bio-gemma-wrapper 0.92.2 → 0.97
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/VERSION +1 -1
- data/bin/gemma-wrapper +7 -5
- metadata +3 -3
checksums.yaml
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@@ -1,7 +1,7 @@
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---
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SHA1:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 9339be44d799349592c257f655bfe3e94ced5011
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data.tar.gz: '09ec3c233405a6481bd19dade1ee03fa71362df8'
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 13829ee7a9a78b56695a02b9c0fe8a4aeab0454b7a6887def6452351bf455e935944664976df9642e4657ef7ffad64b53c1f865f0d08e8520d0b72eac0eba5fc
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7
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data.tar.gz: ad92a7187e829869122030615f56354e14a44f91135b29a7f84dc869819639723dd15c6757cc0d9141cf82edcfc4acb1542d8bc9c9f61760ff1038f18fcd742b
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data/VERSION
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@@ -1 +1 @@
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0.
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0.97
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data/bin/gemma-wrapper
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@@ -4,7 +4,7 @@
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# Author:: Pjotr Prins
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# License:: GPL3
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#
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# Copyright (C) 2017 Pjotr Prins <pjotr.prins@thebird.nl>
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# Copyright (C) 2017,2018 Pjotr Prins <pjotr.prins@thebird.nl>
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USAGE = "GEMMA wrapper example:
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@@ -35,8 +35,9 @@ USAGE = "GEMMA wrapper example:
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-debug > GWA.json
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"
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# These are used for testing compatibility
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GEMMA_V_MAJOR = 97
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GEMMA_V_MINOR =
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GEMMA_V_MINOR = 0
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basepath = File.dirname(File.dirname(__FILE__))
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$: << File.join(basepath,'lib')
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@@ -153,17 +154,18 @@ info = lambda do |*msg|
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end
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GEMMA_K_VERSION=version
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GEMMA_K_BANNER = "gemma-wrapper #{version} (Ruby #{RUBY_VERSION}) by Pjotr Prins 2017\n"
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GEMMA_K_BANNER = "gemma-wrapper #{version} (Ruby #{RUBY_VERSION}) by Pjotr Prins 2017,2018\n"
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info.call GEMMA_K_BANNER
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# Check gemma version
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GEMMA_COMMAND=options[:gemma_command]
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gemma_version_header = `#{GEMMA_COMMAND}`.split("\n").grep(/Version/)[0].strip
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gemma_version_header = `#{GEMMA_COMMAND}`.split("\n").grep(/GEMMA|Version/)[0].strip
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info.call "Using GEMMA ",gemma_version_header,"\n"
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gemma_version = gemma_version_header.split(/[,\s]+/)[1]
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v_version, v_major, v_minor = gemma_version.split(".")
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info.call "Found #{gemma_version}, comparing against expected v0.#{GEMMA_V_MAJOR}.#{GEMMA_V_MINOR}"
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warning.call "GEMMA version is out of date. Update GEMMA to 0.#{GEMMA_V_MAJOR}.#{GEMMA_V_MINOR}!" if v_major.to_i < GEMMA_V_MAJOR or (v_major.to_i == GEMMA_V_MAJOR and (v_minor != nil and v_minor.to_i < GEMMA_V_MINOR))
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options[:gemma_version_header] = gemma_version_header
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options[:gemma_version] = gemma_version
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metadata
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: bio-gemma-wrapper
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version: !ruby/object:Gem::Version
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version: 0.
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version: '0.97'
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platform: ruby
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authors:
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- Pjotr Prins
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autorequire:
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bindir: bin
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cert_chain: []
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date:
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date: 2018-02-10 00:00:00.000000000 Z
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dependencies: []
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description: GEMMA wrapper caches K between runs with LOCO support
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email: pjotr.public01@thebird.nl
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@@ -43,7 +43,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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version: '0'
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requirements: []
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rubyforge_project:
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rubygems_version: 2.
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rubygems_version: 2.6.8
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signing_key:
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specification_version: 4
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summary: Cache GEMMA with LOCO
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