTCCACTCAAGCCTAGCCCCAACACCAGAACTGGGGGGCCAATGGCCCCCAACAGGAGTCAAACCCCTAAACCCCCTTGAAGTACCCCTACTAAATACAGCAATCCTCCTAGCCTCAGGAGTCACCGTTACATGGGCTCACCACAGCATCACAGAAGGAAACCGAAAACAAGCCATCCACGCACTAACTCTCACAATCCTCCTAGGATTCTATTTCACAGCCCTACAAGCAATAGAGTACCATGAAGCCTCCTTCTCAATCGCTGACAGCGTCTACGGCTCCACCTTCTTCGTCGCTACAGGGTTCCACGGACTACATGTAATCATTGGATCATCCTTTTTAACAGTTTGCCTCCTACGACTAATCAAATTCC
|
|
1432
|
+
i galGal2.chrM C 0 C 0
|
|
1433
|
+
s tetNig1.chrUn_random 10672521 529 - 171761319 --AATTCGCTCACCATGTACCAATGATGACGAGACATCGTACGAGAAGGCACCTTCCAAGGCCACCACACACCCCCTGTTCAAAAAGGCCTTCGTTATGGTATAATCCTTTTTATTACCTCTGAGGTGTTTTTCTTCCTTGGTTTTTTCTGAGCCTTCTACCACTCAAGCCTAGCCCCCACCCCGGAACTCGGAGGCTGCTGACCACCCACAGGCATTGTACCACTCAACCCCTTTGAGGTCCCCCTTCTTAACACAGCAGTCCTACTGGCATCAGGAGTAACAGTAACCTGAGCACACCATAGCATTATAGAAGGAGAACGAAAACAAGCAATTCACTCTCTAACCCTAACGATCCTATTAGGCTTCTACTTTACTTTCCTACAGGCAATAGAATACTACGAAGCTCCATTCACAATTGCCGACGGAGTTTATGGCTCGACCTTCTTTGTCGCCACTGGCTTCCACGGACTCCACGTTATCATTGGCTCTACCTTCCTAGCCATCTGCCTACTTCGTCAAATCCGATACC
|
|
1434
|
+
i tetNig1.chrUn_random N 0 C 0
|
|
1435
|
+
s danRer4.chrM 9881 529 + 16596 CTTATT--TTAACTATAATCCAATGATGACGAGACATTATTCGAGAAGGGACCTTTCAAGGCCACCATACCCCGCCCGTACAAAAAGGGTTGCGGTACGGTATAATCCTATTTATTACCTCAGAGGTATTTTTTTTCCTAGGATTTTTCTGAGCTTTTTATCATTCAAGTTTAGCCCCCACCCCTGAACTAGGGGGATGTTGACCACCCACAGGGCTAACAACTCTTGACCCATTTGAAGTGCCGCTCCTCAATACAGCTGTTTTGCTAGCATCCGGAGTAACAGTAACATGAGCACATCACAGCCTCATGGAAGGAGAACGAAAACAAGCCATTCAATCTCTTGCTCTTACAATTCTACTAGGATTGTACTTCACAGCACTTCAGGCTATAGAATACTATGAAGCCCCATTTACAATTGCAGACGGAGTATATGGCTCAACATTCTTTGTAGCTACAGGGTTTCATGGTCTACACGTTATTATTGGATCAACCTTTTTAGCTGTATGCCTTCTACGCCAAGTTTTATTTC
|
|
1436
|
+
i danRer4.chrM C 0 C 0
|
|
1437
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1438
|
+
|
|
1439
|
+
a score=738151.000000
|
|
1440
|
+
s mm8.chrM 9282 103 + 16299 ACTTCACATCAAAACATCACTTCGGATTTGAAGCCGCAGCATGATACTGACATTTTGTAGACGTAGTCTGACTTTTCCTATACGTCTCCATTTATTGATGAGG
|
|
1441
|
+
s rn4.chrM 9259 103 + 16300 ACTTCACATCAAAACATCATTTCGGATTTGAAGCCGCAGCATGATACTGACACTTCGTAGATGTAGTTTGACTATTCCTATACGTTTCTATCTATTGATGAGG
|
|
1442
|
+
i rn4.chrM C 0 C 0
|
|
1443
|
+
s oryCun1.scaffold_140182 9448 103 + 20791 ACTTTACATCGAACCACCACTTTGGTTTTGAAGCAGCCGCATGATACTGACACTTTGTAGATGTAGTCTGACTATTCCTATATGTATCAATCTATTGATGAGG
|
|
1444
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1445
|
+
s hg18.chrM 9883 103 + 16571 ACTTTACATCCAAACATCACTTTGGCTTCGAAGCCGCCGCCTGATACTGGCATTTTGTAGATGTGGTTTGACTATTTCTGTATGTCTCCATCTATTGATGAGG
|
|
1446
|
+
i hg18.chrM C 0 C 0
|
|
1447
|
+
s panTro2.chrM 9300 103 + 16554 ACTTCACATCCAAACATCACTTCGGCTTTCAAGCCGCCGCCTGATACTGACACTTCGTAGATGTAGTCTGACTATTTCTATATGTCTCTATTTACTGATGAGG
|
|
1448
|
+
i panTro2.chrM C 0 C 0
|
|
1449
|
+
s rheMac2.chr15 38011259 103 - 110119387 aCTTTACATCCAACCACCACTTTGGCTTTGAAGCCACTGCCTGATATTGGCACTTCGTAGATGTAGTGTGACTATTCTTATACGTCTCTATCTACTGATGAGG
|
|
1450
|
+
i rheMac2.chr15 I 6148 C 0
|
|
1451
|
+
s bosTau2.chrM 9645 103 + 16338 ATTTTACTTCTAACCACCACTTCGGCTTTGAAGCCGGTGCCTGATACTGACATTTCGTAGACGTAGTCTGACTTTTCCTCTATGTTTCTATCTATTGATGAGG
|
|
1452
|
+
i bosTau2.chrM C 0 C 0
|
|
1453
|
+
s canFam2.chrM 9319 103 + 16727 ACTTCACATCAAACCACCACTTCGGATTTGAAGCCGCTGCATGATATTGACACTTTGTTGATGTAGTCTGGCTATTCTTGTATGTATCTATTTATTGATGAGG
|
|
1454
|
+
i canFam2.chrM C 0 C 0
|
|
1455
|
+
s dasNov1.scaffold_23239 13111 103 - 16977 ACTTCACATCTAGCCATCATTTCGGTTTTGAAGCCGCAGCTTGATACTGACACTTCGTAGACGTAGTCTGACTATTCCTATACGTTTCCATCTATTGATGAGG
|
|
1456
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1457
|
+
s loxAfr1.scaffold_36650 12283 103 + 16266 ATTTTACATCCAACCATCACTTTGGCTTTGAAGCAGCTGCTTGATATTGACATTTCGTAGATGTAGTATGACTATTCCTCTATCTATCCATTTACTGATGAGG
|
|
1458
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1459
|
+
s echTel1.scaffold_181343 8692 103 + 18297 ACTTCACTTCTAAACACCACTTTGGATTCGAAGCTGCTGCTTGATACTGACATTTTGTTGATGTAGTATGGCTATTCCTCTATGTCTCAATCTATTGATGAGG
|
|
1460
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1461
|
+
s monDom4.chrUn 117160776 103 + 174229318 ACTTTACTTCCACACACCATTTTGGCTTTGAAGCAGCAGCTTGATACTGACATTTTGTAGACGTTGTATGACTATTCCTCTATGTATCCATCTATTGATGAGG
|
|
1462
|
+
i monDom4.chrUn C 0 C 0
|
|
1463
|
+
s galGal2.chrM 10598 103 + 16775 ACTTCACACCAAACCACCACTTCGGATTTGAAGCAGCAGCCTGATACTGACACTTCGTAGACATCATCTGACTCTTCCTCTACATATCCATATACTGATGAGG
|
|
1464
|
+
i galGal2.chrM C 0 C 0
|
|
1465
|
+
s tetNig1.chrUn_random 10673050 103 - 171761319 ACTTTACATCCGAACATCACTTCGGCTTCGAAGCAGCAGCCTGATACTGACACTTTGTAGATGTCGTCTGACTATTCCTCTACATCTCAATCTACTGATGAGG
|
|
1466
|
+
i tetNig1.chrUn_random C 0 N 0
|
|
1467
|
+
s danRer4.chrM 10410 103 + 16596 ACTTCACATCAGACCACCACTTTGGTTTTGAAGCTGCCGCTTGATATTGACACTTCGTCGACGTAGTCTGACTATTCCTCTACGTATCAATCTATTGATGAGG
|
|
1468
|
+
i danRer4.chrM C 0 C 0
|
|
1469
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1470
|
+
|
|
1471
|
+
a score=857783.000000
|
|
1472
|
+
s mm8.chrM 9385 254 + 16299 ATCTTA-CTCCCTTAGTA-T--AATTAATATAACTGACTTCCAATTAGTAGATTCTGAAT--AAACCCAGAAGAGAGTAATTAAC---CTGTACACTG----TTATCTTCATTAATATTTTATTATCCCTAACGCTAATTCTAGTTGCATTCTGACTCCCCCAAATAAATCTGTACTCAGAAAAAGCAAATCCATATGAATGCGGATTCGACCCTACAAGCTCTGCACGTCTACCATTCTCAATAAAATTTTTCTTGGTAGCAATTA
|
|
1473
|
+
s rn4.chrM 9362 254 + 16300 ATCCTA-CTCCCTTAGTA-T--AAACAATACAACTGACTTCCAATCAGTTAATTCTGAAA--AAACTCAGAAGAGAGTAATTAAC---CTACCCATTA----TCATCACAATTAACATCACCTTATCCTTTATCCTCATTTCAATTGCATTCTGATTGCCTCAAATAAACTTATACTCCGAAAAAGCAAACCCATATGAATGTGGCTTCGACCCAACAAGTTCTGCACGCCTTCCTTTTTCAATAAAATTTTTCTTAGTAGCCATTA
|
|
1474
|
+
i rn4.chrM C 0 C 0
|
|
1475
|
+
s oryCun1.scaffold_140182 9551 256 + 20791 GTCATA-CTCTTTTAGTA-TC-AACTAGTACAGCTGACTTCCAATCAGTTAGTTTTGGCT-CCAACCCAAAAAAGAGTAATAAAC---CTAATACTAG----TACTATTAATTAACACCACCATTTCCTTAGTCCTAGTTACAATTGCATTCTGACTCCCTCAATTAAATATCTATTCAGAAAAATCAAGCCCTTATGAATGCGGATTCGATCCCATAGGATCAGCACGACTCCCTTTCTCTATAAAATTTTTTCTAGTAGCCATTA
|
|
1476
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1477
|
+
s hg18.chrM 9986 254 + 16571 GTCTTA-CTCTTTTAGTA-T--AAATAGTACCGTTAACTTCCAATTAACTAGTTTTGACA--ACATTCAAAAAAGAGTAATAAAC---TTCGCCTTAA----TTTTAATAATCAACACCCTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAACGGCTACATAGAAAAATCCACCCCTTACGAGTGCGGCTTCGACCCTATATCCCCCGCCCGCGTCCCTTTCTCCATAAAATTCTTCTTAGTAGCTATTA
|
|
1478
|
+
i hg18.chrM C 0 C 0
|
|
1479
|
+
s panTro2.chrM 9403 254 + 16554 ATCTTA-CTCTTTTAGTA-T--AAGTAGTACCGTTAACTTCCAATTAACTAGTTTTGACA--ACATTCAAAAAAGAGTAATAAAC---TTCGTCCTAA----TTTTAATAACCAATACCCTTCTAGCCCTACTACTGATAATTATCACATTCTGACTACCACAACTCAACAGCTACATAGAAAAATCTACCCCTTACGAATGTGGCTTCGACCCTATATCCCCCGCCCGCGTCCCCTTCTCCATAAAATTTTTCCTAGTAGCCATCA
|
|
1480
|
+
i panTro2.chrM C 0 C 0
|
|
1481
|
+
s rheMac2.chr15 38011362 250 - 110119387 ATCCTA-CTCTTTTAGTA-T--AAACAGCACCATTGACTTTCAATCAACTAGTTTCGATA--ATATCTGAAACAGATT----AAC---CTGACACTAG----CCTTAGTAACCAACACCTTACTGACCCTACTAGTAATAATAATTACATTTTGACTTCCACAACTTAATATTTATATAGATAAATCCAGTCCCTATGAAGGCAGATTTGACCCAATAACCTCCAACCGCCTCCCCTTTTCCATAAAATTCTTCCTGGTAGCCATCA
|
|
1482
|
+
i rheMac2.chr15 C 0 n 0
|
|
1483
|
+
s bosTau2.chrM 9748 255 + 16338 CTCCTA-TTCTTTTAGTATT--AACTAGTACAGCTGACTTCCAATCAGCTAGTTTCGGTC--TAGTCCGAAAAAGAATAATAAAT---TTAATACTAG----CCCTCCTGACCAATTTTACACTAGCCACCCTACTCGTCATCATCGCATTCTGACTTCCCCAACTAAATGTATACTCTGAGAAAACAAGCCCATACGAATGTGGATTTGACCCCATAGGATCAGCCCGCCTTCCCTTCTCTATAAAATTCTTTCTGGTAGCCATCA
|
|
1484
|
+
i bosTau2.chrM C 0 C 0
|
|
1485
|
+
s canFam2.chrM 9422 254 + 16727 ATCCTA-TTTCTTTAGTA-T--AACTAGTACAATTGACTTCCAATCAGTTAGCTCCAGAT--CAACCTGGAAAGAAGTAATAAAC---GTTATATTAA----CTTTGATAACTAATGTAACCCTAGCATCCTTACTTGTACTAATCGCATTCTGACTTCCCCAGCTAAATATCTATACAGACAAGACAAGCCCCTACGAATGTGGTTTTGACCCCATGGGATCTGCTCGCCTACCTTTCTCTATAAAATTTTTCCTAGTTGCCATCA
|
|
1486
|
+
i canFam2.chrM C 0 C 0
|
|
1487
|
+
s dasNov1.scaffold_23239 13214 256 - 16977 CTCATG-CTCTATTAGTATT--AAGCAGTACAGTTGACTTCCAATCAACTAGATTCGGTA-TCAACCCGAAATAGAGCAATAAAC---ATTATAATTA----CACTATTCATCAACATATCCCTAGCCTCCTTACTGGTACTAATTGCATTCTGACTACCTCAGTTAAACACATACACAGAAAAATCAAGCCCATATGAATGCGGGTTTGACCCAATAGGGTCAGCCCGTCTACCCTTTTCCATAAAATTCTTTCTAGTAGCCATCA
|
|
1488
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1489
|
+
s loxAfr1.scaffold_36650 12386 256 + 16266 ATCCTA-TTTCTTTAGTA-TTAACTTAGTATAACTAACTTCCAATTAGTAGGCTTTGGTA--AATCCCAAAAAGAAATAATCAAC---CTTATAATCA----CGCTACTAACCAATACTATACTAACATCACTTATAGTTCTAATCGCATTTTGACTGCCCCAAACATACAATTACTCAGAGAAAACAAGTCCATACGAATGCGGCTTTGATCCAGTAGGCTCTGCTCGCTTACCATTCTCAATAAAATTCTTCTTAGTAGCTATCA
|
|
1490
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1491
|
+
s echTel1.scaffold_181343 8795 254 + 18297 GTCTTA-ATTCTTT--TA-GTATATCAGTACAGATAACTTCCAATTATCTAGATCTAGTT--CAGTCTAGGAAAGAATAATTAAC---TTAATAATTACTATCACTATTAATGTATTCT----TAGCCTCACTTTTAGTATTAATTGCCTTTTGACTACCCCAACTGAATTTATACATCGAAAAATCAAGCCCCTATGAATGTGGCTTTGATCCAATAAACTCAGCCCGACTACCTTTCTCAATAAAATTTTTCCTTATCGCCGTTA
|
|
1492
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1493
|
+
s monDom4.chrUn 117160879 254 + 174229318 TTCCTA-TTTTTCTAGTA-T--AATTAGTACTACTGATTTCCAATCATTAAGTTCTGGGT--AATTCCAGAGAAAAATAATTAAT---CTCATAGTTA----CTCTTCTAGTAAATTCTCTCCTAGCTACAATCGTAATTATTATTGCCTTTTGACTTCCTCAACTATACTTGTACATAGAGAAGGCAAGCCCCTATGAATGTGGCTTTGACCCCTTAGGTTCGGCACGCCTGCCATTTTCAATGAAGTTTTTTCTAGTAGCAATTA
|
|
1494
|
+
i monDom4.chrUn C 0 C 0
|
|
1495
|
+
s galGal2.chrM 10701 258 + 16775 ATCTTG-CTCTTCTAGTA-T--ACTCATTACAACTGACTTCCAATCTTTAAAATCTGGTA-TCAACCCAGAGAAGAGCAATGAACACACTTACATTTA----TACTCTCACTATCCTTTCTACTAAGCGCTGCACTAACTACTATAAACTTTTGACTAGCCCAAATAGCCCCAGACACAGAAAAACTGTCACCGTACGAATGCGGATTTGACCCACTAGGATCAGCCCGACTCCCATTCTCAATCCGATTCTTCCTAGTAGCCATCC
|
|
1496
|
+
i galGal2.chrM C 0 C 0
|
|
1497
|
+
s danRer4.chrM 10513 260 + 16596 CTCATAGCCTTTCTAGTA-T--AACCAGTATAAATGACTTCCAATCATTTGGTCTTGGTGAAAAATCCAGGGAAAGGTAATGAATTTATTTGCAACTA----TTCTTATTATTATAACGACCTTATCATTGGTCTTAGCTCTAGTATCATTTTGACTACCACAAATGAACTCTGATACAGAAAAGCTATCACCATATGAATGCGGATTTGATCCACTAGGGTCCGCCCGCCTACCATTTTCATTACGATTTTTCTTAGTAGCAGTTT
|
|
1498
|
+
i danRer4.chrM C 0 C 0
|
|
1499
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1500
|
+
|
|
1501
|
+
a score=5778556.000000
|
|
1502
|
+
s mm8.chrM 9639 1652 + 16299 CATTTCTATTATTTGACCTAGAAATTGCTCTTCTACTTCCACTACCATGAGCAATTCA----AACAATTAAAACCTCTACTATAATAATTATAGCCTTTATTCTAGTCACAATTCTATCTCTAGGCCTAGCATATGAATGAACACAAAAAGGATTAGAATGAACAGAGTAAATGGTAATTAGTTTAA-A-A--AAAATTAATGATTTCGACTCATTAGATTATGATGAT-GTTCATAATTACCAATA-TGCCATCTACCTTCTTCAACCTCACCATAGCCTTCTCACTATCACTTCTAGGGACACTTATATTTCGCTCTCACCTAATATCCACATTACTATGCCTGGAAGGCATAGTATTATCCTTATTTATTATAACTTCAGTAACTTCCCTAAACTCCAACTCCATAAGCTCCATACCAATCCCCATCACCATCTTAGTTTTCGCAGCCTGCGAAGCAGCTGTAGGACTAGCCCTACTAGTAAAAGTTTCAAACACGTACGGAACAGATTACGTCCAAAATCTCAACCTACTACAATGCTAAAAATTATTCTTCCCTCACTAATGCTACTACCACTAACCTGACT---ATCAAGCCCTAAAAAAA---CCTGAACAAACGTAACCTCATATAGTTTTCTAATTAGTTTAACCAGCCTAACACTTCTATGACAAACCGACGAAAATTATAAAAACTTTTCAAATATAT---TCTCCTCAGACCCCCTATCCACACCATTAATTATTTTAACAGCCTGATTACTGCCACTAATATTAATAGCTAGCCAAAACCACCTAAAAAAAGATAATAACGTACTACAAAAACTCTACATCTCAATACTAATCAGCTTACAAATTCTCCTAATCATAACCTTTTCAGCAACTGAACtaattatattttatattttatttGAAGCAACCTTAATCCCAACACTTATTATTATTACCCGATGAGGGAACCAAACTGAACGCCTAAACGCAGGGATTTATTTCCTATTTTATACCCTAATCGGTTCTATTCCACTGCTAATTGCCCTCATCTTAATCCAAAACCATGTAGGAACCCTAAACCTCATAATTTTATCATTCACAACACACACCTTAGACG--CTTCATGATCTAACAACTTACTATGGTTGGCATGCATAATAGCATTTCTTATTAAAATACCATTATATGGAGTTCACCTATGACTACCAAAAGCCCATGTTGAAGCTCCAATTGCTGGGTCAATAATTCTAGCAGCTATTCTTCTAAAATTAGGTAGTTACGGAATAATTCGCATCTCCATTATTCTAGACCCACTAACAAAATATATAGCATACCCCTTCATCCTTCTCTCCCTATGAGGAATAATTATAACTAGCTCAATCTGCTTACGCCAAACAGATTTAAAATCACTAATCGCCTACTCCTCAGTTAGCCACATAGCACTTGTTATTGCATCAATCATAATCCAAACTCCATGAAGCTTCATAGGAGCAACAATACTAATAATCGCACATGGCCTCACATCATCACTCCTATTCTGCCTAGCAAACTCCAACTACGAACGGATCCACAGCCGTACTATAATCATGGCCCGAGGACTTCAAATGGTCTTCCCACTTATAGCCACATGATGACTGATAGCAAGTCTAGCTAATCTAGCTCTACCCCCTTCAATCAATCTA
|
|
1503
|
+
s galGal2.chrM 10959 1651 + 16775 TATTCCTTTTATTCGACCTAGAAATCGCCCTGCTTCTTCCCCTTCCATGAGCCATCCA----ACTTGCACACCCTATAATAACCCTTACTTGAGCCACCACTATCATCGCCCTCCTCACATTTGGTCTCATCTACGAATGAACTCAGGGCGGCTTAGAATGAGCAGAATAACAGAAAGTTAGTCTAA-C-T--AAGACAGCTGGTTTCGACCCAGCAAATTATAGACCC-ACCTATAACTTTCTT-A-TGTCTCCCCTACACTTCAGCTTCTATTCTGCATTCACATTCAGCAGCCTAGGACTAGCATTCCACCGAACACACCTCATCTCTGCCCTACTATGCCTAGAGAGCATAATACTATCCATATTCATCCCCCTCTCAATCTGACCAGTAGAAAACCAAACCCCATCATTCGCCCTTGTACCTATCCTAATACTAGCCTTCTCAGCATGCGAAGCTGGCACAGGCCTAGCCATACTAGTAGCTTCTGCACGAACACATGGCTCTGACCACCTACACAACCTAAACCTTCTACAATGCTAAAGATCATCCTACCAACAATCATACTCTTGCCCACAGCCCTCTT---ATCCCCAGCAAAATCCA---TATGAACTAACACCACAATATACAGCCTTCTAATCGCCTCGATCAGCCTACACTGACTAACCCCATCATACTACCCCACAAAAACCCTAACCCTCTGAA---CAGGCATAGACCAAATCTCAACTCCCCTCTTAGTACTCTCCTGCTGGTTTCTCCCCCTCATAATTATAGCTAGCCAAGGCCACCTACAACATGAACCCCACAAACGAAAACGAATATTCATCTCCACCTTAATCATCATCCAACCATTCATCATCCTAGCCTTCTCAGCAACTGAACTCATACTATTCTACATCTCATTCGAAGCAACCCTAATCCCAACCCTCATCTTAATCACACGCTGAGGAAACCAACCAGAACGACTTAGCGCAGGCATTTACCTTCTATTCTATACCCTAATTAGCTCTCTTCCCCTACTAGTCTCCATCCTCTACCTTCACACAAATACTGGAACCCTCCACCTACCCATTATCAAACTCACCCACCCCAACCTACCTG--CCTCCTGAACAAGCTTATTATCTAGCCTAGCTCTCCTAATAGCCTTTATAGTCAAAGCACCCCTATACGGACTACACCTATGACTGCCTAAAGCCCATGTAGAAGCACCAATCGCAGGCTCCATACTACTCGCTGCTCTACTACTAAAACTAGGCGGATATGGCATCATACGAGTCACCCTCCTAATGGAGCCCGTATCCAACTTCTTACACTACCCCTTCCTCACCCTAGCCCTATGAGGTGCCCTAATAACTAGCTCTATCTGCTTACGCCAAACAGACCTAAAATCCCTCATTGCCTACTCATCCGTAAGCCATATGGGCCTAGTCATCGCTGCAAGTATAATCCAAACCCAATGATCATTCTCAGGTGCAATAATCCTCATAATCTCCCATGGACTAACCTCTTCCCTTTTATTCTGCCTAGCAAACACAAACTACGAACGGACACACAGCCGCATTCTTATCCTGACACGAGGCCTCCAACCCCTCCTACCATTGATATCAGTATGATGATTACTAGCCAACTTAACCAACATGGCCCTGCCCCCAACCACCAACCTG
|
|
1504
|
+
i galGal2.chrM C 0 C 0
|
|
1505
|
+
s monDom4.chrUn 117161133 1649 + 174229318 CATTTCTTCTATTTGACTTAGAAATTGCCCTGTTACTACCCCTACCATGAGCTATTCA----ACTGCCCAACCCGTTCATTATACTAGCACTATCTTACTGCCTTATTATCTTGCTCACAGCTGGCCTAGCCTATGAGTGGTTACAAAAAGGCCTAGAATGGGCCGAAT---AGGTATTTAATCTAA-T-T--AAGATAGTTGATTTCGACTCAACTAATCATGGTTTTAACCCATGACTACCTT-A-TAGAACAAATTAACCTAAATATAATCACAGCTTTTACTATTGCACTCATAGGAGTCCTAACCTATCGCTCACACCTAATATCTACCTTACTATGCCTAGAAGGAATAATACTATCACTATTTATTCTAATAGTATTATTAATTTCCCACTCCCATATAGTATCCATATCAATGGCACCTTTAATCCTACTAGTATTCTCTGCTTGTGAAGCAGGGGTTGGTTTGGCCTTGCTTGTGACCATCTCACATACCTATGGGAATGACTATGTTCAAAATTTAAATCTCCTACAATGCTAAAAATTTTAATACCTACTATTATATTAATCCCGCTAACTTGATT---CTCAAAAAAACCCTGAC---TATGGGTTAATACAACCTCATATAGCCTTATTATTGCCATTAGCAGCCTGATACTATTATATCATAGCATAGATATAGGTTACAATTTTAATGGTTCTT---TTTCTATAGATACCTTATCAGGACCTCTGCTAATTCTCTCTTGCTGACTACTTCCCTTAATAATTATAGCAAGCCAAAACCACCTAAATAAAGAATCACTCCTACGAAAAAAACTGTATATTACTTTATTAATTACTCTTCAACTATCACTAATTATAGCTTTCACCTCATCAGAATTAATTATATTCTATATTTTATTCGAAACAACTCTAATCCCAACCCTAATTATTATTACCCGCTGGGGTAATCAAAATGAACGACTTAACGCAGGACTTTACTTTTTATTTTATACATTAGTAGGATCACTCCCACTACTAGTAGCCCTACTAAACTTAAACTACAGCCTAGGATCCATACACATACTAACAAACTTTTTACTAATCAATACACTAGAAC--ATTCAACCTCTAGCACACTAATATGATACGCATGTATGACCGCTTTTATAGTCAAAATGCCACTATATGGGTTGCATCTTTGATTACCAAAAGCACATGTAGAAGCCCCCATTGCTGGATCCATAGTACTAGCTGCAATTCTACTAAAACTAGGGGGTTACGGCATTATACGAATTACAACATTCATCGAACCTATTACTATTCAATTATCCTACCCATTTATTATTTTATCTCTATGAGGGATAATTATAACAAGCTCAATCTGCCTACGTCAAACAGACCTAAAATCACTAATTGCCTACTCATCAGTTAGCCACATAGGCTTAGTAATCGTAGCAGCACTAATACAAACAACCCTTAGTTTTATAGGCGCCACTGTATTAATAATTGCCCATGGCTTGACATCTTCAATATTATTCTGCTTAGCCAATACTAACTATGAACGAATCCACAGTCGCACTATAATCCTAGCACGAGGGTTACAAATGATTCTACCACTAATATGCACATGATGATTGCTAGCTAGCCTAGCTAACCTAGCTTTACCTCCTTCAATTAATTTA
|
|
1506
|
+
i monDom4.chrUn C 0 C 0
|
|
1507
|
+
s echTel1.scaffold_181343 9049 1649 + 18297 CTTTCCTTTTTTTCGACTTAGAAATTGCTCTTTTACTTCCACTACCATGAGCAATCCA----ATCAAATAACCTTATATTAATATTAAGTATAGCCTTGTTCTTAGTAGTAATCTTATCCCTTGGTCTCGCCTACGAATGAACCCAAAAAGGCTTAGAATGAATAGAAT---TGTTAGTTAGTTTAA-A-T--AAAATGAATGATTTCGACTCATTAGATTATGGTTCT-ACCCATAACTATC-ACA-TGCCCGTTATTTACATTAACCTTATTGCCGCCTTCTTTATAGCCTTTGTAGGTCTCTTAATTTACCGATCACACCTAATATCCTCACTATTATGCCTTGAAGGGATAATATTATCTCTATTTATCCTAAATTCAACCCTCGCTCTAAGCATGCATTTTACTTTATACTCAATGATACCCATTATCCTCTTAGTCTTCGCTGCATGTGAGGCTGCATTAGGCCTATCACTATTGGTTATAGTGTCAAACACCTACGGCCTAGACTATGTCCAAAACTTAAATCTCTTACAATGTTAAAACTTATTATCCCAACCCTTATATTGATCCCCTTAGCATGACT---CTCAAA---CAGCAAAAATTTATGAATCAATACTCTAATATATAGCTTCATACTCACCCCAATCAGCCTACTCTTACTTAATCAAACCTCTGACACAAGCCTAAACATATCTGTCCTAT---TTTTTTCTGACCCATTATCCACCCCTCTTATTATTCTTACCTCATGACTCCTACCATTAATACTTTTAGCTAGCCAATCTCATATATCTAAAGAATCAGAGATTCGAAAAAAATATTATAACACTATACTTATTATCCTCCAACTCTTTCTCTTCTTAACATTTTCAGCAACTGAAATAATACTATTTTATATTTTATTTGAATCAACACTGATTCCTACCCTAATTATTATTACCCGCTGAGGAAATCAAACTGAACGACTAAACGCAGGAGTCTATTTCCTCTTTTATACTCTTATAGGCTCGTTGCCTCTACTAATTGTTCTCATCTACATTTACAATAATTTAGGTACATTAAACCTCCTAATTATACCATATTATATTATACCC-TTACCATTTTTTATGATCCTCTAAACTATTATGGTTAGCCTGCATAATAGCCTTTATAGTTAAAATGCCCCTTTATGGTCTACACTTATGACTACCCAAAGCACATGCAGAAGCTCCTATCGCAGGGTCTATGGTTTTAGCTGCTATTCTCCTTAAATTAGGTGGGTACGGAATAATATGAATTACAATTTTTCTTGACCCAATTACCCTAAATATATCTTATCCATTCATAATACTATCCCTATGAGGTATACTAATAACTAGCTCAATCTGCCTGCGACAAACAGACTTAAAATCCCTCATTGCCTATTCATCTGTTAGCCATATAGCTTTAGTGATTGTAGCTATCCTTATTCAAACCCCTTGAAGCTTTATGGGTGCCTCCACCCTTATAATTGCACATGGCTTGACTTCCTCCATACTATTTACCCTAGCTAACACAAACTATGAACGTACTCACAGCCGTACTATAATTCTTGCTCGAGGTTTGCAAACCATACTCCCTGTAATAGCTTCATGATGAATTTTAGCCAGCCTAACCAATCTAGCTCTCCCCCCTACAATTAATTTA
|
|
1508
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1509
|
+
s loxAfr1.scaffold_36650 12642 1649 + 16266 CATTTCTCCTATTTGACCTAGAAATTGCATTACTCCTACCTTTACCCTGAGCCATCCA----AGCTAATAATACAAGTCTAACACTTTTGATATCATTTATATTAATCATTCTCTTAGCTATTGGCTTAGCCTATGAATGACTCCAAAAAGGCCTTGAATGAACCAAATA--TGGTACTTAGTTTAA-A-C--AAAACAAATGATTTCGACTCATTAAACTATGAATAT-A-TCATAATTACCAATA-TGCCCTACATTTACATAAATATTACACTAGCCTTCGTTATTTCACTCATTGGTACCCTCATATACCGCTCTCACCTAATATCTTCGTTACTATGCCTTGAAGGAATAATACTTTCACTATTTACCCTAAACGCACTATTATCCCTCAACATAAACTTCACATTATCTACTACAGTACCACTAATTCTACTAGTATTCGCAGCCTGTGAAGCTGCAGTAGGCTTGGCACTTCTTGTTATAATCTCCAATACCTACGGACTAGACTACGTACAAAACTTAAACCTACTTCAGTGCTAAAAACTATCTTACCAACAATCATACTTATTCCCCTTGCCTGATTTACCTCTAA---CAATATAG---TGTGAATTAATACTACTCTCTATAGCTTTGCAATTAGTCTAACTAGCCTCCACCTGCTCTACCAACCCCTTGACAATAGCCTAAACCTCTCCCCAGAAT---TCTTCTTAGACTCTCTATCTACCCCACTACTAATCCTTACTATTTGACTACTCCCTCTAATACTAATCGCCAGCCAATCCCATCTATCCTCCGGATCAACTTTTCAGAAAAAGTCCTATATCACTACAATTATCCTTTTACAAGTATCCCTAATTATAACATTTGCTGCTACAGACCTAATTCTACTGTACATTATATTTGAAACAACGCTTATCCCAACTATAGTTATCATTACTCGATGAGGAAACCAACTGGAACGATTAAACGCAGGGTCATACTTCCTATTCTATACCCTAATAGGATCTCTCCCCCTACTAGTAACCCTCATGCTAATCCAAAATACCCTAGGGTCATTGAACTTAATAATACTACCATACCTAATTAAACCCATTGACA--ACCTATGATCCACTAATATATTATGACTAACATGTACTATAGCCTTCATAGTAAAAATACCTCTATATGGTCTCCACCTATGATTACCAAAAGCTCATGTAGAAGCACCAATCGCTGGATCTATAGTATTGGCTGCCATTCTCTTAAAACTAGGAGGGTATGGGATACTACGAATCACCATCCTCTTGGATCCCCTAACAACACACATATATTATCCATTCCTCATACTATCACTATGAGGTATGGTCATATCTAGCTCCATCTGCTTGCGACAAACAGATATGAAATCCCTCATCGCTTATTCTTCAGTCAGCCACATAGCCTTAGTAATCATTGCTATTATACTTCAAACACCATGAAGTTTCATGGGGGCACTTACCCTAATAATCGCCCACGGCCTAACTTCCTCAATACTTTTCTGTCTAGCAAATTCAAACTACGAGCGCATTCACAACCGAACTATAATTTTAGCACGAGGCTTACAAACTCTTCTCCCACTAATAGCTACATGATGACTACTAGCTAGCTTAATTAACATGGCCCCACCACCCACTATTAATTTA
|
|
1510
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1511
|
+
s dasNov1.scaffold_23239 13470 1650 - 16977 CATTCTTACTATTCGACCTAGAAATTGCATTACTACTTCCCCTCCCATGAGCCACACA----AGCAAATACTATAACACCTATACTAACGACagccctagtattaatcctactcctagccctaggtctagccTACGAATGACTACAAAAAGGACTAGAGTGAAACGAATA--TAGTAGCTAGTTTAACA-C--AAAATAATTGATTTCGACTCAATAGACTATGATTAA-CCTCATAGCTACCAA-A-TGCCATCAATCTACTTAAACATTATTATAGCATTCTCCATCGCCATAGTAGGAGTACTAGTATATCGCTCACACATAATATCATCCCTACTATGTTTAGAAGGCATAATACTATCCCTCTTTATCCTAAGCACCCTTATAATCCTAAGCATACACTTTACAATAGCTATGATAATACCAATTATTCTTATAGTATTTGCCGCATGCGAAGCAGCAGTAGGACTGGCTCTGCTAGTCATAGTATCCAACACATACGGCCTAGACCACGTCCAAAATCTTAACCTCCTGCAATGCTAAAACTAATTATACCCACTATTATACTCATCCCTCTAACATGACT---ATCAAAAAAGAACATAG---TCTGAATTAACTCAACCACACACAGCATTTTAATTAGCTTGATTAGTCTTTCCATGCTTTTCCAAACAACAGACTCCAATATAAACTTTTCTCTAATAT---TTTTCGCGGATCCTCTATCAACACCACTTATTATCTTAACAACTTGACTGCTCCCACTAATAATCATTGCCAGCCAATCTCACCTTATCAAAGAAACAACAACCCGCAAAAAACTATATATCTCTATACTAATTACTCTTCAAGCACTCTTAATCATAACATTTTCCGCCACAGAACTAATTCTATTTTACATCTTATTTGAAGCCACACTAATTCCAACCCTTATCCTCATCACACGATGAGGAAACCAAACAGAACGCCTGAACGCAGGATTCTACTTTCTATTTTATACATTAGCAGGATCCCTACCCCTCCTAGTAATCCTATTATATATGCAAAACACAATAGGCTCACTAAACATATTACTCATCCAGTATTTTCCCCAAACACTCACAC--ACACCTGAACAGCCAAACTTATATGATTAGCATGCATAATAGCATTCATAGTAAAAATACCACTATATGGCTTACACCTTTGACTACCAAAAGCACACGTAGAAGCACCAATCGCAGGATCAATAGTCCTGGCAGCTATTCTACTAAAGCTTGGCGGCTATGGCATAATACGAATCACAATAATTCTAGAACCAACTACAACATCCATGTCCTATCCATTCATAATACTTTCTCTATGAGGCATAGTAATAACAAGCGCAATTTGCCTACGACAAACGGACTTAAAATCACTAATTGCATACTCATCCGTAAGCCACATAGCTCTAGTAATTATAGCTATCCTAATCCAAACACCCTGAAGCTATATAGGCGCAACAGCCCTAATAATTGCCCACGGTCTCACATCATCAATACTATTCTGTCTAGCAAATACTAATTACGAACGAACTCACAGCCGCACCATAATTCTAGCCCGGGGTTTACAAACATTATTACCCCTAATAGCCTCATGATGACTACTAGCCAGCCTAACTAACCTAGCCCTACCCCCTACAATCAACTTA
|
|
1512
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1513
|
+
s canFam2.chrM 9676 1649 + 16727 CATTTCTGCTTTTCGACCTAGAAATTGCACTCCTACTCCCACTTCCCTGAGCGTCACA----AACCAACAAGCTAACAACAATACTTATCATAGCACTCCTACTAATCTCCCTCCTAGCTGCGAGCCTAGCGTATGAATGGACCGAAAAGGGGCTAGAATGAACCGAATA--TGATAATTAGTTTAA-G-CCAAAAACAAATGATTTCGACTCATTAGATTATGATTTA-TCTCATAATTATC---A-TGTCCATAGTATATATTAATATCTTTCTGGCATTCATTCTTTCTCTAATAGGTATACTTGTTTATCGATCACACCTAATATCATCGCTACTATGCTTAGAGGGCATAATATTATCACTATTTGTAATAATATCTGTAACTATTCTCAACAATCACCTCACATTAGCCAGCATGATACCAATCGTACTACTAGTATTTGCTGCCTGCGAAGCAGCATTAGGACTATCTCTACTAGTTATAGTATCTAACACCTACGGGACTGATTACGTACAAAACCTAAACCTTTTACAATGCTAAAAATTATCATCCCTACTATCATACTAATCCCCCTTACATGAAT---ATCAAAGCCTAACATAA---TCTGAATTAACACGACAACATATGGTTTGCTAATCAGCTTAATCAGCTTATTCTACCTAAACCAACCAAATGATAATACATTGAACTCCTCCTTAATAT---TTTTCTCTGATTCCCTATCGGCACCACTATTAGCACTCACAACATGACTTCTGCCCCTTATACTTATAGCAAGTCAACACCATTTATCAAAAGAACCCTTAACTCGAAAAAAACTATATATTTCAATACTAATTCTTCTCCAATTGTTCCTAATTATAACTTTCACAGCCTCTGAACTCATCTTCTTTTACATCCTATTTGAAGCAACACTGATTCCGACCCTGATCATTATTACCCGATGAGGAAATCAAACTGAACGACTAAACGCAGGACTCTACTTCTTATTTTATACTTTAATAGGATCCCTCCCACTCCTAGTAGCTCTCCTTTATATCCACAATTTCATGGGCTCCCTAAATTTTCTCATAATTCAATACTGAATCCAGCCTCTGCCAA--ACTCCTGATCTAATATTTTCCTATGACTGGCATGCATAATAGCATTCATAGTAAAGATACCTCTATACGGCCTCCACTTGTGACTACCAAAAGCACACGTAGAGGCCCCTATTGCCGGCTCCATAGTACTTGCCGCTGTACTCCTAAAACTAGGGGGCTATGGCATGATACGAATTACAACCCTACTAAATCCCCTGACCAATTTCATAGCATACCCCTTCATAATATTGTCTCTATGAGGCATAATCATAACAAGCTCTATCTGTCTCCGTCAAACAGATCTAAAATCCCTAATTGCATACTCCTCAGTTAGTCATATGGCACTGGTTATCGTAGCGGTTCTTATTCAAACACCATGAAGTTATATAGGTGCAACAGCTCTAATAATTGCCCATGGTTTAACATCCTCAATACTATTCTGCTTAGCCAACTCCAATTACGAACGAATCCATAGCCGTACTATAATTCTCGCACGAGGACTTCAAACTCTCCTTCCCCTAATAGCAGCCTGATGACTATTAGCAAGCCTCACAAATCTGGCTCTCCCTCCAACAATTAATCTT
|
|
1514
|
+
i canFam2.chrM C 0 C 0
|
|
1515
|
+
s bosTau2.chrM 10003 1650 + 16338 CATTCCTCTTATTTGACCTAGAAATTGCACTCCTCCTACCACTGCCATGAGCCTCACA----AACAGCAAATCTAAACACAATGCTTACCATAGCCCTCTTCCTAATTATCCTCCTAGCTGTAAGCCTAGCCTATGAGTGAACTCAAAAAGGACTAGAATGAACCGAATA--TGGTACTTAGTTTAA-A-AT-AAAATAAATGATTTCGACTCATTAGATTATGATTTA-ATTCATAATTACCAA-A-TGTCTATAGTATACATAAACATTATAATAGCATTCACAGTATCTCTTGTAGGACTACTAATATACCGATCCCACCTAATATCCTCCCTTCTATGCTTAGAAGGAATAATGCTATCCCTATTCGTTATAGCAGCCCTAACAATCCTCAACTCACATTTTACATTAGCTAGCATAATACCTATTATCCTACTAGTCTTCGCAGCCTGTGAAGCAGCCCTAGGTCTATCTCTACTAGTAATAGTATCAAATACATATGGTACTGATTATGTACAAAACCTCAACTTACTCCAATGCTAAAATACATTATTCCAACAATTATACTTATACCCCTAACCTGGTT---ATCAAAAAATAATATAA---TTTGGGTTAACTCCACAGCACACAGCCTTCTAATTAGCTTTACAAGCCTCCTCCTCATAAACCAGTTTGGCGACAACAGCCTTAATTTTTCACTACTAT---TTTTCTCCGACTCCCTATCCACTCCACTACTAATTTTAACCATATGGCTCCTCCCTCTAATACTAATAGCTAGCCAACATCATCTATCAAAAGAAAACCTAACCCGAAAAAAACTATTTATTACTATGCTGATCTCACTACAACTATTCCTAATTATAACCTTTACCGCCATGGAACTAATCTTATTTTATATTCTATTTGAAGCAACACTAGTCCCAACACTCATTATTATTACCCGATGAGGAAACCAAACAGAACGCCTAAACGCCGGACTCTATTTCCTATTCTATACACTAGCTGGCTCCCTACCCCTATTAGTCGCACTAATTTATATCCAAAACACAGTAGGATCCCTAAATTTCCTAATATTACAGTACTGAGTACAACCTGTTCATA--ACTCTTGATCTAATGTCTTCATATGACTAGCATGTATAATAGCTTTCATAGTAAAAATACCACTATATGGCCTCCACCTTTGACTACCTAAAGCTCACGTAGAAGCCCCCATCGCAGGCTCCATAGTCCTTGCAGCAGTTCTACTAAAACTAGGGGGGTACGGTATGCTACGAATCACACTAATTCTAAACCCTATGACCGACTTTATAGCATACCCATTCATTATACTCTCCCTATGAGGCATAATTATAACCAGCTCAATCTGCCTCCGTCAAACGGACCTAAAATCACTCATCGCATACTCCTCTGTAAGCCACATAGCACTCGTTATCGTAGCCATCCTTATCCAGACACCTTGAAGCTACATAGGAGCAACCGCCCTTATGATTGCCCACGGCCTCACATCCTCCATACTTTTCTGTCTAGCAAACTCAAACTACGAACGAATCCACAGCCGAACCATAATTCTAGCTCGAGGCCTACAAACGCTCCTTCCACTAATAGCCACCTGATGACTACTAGCAAGTCTAACCAACTTAGCTCTACCCCCAACAATCAACTTA
|
|
1516
|
+
i bosTau2.chrM C 0 C 0
|
|
1517
|
+
s rheMac2.chr5 34445352 1643 - 182086969 CACTCCTCCTCTTTGACTTAGAGATTGCTGTGCTACTACCCCTGCCATGAGCCCTTCA----AACAACCAACATGACGCTAATAATCAGCACAGCCCTTCTATTAGTTACCATTTCAATCCTAGGCTTGATTTATGAATGAGCCCCAAAAGGGTTAGACTGAGTTGAAT---TGGTAAGTAGTTTAA-GTC--AAAATAAATGATTTTGACTCATTAGATTATGATA---GACCATATTTACCAA-A-TGACCTCTATTAATATCATGATTATATTAGCATACACCATATCACTGCTAGGAGTGTTAGTCTATCAATCCCACCTAATATCATCCCTATTATGCCTAGAAGGCATAATACTATCAATATATATCATAAATACTCTTATAACTTTAAATATAGATTTCACTCTAGCATCCATAATACCCATTATTCTCCTAGTATTTGCTACCTGCGAAGCCGCAATGGGCCTTGCCTTACAAGTTTCAATCTCCAGTGCATATGGCCTAGATTGCATACAAAATCTAACTTTACTTCAATGCTAAAAATTATTATTCCAACAATTATACTGTTACTGATGATATGATT---CTCTAAAAATTCTATAA---TCTGAATCAACATGGTTATCCACAGCCTACTCATCAGCCTCATCAGCCTACTATTTTTTAACCAATTCAGCAAT-ACTCGTCCAACTTCTTATTAATAT---TT---TCTGACCTGCTGACATCACCCCTTCTAATCTTAACAGCCTGACTACTGCCTCTTATAATTCTAGCAAGCCATTATCACCTGTCCAATGAATCACCCCCATGAAAAAAATTATATATTTCTATATTGATTTCCCTACAGATGTTTTTAATCATGGCATTCACTGTCACAGAACTAATTATATTTTATATCCTCTTTGAAGCCACACTAGTTCCTACCCCAATTATCATCACTCACTGGGGCAACCAACCAGAACGCCTCAATGCAAGCTCATACTTCTTATTTTACACACTAGTAGGATCCCTTTCTTTACTTGTAACACTTGTTTATACTCAAAATACCTCAGGTTCACTAAATATGCTAGTAATAATACTTACTATCCAAGAGTTATTAA--CCTCCTGATCCAACAATCTTATATAACTAGCATGTATCATGGCCTTCATAGTAAAAATACCTCTATATGAACTTCACCTATGACTCTCCAAAGCCTATGTAGAAGCCCCTATTGCCAACTCAATAGTACTTGCAGCAGTACTCCTAAAGCTAGGCAGGTGCGGTGTAATACGGCTTACTCTTATCCTCAACCCCGTAACAGAACATATAGCCTACCCTTTCCTCATGTTGTTCCTATGAGGAATAGTTATGACAAGCTCTATTTGTCTATGACAAACTAATCTAAAATCACTTATTGCCTACTCTTTCATAAGCCACATAACACTTGTTATTATGGCTATCCTCATTCAGACCCATTGAAGCTTTAGAGATGCAATCACCCTTATAATTGCTCATGGACTCACTTCATCCTTACTCTTCTGCCTAGCAAATTCAAACTACGAGCGAGTCCATAGCCAAACCATATTGCTTACCCAAGGCCTTCAAACACTGCTCCCACTAATAGCCTCTTGATGATTTCTGGCAAATCTAACTAACCTTGTCTTACTCCCTACCATTAATCTA
|
|
1518
|
+
i rheMac2.chr5 M 987 C 0
|
|
1519
|
+
s panTro2.chrM 9657 1645 + 16554 CCTTCCTATTATTTGACCTAGAAATTGCCCTCCTATTGCCCTTACCTTGAGCCCTACA----AACGGCCAACCTACCACTAATAGTCACATCATCCCTCTTATTAATTACTATCCTAGCCCTAAGCCTCGCCTACGAATGATTACAAAAAGGGTTAGACTGAACCGAAT---TGGTATATAGTTTAA-A-T--AAAACGAATGATTTCGACTCATTAAATTATGATA----ATCATATTTACCAA-A-TGCCCCTTATTTATATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCTAATATCTTCCCTACTATGCCTAGAAGGAATAATACTATCACTGTTCATCATAGCCACCCTCATAACCCTCAATACTCACTCCCTCTTAGCCAATATTGTACCCATCACCATACTAGTCTTTGCTGCCTGCGAAGCAGCAGTAGGTCTAGCACTACTAGTTTCAATCTCTAACACATATGGCTTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATCATCCCGACAATTATATTACTACCACTAACATGATT---CTCTAAAAAACGTATAA---TTTGAATCAACACAACCACTCACAGCCTAATTATCAGCACCATTCCCTTACTATTTTTTAACCAAATTAACAACAACCTATTCAGCTGTTCCCTGCCCT---TCTCCTCCGACCCCTTAACAACTCCCCTCCTAATATTAACTGCTTGACTTCTACCCCTCACAATCATAGCAAGCCAGCGCCACCTATCCAACGAACCACTATCACGAAAAAAACTCTACCTCTCCATGCTAATTTCCCTCCAAATCTCCTTAATTATAACATTCTCGGCCACAGAGCTAATTATATTTTATATCTTCTTCGAAACCACACTTATCCCCACCCTGGCTATCATCACCCGATGGGGTAACCAACCAGAACGCCTGAACGCAGGTACATACTTCCTATTCTATACCCTAGTAGGCTCCCTCCCCCTACTCATCGCACTAATCTATACCCACAACACCCTAGGCTCACTAAATATCCTATTACTCACTCTTACAACCCAAGAACTATCAA--ACACCTGAGCCAACAACTTAATATGACTAGCGTACACGATGGCTTTCATGGTAAAAATACCCCTTTACGGACTCCACCTATGACTCCCTAAAGCCCATGTCGAAGCCCCTATTGCCGGGTCAATGGTACTTGCTGCAGTACTCTTAAAATTAGGTGGCTATGGCATAATACGCCTCACACTCATCCTCAACCCCCTAACAAAACATATAGCCTATCCCTTCCTCATGTTGTCCTTATGAGGTATAATCATAACAAGCTCCATCTGCCTGCGACAAACAGACCTAAAATCGCTCATTGCATACCCTTCAGTCAGCCACATAGCCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGCAATTATCCTCATAATCGCCCACGGACTTACATCCTCATTATTATCCTGCCTAGCAAACTCAAATTATGAACGCACCCACAGTCGCATCATAATTCTCTCCCAAGGACTTCAAACTCTACTCCCACTAATAGCCTTTTGATGACTCCTGGCAAGCCTCGCTAACCTCGCCCTACCCCCTACCATTAATCTC
|
|
1520
|
+
i panTro2.chrM C 0 C 0
|
|
1521
|
+
s hg18.chrM 10240 1645 + 16571 CCTTCTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTACCATGAGCCCTACA----AACAACTAACCTGCCACTAATAGTTATGTCATCCCTCTTATTAATCATCATCCTAGCCCTAAGTCTGGCCTATGAGTGACTACAAAAAGGATTAGACTGAGCCGAAT---TGGTATATAGTTTAA-A-C--AAAACGAATGATTTCGACTCATTAAATTATGATA----ATCATATTTACCAA-A-TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCTCATATCCTCCCTACTATGCCTAGAAGGAATAATACTATCGCTGTTCATTATAGCTACTCTCATAACCCTCAACACCCACTCCCTCTTAGCCAATATTGTGCCTATTGCCATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTACTACCACTGACATGACT---TTCCAAAAAGCACATAA---TTTGAATCAACACAACCACCCACAGCCTAATTATTAGCATCATCCCCCTACTATTTTTTAACCAAATCAACAACAACCTATTTAGCTGTTCCCCAACCT---TTTCCTCCGACCCCCTAACAACCCCCCTCCTAATACTAACTACCTGACTCCTACCCCTCACAATCATGGCAAGCCAACGCCACTTATCCAGCGAACCACTATCACGAAAAAAACTCTACCTCTCTATACTAATCTCCCTACAAATCTCCTTAATTATAACATTCACAGCCACAGAACTAATCATATTTTATATCTTCTTCGAAACCACACTTATCCCCACCTTGGCTATCATCACCCGATGAGGCAACCAGCCAGAACGCCTGAACGCAGGCACATACTTCCTATTCTACACCCTAGTAGGCTCCCTTCCCCTACTCATCGCACTAATTTACACTCACAACACCCTAGGCTCACTAAACATTCTACTACTCACTCTCACTGCCCAAGAACTATCAA--ACTCCTGAGCCAACAACTTAATATGACTAGCTTACACAATAGCTTTTATAGTAAAGATACCTCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGAAGCCCCCATCGCTGGGTCAATAGTACTTGCCGCAGTACTCTTAAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTACGACAAACAGACCTAAAATCGCTCATTGCATACTCTTCAATCAGCCACATAGCCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGCAGTCATTCTCATAATCGCCCACGGACTCACATCCTCATTACTATTCTGCCTAGCAAACTCAAACTACGAACGCACTCACAGTCGCATCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCACTAATAGCTTTTTGATGACTTCTAGCAAGCCTCGCTAACCTCGCCTTACCCCCCACTATTAACCTA
|
|
1522
|
+
i hg18.chrM C 0 C 0
|
|
1523
|
+
s oryCun1.scaffold_140182 9807 1649 + 20791 CATTTTTACTTTTTGACCTAGAAATTGCTCTCCTACTCCCACTCCCATGAGCCGCACAATTTAATAATTTAAACCT----AGTCCTCATCATAGCACTTATGTTAATCTCAATCTTAGCCCTTGGATTAGCCTACGAATGAATCCAAAAAGGACTAGAATGAGTTGAATA--TGATAATTAGTTTAG-T-T--AAAATAAATGATTTCGACTCATTAGACTATGGTAA--GACCATAATTATCAAAA-TGCCTTCAATCTATATTAATATTTTCCTAGCATTTATCCTAGCTCTTCTAGGCATACTAGTCTATCGATCCCATCTAATATCATCCCTTCTATGCCTAGAAGGCATAATACTCTCACTATTTGTTCTAATTACATTAACAGCCCTTAATACCCACTTCACACTATCATTTATATTTCCAATCATCCTACTAGTATTCGCAGCCTGTGAAGCAGCAGTTGGACTAGCTCTTCTAGTTATAGTCTCCAACACTTATGGAATAGACTATGTACAAAACCTAAATCTTCTACAATGCTAAAAACTATTATCCCCACAATCATACTTATTCCAACCGTATGGTG---ATCAAAACCCCATATAA---TTTGAATTAACGCAACAGTTTACAGCCTATTAATTAGCCTAACTACCCTCTCTCTACTTAATCAGCCAAGTGACACCAACCTAAACTTCTCAACCACAT---TTTTTTCAGATGCCTTATCCACTCCTCTCCTGATGTTAACGACCTGACTTCTTCCACTCATAATCTTAGCAAGCCAACATCACTTAGACAAAGAAACCTTAACCCGTAAAAAAATTTATATTTCTCTTTTAATTTCCTTACAAGTATTCCTAGTAATAACATTTTCAGCCACAGAATTTATCCTGTTTTATATTCTATTTGAAGCCACACTGATTCCCACTCTTATCATTATTACACGATGAGGTAATCAAACAGAGCGACTCAACGCAGGAACCTACTTCCTATTTTATACCCTCATAGGATCCCTCCCCCTTCTAGTGGCTCTAATTTATTTACAGAACTCTATAGGATCTCTAAACTTCCTCCTACTTCAACTTATAAATAAATCCATTACAA--CATCGTGATCAAACTCACTGATATGACTAGCATGCATAATAGCATTTTTAGTCAAAATACCCTTATATGGGCTTCACCTGTGATTACCAAAAGCTCACGTTGAAGCCCCCATCGCTGGCTCAATAGTCCTGGCAGCTATTCTACTTAAACTAGGCGGCTACGGAATAATACGCATTACCATCCTACTCAGCCCTATTACAGACTATATAGCCTACCCATTCCTCATACTCTCCCTCTGAGGCATAATTATAACCAGCTCTATCTGTCTCCGGCAAACAGACCTCAAATCACTCATTGCTTATTCATCAGTGAGCCACATAGCCCTAGTAATCGTAGCCATCCTTATTCAAACACCATGAAGCTTTATAGGCGCCACCGCTCTAATAATCGCACATGGCCTTACTTCCTCATTATTATTCTGCCTAGCCAATTCCAACTACGAGCGCATTCACAGCCGAACCATACTACTAGCCCGAGGCCTACAGACTATTCTTCCGCTAATAGCAGCATGATGACTAGTTGCTAGCCTTACCAACCTGGCCCTACCTCCAACTATTAATCTG
|
|
1524
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1525
|
+
s rn4.chrM 9616 1653 + 16300 CATTTCTACTATTCGACCTAGAAATCGCCTTACTACTTCCCCTCCCATGAGCGATTCA----AACAACCAATACCACTACAATAATAGCAACTGCCTTTATTTTAGTCACTATTTTGTCTCTTGGCCTAGCCTACGAATGAACACAAAAAGGACTAGAATGAACAGAATAATTGGTAATTAGTTTAA-A-T--AAAATTAATGATTTCGACTCATTAGATTATGATAAT-AATCATAATTACCAACAATGACATCTGCTTTCCTAAATTTAACTATAGCCTTTACATTATCTCTACTAGGTACTTTTATATTTCGCTCCCACCTAATATCCACTCTCCTCTGCCTAGAAGGAATAATACTATCACTATTTGTCATAACTTCAACATCCACATTAAACTCCAACTCCATAATCTCCATAACCATCCCAATTACCATTCTAGTTTTTGCAGCCTGCGAAGCAGCAGTAGGTTTAGCCTTACTAGTAAAAATTTCAAATACTTACGGAACAGACTACGTACAAAACCTCAACCTTCTACAATGTTAAAAATTATTTTCCCATCTATCATACTCCTCCCACTAACATGACT---CTCAGCCAACAAAAAAA---TCTGAACCAATGTCACCTCCTACAGCTTTCTAGTGAGCCTATTAAGCTTATCACTCCTATGACAAAATGACGAAAATTACCTAAATTTCTCAGTTATAT---TCTCCTCCGATCCATTATCCACCCCACTAATCATTCTAACAACTTGACTCCTCCCACTAATAATGCTCGCTAGCCAAAATCACATAAAAAAAGAAAATATAATGCATCAAAAACTTTACATCTCAATACTTATTAGCCTCCAAATTTTACTCATCATAACATTCTCCGCAACAGAACTAATTTTATTTTATATCCTGTTCGAGGCCACTCTAATCCCAACACTAATTATCATTACACGATGAGGCAACCAAACAGAACGCTTAAATGCAGGAATTTATTTCCTGTTTTATACACTAATTGGCTCCATCCCACTCTTAATTGCCCTCATTTCAATCCAAAACTCAATAGGAACACTCAACTTCCTAATCCTTTCCCTCACAACACACCCCCTACCCT--CAACATGATCCAACACCATTCTATGACTAGCATGTATAATAGCATTTATAATCAAAATACCATTATACGGAGTCCATCTATGATTACCAAAAGCCCACGTAGAAGCTCCAATTGCAGGCTCTATAATTTTAGCAGCAATTCTCCTAAAGCTAGGGGGTTATGGGATAATACGAGTTTCCATCATTCTAGACCCCCTAACAAAATCTTTAGCCTACCCATTCATCATCCTCTCATTATGAGGCATAATTATAACTAGCTCAATCTGCCTACGCCAAACAGATCTAAAATCATTAATTGCTTACTCATCAGTAAGCCATATAGCCCTAGTCATCACAGCCATTATAATCCAGACACCATGAAGCTTCATGGGAGCCACAATACTAATAATCGCCCACGGCTTAACCTCATCACTCTTATTCTGCCTAGCAAACACCAACTACGAACGAATTCACAGCCGAACTATAATTATAGCTCGAGGATTACAAATAATCTTTCCATTGATAGCAACATGATGACTATTAGCAAGCTTAGCCAACCTAGCACTACCACCCCTAATTAACCTC
|
|
1526
|
+
i rn4.chrM C 0 C 0
|
|
1527
|
+
s danRer4.chrM 10773 1653 + 16596 TATTCCCTTTATTTGACTTGGAAATTGCTCTCCTATTACCACTCCCATGAGGAGATCA----ACTTAATAACCCAATAGAAACTCTCTTTTGAGCTATAACAGTACTGATTTTGCTAACACTAGGACTAGCCTACGAATGAGCCCAAGGCGGCCTTGAATGAGCAGAGT---AGGGAGCTAGTCCAA-A-GA-AAGACCCTTGATTTCGGCTCAAATAATTGCGGTGTAAACCCGTAACTCCCTT-A-TGACACCCACGCACTTTAGTCTTAACGCAGCATTTATACTAGGCTTAGCAGGACTTACATTTCACCGTGTTCACCTCCTATCAGCATTATTATGTTTAGAAGGCATAATATTATCTTTATTTATTTCCATAGCCCTTTGAACTTTAAAAACAGAGTCAATAAGTTTATCCACAGCCCCTATACTACTACTAGCCTTTTCTGCCTGTGAAGCAAGTGCCGGCCTAGCACTCCTAGTAGCCACAGCTCGAACCCACGGATCTGACCACATAAAAAACCTTAATCTACTACAATGCTAAAAGTACTGATCCCCACTATTATGCTATTCCCTACAATCTGATT---ATCTTCATCAAAATGAC---TGTGAACAACTACAACAATAAACAGCTTTTTAATTGCCTTTATTAGCTTAACATGACTAAAATGAACCTCGGATACAGGGTGAAATGCTTCTAACTCGTACATAGCTGCAGACCCACTATCAACACCTCTTCTAGTACTAACCTGTTGACTTCTTCCATTAATGATTCTAGCTAGCCAAAATCACATCAACTCGGAGCCTGTAAACCGACAACGAATATACATTACACTTCTTGCCTCTTTACAAACTTTCATAATTATGGCGTTTGGCGCTACAAAAATCATTATATTCTACATTATATTCGAAGCTACACTTATCCCAACACTAATCATTATTACCCGATGAGGTAATCAAGCTGAGCGCCTTAACGCAGGTACTTACTTTCTTTTCTATACATTAGCAGGCTCTCTACCTCTTTTAGTAGCCCTCCTATTACTGCAACAATCAACAGGAACCCTATCAATACTAGTACTTCAGTACTCAGACCCACTTTTACTTA--ACTCTTGAGGACATAAAATCTGATGAGCCGGCTGCTTAATTGCATTCCTAGTAAAAATACCGCTATATGGGATACACCTTTGATTACCAAAAGCACATGTAGAAGCCCCTGTAGCAGGATCTATAATTCTAGCGGCAGTGCTACTAAAACTAGGAGGCTACGGTATGATACGAATAATAGTAATATTAGATCCTTTATCTAAGCAACTAGCATACCCGTTTATTATCCTTGCTCTATGAGGAGTAATCATAACAGGATTAGTTTGTCTACGACAAACAGACTTAAAATCGCTAATTGCCTATTCATCAGTAGGCCATATGGGACTAGTTGCAGGAGGAATTTTGATTCAAACCCCCTGAGGATTTACAGGAGCAATTATTTTAATAATCGCCCACGGACTAACCTCATCCGCCCTATTTTGCTTAGCTAACACATCGTATGAACGAACTCATAGCCGGACCATAATCCTCGCTCGAGGACTCCAGATAGTGCTACCGCTAGCAACAGTATGGTGATTTATTGCTAATCTGGCCAACCTAGCACTTCCACCTCTACCAAACTTG
|
|
1528
|
+
i danRer4.chrM C 0 C 0
|
|
1529
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1530
|
+
|
|
1531
|
+
a score=1795914.000000
|
|
1532
|
+
s mm8.chrM 11291 679 + 16299 ATAGGAGAATTATTCATTACCATATCATTATTTTCTTGATCAAACTTTACCATTATTCTTATAGGAATTAACATTATTATTACAGGTATATACTCAATATACATAATTATTACCACCCAACGCGGCAAACTAACCAACCATATAATTAACCTCCAACCCTCACACACACGAGAACTAACACTAATAGCCCTTCACATAATTCCACTTATTCTTCTAACTACCAGTCCAAAACTAATTACAGGCCTGACAATAT-GTGAATATAGTTTACA-AAAAACATTAGACTGTGAATCTG-ACAACAGGAAATAA--ACCTCCTTATTCACCAAGA--------AAGAT-T---------GCAAGAACTGCTAATTC-ATGC-T-TCCATGTTTAAAA-ACATGGCTTTCTT--------ACTTTTATAGGATAATAG-TA-ATCCATTGGTCTTAGGAACCAAAAAC-CTTGGTGCAAATCCAAATAAAAG----TA------ATCAATA---------TTTTCACAA---CCTC---AA---TCTTATTAATCTTCATTCTTCTACTATCCCCAA---TCCT----------A----ATTTCAATATCAAACCTAA-TTAAACACATCAACTTCCCAC-------TGTACAC-CACCACATCAATCAAATTCTCCTTCATTATTAGCCTCTTACCCCTATTAATATTTTT-CCACAATAATATAGAATATATAATTACAACCTGGCACTGAGTCACCATAAATTCAATAGAACTTA
|
|
1533
|
+
s galGal2.chrM 12610 692 + 16775 ATAGCAGAACTAACAATTATAGTTGCCCTCTTCAACTGATCCTCCCCCACAATTATCTTAACCGGCACTGCAACACTCCTAACCGCCTCTTACACCCTCTACATACTACTCTCAACCCAACGAGGCACTCTTCCATCCCACATCACAACAACCCCCAACTCAAACACTCGAGAACATCTTCTCATAACCCTCCACATCATCCCCATACTAACACTCATCCTCAAACCAGAACTAATCTCAGGAACCCCTCTAT-GCAAACATAGTTTAAC-CCAAACATTAGATTGTGATTCTA-AAAATAGGAGTTTA-ACCCTCCTTGTTCGCCGAGGGGAGGCCCAAGCC-A---------GCAAGAACTGCTAATTC-CTGC-A-TCTGAGCTTTAAA-CCTCAGTCCCCTT-A------ACTTTTAAAGGATAAGAG-CA-ATCCGTTGGTCTTAGGAACCACCTAT-CTTGGTGCAAATCCAAGTAAAAG----TA------ATGGAGACTCCACTGCTCCTTAACA---CCCT---CA---CAACATTAACACTACTCACCCTCCTTACCCCTA---TTAT----------CCTTCCCC-------CCCTCCTAAATCTAAAAAA--CTCCC-CCAT------ATCCAT---CACCAAAACCATTAAAACCGCCTTCCTAATCAGCCTAATCCCAACAACAATCTTCAT-CCACTCAGGGGCAGAAAGCATTGCCACCCACTGAGAATGACAATTTATCCCCAACTTCAAGATCC
|
|
1534
|
+
i galGal2.chrM C 0 C 0
|
|
1535
|
+
s monDom4.chrUn 117162782 683 + 174229318 CTAGGAGAACTCATAGTTATTATTTCATCATTCTCATGATCAAACTGATCCATCCTACTACTAGGATTAAACACAGTCATTACAGCCTTATATACACTATACATACTGATTACCTCCCAACGGGGTAAATTTACACACCACTTAAACCCACTTCATCCTACAATAACACGCGAACATATACTGATAACTCTCCATATACTACCACTCCTAATTATCTCATTAAATCCAAAATATATTTTAGGTACCACATTTT-GCAAATATAGTTTAAC-AAAAACATTAGATTGTGAGTCTA-AATATAGAAGTTTA-AACCTTCTTATATGCCGAGA--------AAGAC-T----------CAAGAACTGCTAACTC-TTGTAC-TCCATACCTAATA-GTATGGCTTTCTT--------ACTTTTAAAGGATAAAAG-CT-ATCCGTTGGTCTTAGGAACCAAAAAC-TTTGGTGCAACTCCAAATGAAAG----TA------ATTAATT---------TTACTTTAAACTCAAT---AA---TCCTATTATCTATCATCATGCTAGTATCACCT----CTAC----------TGTATAACATACTAATACCCCACAAAACAACTTATTTTCCA-ACCT-------ATTGT---AAAAACATAATTATAATA-GCTTTTATAACAAGCCTACCACCCATAATTATCTTTAT-ATTATACGGCCAAGAATCTGTTATTACAAATTGGCATTGATTTTCAATTACTACATTTAACATTT
|
|
1536
|
+
i monDom4.chrUn C 0 C 0
|
|
1537
|
+
s echTel1.scaffold_181343 10698 677 + 18297 ATTGGAGAATTATTAATTATTTCATCATCATTTTCTTGATCAAATATCACTATACTATTTATAGGTCTAAATATATTAATAACCGCTTCTTATACCCTCTATATACTTATTATAACTCAACGAGGGAATGTAAATCCCCATATTAAATCTATACCACCCTCATTTACTCGAGAAAATACTCTAATAGCCCTTCACATACTTCCTCTACTTCTTCTAATGCTTAACCCCAAAATCATTATAGGACCAACTTTCT-GTAAATTTAGTTTAAT-AAAAACATTAGACTGTGACTCTA-AAATTAGGAGGTAA--AGCTCCAAATTTACCAAGA--------AAGAA-----------AAAAGAACTGCTAATTC-TTTA-T-ACCATCCGTAAAA-CTATGGCTTTCTT--------ACTTTTTTAGGATAGAAG-AA-ATCCGTTGGTCTTAGGAACCAAAAA--ATTGGTGCAACTCCAAATAAAAG----TA------ATTAATA---------TAGTATCTA---TCTT---TA---CTCTGTCATCCCTAATTATTCTTTTACTCCCGA---TCAT----------TATATCATTACTAAACTACCCTAACCCCAATTTA--CTGCC-ATCC-------TACGT---AAAACATGCAGTCTCTTACTCATTTTTTCTTAGTATTGTTCCTTTATTATTATTCACATCAACATATCCAGAAACAATA-ATTTCAAACTGACACTGAATATCAATTCACACCTTTAACTTAT
|
|
1538
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1539
|
+
s loxAfr1.scaffold_36650 14291 680 + 16266 ATCGGAGAATTACTTATTATCACAACATCATTTTCATGATCTAATCTCACCATTTTCCCTATAGGACTAAACGTATTAATTACTACAATATATACTCTCCACATAATAACCACAACTCAACGGGGAAAGACATCTCACCACGCTAAATCCATTAAACCTTCATTTACCCGAGAGAACACCTTAATAGCCCTCCATTTTCTACCCCTACTGCTCCTTTCCCTAAACCCCAAGATCATTCTAGGATTAACATATT-GCAGACATAGTTTAAC-CAAAACATTAGGTTGTGGACCTATAAATAAGAATTTAA--TCCTCTTTGTCTACCAAGA--------AAGAA-T---------TAAGGAACTGCTAATCC-CTTA-T-ACCTCATCTAATA-ATGTGGCTTTCTT-A------ACTTTTAAAGGGTAAGAG-CT-ACCCATTGGTCTTAGGCACCAAAAA--ACTGGTGCAACTCCAGATAAAAG----TA------ATCAACC---------TAATCCCAA---CCCT---AA---TACTAACATCACTAATCATTCTAACCCTACCCA---TTAT----------CACAACATTACTACAAAACAACAAGACAAATTGC--TTTCT-ATAT-------ATCAC---CAAAACAGCTGTAACCTACGCCTTCGCAATCAGTCTAATTCCAACTCTGTTATTTAT-TCAATCTAACCAAGAAGCCTATATCTCCAACTGACACTGAATAACAATCCACACCCTAAAGTTAT
|
|
1540
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1541
|
+
s dasNov1.scaffold_23239 15120 679 - 16977 ATTGGAGAACTACTAGTAACCATAACAACATTCAAGTGATCCAACCTAACCATCCTAGCCCTGGGTCTAAACATATTAATCACAGCCTTATACTCCCTATACATACTCATTACTACACAACGAGGTAAATTCACCTACCATACCTATTCAATTAAACCAACATTCACCCGAGAAAGTACCCTGATACTAATACACCTCCTACCCATTATACTACTATCAATTAACCCAAAAATTATCCTCGGGCCCCTATACT-GTGGACATAGTTTACC-CAAAACTCTAGATTGTGAATCTA-GCAACAGAACATAA--AAATTCTTGTTCACCAAGA--------AAGAATT---------GCAGGAACTGCTAACTC-TTGC-C-CCCATACCTAAAA-ATATGGCTTTCTT--------ACTTTTATAGGATAACAG-TA-ATCCACTGGTCTTAGGAACCAGAAA--CTTGGTGCAAATCCAAATAAAAG----TA------ATTAACC---------TAATCATAC---CATT---TT---CTATTATTACTCTTACCATTCTAACTATCCCAA---TCAT----------AATGTCTTACACAAACAAATACAAAACCAAATCG--TACCC-CTAC-------CACGT---TACAACAACCGTGTCATATGCATTTATGACAAGCATAATTCCAACCATAATATTCCT-TCTATCAAACCAAGACTCCTACATTTCAAACTGGCACTGAATAACAATACAAACCATAAAACTAT
|
|
1542
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1543
|
+
s canFam2.chrM 11325 681 + 16727 ATCGGAGAACTATTTGTAGTGATATCCTCATTCTCATGATCCAACATTACTATTATCCTAATAGGAATTAACATTATCATCACCGCCCTATACTCACTTTATATATTAATCACCACACAACGTGGTAAATATTCCCACCATATCAAAAATATCAAACCATCATTCACACGAGAAAATGCCCTAATGACCTTGCACCTACTGCCCCTACTCCTCCTATCCCTTAACCCTAAAATTATTCTCGGTCCCATCTACT-GTAAGCATAGTTTAAC-AAAAACATTAGATTGTGAGTCTA-ACAATAAAAGCTCA-AACCTTTTTGCTTACCGAAA--------AAGTACT---------GCAAGAACTGCTAATTC-ATGC-T-CCCATGCATAAGA-ACATGGCTTTTTC-A------ACTTTTATAGGATAGAAG-TA-ATCCGTTGGTCTTAGGAACCAAAAA--ATTGGTGCAACTCCAGATAAAAG----TA------ATAAATA---------TATTTTCTT---CATG---CA---TAATCACAGCCCTAGTTATTCTTACTTTGCCCA---TCAT----------TATATCCTCTACTAAACTTTACAAGAATAAGCTA--TACCC-ATAC-------TATGT---AAAAACCGCTACTTCTTACGCGTTCATAATTAGCATAATTCCCACAATAATATTCAT-CTACTCAGGACAGGAAACAATCATTTCAAACTGGCATTGAATAACAATCCAAACTATAAAACTAT
|
|
1544
|
+
i canFam2.chrM C 0 C 0
|
|
1545
|
+
s bosTau2.chrM 11653 684 + 16338 ATTGGAGAACTATTTGTAGTAATGTCAACCTTTTCATGATCTAACATTACAATTATTCTAATAGGAGTAAATATAGTAATCACCGCCCTATATTCTCTATACATGCTAATTATAACCCAACGAGGAAAATATACCTACCACATTAATAATATCTCGCCTTCCTTTACACGGGAAAATGCACTCATATCATTACACATCCTACCCCTACTACTCCTAACCCTAAACCCAAAAATTATTCTAGGACCTCTATACT-GTAAATATAGTTTAAC-AAAAACATTAGATTGTGAATCTA-ACAATAGAAACTCATTACCTTCTTATTTACCGAAA--------AAGTA-T---------GCAAGAACTGCTAATTCTATGC-T-CCCATATCTAATA-GTATGGCTTTTTCGA------ACTTTTAAAGGATAGTAGTTT-ATCCGTTGGTCTTAGGAACCAAAAA--ATTGGTGCAACTCCAAATAAAAG----TA------ATAAACA---------TATTCTCCT---CACT---CT---CACTAGTTACTTTACTCTTACTAACTATACCCA---TTATAATAATAAGCTTTAACACCTAC-AAACCTTCCAA---------C--TACCC-ACTC-------TACGT---AAAAACAGCTATCTCATACGCCTTCATTACCAGCATAATTCCCACAATAATATTTAT-CCACTCAGGCCAAGAACTAATTATTTCAAACTGACACTGACTAACCATCCAAACTCTTAAATTAT
|
|
1546
|
+
i bosTau2.chrM C 0 C 0
|
|
1547
|
+
s rheMac2.chr5 34446995 678 - 182086969 GTGGAAGAACTCTTTGTGACTACGGCCTTATTCTCCTGATCAAATATCACTATTACGCTTACAGGACTTAATATACTAATTACAGCCCTTTACTCCCTGTATATGCTAATCTCAACACAACGAGGAACACTTTCATATTATATTAACAGTATGAAACCTTCCTTTACATGAGAAAACACATTAATACTTATACATCTTGTGCCTATCTTACTATTATCCTTAAACCCTAAAATTATTATGTGGTTTGCATGCT-GTAGCTATAGTTTACC-CAAAACATTAGATTGTGGATCTA-ACAATAGAAGCCTG-CAACTTCTTACCTACCAAGA--------AAGTA-T---------GCAAGAACTGCTAACTC-ATGC-C-CCGATGTTTAACA-ACATGGCTTTCTC-A------ACTTTTAAAGGATTAGAA-TT-ATCCGTTGGTCTTAGGAACCAAAAAC-ATTGATGTAACTCCAAATAAAAG----TA------ACAAACA---------TGTAT-CTT---CCAC---GG---CTATCACAGCCCTAATCCCCTTAATCCTACCGA---TTAC----------TGTTACCTTAGCCAACTTCTGCAAAATAGGCTCA--TACCC-AAAT-------TATGT---AAAAACATCTATCGCACGTGCCTTCATCATTAGCCTCATCCCAAAAACAATGTTTAT-ATGCACAGACCAAGAAGCCATTATCTC--ACTGACATTGAATGACGATCCAAACTCTCAAATTCT
|
|
1548
|
+
i rheMac2.chr5 C 0 C 0
|
|
1549
|
+
s panTro2.chrM 11302 681 + 16554 CTAGGGGAACTCTCCGTGCTAGTAACCTCATTCTCCTGATCAAATACCACTCTCCTACTCACAGGATTCAACATACTAATCACAGCCCTGTACTCCCTCTACATGTTTACCACAACACAATGAGGCTCACTCACCCACCACATTAATAGCATAAAGCCCTCATTCACACGAGAAAACACTCTCATATTTTTACACCTATCCCCCATCCTCCTTCTATCCCTCAATCCTGATATCATCACTGGATTCACCTCCT-GTAAATATAGTTTAAC-CAAAACATCAGATTGTGAATCTG-ACAACAGAGGCTCA-CGACCCCTTATTTACCGAGA--------AAGCT-T---------ATAAGAACTGCTAACTC-GTAT-T-CCCATGCCTAACA-ACATGGCTTTCTC-A------ACTTTTAAAGGATAACAG-TT-ATCCATTGGTCTTAGGCCCCAAAAAT-TTTGGTGCAACTCCAAATAAAAG----TA------ATAACCA---------TGTATGCTA---CCAT---AA---CCACCTTAGCCCTAACTTCCTTAATTCCCCCCA---TCCT----------CGGCGCCCTCATTAACCCTAACAAAAAAAACTCA--TACCC-CCAT-------TACGT---GAAATCCATTATCGCATCCACCTTTATCATTAGCCTTTTCCCCACAACAATATTCAT-ATGCCTAGACCAAGAAACTATTATCTCGAACTGACACTGAGCAACAACCCAAACAACCCAACTCT
|
|
1550
|
+
i panTro2.chrM C 0 C 0
|
|
1551
|
+
s hg18.chrM 11885 681 + 16571 CTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCTGATCAAATATCACTCTCCTACTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAAACCCTCATTCACACGAGAAAACACCCTCATGTTCATACACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATCATTACCGGGTTTTCCTCTT-GTAAATATAGTTTAAC-CAAAACATCAGATTGTGAATCTG-ACAACAGAGGCTTA-CGACCCCTTATTTACCGAGA--------AAGCT-C---------ACAAGAACTGCTAACTC-ATGC-C-CCCATGTCTAACA-ACATGGCTTTCTC-A------ACTTTTAAAGGATAACAG-CT-ATCCATTGGTCTTAGGCCCCAAAAAT-TTTGGTGCAACTCCAAATAAAAG----TA------ATAACCA---------TGCACACTA---CTAT---AA---CCACCCTAACCCTGACTTCCCTAATTCCCCCCA---TCCT----------TACCACCCTCGTTAACCCTAACAAAAAAAACTCA--TACCC-CCAT-------TATGT---AAAATCCATTGTCGCATCCACCTTTATTATCAGTCTCTTCCCCACAACAATATTCAT-GTGCCTAGACCAAGAAGTTATTATCTCGAACTGACACTGAGCCACAACCCAAACAACCCAGCTCT
|
|
1552
|
+
i hg18.chrM C 0 C 0
|
|
1553
|
+
s oryCun1.scaffold_140182 11456 680 + 20791 CTAGGGGAACTTCTTATCATTATGGCCTCCTTCTCATGATCTAACCTCACAATCATCCTGATAGGGACTAACGTCCTAATCACGGCCCTCTACTCCCTCTATATACTATCAACCACCCAACGAGGCAAATTCACGTATCACACAAACAACATTTCCCCTACATTCACCCGAGAAAATACTCTTATAGTACTTCACCTAGCCCCACTTCTTCTACTATCAATTAGCCCAAAAATCATCTTAGGCCCAATATTCT-GTAAATATAGTTTAAC-AAAAACATTAGATTGTGAGTCTA-ATAATAGGAGACCG-CACCTCCTTATCTACCGAGA--------ATGTC-T---------GCAAGAACTGCTAATTC-ATGC-T-CCCATGTCTAACC-CCATGGCTTTCTC-A------ACTTTTAAAGGATAGAAG-TA-ATCCGTTGGTCTTAGGAGCCAAAAA--ATTGGTGCAACTCCAAATAAAAG----TA------ATTAACT---------TATTCTCCA---CCTCTGTAG---CTGTATCAATTATTATTTTAGTCCT---CCCTA---TTGT----------GGCCTCTTTCACTAACATTTTTAA--TAGTCCTAACTACCC-TCAC-------TACGT---AAAAACTTCAGTATCTTATGCATTCACTATCAATCTCATTCCAACATTAATTTTCAT-CGCTACTAGTCAAGAAATAATAGTATCCAACTGACACTGAATAACAATTCACACCTTAAAATTAA
|
|
1554
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1555
|
+
s rn4.chrM 11269 680 + 16300 ATAGGCGAGTTATTCATTGTTATAGCAACATTTTCCTGATCGAACCCCTCTATCATCCTTATAGCAACTAACATTGTCATCACAGGAATATACTCAATATATATGATTATCACAACCCAACGAGGAAAACTAACCAGCCACATAAACAACCTCCAACCTTCCCACACACGAGAATTAACACTCATAGCTCTACACATTATTCCCCTCATACTATTAACAATCAACCCTAAACTCATCACAGGCCTAACAATAT-GTAGATATAGTTTACA-AAAAACATTAGACTGTGAATCTA-ACAACAGGAAATCA--AATTCCTTATTTACCAAGA--------AAGTA-T---------GCAAGAACTGCTAATTC-ATGC-A-CCCATACCTAAAACATATGGCTTTCTT--------ACTTTTATAGGATAGAAG-TA-ATCCATTGGTCTTAGGAACCAAAAAC-CTTGGTGCAACTCCAAATAAAAG----TA------ATAAATA---------TAATAACAA---TCCT---AA---TCCTCATAATTCTTGATTTACTTACAACACCAA---TCAC----------A----TTTTCAATAACAATCTTAA-CCAAACTTATGTACTT-CCGT-------CATATGCTCATTACATCAATTAAATTCTCATTCCTCCTTAGCCTCTTACCTTTACTACTATTCTT-CCACCACAACACAGAATACATAATTACTAACTGACATTGACTAACTATTAATTCTATTAAACTTA
|
|
1556
|
+
i rn4.chrM C 0 C 0
|
|
1557
|
+
s tetNig1.chrUn_random 108042749 712 - 171761319 ATAGGGGAACTAATGATTGTCACCTCCGTATTCGGCTGATCGTGATGAACTATCGCCCTAACGGGACTAGGAATATTAATTACCGCAAGCTATTCACTCTACATATTCCTTATAACCCAACGAGGCCCCCTCCCAAGCCACATCATAGCCCTAGAGCCCTCCCACACCCGAGAGCACCTACTAATCGCCCTCCACCTCCTCCCCCTACTCCTACTCATCCTAAAGCCAGAACTTATCTGAGGATGAGCCGTCT-GTAGACATAGTTTAAC-CAAAACATTAGATTGTGATTCTA-AAAACAGAGGTTAA-AACCCTCTTGTCCACCGAGA--------GAGGC-CTG--CTGCAGTGAAGACTGCTAATCT-TCAT-C-CCTTTGGTTAAACTCCAGAGCTCACTC-GCCAAAAGCTTTTAAAGGATAATAG-CTCATCCGTTGGTCTTAGGAACCAAAAACTCTTGGTGCAACTCCAAGTAAAAG-CTATGCACTCCACCCCCT---------TAATCATAA---CATC---AAGCCTTGTCATTATCTTCACCTTACTTATCTACCCAATCCTCAC----------CACACTCTCCCCAAGCCCCCAAAGCCCAGACTGA--GCCTT-AAAA-------CAAGT---CAAAACAGCAGTAAAACTAGCCTTCTTAGTCAGCCTTCTACCTCTTTTCCTCTTCCT-TAATGAAGGTGCTGAAGCCGTAATTACAAACTGAAGCTGAATGAACACCCACACATTTGACATTA
|
|
1558
|
+
i tetNig1.chrUn_random N 0 C 0
|
|
1559
|
+
s danRer4.chrM 12426 699 + 16596 ATAGGAGAACTTATGATTATCACAGCCCTATTTAACTGATCTCCATGAACAATTATTATTACAGGAATAGGAACCTTAATTACAGCAAATTATTCACTTTATATATTTTTAACATCTCAACGAGGCTCAATCCCAGAACACATCACCAATCTTTCACCATCCCACACCCGAGAACATCTCTTAATGACTTTACACCTAATTCCTATCATCTTACTTATATTAAAACCAGAACTTATGTGAGGTTGATGTAACTAGTAAGTTTAGTTTAAAGTAAAATTTTAGATCGTGACTCTA-AAGATAGGGGTTAA-AGCCCCCTCACTCACCGAGG--------AAGAG-TAGGAAAACAGTAAATGCTGCTAATAT-TTAC-CAACCATGGTTAAACTCCATGGCTTCCTT-ACC----GCTTCTAAAGGATAATAG-TACATCCATTGGTCTTAGGAACCAAAAACTCTTGGTGCAACTCCAAGTAGAAGTTTATG------ACTGATA---------TGATCATAC---CTTT---AACATTAATCCTAATTTTCGC----------------AGTTTTAT----------CATACCCCTTATTAAAACCAAAAAGCTATTCAAA--ATCCA-ACAACTCTTTCCAAGC---TTGAAATGCTGTCCATGTATCTTTCTTAATTAGTCTTATCCCACTTACAATGATGCT-GTACAAAGAATCAGACCATGTTGTAATATGCTGAAGCTGAATAAATACACAAGCGTTTAACGTAG
|
|
1560
|
+
i danRer4.chrM C 0 C 0
|
|
1561
|
+
e xenTro2.scaffold_96 2680154 0 - 2855184 I
|
|
1562
|
+
|
|
1563
|
+
a score=3655161.000000
|
|
1564
|
+
s mm8.chrM 11970 741 + 16299 AAATAAGCTTCAAAACTGACTTTTTCTCTATCCTGTTTACATCTGTAGCCCTTTTTGTCAC----ATGATCAATTATACAATTCTCTTCAT--GATATATACACTCAGACCCAAACATCAATCGATTCATTAAATATCTTACACTATTCCTGATTACCATGCTTATCCTCACCTCAGCCAACAACATATTTCAACTTTTCATTGGCTGAGAAGGGGTGGGAATTATATCTTTCCTACTAATTGG---------------ATGATGGTACGGACGAACAGACGCAAATACTGCAGCCCTACAAGCAATCCTCTATAACCGCATCGGAGACATCGGATTCATTTTAGCTA-TAGTTTGATT--------------TTCCCTAAACATAAACTCATGAGAACTTCAACAG-------------------ATTATATTCTCCAACAACAACGACAATCT---AATTCCACTT------ATAGGCCTATTAATCGCAGCTACAGGAAAATCAGCACAATTTGGCCTCCACCCATGACTACCATCAGCAATAGAAGGCCCTACACCAGTTTCAGCACTACTACACTCAAGTACAATAGTAGTTGCAGGAATTTTCCTACTGGTCCGATTCCACCCCCTCACGACTAATAATAACTTTATTTTAACAACTATACTTTGCCTCGGAGCCCTAACCACATTATTTACAGCTATTTGTGCTCTCACCCAAAACGACATCAAAAAAATCATTGCCTTCTCTACATCAAGCCAACTAGGCCTGATAATAGTGACGCTAGGAATAAACCAACCACACC
|
|
1565
|
+
s rn4.chrM 11949 741 + 16300 CTATAAGTTTCAAAATTGACTATTTCTCAATCCTATTCCTATCAGTATCCCTATTCGTAAC----ATGATCAATTATACAATTCTCTTCAT--GATATATACACTCTGACCCCCACATTAACCGATTCATTAAGTACTTAATAATATTCCTGAATAACATACTAATCCTAACCTCAGCTAACAATCTATTCCAACTCTTTATTGGATGAGAAGGGGTAGGAATTATATCCTTCTTATTAATCGG---------------ATGATGATATGGCCTTGCAGACGCCAACACAGCGGCCCTCCAAGCAATCCTCTACAACCGAGTCGGAGACATTGGTTTCATCCTAGCTA-TAACCTGATT--------------CTGCCTAAACATAAACTCCTGAGAACTCCAACAA-------------------ATTTTCTTAACCAACACCAACAACAATCT---AGTCCCTCTC------ACAGGACTACTAATTGCAGCCACAGGAAAATCCGCCCAATTCGGACTTCATCCATGACTCCCATCAGCTATAGAAGGCCCAACTCCCGTCTCTGCCCTACTACACTCAAGCACAATAGTTGTAGCAGGGATCTTCCTAATAATCCGATTCCACCCCCTAACCTCAAACAATAGTACTATTATAACAGCCATACTATGTCTTGGTGCAATCACCACATTATTCACAGCAATCTGTGCTCTCACCCAAAACGACATCAAAAAAATCGTAGCTTTCTCAACATCCAGCCAACTAGGCCTTATAATAGTCACATTAGGGATTAACCAACCCTACC
|
|
1566
|
+
i rn4.chrM C 0 C 0
|
|
1567
|
+
s oryCun1.scaffold_140182 12136 741 + 20791 CAACCAGCTTTAAATTAGATTACTTCTCTATACTATTCACCCCAATTGCACTATTTGTTAC----ATGGTCTATCATAGAATTTTCCATAT--GATATATACACTCAGACCCTAAAATCAACCAATTCTTTAAATACCTACTCATATTTCTTATTACTATACTAATTTTAGTCACCGCTAATAATATATTTCAGCTATTTATTGGATGAGAGGGAGTGGGAATCATATCATTTCTCCTCATCGG---------------CTGATGACACGGGCGAACAGATGCCAATACTGCAGCCTTACAAGCAATCTTATACAACCGCATTGGAGATATTGGCTTTATTATAGCCT-TAGCCTGATT--------------TGCTATTAACCTCAACACATGAGAACTCCAACAA-------------------ATCTTTATTTTAGACAATAACATTACCAT---CCTCCCACTG------ATAGGATTAATTCTTGCCGCCACGGGCAAATCCGCACAATTTGGTCTACACCCATGACTCCCATCAGCTATAGAAGGCCCGACGCCCGTATCAGCCCTACTTCATTCTAGCACAATAGTAGTAGCTGGAGTTTTCCTCCTAATCCGCTTCTACCCCTTGCTAGAAAATAACAAAACTGCCCAAACATTAATCCTATGCCTAGGCGCAATTACTACCTTATTCACAGCCCTATGTGCCCTCACACAAAACGATATCAAAAAAATTGTAGCCTTTTCCACATCAAGTCAACTCGGACTAATAATGGTCACAATCGGAATTAACCAACCACACC
|
|
1568
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1569
|
+
s hg18.chrM 12566 741 + 16571 CCCTAAGCTTCAAACTAGACTACTTCTCCATAATATTCATCCCTGTAGCATTGTTCGTTAC----ATGGTCCATCATAGAATTCTCACTGT--GATATATAAACTCAGACCCAAACATTAATCAGTTCTTCAAATATCTACTCATTTTCCTAATTACCATACTAATCTTAGTTACCGCTAACAACCTATTCCAACTGTTCATCGGCTGAGAGGGCGTAGGAATTATATCCTTCTTGCTCATCAG---------------TTGATGATACGCCCGAGCAGATGCCAACACAGCAGCCATTCAAGCAGTCCTATACAACCGTATCGGCGATATCGGTTTCATCCTCGCCT-TAGCATGATT--------------TATCCTACACTCCAACTCATGAGACCCACAACAA-------------------ATAGCCCTTCTAAACGCTAATCCAAGCCT---CACCCCACTA------CTAGGCCTCCTCCTAGCAGCAGCAGGCAAATCAGCCCAATTAGGTCTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCATCCGCTTCCACCCCCTAGCAGAAAATAGCCCACTAATCCAAACTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGCGCCCTTACACAAAATGACATCAAAAAAATCGTAGCCTTCTCCACTTCAAGTCAACTAGGACTCATAATAGTTACAATCGGCATCAACCAACCACACC
|
|
1570
|
+
i hg18.chrM C 0 C 0
|
|
1571
|
+
s panTro2.chrM 11983 741 + 16554 CCCTGAGCTTTAAACTAGACTATTTCTCCATAACATTTATCCCCGTAGCACTGTTCGTTAC----ATGATCCATCATAGAATTCTCACTAT--GATATATAGACTCAGACCCCAACATCAACCAATTCTTCAAATACTTACTTATCTTCCTAATTACTATACTAATCCTAGTCACCGCTAACAACCTATTCCAACTCTTCATCGGCTGAGAAGGCGTAGGAATTATATCCTTTCTACTCATTAG---------------CTGATGGTACGCCCGAACAGATGCCAACACAGCAGCCATCCAAGCAATCCTATATAACCGTATCGGTGATATTGGTTTTGTCCTAGCCC-TAGCATGATT--------------TCTCCTACACTCCAACTCATGAGATCCACAACAA-------------------ATAATCCTCCTAAGTACTAATACAGACCT---TACTCCACTA------CTAGGCTTCCTCCTAGCAGCAGCAGGCAAATCAGCTCAACTAGGCCTTCACCCCTGACTCCCCTCAGCCATAGAAGGCCCTACCCCTGTTTCAGCCCTACTCCACTCAAGCACCATAGTCGTAGCAGGAATCTTCCTACTCATCCGCTTCTACCCCCTAGCAGAGAATAACCCACTAATCCAAACTCTCACGCTATGCCTAGGCGCTATCACCACCCTATTCGCAGCAGTCTGCGCCCTCACACAAAATGACATCAAAAAAATCGTGGCCTTCTCCACTTCAAGCCAACTAGGACTCATAATAGTTACAATCGGTATCAACCAACCACACC
|
|
1572
|
+
i panTro2.chrM C 0 C 0
|
|
1573
|
+
s rheMac2.chr5 34447673 748 - 182086969 CACTAAGCTTCAAACTAGACTACTTCTCCACAAAATTTACCCCAGTAGCACCACTCATTAC----CTGATCTATTATAGAATTCTCAATAT--GATATATAAATTCAGACCATAACATTCATCAATTTTTCAAG----TACTTATTTTCTTCATCACAATATTAATTCTGGTTACTGCCAACAACCTCTTTCAGCTCTTTATCAGATGGGAAGGTGTAGGAATCATGTCTTTCTTACTAATTAGTAAGAATTACTAATTCTGAAGGTATGGCAGAGCAGATGCTAATACAGCAGCCCTCCAAGCAGTCCTGTACAACCTCATCGGTGATATTGGCTTTATTTTAGCTA-TAGCATTGT-----------------TCATGTCCTCCAACACATGAGAATTTTAACAA-------------------ACATTTTTTCTAGAC-CTCACCCCCAACT---CCTTCCATTA------ATTAGCCTTCTCTTAGCAGCAGCAGAAAAGTCAGCTCAATTCGGCCTCCATCCCTGACTTCCATCTGCCATAGAAGGCCCAGCCCCAGTCTCAGCCCTACTTCACTCCAGCACTATAGTTGCAGCAGGAGTTTTCCTGCTCGTCTGCTTCTACCCTTTAATAGAAAATAACCTATAAATCCAAACCTTTACATTACGTCTGGTAGCTATTACTACCTTATTCACAGTCATCTGTGCTCTAACACAAAATGATATCCAAAAAATCATAGCATTCTCCCCCTCAAGCCATCTAGGCCTTATAATAGTCACAATTGGCATTAATCAGCCACACC
|
|
1574
|
+
i rheMac2.chr5 C 0 C 0
|
|
1575
|
+
s bosTau2.chrM 12337 741 + 16338 CCCTCAGCTTTAAAATAGACTATTTCTCAATAATATTTATCCCAGTAGCACTATTCGTCAC----ATGATCTATTATAGAATTCTCAATAT--GATATATATACTCAGACCCCAATATTAACAAATTCTTCAAATATCTACTCCTATTCCTCATTACTATGCTCATCCTTGTAACCGCAAACAACCTCTTCCAGCTATTCATTGGCTGAGAAGGCGTCGGAATCATATCATTTCTACTCATCGG---------------ATGATGATACGGACGAGCAGATGCAAACACAGCAGCCCTACAAGCAATCTTATATAACCGCATCGGCGACATTGGTTTCATTTTAGCAA-TAGCATGGTT--------------CCTAACAAATCTCAATACCTGAGACCTCCAACAG-------------------ATCTTCATACTAAACCCAAGCG---ACTCAAACATACCCTTG------ATTGGACTAGCATTAGCTGCAACCGGAAAATCCGCCCAATTTGGCCTCCACCCGTGACTTCCCTCTGCAATAGAAGGCCCAACTCCCGTCTCAGCACTACTCCATTCAAGCACAATAGTGGTAGCAGGTATCTTCCTACTAATCCGTTTCTATCCCCTCACAGAAAACAATAAATACATCCAATCTATTACATTATGCTTAGGAGCCATTACCACACTATTTACAGCAATATGCGCCCTCACCCAAAATGACATTAAAAAAATCATCGCCTTCTCCACATCCAGTCAACTGGGCCTTATAATAGTAACTATTGGCATTAACCAACCTTACC
|
|
1576
|
+
i bosTau2.chrM C 0 C 0
|
|
1577
|
+
s canFam2.chrM 12006 741 + 16727 CCATGAGTTTCAAATTAGACTACTTCTCAATAATCTTTGTACCTGTAGCCCTTTTTGTCAC----GTGGTCTATCATAGAATTCTCTATAT--GATATATACACTCCGATCCTTACATTAACCGGTTTTTCAAGTACCTTCTCTTATTCCTCATCACTATAATAGTCCTAGTTACCGCAAACAACATATTCCAACTATTCATTGGTTGAGAAGGAGTTGGCATTATATCATTCCTACTTATTGG---------------ATGATGGTACGGCCGAACCGATGCAAATACAGCCGCCCTACAAGCCGTCCTCTACAACCGTATTGGAGATGTAGGCTTCATTATAACCA-TAGCATGATT--------------TCTACTAAACTTAAACACATGAGACCTTCAACAA-------------------ATCTTCATTACGA---CAAACGATAATTTTAATCTGCCACTA------CTTGGCCTACTACTAGCAGCTACCGGTAAATCTGCTCAATTCGGCCTACATCCCTGACTCCCCTCAGCCATAGAAGGCCCCACTCCTGTATCAGCCCTACTTCACTCAAGCACAATAGTTGTAGCAGGAGTATTTCTTCTTATCCGCTTTCATCCACTAATAGAGCATAACCAAACTATTCAAACCCTCACTTTATGCTTAGGGGCCATTACTACACTATTTACCGCAATCTGCGCTCTTACACAGAATGATATCAAAAAAATTGTAGCGTTCTCTACCTCAAGCCAACTAGGCCTAATAATAGTAACAATTGGCATTAACCAGCCCTACT
|
|
1578
|
+
i canFam2.chrM C 0 C 0
|
|
1579
|
+
s dasNov1.scaffold_23239 15799 738 - 16977 CACTTAGTTTTAAACTGGACTTCTTCTCAATTATCTTTGTATCCGTAGCCCTATTCGTAAC----CTGGTCAATTATAGAATTCTCACTAT--GATATATACACTCAGACCCCTACATCAATCAATTCTTCAAGTACTTACTACTATTCTTAATCACAATAATAATCTTAGTAACAGCAAACAACATATTCCAACTCTTCATCGGATGAGAAGGAGTGGGAATTATATCATTTCTACTTATCGG---------------CTGATGATATGGACGAACAGACGCCAACACCGCAGCCCTCCAAGCAATCCTATATAACCGAATTGGTGACATTGGCTTTATCTTAACCA-TAGCATGACT--------------CCTTCTCCACCTAAACTCATGAGACCTTCAACAA-------------------ATCTTTATACTCAAACCAACCA---ACCT---TCTCCCTCTA------TTAGGACTACTAGTAGCAGCAGCAGGAAAATCAGCCCAATTTGGACTACATCCATGACTCCCTTCAGCTATAGAAGGTCCTACCCCTGTATCAGCATTACTCCATTCAAGTACTATAGTTGTAGCAGGTATCTTCCTATTAGTACGTTTCTACCCACTAATACAAAATAACCCAACCATTCTGACAATAACCCTATGCCTAGGCGCCATCACCACCTTATTTACCGCCATCTGCGCCCTAACACAAAATGATATTAAAAAGATCATTGCCTTCTCAACCTCCAGTCAACTGGGCCTCATAATAGTAACTATTGGCATTAACCAACCCCATT
|
|
1580
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1581
|
+
s loxAfr1.scaffold_36650 14971 741 + 16266 CTATAAGCTTTAAATTAGACTTCTTTTCCCTAACATTCATGCCAATTGCACTTTTTATTAC----CTGATCAATTATAGAATTTTCACTAT--GATATATACACTCAGATCCCCATATTAACCGTTTCTTCAAATACCTCCTGTTATTCCTAATCACTATACTAATTTTGGTAAGCGCTAATAATCTACTGCAACTATTTATAGGCTGAGAAGGAGTTGGCATTATGTCCTTCCTGCTAATCAG---------------TTGATGACATGGACGAACAGACGCTAACACAGCAGCTCTACAAGCAATACTCTATAACCGCATTGGCGATATAGGCTTTATTATAATAA-TAGCCTGATT--------------TACTATCCATTTAAATTCTTGAGAGTTTCAACAA-------------------ATCTTCTTAACTAACCCCAAGAACACTAC---ACTCCCACTA------CTAGGTCTTCTCCTGGCCTCAGCAGGAAAATCAGCCCAATTCGGGCTTCATCCGTGACTTCCATCAGCCATAGAAGGTCCTACTCCAGTATCGGCACTCCTTCATTCCAGTACAATAGTTATAGCTGGAGTATTTACCCTCATCCGCTTTTACCCACTAATAGAAAATAACCTCACTATTCAAACTTCAACACTATGCCTAGGGGCCATTACTACTTTATTTACAGCTATCTGTGCTCTCACACAGAATGACATCAAAAAGATTATCGCACTCTCCACTTCCAGCCAACTAGGCTTAATAATAGTAACCATCGGCATTAATCAGCCACATC
|
|
1582
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1583
|
+
s echTel1.scaffold_181343 11375 738 + 18297 GTTTAAGCTTTAAACTTGACTACTTTTCCCTAATTTTCATCCCTGTAGCCCTCTACGTTAC----CTGATCAATTATACAATTCTCCGTAT--GATATATACACTCTGACCCTAACATTGACCGCTTTTTTAAATATCTTCTTCTATTCTTAATTACTATAATAATCTTAGTTACCGCTAATAATATATTTCAGCTATTCATTGGTTGGGAAGGTGTAGGAATTATGTCCTTTTTATTAATTGG---------------TTGGTGACATGGACGCTCAGACGCTAACACAGCAGCCCTCCAAGCTATTATCTTTAACCGAATTGGGGATGTAGGTCTAATTTTAGCTA-TAGCATGATT--------------TTTTAAAAACTTTAACTCCTGAGAATTTCAACAA-------------------ATCTTCTTACTAAACCCTCCCAATAATG------TTCCTTTA------CTTGGACTCCTCCTAGCAGCAATAGGCAAATCTGCACAATTTGGTCTACATCCCTGACTCCCCTCCGCAATAGAAGGCCCAACCCCAGTCTCAGCACTTCTTCACTCTAGCACTATAGTAGTAGCAGGAATTTTCTTACTAATTCGGTTTTATCCTCTTTACCAAAATAATAGTACGATACAGACATTAATTCTATGTGTAGGAGCCCTAACAACGCTATTCACAGCAGTCTGTGCCTTAACCCAAAATGATATTAAAAAGATTGTAGCATTCTCTACTTCAAGCCAATTAGGACTAATAATAGTTACCATCGGAATTAATCAACCTTACT
|
|
1584
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1585
|
+
s monDom4.chrUn 117163465 735 + 174229318 CAATAAGCTTCAAACTAGATTTCTTCTCAATTATCTTTATCCCCATTGCCCTGTATGTGAC----CTGATCTATCCTAGAATTTTCCTTAT--GGTATATACATTCTGATATTTTTATCCATAAATTCTTCAAATACTTAGTATCCTTCCTCCTAACAATAATTATTTTGGTCTCAGCTAACAACTTATTTCAGCTGTTCATTGGATGGGAGGGTGTTGGTATTATGTCCTTTCTACTAATTGG---------------CTGATGGTACGGACGCACAGATGCTAACACCGCAGCCTTACAAGCAATTATCTACAACCGAATTGGAGACATTGGCTTTATACTGACAA-TAGCATGACT--------------AATACTAAACAGCAACTCCTGAGAACTACAAAAC-------------------ATCTTCTC------CACTAACATAGACTT---TATCGCACTT------CTAGGCCTAATTATTGCTGCAACCGGAAAATCCGCCCAATTCGGCCTACATCCATGACTCCCTTCTGCAATAGAAGGCCCAACCCCTGTATCAGCCCTACTTCACTCAAGCACTATAGTAGTAGCAGGAATTTTCTTACTAATCCGCTTCCACCCCATGATAGAAAATAATCAAATAATTTTAACGACCATTCTATGTTTAGGGGCAATAACAACACTATTTACAGCAATCTGTGCAATTACACAAAATGATATTAAAAAAATTGTAGCATTCTCCACTTCAAGCCAATTAGGCCTAATAATAGTTACTGTAGGCCTAAATCAACCCCACT
|
|
1586
|
+
i monDom4.chrUn C 0 C 0
|
|
1587
|
+
s galGal2.chrM 13302 738 + 16775 CCATCTCCCTAAAAATAGACATATACTCCATAATATTCTTCCCCATTGCACTATTTGTAAC----CTGATCCATCTTAGAGTTCGCAACAT--GATACATAGCATCCGAACCATTTATTACAAAATTCTTTACCTACCTACTCACCTTCCTCATCGCCATATTAACACTAACCATCGCAAATAACATATTCCTCCTATTTGTAGGATGAGAAGGAGTAGGAATCATGTCATTCCTTCTCATTGG---------------ATGATGACAAGGACGAGCTGAAGCCAACACAGCTGCACTACAGGCAATAATCTACAACCGAATCGGAGACATTGGCCTCATCCTAAGCA-TAGCATGACT--------------AGCCTCTTCCCTAAACACCTGAGAAATTCAACAA-------------------ATCACCCACCCAAAC-CAAACACCCACCC-----TCCCCCTC------CTTGGCCTAATCCTAGCCGCCACAGGAAAATCCGCTCAATTTGGCCTTCACCCATGACTTCCAGCAGCAATAGAAGGCCCAACCCCTGTCTCCGCCCTACTCCATTCCAGCACAATAGTAGTTGCTGGAATTTTTTTACTCATCCGCACCCACCCCTTCCTGTCATCCAATAAAACAGCCCTGACAACGTGCCTATGCTTAGGTGCTCTATCAACACTCTTTGCCGCAACATGCGCTCTCACTCAAAACGACATCAAAAAAATCATTGCCTTCTCCACTTCAAGCCAACTAGGCCTCATAATAGTCACAATTGGCCTAGACCTCCCCCAAC
|
|
1588
|
+
i galGal2.chrM C 0 C 0
|
|
1589
|
+
s xenTro2.scaffold_8452 13792 760 + 23823 AAGTAGGCTTCCTGGTAGACAGTCTGACGGCCATGATGATGGTCGTGGTGACTTTCGTATCGCTGATGGTGCAC------ATCTACACCATCGGTTACATGGCAGAGGATGAGGGCTACAACCGCTTCTTCTCCTACATCTCGCTGTTCACCTTCTCCATGCTCATGCTGGTCATGAGCAACAACCTGCTGCAGCTGTTCTTCGGCTGGGAGGCGGTGGGGCTGGTGTCGTACCTGCTCATCGG---------------CTTCTGGTTCAACAAGCCCACGGCCATCTTCGCCAACATGAAAGCCTTTCTGGTCAACCGCGTGGGCGACTTCGGCTTCATCCTGGGCATTGGCCTGATCGCGGCCTACGCGGGCACGCTGAACTACGGC----GAGATTTTCGCCAAGTCAGCCGAACTGGGCAGCATCGGCTTCCCCGGCACCGACTGGATGCT---GATCACCGTGGTCTGCATCTGCCTGTTCATCGGCGCCATGGGCAAGAGCGCACAGTTCCCGCTGCACGTGTGGTTGCCCGATTCGATGGAAGGCCCAACGCCCATCTCCGCGCTGATCCACGCCGCCACCATGGTGACGGCAGGCATCTTCATGGTGTCGCGCATGTCGCCGCTGTTCGAACTGTCGGACGCGGCGCTGAACTTCATCCTCGTGATCGGCGCCATCACAGCGCTGTTCATGGGCTTCCTGGGCATCATCCAGAACGACATCAAGCGCGTGGTGGCCTATTCCACACTGTCGCAGCTGGGCTATATGACCGTGGCCCTGGG-----------------
|
|
1590
|
+
i xenTro2.scaffold_8452 I 1675 I 17
|
|
1591
|
+
s tetNig1.chrUn_random 108043461 744 - 171761319 ACATTAGTCTTAAATTCGACCACTACTCTATCATCTTCACCCCCGTCGCCCTCTATGTGAC----CTGATCTATTTTAGAGTTCGCGTCCT--GATACATGCACGCCGACCCATTCATAAACCGATTTTTTAAGTACCTTCTAACCTTTCTCATCGCAATAATTATCCTAGTCACAGCCAACAATATGTTTCAACTGTTTATTGGGTGAGAAGGCGTAGGAATCATATCCTTCCTATTAATCGG---------------CTGATGGTACGCACGGGCTGACGCCAACACCGCAGCACTACAGGCAGTCCTATACAACCGAGTCGGAGACATCGGCCTAGTCTTCTCCA-TAGCCTGAAT--------------AGCCACTCATCTTAACTCCTGAGAAATCCAACAA-------------------ATCTTTTTTTCCTCAAAAGATATAGACCTGACCCTCCCCCTA------ATCGCCCTAATCCTAGCTGCAACAGGAAAATCAGCACAATTCGGACTTCACCCTTGACTGCCCTCTGCCATAGAGGGCCCCACACCGGTCTCTGCCCTACTACACTCCAGCACCATAGTTGTCGCAGGAATTTTCCTGCTAATTCGGACTAGCCCCCTAATAGAAAACAACCCCACAGCCCTAACACTATGTCTATGTCTAGGAGCCCTCACCACCTTGTTTACTGCCACATGCGCACTCACCCAAAACGACATCAAAAAAATCGTTGCTTTCTCAACCTCAAGCCAACTAGGCCTCATAATAGTGACCATCGGACTTAATCAACCCCAAC
|
|
1592
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1593
|
+
s danRer4.chrM 13125 744 + 16596 ACCTAAGTTTTAAATTTGACTACTATTCTGTGACTTTTACCTCAATCGCCTTATTCATCAC----CTGGTCAATTTTAGAATTTGCATCAT--GATATATAGCCTCTTATCCACAAAAAGAATTATTTTACAAATATTTACTTCTTTTTCTTATATCAATAATTATCTTAGTTACAGCCAACAATCTATTTCAACTATTTATTGGCTGAGAAGGGGTAGGAATCATATCATTTTTACTCATTGG---------------CTGATGATTTGGGCGGACAGAGGCTAACACAGCATCTCTACAGGCCGTAATCTACAACCGAATAGGAGACATTGGATTTATCTTAACCT-TAGCATGAAT--------------AGCAATATACCTCAACTCCTGAGACATTCAGCAA-------------------ATTTTCATTCTTTCAAAAGACTTCGACATGACCATTCCCCAA------ATTGGACTTATTATTGCAGCCACAGGGAAATCAGCCCAATTTACACTTCACCCCTGACTACCATCAGCCATAGAAGGCCCTACACCAGTATCTGCTTTACTTCACTCTAGCACTATGGTTGTAGCAGGGATTTTCCTTTTAATCCGTCTTCACCCAATTATAGAAACTAACAAGCTTGCACCAACAATCTGTCTATGCCTTGGAGCATTAACAACTCTATTTGCAGCAACCTGTGCTCTAACCCAAAATGATATCAAAAAAATCGTAGCTTTCTCAACATCAAGCCAACTAGGGCTAATGATAGTAGCAATTGGCCTAAACCAACCACATC
|
|
1594
|
+
i danRer4.chrM C 0 C 0
|
|
1595
|
+
|
|
1596
|
+
a score=759977.000000
|
|
1597
|
+
s mm8.chrM 12711 121 + 16299 TAGCATTCCTACACATCTGTACC-CACGC-ATTCTTCAAAGCTATACTCTTTATATGCTCTGGCTCAATCATTCATAGCCTGGCAGACGAAC-AAGACATCCG-AAAAATAGGAAACATCACAAA
|
|
1598
|
+
s rn4.chrM 12690 121 + 16300 TTGCTTTCCTCCACATTTGCACC-CATGC-ATTCTTCAAAGCCATATTATTCATATGCTCCGGATCAATCATCCATATCCTCAACGATGAAC-AAGACATTCG-AAAAATAGGCAATATAATAAA
|
|
1599
|
+
i rn4.chrM C 0 C 0
|
|
1600
|
+
s oryCun1.scaffold_140182 12877 121 + 20791 TGGCATTTCTCCACATCTGCACC-CACGC-CTTCTTCAAAGCTATGCTCTTTCTCTGCTCCGGCTCAATTATTCACAGCCTCAATGATGAAC-AGGATATCCG-AAAGATAGGCGGCCTATATAA
|
|
1601
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1602
|
+
s hg18.chrM 13307 121 + 16571 TAGCATTCCTGCACATCTGTACC-CACGC-CTTCTTCAAAGCCATACTATTTATGTGCTCCGGGTCCATCATCCACAACCTTAACAATGAAC-AAGATATTCG-AAAAATAGGAGGACTACTCAA
|
|
1603
|
+
i hg18.chrM C 0 C 0
|
|
1604
|
+
s panTro2.chrM 12724 121 + 16554 TAGCATTCCTTCACATCTGCACC-CACGC-TTTCTTCAAAGCCATACTATTCATATGCTCCGGATCCATTATTCACAACCTCAATAATGAGC-AAGACATTCG-AAAAATAGGAGGATTACTCAA
|
|
1605
|
+
i panTro2.chrM C 0 C 0
|
|
1606
|
+
s rheMac2.chr5 34448421 121 - 182086969 TAGCATTCCTTCACATCTGCACC-CATGC-CTTTGTTAAAGGTATATTATTTATATGTTTAGGATTCATCATCCATAGCCTCAATGATGAGC-AAGACATCTG-AAAAATAGGAGGGCTATTCAA
|
|
1607
|
+
i rheMac2.chr5 C 0 C 0
|
|
1608
|
+
s bosTau2.chrM 13078 121 + 16338 TAGCTTTCCTCCACATCTGTACC-CACGC-CTTTTTCAAAGCTATACTATTCATATGCTCCGGTTCCATTATTCACAGCCTAAACGACGAAC-AAGATATTCG-AAAAATAGGAGGCCTATTTAA
|
|
1609
|
+
i bosTau2.chrM C 0 C 0
|
|
1610
|
+
s canFam2.chrM 12747 121 + 16727 TAGCCTTCTTACACATCTGCACT-CACGC-ATTTTTTAAAGCTATACTATTCATATGCTCAGGGTCAGTTATCCACAGCCTAAACGATGAAC-AAGACATTCG-AAAAATGGGTGGCCTATTTAA
|
|
1611
|
+
i canFam2.chrM C 0 C 0
|
|
1612
|
+
s dasNov1.scaffold_23239 16537 121 - 16977 TAGCCTTTCTGCACATTTGCACC-CACGC-ATTTTTCAAAGCCATATTATTCATATGCTCTGGATCAATTATCCACAGCCTAAACAATGAAC-AGGACATTCG-AAAAATAGGTGGCTTACTAAA
|
|
1613
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1614
|
+
s loxAfr1.scaffold_36650 15712 121 + 16266 TAGCCTTTATCCACATATGTACA-CACGC-ATTCTTCAAGGCAATACTATTTCTCTCCTCTGGCTCTATCATCCACAACCTAAACAACGAAC-AAGACATCCG-CAAAATAGGAGGACTCTATAA
|
|
1615
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1616
|
+
s echTel1.scaffold_181343 12113 125 + 18297 TAGCATTTATACATATCTGTACGCCATGCAATTCTTTAAAGCCATACTCTTTTTATGCTCAGGCTCTATTATTCATAACCTCAATAATGAGCGAAGACATCCGAAAAAATGGGAGGTCTATTTAA
|
|
1617
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1618
|
+
s monDom4.chrUn 117164200 121 + 174229318 TAGCATTTTTACACATCTGTACA-CACGC-ATTCTTTAAAGCTATACTATTCCTATGCTCAGGGTCCATTATTCATAGCTTAAATGACGAAC-AGGATATTCG-AAAAATAGGCGGACTATTTCT
|
|
1619
|
+
i monDom4.chrUn C 0 C 0
|
|
1620
|
+
s galGal2.chrM 14040 121 + 16775 TAGCCTTCCTCCACATCTCAACC-CATGC-CTTCTTTAAAGCTATATTATTCCTATGCTCCGGCCTAATTATCCACAGCCTCAATGGAGAAC-AAGACATCCG-CAAAATAGGATGTCTACAAAA
|
|
1621
|
+
i galGal2.chrM C 0 C 0
|
|
1622
|
+
s xenTro2.scaffold_8452 14569 121 + 23823 TGGCCGTGTTCCACCTGATGACG-CACGC-CTTCTTCAAGGCGCTGCTGTTCCTCGGCGCGGGCTCGGTCATCATGGGCATGCACCACAATC-AGGACATCCG-CTGGATGGGCGGTGTGCGCAA
|
|
1623
|
+
i xenTro2.scaffold_8452 I 17 N 0
|
|
1624
|
+
s tetNig1.chrUn_random 108044205 121 - 171761319 TTGCCTTCCTACACATCTGCACC-CATGC-ATTCTTCAAAGCAATACTATTCCTTTGCTCCGGCTCAATTATCCACAGCCTGAACGACGAAC-AAGACATCCG-AAAAATAGGAGGAATACACCA
|
|
1625
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1626
|
+
s danRer4.chrM 13869 121 + 16596 TAGCATTTTTCCACATCTGCACT-CACGC-TTTTTTTAAAGCCATATTATTCTTATGCTCAGGGGCAATTATTCACAGTCTTAACAACGAAC-AAGACATCCG-TAAAATAGGGGGAACTTACCA
|
|
1627
|
+
i danRer4.chrM C 0 C 0
|
|
1628
|
+
|
|
1629
|
+
a score=213535.000000
|
|
1630
|
+
s mm8.chrM 12832 57 + 16299 AATCATACCATTCACATCATCATGCCTAGTAATCGGAAGCCTCGCCCTCACAGGAAT
|
|
1631
|
+
s rn4.chrM 12811 57 + 16300 AGCAATACCATTCACATCATCTTGTCTCATTATCGGAAGCCTAGCCCTTACCGGAAT
|
|
1632
|
+
i rn4.chrM C 0 C 0
|
|
1633
|
+
s oryCun1.scaffold_140182 12998 57 + 20791 GACTATACCCTTCACAGCCTCAGCCCTCACTATTGGCAGTCTGGCCCTCACAGGTAT
|
|
1634
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1635
|
+
s hg18.chrM 13428 57 + 16571 AACCATACCTCTCACTTCAACCTCCCTCACCATTGGCAGCCTAGCATTAGCAGGAAT
|
|
1636
|
+
i hg18.chrM C 0 C 0
|
|
1637
|
+
s panTro2.chrM 12845 57 + 16554 AACCATACCCCTCACTTCAACCTCCCTCACCATTGGGAGCCTAGCATTAGCAGGAAT
|
|
1638
|
+
i panTro2.chrM C 0 C 0
|
|
1639
|
+
s rheMac2.chr5 34448542 57 - 182086969 GACTTTACCCCTTACTTCTTCTTCCTTTATTATTGGCAGCTTTGCACTTACAGGCAC
|
|
1640
|
+
i rheMac2.chr5 C 0 C 0
|
|
1641
|
+
s bosTau2.chrM 13199 57 + 16338 AGCCATGCCATTCACCACAACAGCCCTCATTGTTGGCAGTCTCGCACTAACAGGAAT
|
|
1642
|
+
i bosTau2.chrM C 0 C 0
|
|
1643
|
+
s canFam2.chrM 12868 57 + 16727 AGTCCTTCCCTTCACCACAACCTCCCTTATTATCGGAAGCCTCGCATTAACAGGCAT
|
|
1644
|
+
i canFam2.chrM C 0 C 0
|
|
1645
|
+
s dasNov1.scaffold_23239 16658 57 - 16977 AGCAATACCATTTACATCATCATGCCTAATAATTGGAAGCCTTGCATTAACAGGAAT
|
|
1646
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1647
|
+
s loxAfr1.scaffold_36650 15833 57 + 16266 AACAATACCTATTACCTCAACAGCTATCATTATTGGCAGCTTAGCACTCACCGGTAT
|
|
1648
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1649
|
+
s echTel1.scaffold_181343 12238 57 + 18297 ACTAATACCATTTACATCTTCTTCACTTACGATTGGTAGCCTAGCATTAACAGGCAC
|
|
1650
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1651
|
+
s monDom4.chrUn 117164321 57 + 174229318 CATTCTACCTATTACATCATCTGCATTAATAACAGGCAGCCTAGCCCTAGTAGGCAC
|
|
1652
|
+
i monDom4.chrUn C 0 C 0
|
|
1653
|
+
s galGal2.chrM 14161 57 + 16775 AACCCTCCCAATAACCACCTCCTGCCTAACCATTGGCAACCTCGCTCTAATAGGAAC
|
|
1654
|
+
i galGal2.chrM C 0 C 0
|
|
1655
|
+
s xenTro2.scaffold_19023 322 57 + 3053 ACTCACACAAATCACCTTCTGAGCCTTAGTAGCTGACACCCTAATCCTCACATGAAT
|
|
1656
|
+
i xenTro2.scaffold_19023 N 0 I 912
|
|
1657
|
+
s tetNig1.chrUn_random 108044326 57 - 171761319 CTTAACCCCCTTTACCTCTTCCTGCTTAACAATCGGCAGCCTTGCCCTAACAGGCAC
|
|
1658
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1659
|
+
s danRer4.chrM 13990 57 + 16596 CACCCTACCAATAACCACAAACTATTTGACCATCGGGAAAATAGCCCTTATGGGTAC
|
|
1660
|
+
i danRer4.chrM C 0 C 0
|
|
1661
|
+
|
|
1662
|
+
a score=661041.000000
|
|
1663
|
+
s mm8.chrM 12889 134 + 16299 ACCATTCCTAACAGGGTTCTACTCAAAAGACCTAATTATTGAAGCAATTAATACC-TGCAACACCAACGCCTGAGCCCTACTAATTACACTAATCGCCACTTCTATAACAGCTATGTACAGCATACGAATCATTT
|
|
1664
|
+
s rn4.chrM 12868 134 + 16300 ACCTTTCCTCACAGGATTCTATTCAAAAGATCTCATCATCGAAGCCATCAACACG-TGTAACACCAACGCCTGAGCCCTAATAATCACTTTAATCGCCACATCCATAACTGCTGTGTACAGCATACGGATCATCT
|
|
1665
|
+
i rn4.chrM C 0 C 0
|
|
1666
|
+
s oryCun1.scaffold_140182 13055 134 + 20791 ACCATTCCTAACAGGCTTTTACTCAAAAGATCTAATTATTGAATCAGCAAACACG-TCTAATACCAACGCCTGAGCCCTTATCATCACTCTTATTGCCACATCCCTAACAGCTGTCTATAGCACTCGAATTATCT
|
|
1667
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1668
|
+
s hg18.chrM 13485 134 + 16571 ACCTTTCCTCACAGGTTTCTACTCCAAAGACCACATCATCGAAACCGCAAACATA-TCATACACAAACGCCTGAGCCCTATCTATTACTCTCATCGCTACCTCCCTGACAAGCGCCTATAGCACTCGAATAATTC
|
|
1669
|
+
i hg18.chrM C 0 C 0
|
|
1670
|
+
s panTro2.chrM 12902 134 + 16554 ACCCTTCCTCACAGGTTTCTACTCCAAAGACCTCATCATCGAAACCGCTAACATA-TCATACACAAACGCCTGAGCCCTATCTATTACTCTCATCGCCACCTCTCTGACAAGCGCCTACAGCACCCGAATAATCC
|
|
1671
|
+
i panTro2.chrM C 0 C 0
|
|
1672
|
+
s rheMac2.chr5 34448599 134 - 182086969 GCCTTTCCTCACAGGCTTTTACTCT-AAGGCCTCATCATTGAAACCTCAAACACATTCATACACCAATGCCTGAGCCCTTTATATTACTCTTATTGCCAGTTTCTTGACAGCTGTTCATAATACCCATATTATTT
|
|
1673
|
+
i rheMac2.chr5 C 0 C 0
|
|
1674
|
+
s bosTau2.chrM 13256 134 + 16338 ACCCTTCCTCACAGGATTCTACTCCAAAGACCTAATCATCGAAGCCGCCAACAAG-TCTTATACCAACGCCTGAGCCCTTCTAATAACATTAATTGCCACCTCTTTCACAGCTATTTACAGCACCCGTATTATTT
|
|
1675
|
+
i bosTau2.chrM C 0 C 0
|
|
1676
|
+
s canFam2.chrM 12925 134 + 16727 GCCTTTCCTTACAGGATTCTACTCCAAAGACCTGATCATCGAGTCCGCTAACACG-TCGAATACCAACGCCTGAGCCCTCTTAATTACACTCGTTGCCACATCCCTAACCGCTGCCTACAGCACCCGAATTATAT
|
|
1677
|
+
i canFam2.chrM C 0 C 0
|
|
1678
|
+
s dasNov1.scaffold_23239 16715 134 - 16977 ACCATTTCTAACAGGCTTCTACTCAAAAGACCTAATCATTGAATCAGCCAACACA-TCCTACTCAAACGCCTGAGCCCTCTTAATTACACTACTTGCCACCTCATTCACAGCATCATATAGTACACGACTAATCT
|
|
1679
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1680
|
+
s loxAfr1.scaffold_36650 15890 134 + 16266 ACCATTCCTAACAGGGTTTTACTCAAAAGACCCAATTATTGAAACTGCTAACATA-TCCTACATCAACACCTGAGCACTACTAATTACTCTCATTGCCGTATCCATAACAGCAAGTTACAGTACCCGAATCATTT
|
|
1681
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
1682
|
+
s echTel1.scaffold_181343 12295 134 + 18297 ACCTTTCCTCACAGGATTTTACTCAAAAGACCTAATTATTGAAGCTATAAATTTA-TCTCACATCAACGCCTGAGCCCTAATCTTAACTCTAATTGCAACCTCTATAACAGCTATCTACAGCACCCGAATTATCT
|
|
1683
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1684
|
+
s monDom4.chrUn 117164378 134 + 174229318 CCCCTTCCTAGCTGGTTTTTACTCAAAAGACTCAATCATTGAAGCCATTAACACA-TCATATACAAATTCATGGGCCTTAATAATAACTCTTATTGCCACTTCTCTTACAGCCATCTATAGCCTACGAATTATTT
|
|
1685
|
+
i monDom4.chrUn C 0 C 0
|
|
1686
|
+
s galGal2.chrM 14218 134 + 16775 TCCATTCCTAGCAGGCTTCTACTCAAAAGACCTGATCATCGAAAACCTAAACACC-TCATACATCAATACCTGAGCCCTCTCACTTACACTACTTGCCACATCTTTCACTGCAACCTACAGCCTCCGCATAACCT
|
|
1687
|
+
i galGal2.chrM C 0 C 0
|
|
1688
|
+
s tetNig1.chrUn_random 108044383 134 - 171761319 CCCTTTCCTCGCCGGCTTTTTCTCAAAAGACGCCATCATTGAAGCCCTCAACACC-TCCTACCTAAACGCCTGAGCCCTTTCTCTCACCCTTCTGGCAACCTCCTTCACAGCCATCTACAGCTTGCGCGTTGTCT
|
|
1689
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1690
|
+
s danRer4.chrM 14047 134 + 16596 CCCCTTCCTTGCAGGATTTTTCTCAAAAGACGCTATCCTAGAAGCAATAACCACC-TCCCATCTTAACGCCTGAGCCCTAACACTAACATTAATCGCCACATCATTTACCGCAGTTTATAGCTTCCGAATAATTT
|
|
1691
|
+
i danRer4.chrM C 0 C 0
|
|
1692
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1693
|
+
|
|
1694
|
+
a score=405230.000000
|
|
1695
|
+
s mm8.chrM 13023 124 + 16299 ACTTCGTAACAATAACAAAACCGCGTTTTCCCCCCCTAATCTCCATTAACGAAAATGACCC-AGACCTCATAAACCCAATCAAACGCCTAGCATTCGGAAGCATCTTTGCAGGATTTGTCATCTC---
|
|
1696
|
+
s rn4.chrM 13002 124 + 16300 ACTTCGTCACCATGACAAAACCACGATACTCCCCACTAATTACTATTAATGAAAACAACCC-AAACCTCATTAATCCAATCAAACGCCTAGCATTAGGAAGCATCCTAGCAGGCTTCCTTATCTC---
|
|
1697
|
+
i rn4.chrM C 0 C 0
|
|
1698
|
+
s oryCun1.scaffold_140182 13189 124 + 20791 TCTTCGCCCTCCTGGGTCAACCCCGTTACCCAGCCCTTATTATTATTAACGAAAATAACCC-TCTACTCATCAACTCTATTAAACGCCTTGCACTAGGAAGCATTTTTGCAGGATTCTTAATTTC---
|
|
1699
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1700
|
+
s hg18.chrM 13619 124 + 16571 TTCTCACCCTAACAGGTCAACCTCGCTTCCCCACCCTTACTAACATTAACGAAAATAACCC-CACCCTACTAAACCCCATTAAACGCCTGGCAGCCGGAAGCCTATTCGCAGGATTTCTCATTAC---
|
|
1701
|
+
i hg18.chrM C 0 C 0
|
|
1702
|
+
s panTro2.chrM 13036 124 + 16554 TCCTCACCCTAACAGGTCAACCTCGCTTCCCAACCCTCACCAACATTAACGAAAACAACCC-CACTCTGTTAAATCCCATTAAACGCCTAACCATTGGAAGCTTATTTGCAGGATTTCTCATTAC---
|
|
1703
|
+
i panTro2.chrM C 0 C 0
|
|
1704
|
+
s rheMac2.chr5 34448733 124 - 182086969 TCTTCACTCTTATAGGACAACCTTGCTTCACAACTGTGGCTGCTATTAATGAAAATAACCC-CTTCCTAATTGACTCAATTAAGCACCTAACAATCGGCAGCATATTCACCGGATTCCTCATCAC---
|
|
1705
|
+
i rheMac2.chr5 C 0 C 0
|
|
1706
|
+
s bosTau2.chrM 13390 124 + 16338 TTTTCGCACTTCTAGGACAACCCCGATTCCCTACCCTAGTTAATATTAACGAAAACAACCC-CCTTCTGATCAACTCTATCAAACGCTTACTAATTGGAAGCCTCTTCGCAGGATACATCATTTC---
|
|
1707
|
+
i bosTau2.chrM C 0 C 0
|
|
1708
|
+
s canFam2.chrM 13059 124 + 16727 TCTTTGCTCTACTAGGCCAGCCCCGCTTCTCCCCTATAATCCTTATCAACGAGAATAATCC-TCTCCTAATTAACTCTATTAAACGACTCCTTATCGGAAGTGTATTTGCAGGGTATATTATCTC---
|
|
1709
|
+
i canFam2.chrM C 0 C 0
|
|
1710
|
+
s dasNov1.scaffold_23239 16849 124 - 16977 ACTTTTCCTCACTAGGACCACCACGATATCTACCCCTCATCACCATTAATGAAAACAACCC-TAATCTCCTAAAACCGATCAAACGCCTAGCCCTAGGAAGCATTTTCGCGGGCTTCTTGATCTC---
|
|
1711
|
+
i dasNov1.scaffold_23239 C 0 N 0
|
|
1712
|
+
s loxAfr1.scaffold_36650 16024 124 + 16266 TCTTTGCTCTCCTTGGGCAACCACGATACCCCCCACTAACCCAAGTCAACGAAAATAACCC-GTATCTCGTCAACCCTATTAAACGATTAATCCTAGGCAGTATCTTCATGGGCTTCCTTATCTC---
|
|
1713
|
+
i loxAfr1.scaffold_36650 C 0 I 3
|
|
1714
|
+
s echTel1.scaffold_181343 12429 124 + 18297 ATTTCGCCCTAATAAACCAACCCCGATTTAACTCAATCATTACCATCAATGAGAATACTAT-AGACCTTATTAATCCTATTAAACGTTTAGTTATCGGAAGCATCCTAGCTGGATTCTTGATTTC---
|
|
1715
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1716
|
+
s monDom4.chrUn 117164512 124 + 174229318 ACTATGCCCTGCTAGGTAACCCACGTTTCTCTTCTATTTCACCAATTAATGAAAATAACCC-AAATTTAATTAACCCTATTATACGATTAGCTATAGGAAGCATTTTCGCAGGATTCTTAGTAAC---
|
|
1717
|
+
i monDom4.chrUn C 0 C 0
|
|
1718
|
+
s galGal2.chrM 14352 124 + 16775 TACTAGTCCAAACAGGACACACACGAACCCCCAGCAATCACCCCATTAACGAAAACACCCC-CCCAGCCATTCTCCCAATCATACGACTAGCCCTTGGCAGCATTATAGCAGGCCTATTAATCTC---
|
|
1719
|
+
i galGal2.chrM C 0 C 0
|
|
1720
|
+
s tetNig1.chrUn_random 108044517 127 - 171761319 TCTTCGTCTCTATAGGCCACCCTCGCTTTAACACCCTCTCCCCCATCAACGAAAACAACCC-CGCCGTAATTAACCCGATCAAACGACTAGCCTGAGGAAGCATCCTCGCTGGCTTACTAATCACCGC
|
|
1721
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1722
|
+
s fr1.chrUn 320903858 128 + 349519338 ACTTCGTATCCATAGGCCACCCTCGCTTTAATTCCCTTTCACCAATCAATGAAAATAACCCATGCTGTAATTAAACCTATCAAACGACTGGCATGAGGCAGCATTATTGCTGGCCTATTAATCACCAC
|
|
1723
|
+
i fr1.chrUn N 0 C 0
|
|
1724
|
+
s danRer4.chrM 14181 121 + 16596 ACTTAGTCTGTTTAGGAAGCCCCCGACACAAGACCTACGAGACAATTGATGAAAA----CCACATTCCAACCAATACTATTCAACGGCTTGCCTGAGGAAGCATTATTGCAGG---ATTAATCATCTC
|
|
1725
|
+
i danRer4.chrM C 0 C 0
|
|
1726
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1727
|
+
|
|
1728
|
+
a score=247774.000000
|
|
1729
|
+
s mm8.chrM 13147 116 + 16299 ATATAATATTCCA---CCAACCAGCATTCCAGTCCTCACAATACCA-TGATTTTTAAAAACCACAGCCCTAATTATTTCAGTATTAGGATTCCTAATCGCACTAGAACTAAACAACCTAA
|
|
1730
|
+
s rn4.chrM 13126 116 + 16300 ACTAAATATTCCT---CCAACTAACATTCAAATTCTCACAATACCC-TGACATTTAAAAATAACAGCCCTACTTATTACAATCCTAGGATTTGCCATTGCCCTAGAACTTAACAATTTAA
|
|
1731
|
+
i rn4.chrM C 0 C 0
|
|
1732
|
+
s oryCun1.scaffold_140182 13313 116 + 20791 CAACCTTATTACA---CCAAACAATGTCCCTCAAATAACTATACCC-CTATATATAAAAATAACTGCTCTATTTGTTACCATTATAGGCTTTACTATTGCAATAGAACTTAACCAACTCA
|
|
1733
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1734
|
+
s hg18.chrM 13743 116 + 16571 TAACAACATTTCC---CCCGCATCCCCCTTCCAAACAACAATCCCC-CTCTACCTAAAACTCACAGCCCTCGCTGTCACTTTCCTAGGACTTCTAACAGCCCTAGACCTCAACTACCTAA
|
|
1735
|
+
i hg18.chrM C 0 C 0
|
|
1736
|
+
s panTro2.chrM 13160 116 + 16554 CAACAACATTCTC---CCCATATCTACTCCCCAAGTGACAATTCCC-CTTTACTTAAAACTTACAGCCCTAGGCGTTACTTCCCTAGGACTTCTAACAGCCCTAGACCTCAATTACCTAA
|
|
1737
|
+
i panTro2.chrM C 0 C 0
|
|
1738
|
+
s rheMac2.chr5 34448857 116 - 182086969 CAACAGTATTATG---CTTGCTTCATCCCCCCAAACAACCATACCA-CTCCACCTGAAGCTCACAGCTCTAGGTGTGACGCTTTTAGGCTTCTCACTAGCAACGGAGCTTAATCCCATAA
|
|
1739
|
+
i rheMac2.chr5 C 0 C 0
|
|
1740
|
+
s bosTau2.chrM 13514 116 + 16338 CAACAATATTCCT---CCAACAACAATTCCCCAAATAACTATGCCC-TACTACCTAAAAACAACAGCCCTAATTGTTACAATCCTAGGCTTCATCTTAGCCCTAGAAATCAGTAATATAA
|
|
1741
|
+
i bosTau2.chrM C 0 C 0
|
|
1742
|
+
s canFam2.chrM 13183 116 + 16727 CCACAGCATCACA---CCCACTACCATCCCACAGATAACTATGCCT-CATTATCTAAAAATGACAGCCCTTGCAGTAACCACCTTGGGTTTCATCCTGGCACTAGAACTAAACCTTACCT
|
|
1743
|
+
i canFam2.chrM C 0 C 0
|
|
1744
|
+
s dasNov1.scaffold_1761 31149 116 + 197909 CAACTATATTCCA---CCCCTAATCACACAACAAACAACCATACCT-AACTACATAAAACTATCAGCACTTATTGTAACAATTATAGGATTCATGGTCGCCATAGAACTAAGTCATATCA
|
|
1745
|
+
i dasNov1.scaffold_1761 N 0 C 0
|
|
1746
|
+
s loxAfr1.scaffold_36650 16151 113 + 16266 AAATACTATCCCG---CACACAA---CACCCCAAATAACCATACCT-CCTCACTTAAAATTTATAGCCCTGGCTGTAACCTTACTAGGATTTACGGTAGCAACAGAACTTAACAACATAA
|
|
1747
|
+
i loxAfr1.scaffold_36650 I 3 N 0
|
|
1748
|
+
s echTel1.scaffold_181343 12553 116 + 18297 CTACAGCATCCCC---CCTACAAATTATCCCCTCATAACTATACCT-GCATATTTAAAAATAACCGCCCTAACCGTAACCGTACTAGGCTTCATTACCGCCACAGAGTTGAATATATTAA
|
|
1749
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1750
|
+
s monDom4.chrUn 117164636 116 + 174229318 AATAAGCATCCCA---CCAATAACATCAATCACAATAACTATGCCA-GATATAATTAAATTATCAGCCCTACTAATCACCTTAGCAGGCTTAGCAATTGGTATAGAACTTAACTCTTTCA
|
|
1751
|
+
i monDom4.chrUn C 0 C 0
|
|
1752
|
+
s galGal2.chrM 14476 115 + 16775 ATCCCTAATCCTC---CCCCCTAAAACCCCTCCAATAACTATACCC-ACCATCACAAAAACTGCTGCCATCATTGTTACAACCCTAGGAATTATCCTAGCCCTAGAACTCTCAAGCCTA-
|
|
1753
|
+
i galGal2.chrM C 0 I 27
|
|
1754
|
+
s tetNig1.chrUn_random 108044644 113 - 171761319 ---AAACATCCTA---CCAATAAAAACCCCCGTCATATCCATACCT-CCTCTCCTAAAACTAGCCGCCCTTGCTGTTACACTCCTTGGCCTCCTAACCGCCCTAGAACTAGCCTCCCTAA
|
|
1755
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1756
|
+
s fr1.chrUn 320903986 114 + 349519338 ---ACAACTTCTC---CCAACAAAAACACCCGTAATATCAATACCTATAGTTGTTAACACTTACTGCTCTTATCGTCACAATCTTAGGACTCCTAATTGCCCTAGAATTAGCTTCCTTAA
|
|
1757
|
+
i fr1.chrUn C 0 C 0
|
|
1758
|
+
s danRer4.chrM 14302 116 + 16596 ---ATACACTATAATTCCTCTTAAAACACCCATTTTAACCATGCCT-ATTTATCTAAAATTGGCAGCCATTCTAGTAACTCTACTAGGTATTATCTTAGGACTAGAAATTAGTACGCTAG
|
|
1759
|
+
i danRer4.chrM C 0 C 0
|
|
1760
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1761
|
+
|
|
1762
|
+
a score=7261.000000
|
|
1763
|
+
s mm8.chrM 13263 108 + 16299 ---CCATAAAACTATCAATAAATAAAGCAAATCCATAT--TCATCCTTCTCAACTTTACTGGGGTTTTTCCCATCTATTATTCACCGCATTACACCCAT--AAAATCTCTCAACC
|
|
1764
|
+
s monDom4.chrUn 117164752 105 + 174229318 ---CTAATAAACTTA---TAAA-CTCAATAAAACATACT-ACTAACTTCTCAAATATATTAGGGTACTTCACTTACTTTACTCATCGAATTTACCCCCTAATAAATCTATATT--
|
|
1765
|
+
i monDom4.chrUn C 0 C 0
|
|
1766
|
+
s echTel1.scaffold_181343 12669 108 + 18297 ---CAACGTACTTGAAATTC-T-CTACCCCCAATATATACTATAAATTTTCAAATCTACTAGGTTATTACCCTTCCATTATTCATCGTCTAATACCACAAACTAACTTAATTT--
|
|
1767
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1768
|
+
s loxAfr1.scaffold_17571 30729 108 + 47616 ---CATGCAACTTAACATTCAA-ACAACCATCATATATA-TACAAATTCTCAAATATATTAGGATACTACCCACCTATTGTCCACCGACTTCTACCCTACCTAGGCCTTACTA--
|
|
1769
|
+
i loxAfr1.scaffold_17571 N 0 C 0
|
|
1770
|
+
s dasNov1.scaffold_1761 31265 108 + 197909 ---CACTAAATCTCAAACCAGA-ATACCCAAACCCCTTC-CACTCATTTTCTTCTTTACTAGGGTTTTACCCAAACATTATACATCGAATAACCCCATATTATGCTCTAATAA--
|
|
1771
|
+
i dasNov1.scaffold_1761 C 0 N 0
|
|
1772
|
+
s canFam2.chrM 13299 110 + 16727 ---CACAAGGACTCAAATTTAA-CTATCCTTCTAATTAC-TTTAAATTCTCCAGCCTCCTTGGCTACTATCCAACCATTATGCACCGCCTCACACCTAAAACAAGTTTAACCATT
|
|
1773
|
+
i canFam2.chrM C 0 C 0
|
|
1774
|
+
s bosTau2.chrM 13630 110 + 16338 ---CTAAAAATCTAAAATATCA-CTACCCCTCAAACGCC-TTCAAGTTCTCAACCTTGCTAGGGTATTTCCCCACAATTATACATCGCCTAGCTCCATACATAAATTTATCAATA
|
|
1775
|
+
i bosTau2.chrM C 0 C 0
|
|
1776
|
+
s rheMac2.chr5 34448973 110 - 182086969 ---CTAATAGCCTTAAACCAAA-ATACCCATTACAGACA-TTCAACTTCTCCAACATACTAGGATTTTATTCAGCCACAATTCACCATACAACCCCCAACTTAGGCCTATTCCCA
|
|
1777
|
+
i rheMac2.chr5 C 0 C 0
|
|
1778
|
+
s panTro2.chrM 13276 110 + 16554 ---CCAGCAAGCTCAAAATAAA-ATCCCCACTATATACA-TTTCACTTCTCTAATATACTCGGATTCTACCCTAACATTATACACCGCTCGATCCCCTATCTAGGCCTTCTTACA
|
|
1779
|
+
i panTro2.chrM C 0 C 0
|
|
1780
|
+
s hg18.chrM 13859 110 + 16571 ---CCAACAAACTTAAAATAAA-ATCCCCACTATGCACA-TTTTATTTCTCCAACATACTCGGATTCTACCCTAGCATCACACACCGCACAATCCCCTATCTAGGCCTTCTTACG
|
|
1781
|
+
i hg18.chrM C 0 C 0
|
|
1782
|
+
s oryCun1.scaffold_140182 13429 110 + 20791 ---GCCTTAGTCTAAAAATAACTACACAATCTCCATAC--TTTAACTTCTCAAACATACTAGGGTTCTTTCCAATGACAATTCATCGTATTCTACCCTATCTAAACCTTTCAGCT
|
|
1783
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1784
|
+
s rn4.chrM 13242 108 + 16300 ---CACTAAATCTATCAATAAGCAAACCCACCAAACTA--TCATCATTCTCAACCTCCCTAGGCTACTACCCACCAATTATACCCCGAATTATTCCTCA--AAAAACTCTAAATT
|
|
1785
|
+
i rn4.chrM C 0 C 0
|
|
1786
|
+
s galGal2.chrM 14618 82 + 16775 -----------------------------AATCCCCTC--ATAAACTTCTCCTCCTCCCTAGGCTACTTTAACCCCCTAACTCACCGAATTAGCCCCTCAATCCTCCTACATA--
|
|
1787
|
+
i galGal2.chrM I 27 C 0
|
|
1788
|
+
s tetNig1.chrUn_random 108044757 111 - 171761319 CCACCAAACAAATCAAAACAAC-CCCTCACTTAACCCCA-CACCACTTCTCAAACATGCTGGGATTCTTCCCAAGTATCATCCACCGCCTCTCCCCTAAAATAAACCTTATTC--
|
|
1789
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
1790
|
+
s fr1.chrUn 320904100 111 + 349519338 CCTCCAAACAACTTAAACCTAC-ACCACACCTGTCCCCC-CACCACTTCTCAAACATACTTGGCTTCTTCCCAACAATTGTACACCGTGCCTCTCCTAAAATTAATCTCATTT--
|
|
1791
|
+
i fr1.chrUn C 0 C 0
|
|
1792
|
+
s danRer4.chrM 14418 95 + 16596 CTAATAAAATTAACAAAAACAC-TACCCCAGGAATTCCA-TTCCACTTTTCAATTTCACTAATCTTCTTTCCA---ATCCTTCACCGACTAATCCCTATA---------------
|
|
1793
|
+
i danRer4.chrM C 0 I 109
|
|
1794
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1795
|
+
|
|
1796
|
+
a score=103897.000000
|
|
1797
|
+
s mm8.chrM 13371 95 + 16299 TAAGCCTAAAAACATCCCTAACTCTCCTAGACTTGATCTGGTTAGAAAAAACCATCCCAAAATC-------CACCTCAACTCTTCACACAAA----CATAACC---ACT
|
|
1798
|
+
s rn4.chrM 13350 91 + 16300 CTAGCTACAAATTATCCTTAAACCTACTAGACCTAATCTGATCAGAAAAGACAATCCCAAAATC-------AACCTCAA----TCACCCAAA----CCCAACT---ATC
|
|
1799
|
+
i rn4.chrM C 0 C 0
|
|
1800
|
+
s oryCun1.scaffold_140182 13539 93 + 20791 --AGCCAAAACATAGCCACATTACTCCTAGATATGACCTGAACTGAAAAAGCGATCCCGAAAAA-------TATCTCAG----ACATTCAAATTTTCGCATCA---ACC
|
|
1801
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1802
|
+
s hg18.chrM 13969 93 + 16571 --AGCCAAAACCTGCCCCTACTCCTCCTAGACCTAACCTGACTAGAAAAGCTATTACCTAAAAC-------AATTTCAC----AGCACCAAATCTCCACCTCC---ATC
|
|
1803
|
+
i hg18.chrM C 0 C 0
|
|
1804
|
+
s panTro2.chrM 13386 93 + 16554 --AGCCAAAACCTACCCCTACTTCTTCTAGACCTGACCTGACTAGAGAAACTATTACCTAAAAC-------AATTTCAC----AGTACCAAATCTCCGCTTCC---ATT
|
|
1805
|
+
i panTro2.chrM C 0 C 0
|
|
1806
|
+
s rheMac2.chr5 34449083 92 - 182086969 --AGCCAAAACCTGGCTTCACTTCTACTAGACCTAATTTGACTAGAAAAGTCTGTACCGAAGAC-------CATTACAC----CAT-CCAAATTTCAGCCTCC---ATT
|
|
1807
|
+
i rheMac2.chr5 C 0 C 0
|
|
1808
|
+
s bosTau2.chrM 13740 93 + 16338 --AGCCAAAAATCAGCATCCTCCCTTCTAGACCTAATCTGACTAGAAGCCATCCTACCAAAAAC-------CATCTCAC----TCGCCCAAATAAAAGCATCT---ACC
|
|
1809
|
+
i bosTau2.chrM C 0 C 0
|
|
1810
|
+
s canFam2.chrM 13409 93 + 16727 --AGCCAGAAATCAGCATCTATACTTCTGGACTCCATCTGACTAGAAAACATCCTACCCAAATC-------AATCTCAT----ATTTCCAAATAAAATCTTCT---ACC
|
|
1811
|
+
i canFam2.chrM C 0 C 0
|
|
1812
|
+
s dasNov1.scaffold_23239 16 92 - 16977 TAAGCCAAAACCTAGC---ATCCCTTACAGTTATTCTCTGACTAGAAAAGTTAGCCCCAAAAAG-------CCTATCAC----AAATGCAGCTTTCAGCTTCC---ATA
|
|
1813
|
+
i dasNov1.scaffold_23239 N 0 C 0
|
|
1814
|
+
s loxAfr1.scaffold_17571 30837 92 + 47616 TAAGCCAAAATCTAGCAACAACTATTATAGACTTAATTTGACTAGAAAAAATAATCCCTAAAAA----------CCTAA----TAATTATGCAAAAAACAACC---GCC
|
|
1815
|
+
i loxAfr1.scaffold_17571 C 0 C 0
|
|
1816
|
+
s echTel1.scaffold_181343 12777 95 + 18297 TAAGCCATAAATTAGCCTCCACTGCCATGGACCTCATCTGATTAGAAAAACTTCTCCCTAAGAA-------TATCTCAT----TAATTAGTATTACAACAGCC---TCC
|
|
1817
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1818
|
+
s monDom4.chrUn 117164857 98 + 174229318 CAGGCCAACGCATTGCTACCATACTAATTGATATAAACTGATATGAAAAAACAGGACCTAAAGGGCAGACTAATATCCA----TTCTTCAAT----ATCATCA---CTA
|
|
1819
|
+
i monDom4.chrUn C 0 C 0
|
|
1820
|
+
s galGal2.chrM 14700 98 + 16775 CCGGACAAAAAATTGCATCCCACTTAATCGACATAGCATGGTACAAAAAAATAGGCCCCGAAGG-------CCTTGCCA----ACCTTCATCTCACCATAACCAAAATC
|
|
1821
|
+
i galGal2.chrM C 0 C 0
|
|
1822
|
+
s fr1.chrUn 320904211 95 + 349519338 TAGGACAAACAATTGCTACCCAAATTATTGACCTAACCTGACTAGAAAAAGTTGGACCCAAAAC-------AATTTCAT----CTATCAATACTCCCCTCATC---TCT
|
|
1823
|
+
i fr1.chrUn C 0 I 4
|
|
1824
|
+
s tetNig1.chrUn_random 108044868 95 - 171761319 TAGGACAAACCATCGCCAGCCAAACCATCGACCTCACCTGACTAGAAAAAATTGGTCCCAAGGC-------AACCGCCA----ACCTAAACACCCCCCTCGTC---TCC
|
|
1825
|
+
i tetNig1.chrUn_random C 0 I 4
|
|
1826
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1827
|
+
e danRer4.chrM 14513 109 + 16596 I
|
|
1828
|
+
|
|
1829
|
+
a score=77227.000000
|
|
1830
|
+
s mm8.chrM 13466 44 + 16299 T----TAACAACC----------AACCAAAAAGGCTTAATTAAATTGTACTT----------TATATC
|
|
1831
|
+
s rn4.chrM 13441 48 + 16300 TAAAATAATATCC----------AACCAAAAAGGACTAATCAAACTATATTT----------CCTATC
|
|
1832
|
+
i rn4.chrM C 0 C 0
|
|
1833
|
+
s oryCun1.scaffold_140182 13632 44 + 20791 T----CCGTATCC----------TCACAAAAAGGCCTCATTAAACTCTACTT----------CCTATC
|
|
1834
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1835
|
+
s hg18.chrM 14062 44 + 16571 A----TCACCTCA----------ACCCAAAAAGGCATAATTAAACTTTACTT----------CCTCTC
|
|
1836
|
+
i hg18.chrM C 0 C 0
|
|
1837
|
+
s panTro2.chrM 13479 44 + 16554 A----CCACCTCA----------ACCCAAAAAGGCATGATCAAACTTTATTT----------CCTCTC
|
|
1838
|
+
i panTro2.chrM C 0 C 0
|
|
1839
|
+
s rheMac2.chr5 34449175 36 - 182086969 A----CCATATCT----------ACTCAGAACGGC----CTTAACTCTACTT--------------TC
|
|
1840
|
+
i rheMac2.chr5 C 0 C 0
|
|
1841
|
+
s bosTau2.chrM 13833 44 + 16338 C----TGGTCACA----------AACCAAAAAGGCCTGATCAAACTATATTT----------CCTCTC
|
|
1842
|
+
i bosTau2.chrM C 0 C 0
|
|
1843
|
+
s canFam2.chrM 13502 44 + 16727 C----TTATTTCA----------AATCAAAAAGGTCTCATCAAACTCTATTT----------CCTATC
|
|
1844
|
+
i canFam2.chrM C 0 C 0
|
|
1845
|
+
s dasNov1.scaffold_23239 108 44 - 16977 A----TCACATCC----------AATCAAAAAGGACTGATCAAACTATACTT----------CATATC
|
|
1846
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1847
|
+
s loxAfr1.scaffold_17571 30929 57 + 47616 A-GCCTAGTATCTAAAAAAAAAAAATCAAAAGGGCCTAATAAAACTCTACTT----------CCTATC
|
|
1848
|
+
i loxAfr1.scaffold_17571 C 0 C 0
|
|
1849
|
+
s echTel1.scaffold_181343 12872 44 + 18297 A----TTATCTCT----------AACCAAAAAGGAATAATCAAATTTTATTC----------CCTAAC
|
|
1850
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1851
|
+
s monDom4.chrUn 117164955 44 + 174229318 C----TTACTTCT----------ACTCAAAAAGGCCTAATTAAAGTTTACTT----------TATATC
|
|
1852
|
+
i monDom4.chrUn C 0 C 0
|
|
1853
|
+
s galGal2.chrM 14798 38 + 16775 T----CAACCACA----------CTCCACACAGGCCTAATTAAATCTTACCT----------------
|
|
1854
|
+
i galGal2.chrM C 0 I 53
|
|
1855
|
+
s tetNig1.chrUn_random 108044967 39 - 171761319 -----TCAGCAAT----------GTCCAACAAGGCTCAATCAAAACAT--------------TATAGC
|
|
1856
|
+
i tetNig1.chrUn_random I 4 N 0
|
|
1857
|
+
s fr1.chrUn 320904310 41 + 349519338 -----TTAGTAAC----------ATCCAACAAGGATCAATCAAGACATA------------CCTTGTC
|
|
1858
|
+
i fr1.chrUn I 4 I 2
|
|
1859
|
+
s danRer4.chrM 14622 53 + 16596 ----TTAAGGACC----------ATCGAATAGCG-TCAATCAAGTCTTACCTAGCCGTCTTCCTTACC
|
|
1860
|
+
i danRer4.chrM I 109 I 6
|
|
1861
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1862
|
+
|
|
1863
|
+
a score=81103.000000
|
|
1864
|
+
s mm8.chrM 13510 86 + 16299 ATTCCTA---ATTAACATCATCTTAATTATTATCTTATAC---TCAAT--------------------TAATCT--CGAGTAATCTCGATAATAATAAAAATACCCGCAAACAA
|
|
1865
|
+
s rn4.chrM 13489 86 + 16300 ATTTCTC---ATCACTATTTCACTAATTTTTATCTTACAC---ACACT--------------------TAATCC--CGAGTGATTTCAATAATAATAAAAATCCCCGCAAACAA
|
|
1866
|
+
i rn4.chrM C 0 C 0
|
|
1867
|
+
s oryCun1.scaffold_140182 13676 86 + 20791 TTTCTTA---ATCTCT-TTACTCTTAGTACTAT-TTATTT---TAACC--------------------TAGCCCCACGAGTAATCTCAATAACAATAAAAATACTAACAAATAA
|
|
1868
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1869
|
+
s hg18.chrM 14106 91 + 16571 TTTCTTC---TTCCCACTCATCCTAACCCTACTCCTAATCACATAACC--------------------TATTCCCCCGAGCAATCTCAATTACAATATATACACCAACAAACAA
|
|
1870
|
+
i hg18.chrM C 0 C 0
|
|
1871
|
+
s panTro2.chrM 13523 91 + 16554 TTTTTTC---TTCCCTCTCATCTTAACCTTACTCCTAATCACATAACC--------------------TATTCCCCCGAGCAATCTCAATCACAATGTATACACCAACAAACAA
|
|
1872
|
+
i panTro2.chrM C 0 C 0
|
|
1873
|
+
s rheMac2.chr5 34449211 91 - 182086969 TTTTTTT---ATCCCATCCCTTCTAACCCTACTCCTAATTATCTAATC--------------------TATCATCCTGAGTAATTTCAATCACAACATAAATACTAACAAATAA
|
|
1874
|
+
i rheMac2.chr5 C 0 C 0
|
|
1875
|
+
s bosTau2.chrM 13877 83 + 16338 CTTCTTA---ATCACAATCCTTATCAGCATAATCTTATTT----------------------------AATTTCCACGAGTAATTTCTATAATAACCACAACACCAATTAATAA
|
|
1876
|
+
i bosTau2.chrM C 0 C 0
|
|
1877
|
+
s canFam2.chrM 13546 83 + 16727 GTTCATA---CTAACTATAATCCTCAGTCTACTAATCCTT----------------------------AATTACCACGGGTAACTTCCATGATAACCAACACACCAATTAATAA
|
|
1878
|
+
i canFam2.chrM C 0 C 0
|
|
1879
|
+
s dasNov1.scaffold_23239 152 87 - 16977 ATTTATT---ATCTCAATAACACTAGCTACTATACTAATC----ATTT--------------------AACGACCACGAGTAATCTCAATTACAATAAAAATGCTAACAAATAA
|
|
1880
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1881
|
+
s loxAfr1.scaffold_17571 30986 87 + 47616 ATTCCTC---CTATCAATTACACTAGGCTTGCTAATTGTC----CTAT--------------------AACGCTTTCGAGTAACCTCAATAACAATAAAAATACTAACAAACAA
|
|
1882
|
+
i loxAfr1.scaffold_17571 C 0 N 0
|
|
1883
|
+
s echTel1.scaffold_181343 12916 87 + 18297 TTTCCTA---TTTACCTTAACCCTAACTTTCCTTTTGATA----ATTT--------------------AACGCCCCCGAGTAATTTCTATCACAATAAAAACACTAACAAATAG
|
|
1884
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1885
|
+
s monDom4.chrUn 117164999 85 + 174229318 CTTTCTG---ATCTCAATTACACT---TCCTCTAATATTC---GCATC--------------------TATGTCCACGAACAACTTCTAACACAACATAGATAGTAATAAATAA
|
|
1886
|
+
i monDom4.chrUn C 0 C 0
|
|
1887
|
+
s fr1.chrUn 320904353 113 + 349519338 CTTCCTCACGACCCTTGCTCTATCAACCCTCGTTCTTCTTACCTAACT-GCTCGAAGAGCCCCCCGACCCAACCCCCGCACCAGCTCTAATACTACAAGCAACGTCAATAACAA
|
|
1888
|
+
i fr1.chrUn I 2 C 0
|
|
1889
|
+
s danRer4.chrM 14681 104 + 16596 ----------ATTCTTAAAATAATAATACTGAAACTATACACTTAAATAGCACGAAGCACACCATAACTAAGACCTCGAGTAACCTCTAGTACAACAAACAAAGTCAGAAGCAA
|
|
1890
|
+
i danRer4.chrM I 6 C 0
|
|
1891
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1892
|
+
e galGal2.chrM 14836 53 + 16775 I
|
|
1893
|
+
|
|
1894
|
+
a score=72627.000000
|
|
1895
|
+
s mm8.chrM 13596 51 + 16299 AGATCACCCAGCTACTACCATCATTCAAGTAGCACAACTATATATTGCCGC
|
|
1896
|
+
s rn4.chrM 13575 51 + 16300 TGACCACCCAGCCACCACTATCATTCAAGTAGCACAACTATAAATAGCCGC
|
|
1897
|
+
i rn4.chrM C 0 C 0
|
|
1898
|
+
s oryCun1.scaffold_140182 13762 51 + 20791 AGATCAACCCGCAACAACCATCAATCAACTACCATAACTATACAACGCCGC
|
|
1899
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1900
|
+
s hg18.chrM 14197 51 + 16571 TGTTCAACCAGTAACCACTACTAATCAACGCCCATAATCATACAAAGCCCC
|
|
1901
|
+
i hg18.chrM C 0 C 0
|
|
1902
|
+
s panTro2.chrM 13614 51 + 16554 TGTCCAACCAGTAACTACTACTAACCAACGCCCATAATCATATAAGGCCCC
|
|
1903
|
+
i panTro2.chrM C 0 C 0
|
|
1904
|
+
s rheMac2.chr5 34449302 51 - 182086969 TGATCAACCAGCAACTACCATTAATCAGCACTCGTAACTGCACAAGGCAGC
|
|
1905
|
+
i rheMac2.chr5 C 0 C 0
|
|
1906
|
+
s bosTau2.chrM 13960 51 + 16338 AGACCACCCAGTTACAATAACTAATCAGGTACCATAACTGTATAAAGCCGC
|
|
1907
|
+
i bosTau2.chrM C 0 C 0
|
|
1908
|
+
s canFam2.chrM 13629 51 + 16727 TGATCAGCCTGTAACAACCACCAACCAAGTCCCATAACTGTACAGAGCCGC
|
|
1909
|
+
i canFam2.chrM C 0 C 0
|
|
1910
|
+
s dasNov1.scaffold_23239 239 51 - 16977 GGATCACCCAGCTAAAATCACCAACCATCCCCCATAAGTATATAAAGCAGA
|
|
1911
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1912
|
+
s echTel1.scaffold_181343 13003 51 + 18297 ACATCACCCCGATAATAATAGCATTCAATTTCCCCCACTATATAAAATTGA
|
|
1913
|
+
i echTel1.scaffold_181343 C 0 I 1
|
|
1914
|
+
s monDom4.chrUn 117165084 51 + 174229318 AATTCATCCTAACAAAGCTAAAGCTCATCCCCCACATCAATATAATAAAGG
|
|
1915
|
+
i monDom4.chrUn C 0 C 0
|
|
1916
|
+
s fr1.chrUn 320904466 51 + 349519338 GACCCAGGCCCCCAATAGTAATACTCCCCCACCGCTAGAATATATAAGTGA
|
|
1917
|
+
i fr1.chrUn C 0 C 0
|
|
1918
|
+
s danRer4.chrM 14785 51 + 16596 TACCCAAGCACAAATCACTAATATTTTTCCACCTGACGAATATATTATTGC
|
|
1919
|
+
i danRer4.chrM C 0 C 0
|
|
1920
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1921
|
+
e galGal2.chrM 14836 53 + 16775 I
|
|
1922
|
+
|
|
1923
|
+
a score=74448.000000
|
|
1924
|
+
s mm8.chrM 13647 214 + 16299 TACCCCAATCCCTCCTTCCAACATAACTCCA---------ACATCATCAACCTCATACATCAACCAATCTCCCAAACCATCAAGATTAATTAC---T---CCAA---CTTCATCA-TAATA-----ATTAAGCAC--ACAAATTAAAAAA--ACCTCTATAATCACCCCCAATACTAAAAAACCCAAAATTAATCAGTTAGATCCCC----AAGTCTCTGGATATTCCTCAGTAGCTATAGCAGTC
|
|
1925
|
+
s rn4.chrM 13626 214 + 16300 AACCCCAATCCCCCCCTCCAACATAACCCCA---------ACATCATCAATCTCATACATTAATCAATCGCCTAGACTATCAAAATCAACTAA---C---TCCA---CCTTATTA-TTCAA-----ACTAAACAA--GTAGAACACTACC--AACTCCATAAAAAGCCCTAAAACAAAAAAACTAAAAATAAACCAATTAGACCCTC----AAGTTTCCGGATATTCCTCAGTAGCCATAGCAGTT
|
|
1926
|
+
i rn4.chrM C 0 C 0
|
|
1927
|
+
s oryCun1.scaffold_140182 13813 217 + 20791 CACCCCTATAGAATCCTCCCGGATTAATCCT---------ACCTCGTCCCCTTCAAAAACCACCCAATCCCCTATATTTTTAAAATCAACCACAATC---TCAA---CCCCATCACTCATC-----ACTATATAC--ACA-ACCAAGCCT--ACCTCTATTAACAACCCTAAAACGAATATACCCAAAATCATAACATTCGATCCTC----AAGTCTCAGGATACTCCTCAGTTGCCATCGCAGTA
|
|
1928
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1929
|
+
s hg18.chrM 14248 217 + 16571 CGCACCAATAGGATCCTCCCGAATCAACCCT---------GACCCCTCTCCTTCATAAATTATTCAGCTTCCTACACTATTAAAGTTTACCACAACC---ACCA---CCCCATCATACTCT-----TTCACCCAC--AGC-ACCAATCCT--ACCTCCATCGCTAACCCCACTAAAACACTCACCAAGACCTCAACCCCTGACCCCC----ATGCCTCAGGATACTCCTCAATAGCCATCGCTGTA
|
|
1930
|
+
i hg18.chrM C 0 C 0
|
|
1931
|
+
s panTro2.chrM 13665 217 + 16554 CGCACCAATAGGATCCTCCCGAATCAGCCCT---------GGCCCCTCCCCTTCATAAATTATTCAACTTCCCACGCTATTAAAATTTACCACAACC---ACCA---TCCCATCATACCCT-----TTTACCCAT--AAC-ACTAATCCT--ACCTCCATCGCCAGTCCTACTAAAACACTAACCAAAACCTCAACCCCTGACCCCC----ATGCCTCAGGATACTCCTCAATAGCCATAGCCGTA
|
|
1932
|
+
i panTro2.chrM C 0 C 0
|
|
1933
|
+
s rheMac2.chr5 34449353 217 - 182086969 CACATATACAGAATCTTCAGGGAACAACCCT---------GCCCTCTCACCCTAAAAAATCCTCCAACTCTTTGTGCTATTAAAATCAATCATGATC---CTCG---CTCTATCGTGCTCA-----ACTATTCAC--AGA-ACCAGCATC--AACTCCATTATTGGTTCTCATAATAAGGCTCCTCAGATGTCAATACTCAACCCTC----ATGTTTCAGGATACTCCTCAGTAGCCATCGCCATG
|
|
1934
|
+
i rheMac2.chr5 C 0 C 0
|
|
1935
|
+
s bosTau2.chrM 14011 217 + 16338 AATCCCTATGGCCTCTTCACTAAAGAACCCA---------GAATCCCCTGTATCATAAATCACCCAATCCCCTAAACCATTAAACTCAAACACAACC---TCAA---CTTCTTTATCCTTT-----AATACATAA--TAG-ACCATAAAG--AACTCCATCAACAAGCCAGTAACAAATGCCCCTAAAACAGCCTTATTAGAAAGCC----AAATTTCAGGATACTGTTCTGTAGCCATAGCCGTT
|
|
1936
|
+
i bosTau2.chrM C 0 C 0
|
|
1937
|
+
s canFam2.chrM 13680 217 + 16727 AATACCCATAGCCTCTTCACTAAAAAACCCA---------GAGTCCCCCGTATCATAGATCACTCAATCCCCTATTCCATTAAACTTTAATACTACC---TCCA---CCTCGTCATCCTTC-----AAAATATAG--CAA-GCAGTCAAC--AATTCAGACAACAAACCAGTAATAAAAGCCGCTAGAACAGCCTTATTTGAAACTC----ACACCTCAGGGTATTGCTCAGTAGCCATAGCAGTT
|
|
1938
|
+
i canFam2.chrM C 0 C 0
|
|
1939
|
+
s dasNov1.scaffold_23239 290 220 - 16977 TCCACCAGCATAATCTTCACGAACAACATCC---------ATCCCATATCCCCCCAAGACAACCCAATCTTCTATATCTTTCAAACCACAAGAAATCAAGCCTA---CTTCACCGTCAACA-----ATCATTCAA--ACA-ATTATCGCA--ACCTCTACTAACAATCCAACAAATAACGCACTCAAAATAACAACGTTAGAACCCC----AAGCCTCAGGATACTCCTCAGTAGCCATAGCAGTA
|
|
1940
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1941
|
+
s loxAfr1.scaffold_3823 111222 219 - 141669 CCCACCAGAATAATCCTCATAAAGAAACTCA---------ATTTCTTCACTATTAAAAACCATTCAATTCTCAAATTACTTGAA-----TCACAACC---TACCAACTCAAATACCCCACC-----TTTCAACAATCACA-ACAATAAAAGCCCCTCCATCAGCAACCCTATAAATAATGTGCCCAAAACTGTAACATTGGATCCCG----AACCCTCAGGATATTCTTCAGCAGCTATTGAAGTC
|
|
1942
|
+
i loxAfr1.scaffold_3823 N 0 N 0
|
|
1943
|
+
s echTel1.scaffold_181343 13055 201 + 18297 CCTGCTAG-ATAATCTTCCCGAATAAAACCA---------ACCTCCTCTCCACTAAATATTACTAAACTCTC------------------TGCACCC---CATATTTTTTCATCGCCCCCT-----TTTAAATAA--ACC-ACGATCAAA--CCCTCAGCTAATAGACCTAGACATAATGAACCTATAACAGTCGTACTCGACATCC----AAATCTCAGGGAACTCTTCAGTAGCTATAGCTGTA
|
|
1944
|
+
i echTel1.scaffold_181343 I 1 C 0
|
|
1945
|
+
s monDom4.chrUn 117165135 190 + 174229318 GACACCACTAAAATCTTGACCAATACAACTT---------ATTAC-------TGTGAAATCAATCAACTC-----AATATTAGAATCTA-CATAAGT---ATTA---CC------------------AAAGATAA--AGT-ATCAT-ATA--ATCTCTATAAGTAATACAAATAATAATATACAAAAAGCCAGGATATTTCCAACTC----AAGTCTCAGGGTATTCTTCTGTAGCCATAGCGGCA
|
|
1946
|
+
i monDom4.chrUn C 0 C 0
|
|
1947
|
+
s fr1.chrUn 320904517 190 + 349519338 AACCCCGTCCATATCACCTCGAAAAACTGCATCTCAGTCTATCTC-------TCCAGAAAC---------CCCTCATCA-----------------C---ACCT---CTTCATCAAGGACCATATTTGTGTACAA--GAT-ACCAAAA----------ACAAAAAAAAAATATCCAAAAAAGAATAAAACCAC----CTGTCAACCTGTAGGCGCCTTAGGATCCTTATCTGCAGACAGCGCTGAC
|
|
1948
|
+
i fr1.chrUn C 0 C 0
|
|
1949
|
+
s danRer4.chrM 14836 187 + 16596 AACCCCGCTTACATCAGCTCGAATAACAGAA---------AACTC-------TTTAAAAGCATCAA----CCGATATTAATAAA-----CCAGTGTC---ACCA---GTTAATAAAAACCC-------------A--GCC-GCCACAATT--------ACAACCAGACCATAAACCATAACACGTCAAAACACCACACGGTCACCCC----ACGCTTCAGGAAAAGGCTCGGCTGCTAGGGCCGCT
|
|
1950
|
+
i danRer4.chrM C 0 C 0
|
|
1951
|
+
e xenTro2.scaffold_19023 379 912 + 3053 I
|
|
1952
|
+
e galGal2.chrM 14836 53 + 16775 I
|
|
1953
|
+
|
|
1954
|
+
a score=1026410.000000
|
|
1955
|
+
s mm8.chrM 13861 280 + 16299 GTATATCCAAACACAACCAACATCCCCCCTAAATAAATTAAAAAAA----CTATTAAACCTAAAAACGATCCACCAAACCCTA---AAACCATTAAACAACCAACAAACCCACTAACAATTAAACCTAAACCTCCATAAATAGGTGAAGGCTTTAATGCTAACCCAAGACAACCAACCAAAAATAATGAACTTAAAACAAAAATAT---AATTAT---T---CATTA--TTTCTACACAGCATTCAACTGCGACCAATGACATGAAAAATCATCGTTGT-AATTCAACTACAGAAAC--AC
|
|
1956
|
+
s rn4.chrM 13840 280 + 16300 GTATACCCAAATACAACCAACATCCCACCCAAATAAATTAAAAATA----CTATTAAACCTAAAAACGAACCCCCAAACCCTA---AAACTATTAAGCACCCAATACATCCACTAACAATCAATCCAAACCCACCATAAATAGGTGAAGGCTTCAACGCCAACCCTAGACAACCAGTCAAAAACAGTAAACTTAAAATAAACATAT---AATTTG---T---CATTA--TTTCTACACAGCATTTAACTGTGACTAATGACATGAAAAATCATCGTTGT-AATTCAACTATAGAAAC--AT
|
|
1957
|
+
i rn4.chrM C 0 C 0
|
|
1958
|
+
s oryCun1.scaffold_140182 14030 277 + 20791 GTATACCCAAAAACTACCAACATCCCCCCTAAATAAATTAAAAACA----TCATTAAACCTAAAAATGAACCCCCGAAACTTA---AAACAATACCACACCCGACCCCACCACTAACAATCAACCCAAGCCCCCCATAAATTGGTGATGGCTTAGAAGAAAACCCAACAAACCCCATCACAAACATTACACTTAATAAAAACACTA---CGTATG---T---CATAG--TTCTCACATGGACTTGAACCATGACTAATGACATGAAAAATCATCGTTGT--TTTCAACTATAAGAAC----
|
|
1959
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1960
|
+
s hg18.chrM 14465 279 + 16571 GTATATCCAAAGACAACCATCATTCCCCCTAAATAAATTAAAAAAA----CTATTAAACCCATATAACCTCCCCCAAAATTCA---GAATAATAACACACCCGACCACACCGCTAACAATCAGTACTAAACCCCCATAAATAGGAGAAGGCTTAGAAGAAAACCCCACAAACCCCATTACTAAACCCACACTCAACAGAAACAAAG---CATACA---T---CATTA--TTCTCGCACGGACTACAACCACGACCAATGATATGAAAAACCATCGTTGT-ATTTCAACTACAAGAAC--A-
|
|
1961
|
+
i hg18.chrM C 0 C 0
|
|
1962
|
+
s panTro2.chrM 13882 279 + 16554 GTATACCCAAAAACAACCATTATTCCCCCCAAATAAATTAAAAAAA----CCATTAAACCTATATAACCTCCCCCATAATTCA---AAATGATGGCACACCCAACTACACCACTAACAATCAATACTAAACCCCCATAAATGGGAGAAGGCTTAGAAGAAAACCCCACAAACCCTATCACTAAACTCACACTCAATAAAAATAAAG---CATATG---T---CATTA--TTCTCGCACGGACTACAACCACGACCAATGATATGAAAAACCATCGTTGT-ATTTCAACTACAAGAAC--A-
|
|
1963
|
+
i panTro2.chrM C 0 C 0
|
|
1964
|
+
s rheMac2.chr5 34449570 282 - 182086969 GTACAGCCATAAACAACCATCATACGACACAAATAAATGAAAAAAAAAATCCATCAACCCCATGAAAGCACCACCAAAATTCA---ACAAAATACCTCAACCCACAGCACCACTAATAATTAGCTGTAGACCTCCGT-AATAGGAGAAGGTTTTGAAGAGAAACCTACAAACCCTATAACCAAAAAGACACTTAAGAAAAATATAG---TATATG---C---CATTA--TTCCTACATGGACGATAACCGTGACTAATGACATGAAAAATCATCATTGT-ATTTAAACTATAAGAAG--G-
|
|
1965
|
+
i rheMac2.chr5 C 0 C 0
|
|
1966
|
+
s bosTau2.chrM 14228 282 + 16338 GTATAACCAAAAACTACCATCATACCTCCCAAATAAATTAAAAAGA----CCATCAACCCCAAAAAGGATCCACCAAAATTCA---ATACAATTCCACAGCCAACCCCACCACTCACAATTAACCCTAACCCCCCATAAATAGGTGAAGGTTTCGAAGAAAACCCCACAAAACCTATCACGAAAATAACGCTTAGAATAAATACAA---TGTATAGTAT---CATTA--TTCTTACATGGAATCTAACCATGACTAATGATATGAAAAACCATCGTTGT-CATTCAACTACAAGAAC--A-
|
|
1967
|
+
i bosTau2.chrM C 0 C 0
|
|
1968
|
+
s canFam2.chrM 13897 282 + 16727 GTATAACCAAATACTACTAATATACCCCCCAAATAAATTAAAAATA----CTATCAACCCTAAAAAAGAACCCCCAAAATTCA---GAACAATCGCACAACCAATCCCACCGCTAATAATTAGCACAAGCCCACCATAAATAGGAGATGGTTTAGTGGCAAAACCCACAAAACTCATCACAAAAACGATACTTAAAATAAATACAA---TGTATGTTAT---CATTA--TTCCTACATGGAATTTAACCATGACTAATGACATGAAAAATCATCGTTGT-ATTTCAACTATAAGAAC--A-
|
|
1969
|
+
i canFam2.chrM C 0 C 0
|
|
1970
|
+
s dasNov1.scaffold_23239 510 279 - 16977 GTATAACCAAACACTACCAACATACCACCTAAATAAACCAAAAAAA----CCATTAATCCTAAAAAAGACCCTCCTAAACCCA---TAACAATACCACAACCCACCCCTCCACCAACAATCAACCCTAACCCCCCATAAATGGGAGACGGCTTTGAAGAGAAGCCAATAAAACTAATCACAAAAGCTACACTTAATAAAAAAACTA---TGTATA---T---CATTATGTTCCAGCATGGAGC-TAACCACGACCAATGATATGAAAAACCATCGTTGTAAATTCAACTACAAGAA-----
|
|
1971
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
1972
|
+
s loxAfr1.scaffold_36650 2 283 + 16266 GTATAACCAAAAACCACTATCATCCCACCCAAATATACCAAAAATA----CAACCAGGCCCAAAAAAGACCCCCCAGAACCCATCCATTAAAAAACACATCCCAAGCCTCCACTCACAACCAAACTCATTCCCCCATAAACAGGGGAAGGCTTAGACGAAAAACCAATGAAACCTACCACATAAAGCACACTCATAATAAAAACAA---TATACA---T---CATTA--CTTCCACATGGACTCCTACCATGACTAATGATCTGAAAAACCATCGTTGT-ATTTCAACTATAGAAAT--AA
|
|
1973
|
+
i loxAfr1.scaffold_36650 N 0 C 0
|
|
1974
|
+
s echTel1.scaffold_181343 13256 280 + 18297 GTATAACCAAAAACCACCAGTATACCACCCAAATAAACCAAAAACA----CTATTAACCCCAAAAATGCCCCACCAAAATATA---GTACAACCCCACACCCAACCCCTCCCCCAATGATCAAGCCTAACCCACCATAAATAGGTGACGGCTTACAAGAAAATCCTACAAAACTGACTACAAATAGAACACTCATCAAAAATAAAA---TAAATT---T---CACAA--TTCTTGCTTGGGCATAAACCAAAACCTGTGGAATGAAACTCCACCGTTGT-TATTCAACTACAAAAAC--CT
|
|
1975
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
1976
|
+
s monDom4.chrUn 117165325 277 + 174229318 GTATAACCAAACACTACTAACATACCCCCTAAATAAACTAAAAAAA----CTACAAGTCCTAAAAAAGAATCTTCAAAGTTAA---CTACTATAACACACCCCAAACCACCACTTGCAACTAAACTTAATCCTCCATAAACAGGAGAAGGTTTAGAAGAAAATGCCACAAACCCAAAAATCAAAAGCAAAGAAATAATAAAAATTA---TTATCA---T---TGTTA--TTTTAGCATGGATTTTAACCATAACCTATGGCATGAAAAACCATTGTTGT-GTTTCAACTACAAAAA-----
|
|
1977
|
+
i monDom4.chrUn C 0 C 0
|
|
1978
|
+
s xenTro2.scaffold_18302 3 264 + 2726 ---------------ACCAACATCCCACCTAAATAAATTAAAAACA----AAACAAGAGATAAAAAGGAAGACCCCAATCCAA---CAATCACTCAACAACCCGCACCGGCAGCCACAACTAAACCCAGAGCAGCATAATAAGGAGAAGGGTTTGAAGCAACAGCTACTAACCCTAGTACTAAGCCTACTATAAAAAAAGAAACTA---TATAAA---T---CATAA--TTCCCATCAGGACTCTAACCAGAACCTGTGATCTGAAAAACCACTGTTGT-TCTTCAACTATGGAAAC--T-
|
|
1979
|
+
i xenTro2.scaffold_18302 n 912 I 1
|
|
1980
|
+
s fr1.chrUn 320904707 279 + 349519338 GAATAAATAAACACAACCAGTATGCCCCCCATATAAATCATTAACA----ACACCAAAGACAAGAAAGTCCCCCCGTGCAAAA---CTGAAGCCCCACAGCAAAGAAGTGCAACCAGCACCAAATTGAAAACTCCATAAAAAGGAGCAGGATTTGTAGACAACACAATTAT---CACAACCAACATCCCTAATAAAAGAAAAACAAGCGCATAAA---A---CATAG--TTTCTGCCAGGATTTTAACCAGGACCTATGGCGTGAAAAACCATCGTTGT-TACTCAACTACAAAAAC--A-
|
|
1981
|
+
i fr1.chrUn C 0 C 0
|
|
1982
|
+
s danRer4.chrM 15023 281 + 16596 GAATAAGCAAACACTACAAGCATCCCACCTAAATAAATCAAAAAAA----GAATTAGAGACAAAAATGAACCCCCATAACTAA---CTAAAATTCCACATCCAACCCCTGCCACAACTACTAAACCAAATGCAGCAAAATAAGGAGCCGGATTAGAAGCAATAGCAATCATACCCCCAACTAGAGCTGCCATCAAA--AAAGACAA----ATAAA---ATGCCATAA--TTCTTACTCAGACTTTAACTGAGACCGGTGACTCGAAAAACCACTGTTGT-AGTTCAACTACAAGAACTGC-
|
|
1983
|
+
i danRer4.chrM C 0 C 0
|
|
1984
|
+
e galGal2.chrM 14836 53 + 16775 I
|
|
1985
|
+
|
|
1986
|
+
a score=2289633.000000
|
|
1987
|
+
s mm8.chrM 14141 388 + 16299 C----TAATGA---CAAACATACGAAAAACACACCCATTATTTAAAATTATTAACCACTCATTCATTGACCTACCTGCCCCATCCAACATTTCATCATGATGAAACTTTGGGTCCCTTCTAGGAGTCTGCCTAATAGTCCAAATCATTACAGGTCTTTTCTTAGCCATACACTACACATCAGATACAATAACAGCCTTTTCATCAGTAACACACATTTGTCGAGACGTAAATTACGGGTGACTAATCCGATATATACACGCAAACGGAGCCTCAATATTTTTTATTTGCTTATTCCTTCATGTCGGACGAGGCTTATATTATGGATCATATACATTTATAGAAACCTGAAACATTGGAGTACTTCTACTGTTCGCAGTCATAGCCACAGCATTTA
|
|
1988
|
+
s rn4.chrM 14120 388 + 16300 C----TAATGA---CAAACATCCGAAAATCTCACCCCCTATTCAAAATCATCAACCACTCCTTTATCGACCTACCGGCCCCATCTAACATCTCATCATGATGAAACTTCGGTTCTCTACTAGGAGTATGCCTCATAGTACAAATCCTCACAGGCTTATTCCTAGCAATACACTACACGTCTGATACCATAACAGCATTCTCATCAGTCACCCACATCTGCCGAGACGTAAACTACGGCTGACTAATCCGATACCTACAAGCCAACGGCGCCTCAATATTTTTCATCTGCCTATTCCTCCATGTGGGACGAGGACTATACTATGGATCCTACACTTTCCTAGAAACCTGAAACATTGGGATCATCCTACTATTTGCAGTCATAGCAACTGCATTCA
|
|
1989
|
+
i rn4.chrM C 0 C 0
|
|
1990
|
+
s oryCun1.scaffold_140182 14307 388 + 20791 C----TAATGA---CCAACATTCGCAAAACCCACCCCCTATTAAAAATTGTTAACCACTCCCTAATTGACCTTCCTGCTCCATCAAACATCTCTGCCTGATGAAACTTTGGCTCTCTACTAGGCCTGTGCCTTATAATTCAAATTTTCACTGGCCTATTCTTAGCCATACACTATACCTCTGACACAACAACAGCATTCTCATCAGTAACCCATATTTGCCGAGATGTTAACTATGGCTGACTTATCCGATACCTCCACGCTAACGGAGCATCTATATTCTTTATTTGCCTCTACATACACGTAGGCCGCGGAATCTACTATGGATCATACACATACCTAGAGACCTGAAACATTGGCATCATCCTCCTATTCGCAGTAATAGCCACAGCATTTA
|
|
1991
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
1992
|
+
s hg18.chrM 14744 388 + 16571 C----CAATGA---CCCCAATACGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCTCCCCACCCCATCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGCCATACACTACTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCACATCACTCGAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCCAATGGCGCCTCAATATTCTTTATCTGCCTCTTCCTACACATCGGGCGAGGCCTATATTACGGATCATTTCTCTACTCAGAAACCTGAAACATCGGCATTATCCTCCTGCTTGCAACTATAGCAACAGCCTTCA
|
|
1993
|
+
i hg18.chrM C 0 C 0
|
|
1994
|
+
s panTro2.chrM 14161 388 + 16554 C----CAATGA---CCCCGACACGCAAAATTAACCCACTAATAAAATTAATTAATCACTCATTTATCGACCTCCCCACCCCATCCAACATTTCCGCATGATGGAACTTCGGCTCACTTCTCGGCGCCTGCCTAATCCTTCAAATTACCACAGGATTATTCCTAGCTATACACTACTCACCAGACGCCTCAACCGCCTTCTCGTCGATCGCCCACATCACCCGAGACGTAAACTATGGTTGGATCATCCGCTACCTCCACGCTAACGGCGCCTCAATATTTTTTATCTGCCTCTTCCTACACATCGGCCGAGGTCTATATTACGGCTCATTTCTCTACCTAGAAACCTGAAACATTGGCATTATCCTCTTGCTCACAACCATAGCAACAGCCTTTA
|
|
1995
|
+
i panTro2.chrM C 0 C 0
|
|
1996
|
+
s rheMac2.chr5 34449852 384 - 182086969 C----TAATGG---CCAATATCTACAAAACACACCTGCtaataaaaattattaattattCATT----GATCATCCCACATCATCTAACATTTCTATATGATGAAACTTCGGCTCACTTTTAGGTGCCTGCCTAACCCTCCAAATCATTACAGGACTGTTTTTGGCCATGAACTACACATCAGACACCCCAACGGCCTTCTCTTCAGACGCTCATATCAGCTGAGATGTAAACTTCGACTGAATGGTTTGCTATTTCCATGCTAATGGCGCTTCAATATTTTTTATCTGCCTCTTCTTACATGTTGGCTGAGGTTTATGCCATGGATCATTTACATTTCTAGAAATGTGAAATATTGGCATCATCCTCCTACTCAAAACAATGGCAACAGCACTCA
|
|
1997
|
+
i rheMac2.chr5 C 0 C 0
|
|
1998
|
+
s bosTau2.chrM 14510 388 + 16338 C----TAATGA---CTAACATTCGAAAGTCCCACCCACTAATAAAAATTGTAAACAATGCATTCATCGACCTTCCAGCCCCATCAAACATTTCATCATGATGAAATTTCGGTTCCCTCCTGGGAATCTGCCTAATCCTACAAATCCTCACAGGCCTATTCCTAGCAATACACTACACATCCGACACAACAACAGCATTCTCCTCTGTTACCCATATCTGCCGAGACGTGAACTACGGCTGAATCATCCGATACATACACGCAAACGGAGCTTCAATGTTTTTTATCTGCTTATATATGCACGTAGGACGAGGCTTATATTACGGGTCTTACACTTTTCTAGAAACATGAAATATTGGAGTAATCCTTCTGCTCACAGTAATAGCCACAGCATTTA
|
|
1999
|
+
i bosTau2.chrM C 0 C 0
|
|
2000
|
+
s canFam2.chrM 14179 388 + 16727 T----TAATGA---CCAACATTCGAAAAACCCACCCACTAGCCAAAATTGTTAATAACTCATTCATTGACCTCCCAGCGCCGTCTAACATCTCTGCTTGATGGAACTTCGGATCCTTACTAGGAGTATGCTTGATTCTACAGATTCTAACAGGTTTATTCTTAGCTATGCACTATACATCGGACACAGCCACAGCTTTTTCATCAGTCACCCACATCTGCCGAGACGTTAACTACGGCTGAATTATCCGCTATATGCACGCAAATGGCGCTTCCATATTCTTTATCTGCCTATTCCTACATGTAGGACGAGGCCTATATTACGGATCCTATGTATTCATAGAAACATGAAACATTGGAATTGTACTATTATTCGCAACCATAGCCACAGCATTCA
|
|
2001
|
+
i canFam2.chrM C 0 C 0
|
|
2002
|
+
s dasNov1.scaffold_23239 789 388 - 16977 C----TAATGA---CCAACATCCGTAAAAACCACCCACTCCTAAAAATCGTAAACCAATCATTCATTGACTTACCAACACCAACAAGCATTTCAGCATGATGAAACTTCGGTTCATTGCTGGGCATCTGCCTAGCAATGCAAATTCTTACAGGCTTATTCCTAGCAATACACTATACATCAGACACCATAACAGCCTTCTCATCTGTAACTCACATCTGCCGAGACGTAAACTATGGCTGATTAATTCGTTACCTACATGCCAACGGCGCATCCCTATTCTTCATATGCCTATACCTCCATATCGGCCGAGGCTTGTACTACGGCTCATACACCTTCCTAGAAACTTGAAACATCGGAATTATCCTATTATTCACCGTTATAGCCACAGCATTTA
|
|
2003
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2004
|
+
s loxAfr1.scaffold_36650 285 392 + 16266 TCAAATAATGA---CCCACATTCGAAAATCTCACCCCTTACTTAAAATCATCAATAAATCCTTCATTGATCTACCTACCCCATCCAACATCTCAACATGATGAAATTTCGGCTCACTACTAGGAGCATGCCTAATTACCCAAATCCTAACAGGATTATTCCTAGCCATACATTATACACCCGACACAATAACTGCATTTTCATCTATATCCCATATTTGCCGAGATGTGAACTACGGCTGAATTATTCGACAACTACACTCAAACGGAGCATCCATTTTCTTCCTCTGCCTATACACACACATTGGACGAAACATCTACTATGGGTCCTACCTATACTCGGAAACTTGAAATACCGGCATTATATTACTACTAATCACCATAGCCACCGCCTTCA
|
|
2005
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2006
|
+
s echTel1.scaffold_181343 13536 388 + 18297 T----TAATGA---CCAACATCCGAAAAACCCACCCACTAGCCAAGATTATTAACAGTTCCTTCATTGATCTCCCAGCCCCAACCAACATCTCATCATGATGAAACTTCGGTTCTCTACTAGGTATTTGTTTAGTTCTACAGATCATTACAGGCCTATTTTTAGCTATGCACTATACATCAGACACAATTACAGCATTCTCATCAATTGCCCACATCTCTCGAGATGTAAACTACGGTTGATTAATCCGTTATTTGCATGCCAACGGAGCATCACTATTCTTTATCTGCTTGTATCTTCATATTGGCCGAGGAATCTATTACGGCTCCTATATATTCTCTGAGACATGAAACATTGGTATTATCCTCCTATTTGCTGTGATAGCCACTGCATTCA
|
|
2007
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2008
|
+
s monDom4.chrUn 117165602 388 + 174229318 T----TAATGA---CCAACCTTCGAAAAAACCACCCCCTAATAAAAATTATTAACCACTCATTCATTGACCTACCAGCCCCTTCCAATATCTCTGCTTGATGGAACTTTGGATCACTTTTAGGCATATGTTTAATTATTCAAATCCTAACAGGACTATTTCTAGCCATACATTATACATCAGACACTCTAACCGCTTTTTCATCAGTAGCACATATTTGCCGAGATGTTAACTACGGATGACTGATCCGAAATCTACATGCTAACGGAGCTTCAATATTCTTTATATGTTTATTCCTTCACGTAGGACGAGGAATTTACTATGGTTCCTACCTGTATAAAGAAACCTGAAACATCGGAGTGATTCTCATACTTACTGTAATAGCCACTGCCTTCG
|
|
2009
|
+
i monDom4.chrUn C 0 C 0
|
|
2010
|
+
s galGal2.chrM 14889 391 + 16775 C----TAATGGCACCCAACATTCGAAAATCCCACCCCCTACTAAAAATAATTAACAACTCCCTAATCGACCTCCCAGCCCCATCCAACATCTCTGCTTGATGAAATTTCGGCTCCCTATTAGCAGTCTGCCTCATGACCCAAATCCTCACCGGCCTACTACTAGCCATGCACTACACAGCAGACACATCCCTAGCCTTCTCCTCCGTAGCCCACACTTGCCGGAACGTACAATACGGCTGACTCATCCGGAATCTCCACGCAAACGGCGCCTCATTCTTCTTCATCTGTATCTTCCTTCACATCGGACGAGGCCTATACTACGGCTCCTACCTCTACAAGGAAACCTGAAACACAGGAGTAATCCTCCTCCTCACACTCATAGCCACCGCCTTTG
|
|
2011
|
+
i galGal2.chrM I 53 C 0
|
|
2012
|
+
s xenTro2.scaffold_18302 268 388 + 2726 -------ATGGCACCAAACATTCGAAAATCTCATCCACTTATCAAAATTGTTAATAACTCATTTATTGACCTACCAACCCCATCAAACCTATCCTCGTGATGAAACTTCGGCTCCCTTCTAGGGGTCTGCTTAATTGCCCAGATCGCTACAGGTTTATTCCTAGCAATACACTACACAGCAGACACCTCTATAGCCTTCTCATCAGTCGCCCACATCTGCCGAGACGTTAACTACGGCTGACTAATCCGTAACCTTCACGCAAACGGCGCATCCTTCTTCTTTATCTGTATTTATCTACACATTGGCCGAGGGTTGTATTATGGATCATTCCTCTACAAAGAAACATGAAATATTGGAGTCATCCTCTTATTCCTAGTCATAGCCACTGCATTTG
|
|
2013
|
+
i xenTro2.scaffold_18302 I 1 C 0
|
|
2014
|
+
s fr1.chrUn 320904986 388 + 349519338 C----TAATGG---CCAGCCTACGCAAAACCCACCCCCTACTAAAAATCGTAAACGACATAGTAATTGACCTTCCTACCCCCTCAAACATTTCCGCCTGATGAAACTTTGGCTCTCTACTCGGATTATGCCTTATTACACAAATCATCACAGGACTGTTCCTTGCAATACACTACACATCCGACATCTCTACCGCCTTTTCATCCGTAGCCCACATTTGCCGAGACGTAAACTACGGCTGACTAATTCGCAATCTACACGCAAACGGTGCCTCATTCTTTTTTATTTGCTTATACTCCCACATCGGCCGAGGTCTTTACTATGGCTCTTACCTAAGTAAAGAAACCTGAAACGTAGGGGTAGTCCTCTTACTTTTAGTAATGGCCACCGCTTTCG
|
|
2015
|
+
i fr1.chrUn C 0 C 0
|
|
2016
|
+
s danRer4.chrM 15304 388 + 16596 T----TAATGA---CAAGCCTGCGAAAAACACACCCAGTTTTAAAAATCGCTAATGACGCATTAGTTGATTTGCCAACGCCACTAAATATTTCAGCGTGATGAAATTTTGGATCTCTCCTTGGATTATGTCTTATTACACAAATTTTAACAGGACTATTTTTAGCAATACACTACACCTCAGACATCTCAACAGCATTTTCATCTGTTGTGCATATTTGCCGAGATGTAAATTTCGGCTGACTTATTCGGAGCATCCATGCCAATGGGGCTTCCTTCTTCTTCATCTGCCTGTATATTCACATCGCCCGAGGACTATATTACGGATCTTATCTTTATAATGAAACTTGAAACATCGGAGTAGTCCTGTTCTTACTTGTAATAATAACAGCTTTTG
|
|
2017
|
+
i danRer4.chrM C 0 C 0
|
|
2018
|
+
|
|
2019
|
+
a score=1831171.000000
|
|
2020
|
+
s mm8.chrM 14529 256 + 16299 TAGGCTACGTCCTTCCATGAGGACAAATATCATTCTGAGGTGCCACAGTTATTACAAACCTCCTATCAGCCATCCCATATATTGGAACAACCCTAGTCGAATGAATTTGAGGGGGCTTCTCAGTAGACAAAGCCACCTTGACCCGATTCTTCGCTTTCCACTTCATCTTACCATTTATTATCGCGGCCCTAGCAATCGTTCACCTCCTCTTCCT-CCACGAAACAGGATCAAACAACCCAACAGGATTAAACTCAGA
|
|
2021
|
+
s rn4.chrM 14508 256 + 16300 TGGGCTATGTACTCCCATGAGGACAAATATCATTCTGAGGAGCTACAGTAATTACAAACCTATTATCAGCTATCCCTTACATTGGGACTACCCTAGTCGAATGAATCTGAGGAGGCTTCTCAGTAGACAAAGCAACCCTAACACGCTTCTTCGCATTCCACTTCATCCTCCCATTCATTATCGCCGCCCTTGCAATTGTACATCTTCTTTTCCT-CCACGAAACAGGATCAAATAACCCCACAGGATTAAACTCCGA
|
|
2022
|
+
i rn4.chrM C 0 C 0
|
|
2023
|
+
s oryCun1.scaffold_140182 14695 256 + 20791 TGGGTTATGTCCTCCCATGAGGACAAATATCATTTTGGGGGGCAACCGTAATCACTAACCTCCTATCAGCAATCCCATATATCGGAACAACCTTAGTTGAATGAATCTGAGGAGGATTTTCAGTTGATAAAGCCACTCTTACCCGATTCTTCGCTTTTCACTTCATCTTGCCATTTATCATCGCAGCTTTAGTCTTAATTCACCTCCTCTTTCT-ACATGAAACTGGCTCCAACAACCCTACAGGAATTCCTTCAAA
|
|
2024
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2025
|
+
s hg18.chrM 15132 256 + 16571 TAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACAGTAATTACAAACTTACTATCCGCCATCCCATACATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCTTACCCTTCATTATTGCAGCCCTAGCAGCACTCCACCTCCTATTCTT-GCACGAAACGGGATCAAACAACCCCCTAGGAATCACCTCCCA
|
|
2026
|
+
i hg18.chrM C 0 C 0
|
|
2027
|
+
s panTro2.chrM 14549 256 + 16554 TGGGCTATGTCCTCCCATGAGGCCAAATATCCTTCTGAGGAGCCACAGTAATTACAAACCTACTGTCCGCTATCCCATACATCGGAACAGACCTGGTCCAGTGAGTCTGAGGAGGCTACTCAGTAGACAGCCCTACCCTTACACGATTCTTCACCTTCCACTTTATCTTACCCTTCATCATCACAGCCCTAACAACACTTCATCTCCTATTCTT-ACACGAAACAGGATCAAATAACCCCCTAGGAATCACCTCCCA
|
|
2028
|
+
i panTro2.chrM C 0 C 0
|
|
2029
|
+
s rheMac2.chr5 34450236 255 - 182086969 TAGGCTACGTGCTCCCATGAGGCCAGACATCATTCTGAGGCACTACAATAATTACAAATCTACTATCAGTCATCTCATATATTGGAACTGACCTAATGCAATAAATCTGAGGTGGGTTCTCAGTTGACAAAGCCACCCTTACACGATTCTTCGCTTTCCATTTCATCTTA-CCTTCATCTTTACAGCCCTAGCAGCTGTTCACCTTTTATTCCT-ACATGAAACAGGATCTAATAACGCTTCAGGGGTTTCATCAGT
|
|
2030
|
+
i rheMac2.chr5 C 0 C 0
|
|
2031
|
+
s bosTau2.chrM 14898 256 + 16338 TAGGATACGTCCTACCATGAGGACAAATATCATTCTGAGGAGCAACAGTCATCACCAACCTCTTATCAGCAATCCCATACATCGGCACAAATTTAGTCGAATGAATCTGAGGCGGATTCTCAGTAGACAAAGCAACCCTTACCCGATTCTTCGCTTTCCATTTTATCCTTCCATTTATCATCATAGCAATTGCCATAGTCCACCTACTATTCCT-CCACGAAACAGGCTCCAACAACCCAACAGGAATTTCCTCAGA
|
|
2032
|
+
i bosTau2.chrM C 0 C 0
|
|
2033
|
+
s canFam2.chrM 14567 256 + 16727 TGGGCTATGTACTACCATGAGGACAAATATCATTTTGAGGAGCAACTGTAATCACTAATCTTCTCTCTGCCATCCCTTATATCGGAACTGACTTAGTAGAATGGATCTGAGGCGGCTTCTCAGTGGACAAAGCAACCCTAACACGATTCTTTGCATTCCATTTCATCCTCCCTTTCATCATCGCAGCTCTAGCAATAGTACACCTCCTATTTCT-ACACGAAACCGGATCCAACAACCCTTCAGGAATCACATCAGA
|
|
2034
|
+
i canFam2.chrM C 0 C 0
|
|
2035
|
+
s dasNov1.scaffold_23239 1177 256 - 16977 TAGGTTATGTCCTACCATGAGGACAAATATCATTCTGAGGGGCCACAGTAATTACCAACCTATTATCTGCCATCCCCTACATTGGAACCGACCTAGTAGAATGAATCTGAGGTGGCTTCTCAGTAGACAAAGCAACTCTAACACGCTTCTTCGCCTTCCACTTCATCTTACCATTTATTATCACAGCACTCGTAGTAGTCCACCTGTTATTCCT-ACACGAAACAGGATCAAACAACCCCACAGGTATCTCGTCAAA
|
|
2036
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2037
|
+
s loxAfr1.scaffold_36650 677 256 + 16266 TAGGATATGTCCTTCCGTGAGGACAAATATCATTCTGAGGGGCAACCGTAATCACTAACCTTTTCTCAGCAATCCCTTATATCGGCACAAACCTAGTAGAATGAATCTGAGGAGGCTTTTCAGTAGATAAAGCAACCTTAAATCGATTTTTCGCCCTCCATTTCATTCTCCCATTTACTATAATTGCACTAGCAGGAGTACACCTAACCTTTCT-TCACGAAACAGGCTCAAACAATCCACTGGGCCTCACTTCAGA
|
|
2038
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2039
|
+
s echTel1.scaffold_181343 13924 256 + 18297 TAGGCTATGTACTTCCATGAGGTCAAATATCTTTTTGAGGTGCAACCGTTATTACTAACCTACTTTCAGCTATTCCTTATATTGGCTCCAATCTTGTTGAGTGAATTTGAGGGGGCTTCTCAGTAGATAAAGCTACATTAACCCGTTTTTTTGCATTTCACTTTATTTTACCATTTATTGTCACTGCCTTAGTAATTATTCATCTACTGTTCCT-CCACGAATCGGGCTCCAATAACCCTACAGGAATCATTTCAGA
|
|
2040
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2041
|
+
s monDom4.chrUn 117165990 256 + 174229318 TAGGCTATGTACTCCCATGAGGACAAATATCCTTTTGAGGGGCTACAGTTATTACTAACCTTTTATCAGCCATTCCATACATTGGTAATACTCTAGTAGAATGAATCTGAGGCGGATTTTCAGTTGACAAAGCTACATTAACTCGATTCTTCGCATTCCATTTTATTTTACCTTTCATTATCCTTGCATTAGTTATTGTTCACCTCCTATTCCT-ACATGAGACCGGATCAAATAATCCTACAGGAATTAACCCCAA
|
|
2042
|
+
i monDom4.chrUn C 0 C 0
|
|
2043
|
+
s galGal2.chrM 15280 256 + 16775 TGGGCTATGTTCTCCCATGGGGCCAAATATCATTCTGAGGGGCCACCGTTATCACAAACCTATTCTCAGCAATTCCCTACATTGGACACACCCTAGTAGAGTGAGCCTGAGGGGGATTTTCAGTCGACAACCCAACCCTTACCCGATTCTTCGCTTTACACTTCCTCCTCCCCTTTGCAATCGCAGGTATTACTATCATCCACCTCACCTTCCT-ACACGAATCAGGCTCAAACAACCCCCTAGGCATCTCATCCGA
|
|
2044
|
+
i galGal2.chrM C 0 C 0
|
|
2045
|
+
s xenTro2.scaffold_18302 656 256 + 2726 TCGGATACGTCCTCCCCTGAGGACAAATATCTTTCTGAGGGGCCACAGTAATTACTAATCTTCTCTCTGCTATTCCGTACATCGGAAACGTACTAGTCCAATGAATCTGGNGAGGATTCTCAGTAGACAACGCTACCTTAACCCGATTTTTTGCCTTCCACTTCCTCCTACCTTTCCTTATTGCAGGAGCCAGCATCCTCCACTTACTGTTCCTCCCATGAAACTGGATCAACAAACCCCACA-GACTAAACTCGGA
|
|
2046
|
+
i xenTro2.scaffold_18302 C 0 M 685
|
|
2047
|
+
s tetNig1.chrUn_random 103508045 256 + 171761319 TAGGCTACGTCCTCCCCTGAGGACAGATGTCTTTCTGAGGCGCAACCGTCATCACAAACCTCCTATCCGCTGTCCCTTACGTAGGAAATACCCTTGTTCAATGAGTCTGAGGCGGTTTCTCAGTTGACCACGCAACTCTCACCCGATTTTTTGCTTTCCACTTCCTACTGCCATTCATCGTCGCAGCCGCTGTCATTGTACACCTCATTTTCCT-TCACGAAACCGGCTCAAACAACCCCCTAGGATTAAACTCCGA
|
|
2048
|
+
i tetNig1.chrUn_random N 0 C 0
|
|
2049
|
+
s fr1.chrUn 320905374 256 + 349519338 TAGGCTACGTTCTCCCATGAGGACAAATATCCTTCTGAGGCGCCACTGTAATTACAAACCTGCTCTCTGCTGTCCCCTACGTAGGAAACACGCTCGTTCAATGAGTATGAGGAGGCTTTTCAGTAGACAGCGCCACTCTAACACGATTCTTTGCCTTCCACTTCCTCCTCCCATTTATCGTTGCAGCCGCTGCCATCGTACATCTTATTTTTCT-TCACGAAACAGGCTCCAACAATCCCCTAGGACTTAATTCAAA
|
|
2050
|
+
i fr1.chrUn C 0 C 0
|
|
2051
|
+
s danRer4.chrM 15692 256 + 16596 TGGGCTACGTCCTTCCATGGGGCCAAATATCATTCTGAGGGGCCACAGTAATTACTAACCTATTATCGGCCGTTCCTTACGTGGGAGATACCCTAGTGCAATGAATCTGAGGGGGATTCTCAGTAGACAATGCAACCCTTACACGATTCTTCGCATTCCACTTTTTATTACCATTTATTATCATCGCCATAGTTATTCTACACTTGCTATTTCT-CCACGAAACCGGATCAAATAACCCCCTTGGCCTAAACCCCAA
|
|
2052
|
+
i danRer4.chrM C 0 C 0
|
|
2053
|
+
|
|
2054
|
+
a score=1289207.000000
|
|
2055
|
+
s mm8.chrM 14785 195 + 16299 TGCAGATAAAATTCCATTTCACCCCTACTATACAATCAAAGATATCCTAGGTATCCTAATCATATTCTTAATTCTCATAACCCTAGTATTATTTTTCCCAGACATACTAGGAGACCCAGACAACTACATACCAGCTAATCCACTAAACACCCCACCCCATATTAAACCCGAATGATATTTCCTATTTGCATACGC
|
|
2056
|
+
s rn4.chrM 14764 195 + 16300 CGCAGACAAAATCCCATTCCATCCATATTATACAATTAAAGACCTCCTAGGTGTATTTATATTACTATTATTCCTAATAACCCTAGTACTATTCTTCCCAGACCTACTAGGAGACCCAGACAATTATACACCCGCTAACCCCCTCAACACCCCACCCCACATCAAACCAGAATGATACTTTCTCTTTGCCTACGC
|
|
2057
|
+
i rn4.chrM C 0 C 0
|
|
2058
|
+
s oryCun1.scaffold_140182 14951 195 + 20791 CTCAGATAAAATCCCTTTCCACCCCTACTACACAATCAAAGACACCCTAGGTTTCCTTGTAGCCATTCTTCTCCTCCTTATTTTAGTCCTATTTTCACCAGACCTATTAGGAGACCCAGACAACTACACCCCTGCCAACCCCCTTAATACCCCTCCCCATATCAAACCAGAATGATACTTCCTATTTGCCTACGC
|
|
2059
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2060
|
+
s hg18.chrM 15388 195 + 16571 TTCCGATAAAATCACCTTCCACCCTTACTACACAATCAAAGACGCCCTCGGCTTACTTCTCTTCCTTCTCTCCTTAATGACATTAACACTATTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCTACAC
|
|
2061
|
+
i hg18.chrM C 0 C 0
|
|
2062
|
+
s panTro2.chrM 14805 195 + 16554 CTCCGACAAAATTACCTTCCACCCCTACTACACAATCAAAGATATCCTTGGCTTATTCCTTTTCCTCCTTATCCTAATGACATTAACACTATTCTCACCAGGCCTCCTAGGCGATCCAGACAACTATACCCTAGCTAACCCCCTAAACACCCCACCCCACATTAAACCCGAGTGATACTTTCTATTTGCCTACAC
|
|
2063
|
+
i panTro2.chrM C 0 C 0
|
|
2064
|
+
s rheMac2.chr5 34450491 195 - 182086969 CCCCGACAACATTACTTTCCACCCCTGCCATACAACCAAAGATATTTTAGGTTTGATTTTTCTCCTCTTCCTCCTGATAATTCTAGTACTATTTTTGCCTGACCTCCTGGGTGACCCAGATAACTAAGTACTAGCCAACCCCATCAACACCCCATCCCACATTAAGCCGGAATGGTACTTTTTGTTTGCCTATGC
|
|
2065
|
+
i rheMac2.chr5 C 0 N 0
|
|
2066
|
+
s bosTau2.chrM 15154 195 + 16338 CGTAGACAAAATCCCATTCCACCCCTACTATACCATTAAGGACATCTTAGGGGCCCTCTTACTAATTCTAGCTCTAATACTACTAGTACTATTCGCACCCGACCTCCTCGGAGACCCAGATAACTACACCCCAGCCAATCCACTCAACACACCCCCTCACATCAAACCCGAGTGATACTTCTTATTTGCATACGC
|
|
2067
|
+
i bosTau2.chrM C 0 C 0
|
|
2068
|
+
s canFam2.chrM 14823 195 + 16727 CTCAGACAAAATTCCATTTCACCCTTACTACACAATCAAGGATATCCTAGGAGCCTTACTCCTACTCCTAATCCTAATATCACTAGTTTTATTTTCACCTGACCTATTAGGAGACCCAGATAACTACACCCCTGCAAACCCCCTAAACACCCCTCCACATATTAAACCTGAGTGATATTTTCTATTCGCCTATGC
|
|
2069
|
+
i canFam2.chrM C 0 C 0
|
|
2070
|
+
s dasNov1.scaffold_23239 1433 195 - 16977 CATAGACACAATCCCATTCCACCCGTACTATACAATTAAAGATATCCTAGGCTTAATTCTCATAATCCTGCTTCTAATAACATTAGTTCTATTTTACCCAGACCTACTAGGAGACCCAGACAACTACACCCCAGCAAACCCACTGAACACTCCACCCCATATTAAACCAGAATGATATTTTCTATTTGCCTACGC
|
|
2071
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2072
|
+
s loxAfr1.scaffold_36650 933 195 + 16266 CTCAGACAAAATCCCCTTTCACCCATACTATACCATTAAGGACTTCCTAGGATTACTTATCCTAATTTTACTTCTTCTACTCCTAGCCCTACTATCTCCTGACATACTAGGAGACCCTGACAACTACATACCAGCCGACCCACTAAATACTCCCCTACATATCAAGCCAGAGTGATATTTTCTCTTTGCTTACGC
|
|
2073
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2074
|
+
s echTel1.scaffold_181343 14180 195 + 18297 TTCTGATAAAATCCCCTTTCACCCTTACTATACAATTAAAGATCTTCTAGGCCTAATAGTTATAATTATATTTCTTCTTATATTAGTCCTATTTACTCCTGACCTTCTTGGAGACCCCGATAATTTTACCCCTGCTAACCCCTTAGTTACCCCACCCCATATCAAACCAGAATGATATTTTCTGTTTGCATATGC
|
|
2075
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2076
|
+
s monDom4.chrUn 117166246 195 + 174229318 CTCAGACAAAATTCCATTTCACCCCTACTACACTATCAAAGACGCCCTAGGCCTAATCCTTATACTTCTTATTTTAATATCACTAGCAATATTCTCACCCGACATACTAGGTGACCCAGACAATTTCTCACCAGCCAACCCATTAAACACTCCTCCACATATTAAACCAGAATGATATTTCCTATTTGCCTATGC
|
|
2077
|
+
i monDom4.chrUn C 0 C 0
|
|
2078
|
+
s galGal2.chrM 15536 195 + 16775 CTCTGACAAAATTCCATTTCACCCATACTACTCCTTCAAAGACATTCTGGGCTTAACTCTCATACTCACCCCATTCCTAACACTAGCCCTATTCTCCCCCAACCTCCTAGGAGACCCAGAAAACTTCACCCCAGCAAACCCACTAGTAACCCCCCCACATATCAAACCAGAATGATATTTTCTATTCGCCTATGC
|
|
2079
|
+
i galGal2.chrM C 0 C 0
|
|
2080
|
+
s xenTro2.scaffold_19023 1291 195 + 3053 CCCAGACAAAATCCCATTTCACCCATACTTTTCTTACAAAGACCTCCTGGGATTTCTAATTATACTAACCTCACTAACTCTCCTAGCAATATTTGCCCCGAACCTTCTAGGTGACCCAGAAAACTTCACCCCAGCCAATCCACTTGTTACCCCTCCACACATCAAGCCAGAATGGTACTTCCTGTTTGCCTATGC
|
|
2081
|
+
i xenTro2.scaffold_19023 I 912 C 0
|
|
2082
|
+
s tetNig1.chrUn_random 103508301 195 + 171761319 CACAGATAAAATTCCATTCCACCCCTACTTCTCCTACAAAGACCTTATTGGATTCACTGTCCTCCTCACAACACTTACAATGCTCGCCCTCTTCTCTCCCAACTACCTAGGAGACCCAGACAACTTCACCCCTGCTAACCCCCTAGTCACCCCCGCCCACATCAAACCAGAGTGGTACTTCCTATTTGCATACGC
|
|
2083
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2084
|
+
s fr1.chrUn 320905630 195 + 349519338 CGCAGACAAAATCCCATTCCACCCATACTTCTCTTACAAAGACCTCCTGGGCTTCACAATCATGCTCTCAGCCCTCGCAACACTCGCCCTATTCTCTCCAAACTACCTCGGAGACCCTGACAACTTCACACCAGCCAACCCTCTAGTTACCCCCGCCCACATTAAACCAGAATGGTATTTCCTATTTGCATACGC
|
|
2085
|
+
i fr1.chrUn C 0 C 0
|
|
2086
|
+
s danRer4.chrM 15948 195 + 16596 CATGGATAAAATCCCCTTTCATCCTTATTTTTCAAATAAAGACCTCCTTGGTTTTGTAATTATATTATTTTCCCTCTCACTATTAGCACTATTCTCACCAAACCTCTTAGGAGATCCAGAAAATTTCACCCCTGCTAACCCTCTAGTAACACCTCCTCACATTAAACCAGAATGATATTTCCTATTCGCATACGC
|
|
2087
|
+
i danRer4.chrM C 0 C 0
|
|
2088
|
+
|
|
2089
|
+
a score=1644802.000000
|
|
2090
|
+
s mm8.chrM 14980 278 + 16299 CATTCTACGCTCAATCCCCAATAAACTAGGAGGTGTCCTAGCCTTAATCTTATCTATCCTAATTTTAGCCCTAATACCTTTCCTTCATACCTCAAAGCAACGAAGCCTAATATTCCGCCCAATCACACAAATTTTGTACTGAATCCTAGTAGCCAACCTACTTATCTTAACCTGAATTGGGGGCCAACCAGTAGAACACCCATTTATTATCATTGGCCAACTAGCCTCCATCTCATACTTCTCAATCATCTTAATTCTTATACCAATCTCAGGAATTA
|
|
2091
|
+
s rn4.chrM 14959 278 + 16300 TATTCTACGCTCCATTCCCAACAAACTAGGAGGGGTCGTAGCCCTAATCTTATCAATCCTAATCTTAGCCTTCCTACCATTCCTGCATACCTCAAAACAACGCAGCTTAACATTCCGCCCAATCACCCAAATCCTTTACTGAATCCTAGTAGCCAACCTCCTAGTCTTAACATGAATCGGAGGCCAACCAGTAGAACACCCATTTATCATTATTGGTCAACTAGCCTCCATCAGTTATTTTTCAATTATCCTCATTCTCATACCAATCTCTGGAATTG
|
|
2092
|
+
i rn4.chrM C 0 C 0
|
|
2093
|
+
s oryCun1.scaffold_140182 15146 278 + 20791 TATCCTACGCTCTATTCCAAATAAGCTCGGAGGAGTCCTAGCTCTAGTCCTATCCATCCTTGTTCTAGCCTTCATCCCATTCCTTCATATGTCTAAACAACGTAGCATGATATTCCGACCCATTAGTCAAGTCCTATTCTGAGTTCTCGTCGCAGATCTTCTCACACTCACATGAATCGGGGGCCAGCCAGTAGAACACCCATTCATCACCATTGGACAAGTAGCATCTGTCCTCTACTTCACCACCATCCTTATTCTTATACCCCTCGCAAGCCTAA
|
|
2094
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2095
|
+
s hg18.chrM 15583 278 + 16571 AATTCTCCGATCCGTCCCTAACAAACTAGGAGGCGTCCTTGCCCTATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCACTTTATTGACTCCTAGCCGCAGACCTCCTCATTCTAACCTGAATCGGAGGACAACCAGTAAGCTACCCTTTTACCATCATTGGACAAGTAGCATCCGTACTATACTTCACAACAATCCTAATCCTAATACCAACTATCTCCCTAA
|
|
2096
|
+
i hg18.chrM C 0 C 0
|
|
2097
|
+
s panTro2.chrM 15000 278 + 16554 AATCCTCCGATCCATCCCCAACAAACTAGGAGGCGTCCTCGCCCTACTACTATCTATCCTAATCCTAACAGCAATCCCTGTCCTCCACACATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAACTGCTTTACTGACTCCTAGCCACAGACCTCCTCATCCTAACCTGAATCGGAGGACAACCAGTAAGCTACCCCTTCATCACCATCGGACAAATAGCATCCGTATTATACTTCACAACAATCCTAATCCTAATACCAATCGCCTCTCTAA
|
|
2098
|
+
i panTro2.chrM C 0 C 0
|
|
2099
|
+
s rheMac2.chr3 59791440 276 + 196418989 AATCTTATGATCCATCCCCAATAAACTAGGAGGTGTACTGGCCCTTCTATTATCCATTCTCCTTCTAGCAGTTGTTCCTGCACTCCACACATCCAAACAACAAAGCATAATATTCCACCCATTAAGGCAATATCTGTTCTGAATCTTACTCACCAACCTATTCACCCTCATATGGATTGGAGGACAGCCAAGAA--CATCCTTTCATTACCATTGGACAGATGGCATCTATGATATGTTTCTCTATTATTCTTGTTCTCGTACCACTCACTGCCCTAA
|
|
2100
|
+
i rheMac2.chr3 N 0 C 0
|
|
2101
|
+
s bosTau2.chrM 15349 278 + 16338 AATCTTACGATCAATCCCCAACAAACTAGGAGGAGTACTAGCCCTAGCCTTCTCTATCCTAATTCTTGCTCTAATCCCCCTACTACACACCTCCAAACAACGAAGCATAATATTCCGACCACTCAGCCAATGCCTATTCTGAGCCCTAGTAGCAGACCTACTGACACTCACATGAATTGGAGGACAACCAGTCGAACACCCATATATCACCATCGGACAACTAGCATCTGTCCTATACTTTCTCCTCATCCTAGTGCTAATACCAACGGCCGGCACAA
|
|
2102
|
+
i bosTau2.chrM C 0 C 0
|
|
2103
|
+
s canFam2.chrM 15018 278 + 16727 TATCCTACGATCCATTCCTAATAAATTAGGAGGTGTACTCGCCCTAGTATTCTCCATCCTAATCTTGGCATTCATTCCACTCCTCCACACATCTAAGCAACGCAGCATAATATTCCGGCCCCTTAGCCAATGCCTATTCTGACTTTTAGTCGCCGATCTTCTCACTTTAACATGAATTGGAGGACAACCAGTTGAGCACCCTTTCATCATTATCGGACAAGTCGCTTCAATCTTATATTTCACCATCTTATTGATCCTAATACCAACAGTTAGCGTTA
|
|
2104
|
+
i canFam2.chrM C 0 C 0
|
|
2105
|
+
s dasNov1.scaffold_23239 1628 278 - 16977 AATCCTACGATCTATCCCAAATAAACTAGGAGGAGTATTAGCCCTAGTTTGCTCAATCCTTGTCCTCGCCATCATCCCTTTACTACACACAGCAAAACAACGAAGCCTTATATTCCGTCCAATCAGCCAATGTCTATTTTGACTCCTAGCAGCCAACCTAATAATCCTTACATGAATCGGAGGCCAACCAGTCGAACACCCATTCATTATCATCGGACAAGTAGCATCTATTTCATACTTCACAATTATCCTGGTCCTCATACCAATTGCAGGCCTAA
|
|
2106
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2107
|
+
s loxAfr1.scaffold_36650 1128 278 + 16266 CATCCTACGATCTGTACCAAACAAACTAGGAGGCGTCCTAGCCCTACTCCTATCAATTCTAATCCTAGGATTAATACCACTTCTCCATACATCCAAGCACCGAAGCATAATACTCCGACCTCTTAGCCAAGTCCTATTCTGAACTCTAACAATAGATTTACTAACACTTACATGAATTGGCAGCCAACCAGTAGAATATCCTTACATCATTATTGGTCAAATAGCCTCAATTCTATATTTCTCCATTATCCTAGCCTTCCTGCCAATTGCAGGAGTAA
|
|
2108
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2109
|
+
s echTel1.scaffold_181343 14375 278 + 18297 TATCCTTCGTTCTATCCCAAACAAACTAGGAGGAGTCTTAGCCCTCGTAACCTCCATTTTAATCCTTGCATTTATTCCTCTTCTTCATACAGCCAAACAACGAAGTCTTATATTCCGCCCGCTAAGCCAAATTCTATTCTGAATCCTGGCAGCTGACCTATTAGCCCTAACATGAATTGGAGGCCAACCCGTTGAAGACCCTTACATTATTATTGGCCAATTAGCTTCAATCACATATTTCACTATTATTCTAGTAATTATACCCTTATCAGGGGTAA
|
|
2110
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2111
|
+
s monDom4.chrUn 117166441 278 + 174229318 AATCTTACGATCAATTCCAAACAAATTAGGAGGAGTATTAGCTCTCTTAGCATCTATCTTAATCCTACTAATCATCCCACTGCTCCACACATCAAAACAACGAAGCCTAATATTCCGACCAATTTCACAAATCATATTCTGATCATTAGTAGCCAACCTTTTAACCCTTACATGAATTGGGGGACAACCAGTAGAACAACCTTTTATTATTATCGGTCAACTAGCCTCAATCCTATATTTTTCACTCATTATTATTTTTATACCATTAGCAGGTATGT
|
|
2112
|
+
i monDom4.chrUn C 0 C 0
|
|
2113
|
+
s galGal2.chrM 15731 278 + 16775 CATCCTACGCTCCATCCCCAACAAACTTGGAGGTGTACTAGCCCTAGCAGCCTCAGTCCTCATCCTCTTCCTAATCCCCTTCCTCCACAAATCTAAACAACGAACAATAACCTTCCGACCACTCTCCCAAACCCTATTCTGACTTCTAGTAGCCAACCTTCTTATCCTAACCTGAATCGGAAGCCAACCAGTAGAACACCCCTTCATCATCATTGGCCAAATAGCATCCCTCTCTTACTTCACCATCCTACTTATCCTCTTCCCCACAATCGGAACAC
|
|
2114
|
+
i galGal2.chrM C 0 C 0
|
|
2115
|
+
s xenTro2.scaffold_19023 1486 278 + 3053 CATCCTCCGATCGATCCCAAATAAATTAGGCGGAGTCCTAGCCCTAGTCTTCTCAATTCTGATTCTGGCTCTAATGCCCCTCCTGCATACCTCTAAACAACGAAGCCTTATATTCCGACCACTCACACAAATCACCTTCTGAGCCTTAGTAGCTGACACCCTAATCCTCACATGAATCGGAGGACAACCAGTAGAAGACCCTTATATCATGATCGGCCAACTAGCCTCAGTAATTTACTTCGCCATCTTCCTGGTCTTAATCCCCACCATTGGATGAG
|
|
2116
|
+
i xenTro2.scaffold_19023 C 0 n 0
|
|
2117
|
+
s tetNig1.chrUn_random 103508496 278 + 171761319 CATCCTACGGTCAATTCCAAACAAACTAGGAGGAGTCCTAGCCCTGCTTGCATCCATCCTCGTCCTCATAGTAGTCCCCCTCCTCCACACTTCAAAACAACGAAGCCTTACTTTCCGACCCTTTACACAATTTCTATTCTGAACCCTAATTGCCGATGTTGCCATCCTCACCTGAATCGGAGGCATACCTGTTGAACACCCTTACGTAATCATTGGCCAGGCTGCTTCAATCCTCTACTTCTCCTTATTTCTAGTCCTAATACCAGCAGCAGGATGGC
|
|
2118
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2119
|
+
s fr1.chrUn 320905825 278 + 349519338 AATTCTACGGTCTATCCCCAATAAACTAGGAGGAGTCCTGGCCCTTCTTGCCTCAATCTTAATTCTTATAGTAGTTCCTTTCTTACACACCTCTAAACAACGAAGCCTAACATTCCGCCCACTATCACAATTCCTATTCTGAACCCTAATTGCCGACGTCGTCATCCTAACCTGAATTGGAGGCATACCCGTCGAACATCCTTACATTATTATCGGACAAATTGCCTCAGTACTTTACTTCTCTCTCTTCCTAATCTTGATGCCAATAGCCGGTTGAC
|
|
2120
|
+
i fr1.chrUn C 0 C 0
|
|
2121
|
+
s danRer4.chrM 16143 278 + 16596 CATTCTACGATCTATCCCAAACAAACTAGGAGGTGTACTAGCTCTCTTATTTTCCATTTTAGTATTAATAGTAGTACCAATTTTACACACTTCTAAACAGCGAGGAATAGCATTCCGCCCAGTTACCCAATTTCTGTTCTGAACACTGGTAGCAGACATGCTTGTACTAACATGAATTGGAGGGATACCAGTAGAACACCCCTACATCATCATTGGACAAATAGCATCAATCTTATATTTTTCACTATTCTTAGTCTTATTCCCAATTACAGGGATTT
|
|
2122
|
+
i danRer4.chrM C 0 C 0
|
|
2123
|
+
|
|
2124
|
+
a score=405176.000000
|
|
2125
|
+
s mm8.chrM 15258 160 + 16299 TCGAAGACAAAATACTAAAATTATATC-----------CATGTCTTGATAGTATAAA-C--ATTACTCTGGTCTTGTAAACCTGAAATGAAGAT---CTTCTCTTCTCAAGAC-----------------------------AT-------CA-AGAAGAAGGAGCTA----CT---CCCCACCAC-CAGCACCCAAAG-CTGGTATTCT-AA-TTAAACTACTT
|
|
2126
|
+
s rn4.chrM 15237 162 + 16300 TTGAAGACAAAATGTTAAAATGAAATT-----------AATGTCCCGATAGTATAAA-A--ATTACTCTGGTCTTGTAAACCAAAAATGAAGAG---TCAGTCTTCTCAGGAC----------------------------AAT-------CA-AGAAGAAGGAACTAC---CT---CCCCACCAT-CAACACCCAAAG-CTGATATTCT-AC-TTAAACTACTT
|
|
2127
|
+
i rn4.chrM C 0 C 0
|
|
2128
|
+
s oryCun1.scaffold_140182 15424 153 + 20791 TCGAAAACAAAATCCTCAAATGA----------------AGGTCCCAGTAGTATAAA-C--ATTACTCTGGTCTTGTAAGCCAGGAATGGAGA----TAGTTCTCCCTGAGAC-----------------------------AT-------CA---GAGAAGAGGCTCC---TG---CCCCACCAT-CAGCACCCAAAG-CTGATATTCT-AC-TTAAACTACCC
|
|
2129
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2130
|
+
s hg18.chrM 15861 159 + 16571 TTGAAAACAAAATACTCAAATGGGC--------------CTGTCCTTGTAGTATAAA-CT-AATACACCAGTCTTGTAAACCGGAGACGAAAA-----CCTTTTTCCAAGGACA---------------------------AAT-------CAGAGAAAAAGTCTTTA-----A---CTCCACCAT-TAGCACCCAAAG-CTAAGATTCT-AATTTAAACTATTC
|
|
2131
|
+
i hg18.chrM C 0 C 0
|
|
2132
|
+
s panTro2.chrM 15278 159 + 16554 TCGAAAACAAAATACTTGAATGAAC--------------CTGCCCTTGTAGTATAAA-CT-AATACACCGGTCTTGTAAACCGGAAACGAAAA-----CTTTCTTCCAAGGACA---------------------------AAT-------CAGAGAAAAAGTAATTA-----A---CTTCACCAT-CAGCACCCAAAG-CTAAGATTCT-AATTTAAACTATTC
|
|
2133
|
+
i panTro2.chrM C 0 C 0
|
|
2134
|
+
s rheMac2.chr3 59791716 156 + 196418989 TCAAGGATAAACTACTTAAATGAAA--------------CTGCCCTTATAGTATAAT-CC-AATACGCCAGTCTTGTAAACCAGAAATGGAGA-------GTCCCCCAGGGA-A---------------------------ACT-------CAGAGAAAAAGCATTCC----TG---CTTCACCAT-CAACACCCAAAG-CTGAGATTCT-AA-TTAAACTATTC
|
|
2135
|
+
i rheMac2.chr3 C 0 C 0
|
|
2136
|
+
s bosTau2.chrM 15627 160 + 16338 TCGAAAACAAATTACTAAAATGAAGAC------------AGGTCTTTGTAGTACATC-T--AATATACTGGTCTTGTAAACCAGAGAAGGAGAACAACTAACCTCCCTAAGAC------------------------------T-------CA---AGGAAGAAACTGC---AG---TCTCACCAT-CAACCCCCAAAG-CTGAAGTTCT-AT-TTAAACTATTC
|
|
2137
|
+
i bosTau2.chrM C 0 C 0
|
|
2138
|
+
s canFam2.chrM 15296 157 + 16727 TCGAAAACAACCTTCTAAAATGAAGA---------------GTCTTTGTAGTATAAT-C--ATTACCTTGGTCTTGTAAACCAAAAATGGAGAGTAACCGCCCTCCCTAAGAC------------------------------T-------CA---AGGAAGAAGCTCT---TG---CTCCACCAT-CAGCACCCAAAG-CTGAGATTCT-TC-TTAAACTATTC
|
|
2139
|
+
i canFam2.chrM C 0 C 0
|
|
2140
|
+
s dasNov1.scaffold_23239 1906 164 - 16977 TCGAGAATAAGCTCATAAAATGAAG--------------ACGTCCCAGTAGTATAAA-T--ATTACCATGGTCTTGTAAACCATAAATGAAGAATAACCA--CTTCCTAGGACA---------------------------ATT-------CA-AGGAGAGGATACTACACTAA---CCCCACCAT-CAACTCCCAAAG-CTGACATTCT-AA-TTAAACTACTC
|
|
2141
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2142
|
+
s loxAfr1.scaffold_36650 1406 153 + 16266 TCGAAAACTACCTCATTAAGT-------------------AACCCCTATAGTATAAGAT--ATTACAATGGTCTTGTAAGCCATAAATGAAAG-----CCATTTTCTAAGGGTA----------------------------TT-------CAGGGAAGAGGTCCACT----TA---CCTCGCTAT-CAATACCCAAAA-CTGAAATTCT-TC-TTAAACTATTC
|
|
2143
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2144
|
+
s echTel1.scaffold_181343 14653 184 + 18297 TTGAAAATAACCTTCTTAAATGAAGACT--------ACTAAGCTTATGTAGTATAAT-T--ATTACCATGGTCTTGTAAACCATAGATGAAAG-----CTCCCTTCCATAAGCACAAA-------------CAAAAAAAAATCC-------CAGCGGAAAACGACACT----CAGTCCCTACCCATCCAGCACCCAAAAGCTGATATTCTAGT-TTAAACTACCC
|
|
2145
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2146
|
+
s monDom4.chrUn 117166719 176 + 174229318 ATGAAGACCATTTACTTGAACCAAAATTCCCATAGAACAAAGTCCAAGTAATTTAAT-A--AAAATACTGGCCTTGTAAGCCAGCAATGAAGG-AAATATACCTTCCTTAGACAT--------------------------CCT-------CA-AGAAGAAGGACTAA----CA---CCCTACCAT-CAACACCCAAAG-CTGATATTCT-AT-TTAAACTACTT
|
|
2147
|
+
i monDom4.chrUn C 0 C 0
|
|
2148
|
+
s galGal2.chrM 16009 164 + 16775 TAGAAAACAAAATACTCAACTACTAAA------------ATACTCTAATAGTTTATG-A--AAAACATTGGTCTTGTAAACCAAAAACTGAAG-ACTCCACCCTTCTTAGAGTA-----------------------------T-------CAGAAAAGGAGGGCTCAA---AC---CTCCATCTC-CAGCTCCCAAAG-CTGGTATTTTCAA-ATAAACTACTC
|
|
2149
|
+
i galGal2.chrM C 0 C 0
|
|
2150
|
+
s xenTro2.scaffold_18302 1606 190 + 2726 TAGAAAACAAACTCCTCAACTGA----------------TAGTCCTGATAGCTTAAC-TT-AAAGCATCGGTCTTGTAAGCCGAAGACTGGAGGCTAACGCCCTCCTCAAGACTTTCATTTTTGGCAGTTGCCAGCCCNCAATT-------CGAGGAAGAAGGAATCAA---AC---CTCCACTAT-TGACCCCCAAAG-CCAACATTCT-AT-TTAAATTACCC
|
|
2151
|
+
i xenTro2.scaffold_18302 M 685 C 0
|
|
2152
|
+
s tetNig1.chrUn_random 103508774 164 + 171761319 TAGAAAACAAAACACTTCAATAACC--------------AAGCATTAGTAGCTCAGC-GTTAGAGCGCCGGTCTTGTAAACCGGACGCCGGAGGTTAGAGTCCTCCCTACTGC------------------------------T-------CAAAAAGGAAGGATTCTA---AC---CTCCACCGC-TGGCTCCCAAAG-CCAACATTCTCAG-TTAAACTACTT
|
|
2153
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2154
|
+
s fr1.chrUn 320906103 163 + 349519338 TAGAAAACAAAATACTAAACTAA-C--------------AAGCATTAGTAGCTCAGA-TTCAGAGCGTCGGTCTTGTAAACCGAATGTCGGGGGTTAAAGTCCCCCCTTATGC------------------------------T-------CAAAAAGAAGGGACTTCA---AC---CCCCACCAC-TGGCTCCCAAAG-CCAGCATTCTTAA-TTAAACTACTT
|
|
2155
|
+
i fr1.chrUn C 0 C 0
|
|
2156
|
+
s danRer4.chrM 16421 171 + 16596 TAGAGAATAAGGCACTCCAATGAAG--------------CTGCCCTAGTAGCTTAGT-TTTAAAGCATCGGTCTTGTAATCCGAAGATCGGAGGTTAGACCCCTCCCTAGCGC------------------------------TAAATTACCAGAAAAGAGAGATTTTA---AC---TCACACCCC-TGACTCCCAAAG-CCAGGATTCTAAA-TTAAACTATTT
|
|
2157
|
+
i danRer4.chrM C 0 N 0
|
|
2158
|
+
|
|
2159
|
+
a score=-119632.000000
|
|
2160
|
+
s mm8.chrM 15418 5 + 16299 CT---------------------------------------------------------TG-----------------------------------A
|
|
2161
|
+
s rn4.chrM 15399 7 + 16300 CT---------------------------------------------------------TG---------------------------------TCA
|
|
2162
|
+
i rn4.chrM C 0 C 0
|
|
2163
|
+
s oryCun1.scaffold_140182 15577 39 + 20791 TC---------------------------------------------------------TGCTCTTTTACTTTAATAAAA-CTCAAGTACTTCATCA
|
|
2164
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2165
|
+
s hg18.chrM 16020 40 + 16571 TC---------------------------------------------------------TGTTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAA
|
|
2166
|
+
i hg18.chrM C 0 C 0
|
|
2167
|
+
s panTro2.chrM 15437 40 + 16554 TC---------------------------------------------------------TGTTCTTTCATGGGGAAGCAAATTTAGGTACCACCTAA
|
|
2168
|
+
i panTro2.chrM C 0 C 0
|
|
2169
|
+
s rheMac2.chr3 59791872 39 + 196418989 TC---------------------------------------------------------TGTATTCTTTTCGACATGCAT-TTTAACTACTATGTAA
|
|
2170
|
+
i rheMac2.chr3 C 0 C 0
|
|
2171
|
+
s bosTau2.chrM 15787 5 + 16338 CC---------------------------------------------------------TGA-----------------------------------
|
|
2172
|
+
i bosTau2.chrM C 0 I 173
|
|
2173
|
+
s canFam2.chrM 15453 5 + 16727 CC---------------------------------------------------------TGA-----------------------------------
|
|
2174
|
+
i canFam2.chrM C 0 I 1
|
|
2175
|
+
s dasNov1.scaffold_23239 2070 5 - 16977 CT---------------------------------------------------------TGA-----------------------------------
|
|
2176
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2177
|
+
s loxAfr1.scaffold_36650 1559 61 + 16266 CCTGCAGGCAATCAACCCGCTATGTATATCGTGCATTAAATGCTTGTCCCCATACATAATG------------------------------------
|
|
2178
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2179
|
+
s echTel1.scaffold_181343 14837 5 + 18297 CCC--------------------------------------------------------TG------------------------------------
|
|
2180
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2181
|
+
s monDom4.chrUn 117166895 5 + 174229318 CT---------------------------------------------------------TGA-----------------------------------
|
|
2182
|
+
i monDom4.chrUn C 0 C 0
|
|
2183
|
+
s galGal2.chrM 16173 5 + 16775 TC---------------------------------------------------------TGA-----------------------------------
|
|
2184
|
+
i galGal2.chrM C 0 N 0
|
|
2185
|
+
s xenTro2.scaffold_18302 1796 5 + 2726 CT---------------------------------------------------------CGA-----------------------------------
|
|
2186
|
+
i xenTro2.scaffold_18302 C 0 C 0
|
|
2187
|
+
s tetNig1.chrUn_random 103508938 4 + 171761319 CT---------------------------------------------------------TG------------------------------------
|
|
2188
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2189
|
+
s fr1.chrUn 320906266 4 + 349519338 TT---------------------------------------------------------TG------------------------------------
|
|
2190
|
+
i fr1.chrUn C 0 C 0
|
|
2191
|
+
s danRer4.chr11 47797944 4 + 52342180 TC---------------------------------------------------------TG------------------------------------
|
|
2192
|
+
i danRer4.chr11 N 0 C 0
|
|
2193
|
+
|
|
2194
|
+
a score=-468235.000000
|
|
2195
|
+
s mm8.chrM 15423 89 + 16299 GTAC--ATAAATT------------------------------------------------------T---------ACATAGT---------------ACAAC-A--------------GTACA------------------------------TTTAT----------G-------------------------------TAT-----AT-C------------------GTACAT-----TAAACTATTTTCCCCAA-GCAT---ATAAGCT-AGTACATTAA-------ATC
|
|
2196
|
+
s rn4.chrM 15406 88 + 16300 GTAC--ATAAAAT------------------------------------------------------G---------ATATGG----------------ACATT-A--------------AAACA------------------------------TTTAT----------G-------------------------------TAT-----AT-C------------------GTACAT-----TAAATTATTTTCCCCAA-GCAT---ATAAGCA-TGTAATATAT-------ATC
|
|
2197
|
+
i rn4.chrM C 0 I 1
|
|
2198
|
+
s oryCun1.scaffold_140182 15616 159 + 20791 GTACTGACAAATTACTAACACACTATGTAATTCGTGCATTAATGCTCGTCCCCATTAA---------A---------ATGTATT---------------ACAAC-A--------------ATAAA------------------------------TTCAT----------AACCAACATTCA--------------ACATATTATGCTTAAT-C------------------GTACAT-----AAATTCCTCATCCCCAT-GAATA--ATAAGCT-AGTACATTAC-------TGC
|
|
2199
|
+
i oryCun1.scaffold_140182 C 0 I 9
|
|
2200
|
+
s hg18.chrM 16060 82 + 16571 GTAT--------T------------------------------------------------------G---------ACTCAC----------------CCATCAA--------------CAACC------------------------------GCTAT----------G-------------------------------TAT-----TT-C------------------GTACAT-----T-ACTGCCAGCCACCAT-GAAT---ATTGTAC-GGTACCATAA-------ATA
|
|
2201
|
+
i hg18.chrM C 0 I 102
|
|
2202
|
+
s panTro2.chrM 15477 80 + 16554 GTAC--------T------------------------------------------------------G---------GCTCAT----------------TCATT-A--------------CAACC------------------------------GCTAT----------G-------------------------------TAT-----TT-C------------------GTACAT-----T-ACTGCCAGCCACCAT-GAAT---ATCGTAC-AGTACCAT-A-------TCA
|
|
2203
|
+
i panTro2.chrM C 0 I 189
|
|
2204
|
+
s rheMac2.chr3 59791911 86 + 196418989 GTAC--------T------------------------------------------------------GACCATCAGCACTGAT----------------ACATT-A--------------ATACT------------------------------TTTAT----------G-------------------------------TAC-----TT-C------------------ATGCAT-----T-ACTGCTAGTCCCCAT-GAAT---AATATAT-AGTACTATC-----------
|
|
2205
|
+
i rheMac2.chr3 C 0 I 26
|
|
2206
|
+
s bosTau2.chrM 15965 87 + 16338 -----------------------------------------------------------------------------GTACATA---------------ACATT-A--------------ATGTA------------------------------ATAAA----------G------ACATA--------------ATATG-TAT-----AT-A------------------GTACAT-----TAAATTATATGCCCCAT-GCAT---ATAAGCA-AGTACATGAC-------CTC
|
|
2207
|
+
i bosTau2.chrM I 173 C 0
|
|
2208
|
+
s canFam2.chrM 15459 104 + 16727 ------------------------------------------------------------------------------ACCCCT---------------ACATT-C--------------ATATA------------------------------TTGAA----------T---CACCCCTA--------------CTGTGCTAT-----GTCA------------------GTATCTCCAGGTAAACCCTTCTCCCCTC-CCCT---ATGTACGTCGTGCATTAATGGTTTGCCC
|
|
2209
|
+
i canFam2.chrM I 1 C 0
|
|
2210
|
+
s dasNov1.scaffold_23239 2075 111 - 16977 --------ACACT------------------------------------------------------A---------ACATGC----------------ACAAT-ATAT-----------ATATA------------------------------TATAT----------ATACCAAACATAGCGCTATTTCGGCGCTATG-TAA-----TT-C------------------GTGCAT-----ACATTTATCTACCCCAT-ACAT---ATCATTA-TATACTAAC-----------
|
|
2211
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2212
|
+
s loxAfr1.scaffold_36650 1620 99 + 16266 -----------------------------------------------------------------------------ATATATATTACTAACTATACTTAATCT-T--------------ACATAGA------------------------CCATACTAT----------G-------------------------------TAT----AAT-C------------------GTGCAT-----CACATTATTTACCCCAT-GCTT---ATAAGCA-AGTACTGTTT-------AAC
|
|
2213
|
+
i loxAfr1.scaffold_36650 C 0 I 1
|
|
2214
|
+
s echTel1.scaffold_181343 14842 64 + 18297 -----------------------------------------------------------------------------ATGTACA---------------AATTT-T--------------CAATA---------------------------------AT----------G-------------------------------TAT----TAT-C------------------GTGCAT-----ATATGTCTTTCCCCCAT----------------AGTACATTTT-------ATG
|
|
2215
|
+
i echTel1.scaffold_181343 C 0 I 1
|
|
2216
|
+
s monDom4.chrUn 117166900 138 + 174229318 -------------------------------------AAAAACAAAAAAAAACAAAAAAACGCGATTT---------GTATGCT---------------ATGTC-A--------------GTATTGaattttttaatattttaagatttttttgttttat----------g-------------------------------tat-----at-a------------------ttaCAT-----GGATTTATTTACCCCTA-GCAT---ATATCTA-TGTACAAGCT-------ACT
|
|
2217
|
+
i monDom4.chrUn C 0 I 5
|
|
2218
|
+
s xenTro2.scaffold_18302 1801 83 + 2726 ------------------------------------------------------------AGCAAAGG---------ATATGCT---------------CTATA-T--------------ACATA-------------------------------CTAT----------G-------------------------------CTT-----AT-A------------------GAGCAT-----TAATTTTTTAACCCCAC-GAATAATATTTATA-GCTAAAATG-----------
|
|
2219
|
+
i xenTro2.scaffold_18302 C 0 C 0
|
|
2220
|
+
s tetNig1.chrUn_random 103508942 51 + 171761319 ------------------------------------------------------------------------------------------------------------------------TTGCA------------------------------TATAT----------G-------------------------------TAA-----TA-T------------------CACCAT-----GCATATATATTAACCATATAAT---AGGATG----------------------
|
|
2221
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2222
|
+
s fr1.chrUn 320906270 53 + 349519338 ---------------------------------------------------------------------------------------------------------------------ATAATACA------------------------------TATAT----------G-------------------------------TAT-----TA-T------------------CCCCAT-----TCATATATATTAAACAT-TAAT---ATAATG----------------------
|
|
2223
|
+
i fr1.chrUn C 0 C 0
|
|
2224
|
+
s danRer4.chr11 47797948 91 + 52342180 -----------------------------------------------------------------------------------------------------------ACGGCCGGCGACAATTTA------------------------------TATGTCAATGTTTTAG-------------------------------TAA-----TT-TACAATTAAGACAGACATGCACTGT-----ATTGATACATTAATCAT-ACAT---AAAATG----------------------
|
|
2225
|
+
i danRer4.chr11 C 0 C 0
|
|
2226
|
+
|
|
2227
|
+
a score=-705633.000000
|
|
2228
|
+
s mm8.chrM 15512 107 + 16299 AATGGTTC--AGGT--------------------------CATAAAA-----T----AATCA----TCAAC-A-TAAATC-AATATA-----TA---------TACCATGAATATTATCTTA-----------------------AACACATTA----------------AACTA------------------------------AT------------GTTA----------TAAGGACA-TATCTGTGTTATCTG
|
|
2229
|
+
s rn4.chrM 15495 103 + 16300 AATGATTT--AGGA--------------------------CATACAT-----T----TAAAC----TCAACTA-TAAATT-CACA--------A---------CAACATGTCTAT--TCTCA-----------------------AATACATTA----------------AGATA------------------------------AT------------GCTT----------ATTAGACA-TATCTGTGTTATTAG
|
|
2230
|
+
i rn4.chrM I 1 C 0
|
|
2231
|
+
s oryCun1.scaffold_140182 15784 113 + 20791 CATAATCC--ACTT--------------------------AATACAT-----C----ACACATAATTCAACAA-AAAATC-GACC--------C---------AAACATGAATAT--TCTCA--------------------------CCAAAA----------------ATCTA------------------------------AT------------GATTGACT--TGACATTGGACATTAATTCCATAATTAA
|
|
2232
|
+
i oryCun1.scaffold_140182 I 9 C 0
|
|
2233
|
+
s hg18.chrM 16244 87 + 16571 TGCAACTCCAAAGC--------------------------CACCCCT-----C----ACCCA----CTAGG-A------------------------------TACCAACAAACC--TACCC-----------------------------------------------------------------------------------AC------------CCTTAACA--GTACATAGTACA-TAAAGTCATTTACCG
|
|
2234
|
+
i hg18.chrM I 102 I 1
|
|
2235
|
+
s panTro2.chr2a 84667382 123 + 114460064 AGTGATTTCTTAAT--------------------------CAACTAT-----C----ACACA----TCATC-A--TTATT-GGTT--------G---------TACAATAAGACC--TGCCC-CACA------------------TGAATATTG-----------------ACCAGTACTGT---------------------AAAT------------CCTTACTC--TTACATAGTACA-TATGTTCATTCATCT
|
|
2236
|
+
i panTro2.chr2a n 189 I 313
|
|
2237
|
+
s rheMac2.chr3 59792023 167 + 196418989 AGAGATTTTATGACATTA----TAAGCTT----------GCTCCACA-----T----GCATA----TAAGC-A-ATTATT-AGCA--------ATTTCTTAACTATCATATATAA--TACTA-TACT------------------TACATATAG----------------AACTAGTTCCATATGAATATCGACCAGTACTCAAAGT------------TCTTAATA--TTACATAGTACA-ATCATTTGTTCATTG
|
|
2238
|
+
i rheMac2.chr3 I 26 I 1
|
|
2239
|
+
s bosTau2.chrM 16052 77 + 16338 --------------------------TAT-----A-GCAGTACATAA-----T----ACATA----TAATT-A-TTGACTGTACA------------------TAGTAC--ATTA--TGTCA------------------------------------------------AATTC------------------------------AT------------TCTTGATA--GTATATCTA-------------------
|
|
2240
|
+
i bosTau2.chrM C 0 C 0
|
|
2241
|
+
s canFam2.chrM 15563 90 + 16727 --------------------------CAT----------GCATATAAGCATGT----ACATA----ATATT-A-TATCCT-TACA------------------TAGGACATATTA--ACTCA------------------------------------------------ATCTC------------------------------ATAATTCACTGATCTTTCAACA--GTA-ATCGA-------------------
|
|
2242
|
+
i canFam2.chrM C 0 C 0
|
|
2243
|
+
s dasNov1.scaffold_23239 2186 119 - 16977 ----------------TATTATTAATCTT-----ACATAGTACATTC-----T----ATGTA----TAATC-A-CACATA-CACTTA---TCTA---------CCCCATACATAT--CATTA-------------------------TATACTA----------------ACT--------------------------------AT------------TATTAATC--TTACATAGTACATTCTATGTATAATCAC
|
|
2244
|
+
i dasNov1.scaffold_23239 C 0 I 54
|
|
2245
|
+
s loxAfr1.scaffold_36650 1720 106 + 16266 ----------------------------------------AATGTGT-----C-AAGTCATA----TTCAT-G-TAGATT-CACA------------------GGTCATGTTCTG--GTTCA-----------------------TGGATATTATTT--------ACCTACGATA------------------------------AA------------CCATAGTC--TTACATAGCACATTAAAGCTCTTGG---
|
|
2246
|
+
i loxAfr1.scaffold_36650 I 1 I 4
|
|
2247
|
+
s echTel1.scaffold_181343 14907 82 + 18297 ----------------------------------------AATCCCC-----C----CCTTT----TAAAT-T-TATTTC-CCCC------------------ATTCATATCTTG-------------------------------TAATATTACT--------------CAGTC------------------------------AA------------TGATACTCAATTAAATAA-----------TCTTAA---
|
|
2248
|
+
i echTel1.scaffold_181343 I 1 I 4
|
|
2249
|
+
s monDom4.chrUn 117167043 102 + 174229318 --------------------------------------ATTACTAAA-----T----ACATA----AAATT-A-TTAATC-------------G---------TACAATGATTTG--TACAG-TATA------------------CGGATATTCTTA--------ACCTAATATA------------------------------TA------------TCATAATC--TTACATAAGACA-------TATTATGAA
|
|
2250
|
+
i monDom4.chrUn I 5 I 5
|
|
2251
|
+
s xenTro2.scaffold_18302 1884 111 + 2726 -----------------------AAATATCTAACATAGAGGATATGC-----T----CTATA----TACAT-ACTATGCT-TATA------------------GAGCATTAATTT--TTTAACCCCA------------------CGAATAATATTT--------AT---AGCTA------------------------------AA------------ATGAAATATCTAACATAGAGG-----------------
|
|
2252
|
+
i xenTro2.scaffold_18302 C 0 N 0
|
|
2253
|
+
s tetNig1.chrUn_random 103508993 119 + 171761319 ------------------------------------------TATAG-----T----ACATA----ATTAG-A-T-TAAT-CACTTAAAACTGG---------GGTTATACATAA--AGCAAGGATAACAAGTGAAAAAGGACATAAAACATAACTGGAACAG--ACAGAAATTT------------------------------ATAGAGAA------GCATGACA------------------------------
|
|
2254
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2255
|
+
s fr1.chrUn 320906323 125 + 349519338 ------------------------------------------CATAA-----CTAAGACATA----GTACT-A-TATATT-CACCTATAATTCC---------TATAACCCATAA--AGCAAGTACAGAAAACTAAAAATGCTA-AAAGCATGACTAGAAAAATCCCTAAAAATT------------------------------GTTGAAGA------ACTGAACG------------------------------
|
|
2256
|
+
i fr1.chrUn C 0 C 0
|
|
2257
|
+
s danRer4.chr11 47798039 71 + 52342180 ------------------------------------------CATGC-----T-----CTAA----TTTTT-A-CATATG-CATGT--------------------------------GCAAGCATA------------------TACATATGTGTGGAT-----ACACACGTAT------------------------------GT------------GCTTTGTC------------------------------
|
|
2258
|
+
i danRer4.chr11 C 0 C 0
|
|
2259
|
+
|
|
2260
|
+
a score=25648.000000
|
|
2261
|
+
s mm8.chrM 15619 194 + 16299 ACATA-CACCATACA-GT-------CATAAACTCTT-----CTCTTCCATAT-----GACTATC----CC--CTT--CCCCA--------------------------------------------TTTG---------G-----TC---------------TATTAATCT-ACCATCC--------------------TCCGTGAA---ACCAACAACCC--GCCCA--CCAATG---CCCCTCTTCTCGCT----CCGGGCCCATTA-AACTTGGGGGTAGCT-AA-ACTGAAACTTTATCAGACATCTGGTTCTTACTTCAGGGCCAT---C
|
|
2262
|
+
s rn4.chrM 15598 194 + 16300 ACATG-CACCATTAA-GT-------CATAAACCTTT-----CTCTTCCATAT-----GACTATC----CC--TGT--CCCCA--------------------------------------------ATTG---------G-----TC---------------TCTATTTCT-ACCATCC--------------------TCCGTGAA---ATCAACAACCC--GCCCA--CTCGTC---CCCCTCTTCTCGCT----CCGGGCCCATTC-GTCCTGGGGGTGACT-AT-ACTGAAACTTTACCAGGCATCTGGTTCTTACTTCAGGGCCAT---C
|
|
2263
|
+
i rn4.chrM C 0 C 0
|
|
2264
|
+
s oryCun1.scaffold_140182 15897 202 + 20791 ACATA-GACCATCAA-ATCT----ACACACACCACTCAACCCTTACCCATAC-----GACTATC----CC--TCT--CCCCC--------------------------------------------AGTC---------C-----TC---------------TCACAACTT-ACCATCC--------------------TCCGTGAA---ACCAACAACCC--GCCCA--CCAAGG--ATCCCTCTTCTCGCT----CCGGGCCCATAA-AACTTGGGGGTTTCT-AA-TATGAAACTATAACTGGCATCTGGTTCTTACCTCAGGGCCAT----
|
|
2265
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2266
|
+
s hg18.chrM 16332 192 + 16571 ACATAGCACATTACA-GT-------CA-AATCCCTT-----CTCGTCCCCAT-----GGATGAC----CC--CCC--TCAGAT-------------------------------------------AGGG---------G-----TC---------------CCTTGACC--ACCATCC--------------------TCCGTGAA---ATCAATATCCC--GCACA--AGAGTG---CTACTCTCCTCGCT----CCGGGCCCATAA-CACTTGGGGGTAGCT-A--AAGTGAACTGTATCCGACATCTGGTTCCTACTTCAGGGCCAT----
|
|
2267
|
+
i hg18.chrM I 1 C 0
|
|
2268
|
+
s panTro2.chrM 15746 190 + 16554 ACATAGCACATTACA-GT-------CA-AACCCCTC-----CTCGCCCCCAC-----GGATGCT----CC--CCC--TCAGAT-------------------------------------------AGGA---------A-----TC---------------CCTTGGTC--ACCATCC--------------------TCCGTGAA---ATCAATATCCC--GCACA--AGAGTG-----ACTCTCCTCGCT----CCGGGCCCATAA-CATCTGGGGGTAGCT-A--AAGTGAACTGTATCCGACATCTGGTTCCTACCTCAGGGCCAT----
|
|
2269
|
+
i panTro2.chrM I 189 C 0
|
|
2270
|
+
s rheMac2.chr3 59792191 193 + 196418989 ACATAGCACATTTCA-GT-------CA-AAACCACC-----CTTGCCAGCAT-----GGATATC----TC--CTA--CCAAAT-------------------------------------------TTTG---------G-----TC---------------TCTTAGTCT-ACCAACC--------------------TCTGAGAA---ATCATCATCCC--ACTTG--GGCATG---TAACCCTCCTCACT----CCAGGCCCGTAA-TACTTGGAGGTGACT-AT-ACTTCAACTGTACCTGGCATTTGGTTCTTACCTC-GGGTCAT----
|
|
2271
|
+
i rheMac2.chr3 I 1 C 0
|
|
2272
|
+
s dasNov1.scaffold_23239 2359 263 - 16977 ACATAGCACATTCTATGTATAATCACACATACATTT-----ATCTACCCCAT-----GCATATC----AC--ACC--CCAACTAAACCTACGCACAGACATAACGAGTACCAAGTTCTAACCGTACACTG---------A-----TCATCTCCAACCAAAATTCTCACTC--ACCAACT--------------------CCCGAGAA---ACCAGCAACCC--GCCAG--ACAAGT--ATCCCTCTGCTTGCT----CTGAGCCCATAA-ACCGTGGGGGTTTCT-ATACGTGAAACTTTATCTGGCATCTGGTTCTTTCTTCAGGGCCAT---C
|
|
2273
|
+
i dasNov1.scaffold_23239 I 54 C 0
|
|
2274
|
+
s loxAfr1.scaffold_36650 1830 191 + 16266 ACATAGCACATCACT-GA-------GA----AATCT-----CTAGTCACCAT-----GCATATC----AC--CTC--CAAT---------------------------------------------GGTT---------G-----TA---------------CCTTAACT--ACCTACC--------------------TCCGAGAA---ACCATCAACCC--GCCCATCTTCGTG---TCCCTCTTCTCGCT----CCGGGCCCATCA-ATTGTGGGGGTTTCT-AT-ACTGGATCTATACCTGGCATCTGGTTCTTTCTTCAGGACCAT---C
|
|
2275
|
+
i loxAfr1.scaffold_36650 I 4 C 0
|
|
2276
|
+
s echTel1.scaffold_181343 14993 190 + 18297 ACATAGCACATCTCT-GT-------CT----CCGTC-----CTTGTCAAATG-----GCGTATC----AC--CTC--CAAA---------------------------------------------TATC---------T-----TT---------------CATTAATC--ACCAAGC--------------------TTCGAGAA---ACCAACAACCC--GCTCGG-GTAATG---CCCCTCTTCTCGCT----CCGGGCCCATTA-ATCGTGGGGGTTTCTAAT-AATGAATTT-TATCAGACATCTGGTTCTTTCTTCAGGACCAT---C
|
|
2277
|
+
i echTel1.scaffold_181343 I 4 C 0
|
|
2278
|
+
s monDom4.chrUn 117167150 206 + 174229318 GCATA-GACATTGTATGCATGGTTCCACAGACTAAC-----TAACCTACCATTTCTAGCATATC----AT--CAC--CAAC---------------------------------------------GATA---------G-----TA---------------CCTCAGTC--CTCCCCT--------------------CACGAGAA---ACCACCATCCC--GCCAT--CTGAAGGTAAAACGTCCTTCAGA----GGAGATGCATGT-ATTGTGTCGG-ACCT-A--AGTTCCTTTCTAATGGGCCACTGGTTGCTACTTCAGGGTCAT---A
|
|
2279
|
+
i monDom4.chrUn I 5 C 0
|
|
2280
|
+
s canFam2.chrM 15653 161 + 16727 --------------------------------------------------AT-----GCATATC----AC--TTAGTCC-----------------------------------------------AATA---------A-----GG---------------GCTTAATC--ACCATGC--------------------CTCGAGAA---ACCATCAACCCTTGCTCG--TAATG----TCCCTCTTCTCGCT----CCGGGCCCATACTAACGTGGGGGTTACT-AT-CATGAAACTATACCTGGCATCTGGTTCTTACTTCAGGGCCATAACC
|
|
2281
|
+
i canFam2.chrM C 0 C 0
|
|
2282
|
+
s bosTau2.chrM 16129 161 + 16338 --------------------------------------------------TT-----ATATATT----CC--TTA--CC-----------------------------------------------ATTA---------GATCACGA---------------GCTTAATT--ACCATGC--------------------CGCGTGAA---ACCAGCAACCC--GCTAG--GCAGGG--ATCCCTCTTCTCGCT----CCGGGCCCATAA-ACCGTGGGGGTCGCT-ATCCAATGAATTTTACCAGGCATCTGGTTCTTTCTTCAGGGCCAT---C
|
|
2283
|
+
i bosTau2.chrM C 0 C 0
|
|
2284
|
+
s tetNig1.chrUn_random 103509112 201 + 171761319 GTATT-CAAGACCTA-AC-------ACTAAATC--------CATCAGTCAAG-----ATATACCAAGTAC--CCA--GCATCC-------------------------------------------CGTT---------A-----AA---------------ATCCAAAT--CCGATGT--------------------AGTAAGAACCGACCATCAGTTG--ATTTC--TTAATG--CATACTCTTATTGATAG--TGAGGGACAATC-GTTCTGAGGGTCGCA-CT-TCTTGAATTATTCCTGGCATTTGGTTCCTACTTCAGGGCCAT---G
|
|
2285
|
+
i tetNig1.chrUn_random C 0 C 0
|
|
2286
|
+
s fr1.chrUn 320906448 201 + 349519338 AAATT-TAAGACCGA-AC-------AATAAACT--------CATCAGTCAAG-----ATATACCAGG-AC--TCA--ACACCC-------------------------------------------CGTA---------A-----AA---------------TACCAACTA-TTAATGT--------------------AGTAAGAACCGACCATCAGTTG--ATTTC--TTAATG--CATATTATTATTGAAGG--TGAGGGACAATA-ACAGTGGGGGTTTCA-CT-AAATGAACTATTCCTGGCATTTGGTTCCTACTTCAGGGCCAT---T
|
|
2287
|
+
i fr1.chrUn C 0 C 0
|
|
2288
|
+
s danRer4.chr11 47798110 237 + 52342180 ACATG-TATGTACTG-GT-------TACATATTATG-----CATGTATTAGG-----ACATACTATGTATTATCA--CCATAT-------------------------------------------CATTATTTTAACCA-----TA---------------AAGCAGGTACATAATGTTTATATTATTCACCATATCAAGTGAGAGACCACCAATAATTT--A--TA--TAAATG--CATATCATGCATGATAGAATCAGGGACATCG-ATTTAAACGTTGTTA-AA-AAATGAACTATTCCTGGTATCTGGTTCAAATCTCACGTTCAT---C
|
|
2289
|
+
i danRer4.chr11 C 0 N 0
|
|
2290
|
+
|
|
2291
|
+
a score=70787.000000
|
|
2292
|
+
s mm8.chrM 15813 46 + 16299 AAATGCGTTATCG--CCCATACGTTCCCCTTAAATAAGACAT--CTCGAT
|
|
2293
|
+
s rn4.chrM 15792 46 + 16300 AATTGGTTCATCG--TCCATACGTTCCCCTTAAATAAGACAT--CTCGAT
|
|
2294
|
+
i rn4.chrM C 0 C 0
|
|
2295
|
+
s oryCun1.scaffold_140182 16099 46 + 20791 AAACCTAAGATCG--CCCACACGTTCCTCTTAAATAAGACAT--CTCGAT
|
|
2296
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2297
|
+
s hg18.chrM 16524 45 + 16571 AAAGCCTAAATAG--CCCACACGTTCCCCTTAAATAAGACAT--CACGA-
|
|
2298
|
+
i hg18.chrM C 0 N 0
|
|
2299
|
+
s panTro2.chrM 15936 47 + 16554 GAAGTTCAAAAGACTCCCACACGTTCCCCTTAAATAAGACAT--CACGA-
|
|
2300
|
+
i panTro2.chrM C 0 I 1
|
|
2301
|
+
s rheMac2.chr3 59792384 46 + 196418989 AAAACTAAGATTG--CCCACACGTTCGCCTTAAATAAGACAC--CTCGAT
|
|
2302
|
+
i rheMac2.chr3 C 0 C 0
|
|
2303
|
+
s dasNov1.scaffold_23239 2622 46 - 16977 TCACCTAAAACCG--TCCACTCATTCCCCTTAAATAAGACAT--CTCGAT
|
|
2304
|
+
i dasNov1.scaffold_23239 C 0 C 0
|
|
2305
|
+
s loxAfr1.scaffold_36650 2021 46 + 16266 TCACCTAAAATCG--CCCATTCTTTCCTCTTAAATAAGACAT--CTCGAT
|
|
2306
|
+
i loxAfr1.scaffold_36650 C 0 C 0
|
|
2307
|
+
s echTel1.scaffold_181343 15183 46 + 18297 TCACCTAAAATCG--CCCACTCTTTCCTCTTAAATAAGACAT--CACGAT
|
|
2308
|
+
i echTel1.scaffold_181343 C 0 C 0
|
|
2309
|
+
s monDom4.chrUn 117167356 43 + 174229318 ATACTGTTCATTG--CATCCAAACTGCTTTTTAA-GAGGCAT--TGCT--
|
|
2310
|
+
i monDom4.chrUn C 0 I 3
|
|
2311
|
+
s canFam2.chrM 15814 46 + 16727 TTATTTACTCCAA--TCCTACTAATTCTCGCAAATGGGACAT--CTCGAT
|
|
2312
|
+
i canFam2.chrM C 0 C 0
|
|
2313
|
+
s bosTau2.chrM 16290 46 + 16338 TCATCTAAAACGG--TCCATTCTTTCCTCTTAAATAAGACAT--CTCGAT
|
|
2314
|
+
i bosTau2.chrM C 0 N 0
|
|
2315
|
+
s tetNig1.chrUn_random 103509313 45 + 171761319 --ACTTGGATCAT--TCCTCACACTTTCATCGACGCTGACATAAGTTAT-
|
|
2316
|
+
i tetNig1.chrUn_random C 0 N 0
|
|
2317
|
+
s fr1.chrUn 320906649 46 + 349519338 --AATCGATTTAT--TCCTCATTCTTTCATCGACGCTGACATAAGTTGTT
|
|
2318
|
+
i fr1.chrUn C 0 C 0
|
|
2319
|
+
|
|
2320
|
+
a score=39116.000000
|
|
2321
|
+
s mm8.chrM 15859 70 + 16299 ----GGTATCGGGT-CT--AATC-AGCCCA-----TGACCA--ACATAACTGTG--GTGTCATG-CATTTGGTATCTTTTTATTTT--GG
|
|
2322
|
+
s rn4.chrM 15838 70 + 16300 ----GGTAACGGGT-CT--AATC-AGCCCA-----TGATCA--ACATAACTGTG--GTGATATA-CATTTGGTATTTTTTAATTTT--CG
|
|
2323
|
+
i rn4.chrM C 0 C 0
|
|
2324
|
+
s oryCun1.scaffold_140182 16145 71 + 20791 ----GGACTAATGA-CT--AATC-AGCCCA-----TGCTCAC-ACATAACTGTG--ATGTCATG-CATTTGGTATTTTTAATTTTT--TG
|
|
2325
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2326
|
+
s hg18.chr7 57270118 70 + 158821424 ----GGACTACCGA-CT---ATC-ACCCTA----TTAACCAG-TCACGGGAGCA--CTGTCACA-CATTTGGTATTTTTAACTTTT--G-
|
|
2327
|
+
i hg18.chr7 N 0 I 2
|
|
2328
|
+
s panTro2.chrM 15984 61 + 16554 ----GGATCACAGGTCT---ATC-ACCCTA----TTAACCAG-TCACGGGAGC---CTTCCATG-CATTTGGTATTTT------------
|
|
2329
|
+
i panTro2.chrM I 1 n 1
|
|
2330
|
+
s rheMac2.chr3 59792430 70 + 196418989 ----GGACGAGTGA-CT---CTC-ACCCTA----TTAACCAG-TCACAGGAGCA--CTGTCATG-CATTTGGTATTTTTAACTTTT--G-
|
|
2331
|
+
i rheMac2.chr3 C 0 N 0
|
|
2332
|
+
s canFam2.chrM 15860 69 + 16727 ----GGACTAATGA-CT--AATC-AGCCCA-----TGATCAC-ACATAACTGTG--GTGTCATG-CATCTGGTATCTTTTAATTTT----
|
|
2333
|
+
i canFam2.chrM C 0 N 0
|
|
2334
|
+
s dasNov1.scaffold_23239 2668 72 - 16977 ----GGACTTATGC-CA--TATT-AAACCG-----TGACCTT-GCATCCCCTTA-TCTGTCATA-CATTTGGTACCTTTTTTTTTG--GG
|
|
2335
|
+
i dasNov1.scaffold_23239 C 0 N 0
|
|
2336
|
+
s loxAfr1.scaffold_36650 2067 70 + 16266 ----GGATTAATGA-CT--AATC-AGCCCA-----TGATCATAACATAACTGTG--GTGTCATG-CATTTGGTATCTTTTTAATTT----
|
|
2337
|
+
i loxAfr1.scaffold_36650 C 0 N 0
|
|
2338
|
+
s echTel1.scaffold_181343 15229 74 + 18297 ----GGGTTAATGT-CT--AATCAAGCCCA-----TGCTCAC-ACATAACTGTG--GTGTCATG-CAGTTGGTATTTTTTTAATTTTTAG
|
|
2339
|
+
i echTel1.scaffold_181343 C 0 I 1
|
|
2340
|
+
s monDom4.chrUn 117167402 74 + 174229318 ----GTTTCGTTTA-CT--GTTT-GCCTCA-----TAATCGCGGCATCAGTTGAACTCAACAGG-CATGGGGTGGATTTTTTTTTG--GG
|
|
2341
|
+
i monDom4.chrUn I 3 N 0
|
|
2342
|
+
s fr1.chrUn 320906695 83 + 349519338 GGTGGAGTTCATCA-GTGAGATA-ATCCCACATGCCGAGCGT-TCTCTCCACGG--GGGTCAGGTTATTTTTTCTCTCTTTCCTTT--CA
|
|
2343
|
+
i fr1.chrUn C 0 C 0
|
|
2344
|
+
|
|
2345
|
+
a score=-32971.000000
|
|
2346
|
+
s mm8.chrM 15929 35 + 16299 C----CTACTT-------------------TCATCAACATAGCCGTC-AAGG--CATGAAA
|
|
2347
|
+
s rn4.chrM 15908 34 + 16300 G----ATGCCT-------------------TCCTCAACATAGCCGTC-AAGG--CATG-AA
|
|
2348
|
+
i rn4.chrM C 0 C 0
|
|
2349
|
+
s oryCun1.scaffold_140182 16216 40 + 20791 GG-TTATGCTT------------------GGACTCAACATGGCCGCG-GTGGGCCCTG-AC
|
|
2350
|
+
i oryCun1.scaffold_140182 C 0 C 0
|
|
2351
|
+
s hg18.chr7 57270190 31 + 158821424 ----GATGCTA------------------TCATTCACCATCACAG---AAGG--CCTG---
|
|
2352
|
+
i hg18.chr7 I 2 N 0
|
|
2353
|
+
s panTro2.chr2a 84667818 30 + 114460064 ----GA-GCTG------------------TGACTCAGCATGGGGG---AA-G--CCTGA--
|
|
2354
|
+
i panTro2.chr2a I 313 I 4
|
|
2355
|
+
s rheMac2.chrX 101422069 32 + 153947521 ----GATGATG------------------TGATCCAACATGGCTGTC-AAGG--CCT----
|
|
2356
|
+
i rheMac2.chrX N 0 C 0
|
|
2357
|
+
s echTel1.scaffold_181343 15304 35 + 18297 ----GATGCTG------------------TGATCCAACTAGGCCGTCTGAGG--CCTTA--
|
|
2358
|
+
i echTel1.scaffold_181343 I 1 I 4
|
|
2359
|
+
s fr1.chrUn 320906778 40 + 349519338 -ATTGACATTTCAGAGTGCAGCGCGTCAATGGTTCATCAAG--------------------
|
|
2360
|
+
i fr1.chrUn C 0 C 0
|
|
2361
|
+
|
|
2362
|
+
a score=-27643.000000
|
|
2363
|
+
s mm8.chrM 15964 108 + 16299 GGACAGCACAC-AGTCTAGAC--GCACC-TACGGTGAAGAATCATT-----AGTCCGCAAAACCCAATCA----------CCTAAGGCTA-ATTA----TTCATGCTTGTT-----AGACATAAATGCTACTCAATA
|
|
2364
|
+
s echTel1.scaffold_181343 15343 105 + 18297 AGTCAAGTCT--ATTGTAGCT--GGACT-TCAATTGAAATATCCTT-----AATCCACATAA--ACATGA----------ATGTTAATTATTTAA----TTAATGCTTGTT-----AGACATAAA-GAGAAATCATA
|
|
2365
|
+
i echTel1.scaffold_181343 I 4 N 0
|
|
2366
|
+
s rheMac2.chrX 101422101 94 + 153947521 TGACAAAACTTGACTGTAGCT--GAACT-TAAATTGAAT-GTTATT-----TTCCCAAGTAA--AAACCA----------TAAGGTGTTAATTAA----TCTATGCTCAAT-----GGACATAA-------------
|
|
2367
|
+
i rheMac2.chrX C 0 I 33
|
|
2368
|
+
s panTro2.chr2a 84667852 92 + 114460064 TGCCTAATCC--ATTGTAACT--GAACT-TACATTGAAT-ATTCCG-----GACTCACATAA--CAACCA----------TAAGGTTTTAATTAA----TTCATGCTTGAA-----GGACATAA-------------
|
|
2369
|
+
i panTro2.chr2a I 4 N 0
|
|
2370
|
+
s hg18.chrX 101950202 94 + 154913754 TGACAAAACTTGACTGTAGTT--GAACT-TAAATTGAAT-GTTATT-----TTCCCAAACAA--AAACGA----------TAAGGTGTTAATTAA----TCCATGCTCAAT-----GGGCATAA-------------
|
|
2371
|
+
i hg18.chrX N 0 N 0
|
|
2372
|
+
s oryCun1.scaffold_140182 16256 93 + 20791 CCGGGACACTT-ATTGTAGAC--GAGCA-CCTAATGAAG-ACCCTC-----CATCCTCATAATTATGAGC----------CGGGACATTCTTTTA-------ATGCTTGTC-----GGACATAAA------------
|
|
2373
|
+
i oryCun1.scaffold_140182 C 0 N 0
|
|
2374
|
+
s rn4.chrM 15942 110 + 16300 GGTCAGCACAA-AGTCCTGTG--GAACCTTTTAGTTAAGGGTCATT-----TATCCTCATAGACAAAGCT----------CGAAAGACTATTTTA----TTCATGTTTGTA-----AGACATAAATATTTATAAATA
|
|
2375
|
+
i rn4.chrM C 0 C 0
|
|
2376
|
+
s monDom4.chr4 336353929 99 + 430141050 -------------ATATAATCTAGGACC-TAACATAAAGTGCTGTTCTCAGAGTTCATGCAATTAAATGA------------GGATATTATATAA-------ATGATTTTA-----AGACATATTATATTATTAGAA
|
|
2377
|
+
i monDom4.chr4 N 0 C 0
|
|
2378
|
+
s fr1.chrUn 320906818 94 + 349519338 ------------------GTT--GAACA-TTT--------TTTCTT-----GGTTTACGGAA--ATGTTAATTAATGAATTAAGACATTATTTAAGAATTACATTATTGATATCAAGGACATAAATAATA-------
|
|
2379
|
+
i fr1.chrUn C 0 C 0
|
|
2380
|
+
|
|
2381
|
+
a score=-35064.000000
|
|
2382
|
+
s mm8.chrM 16072 38 + 16299 CCA---------AATTTTAACTC-------T-----CCAAACCCCCC-----------ACCCCCTCCTC--------T
|
|
2383
|
+
s rn4.chrM 16052 47 + 16300 CTG---------AA----AAATC-------TGTCAACAAACCCCCCC-----------ACCCCCTACACCTGAAACTT
|
|
2384
|
+
i rn4.chrM C 0 C 0
|
|
2385
|
+
s hg18.chr8 77619431 34 - 146274826 CCA---------AT---TAAATC-------T-----GCAAGCCCCC------------ATCTCTGACTT--------T
|
|
2386
|
+
i hg18.chr8 N 0 I 14
|
|
2387
|
+
s panTro2.chr8 79213306 34 - 145085868 CCA---------AT---TAAATC-------T-----GCAAGCCCCC------------ATCTCTGACTT--------T
|
|
2388
|
+
i panTro2.chr8 N 0 I 14
|
|
2389
|
+
s rheMac2.chrX 101422228 47 + 153947521 CCATCATACATGAT---TAACTC-------T-----GCAAACTCCCT--------CTGATCCCCTACTT--------T
|
|
2390
|
+
i rheMac2.chrX I 33 N 0
|
|
2391
|
+
s monDom4.chr4 336354028 47 + 430141050 -----TTAACACAT----ATATA-------T-----GTATATGCACTATTAAAAGATTATCATTTAAT----------
|
|
2392
|
+
i monDom4.chr4 C 0 C 0
|
|
2393
|
+
s echTel1.scaffold_123517 890 23 + 1275 ------------------AACTC-------C-----CCTACCCCCCT-----------ATTACT--------------
|
|
2394
|
+
i echTel1.scaffold_123517 N 0 C 0
|
|
2395
|
+
s fr1.chrUn 320906912 38 + 349519338 --------------ATACGATTCAACATCAT-----ACAATTTCACC-----------CCCTTCTTCT----------
|
|
2396
|
+
i fr1.chrUn C 0 C 0
|
|
2397
|
+
|
|
2398
|
+
a score=-19675.000000
|
|
2399
|
+
s mm8.chrM 16110 54 + 16299 TAA-------------------------TGCCAAAC---CCCAAAAACACTAA-GAACTTGAAAGACATATAATATTAA-CTAT
|
|
2400
|
+
s rn4.chrM 16099 54 + 16300 CAA-------------------------TGCCAAAC---CCCAAAAACATTAA--AGCAAGAATTAAATAAAACAAAAAGCTAC
|
|
2401
|
+
i rn4.chrM C 0 C 0
|
|
2402
|
+
s hg18.chr8 77619479 61 - 146274826 TAA---------------ACATAC-TCTTGCCAAAC---CCCAAAAACAAGA---GACTAAAATGCAACCCAGTTTTGA-TTAT
|
|
2403
|
+
i hg18.chr8 I 14 N 0
|
|
2404
|
+
s panTro2.chr8 79213354 61 - 145085868 TAA---------------ACATAC-TCTTGCCAAAC---CCCAAAAACAAGA---GACTAAAATGCAACCCAGTTTTGA-TTAT
|
|
2405
|
+
i panTro2.chr8 I 14 N 0
|
|
2406
|
+
s echTel1.scaffold_123517 913 69 + 1275 TAATGTTTAGA-----TAATATGCATCTTGCCAAAC---CCCAAAAACAA-----AACTTAAAATAAATACCCGATTAA-GTA-
|
|
2407
|
+
i echTel1.scaffold_123517 C 0 N 0
|
|
2408
|
+
s monDom4.chr4 336354075 53 + 430141050 TAA-------------------------TTTTAAGCTGACATTAAATCAATG---ATCTGAAGACATATATTTACATTA-TT--
|
|
2409
|
+
i monDom4.chr4 C 0 C 0
|
|
2410
|
+
s fr1.chrUn 320906950 67 + 349519338 ----TTTTAAAAAAATTAACGTATACCCCCCCTACCCCCCCTACAAATAGGAGAGACCTTTAAGTTTGGAC-------------
|
|
2411
|
+
i fr1.chrUn C 0 C 0
|
|
2412
|
+
|
|
2413
|
+
a score=-9447.000000
|
|
2414
|
+
s mm8.chrM 16164 97 + 16299 CAAACCCT--ATGTCCTGATCAATTCTAGTAG----TTCCCAAAA------------TATGACTTATATTTTAGTACTTGTAAAAATTT----TACAAAATCATGTTCCGTGAACCAAA
|
|
2415
|
+
s rn4.chrM 16153 87 + 16300 TTAATTCTTAAAAGGCTTCTCCATTCTAGTAG----ACCACAAAA-----------TTTTAACTTAAATCTTAGCATTGGTAAAATTTCCCGACACAAAATC-----------------
|
|
2416
|
+
i rn4.chrM C 0 N 0
|
|
2417
|
+
s monDom4.chr4 336354128 90 + 430141050 --------------------CCACCCAGGTGA----TGGAAGCAAGCATGaatttataataatttatatattattaagtgaatataatt----taaagtat-atattCATTAAACCCAA
|
|
2418
|
+
i monDom4.chr4 C 0 N 0
|
|
2419
|
+
s fr1.chrUn 320907017 73 + 349519338 CAAGCTCT------------CCACttaattaaatattcatcatat-----------tattatcatatattataatattataataatat-----aattatat------------------
|
|
2420
|
+
i fr1.chrUn C 0 N 0
|
|
2421
|
+
|