bio-band 0.1.3 → 0.1.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (46) hide show
  1. data/Gemfile +1 -0
  2. data/Gemfile.lock +5 -0
  3. data/Jarfile +1 -1
  4. data/Jarfile.lock +1 -1
  5. data/README.rdoc +2 -0
  6. data/Rakefile +2 -1
  7. data/VERSION +1 -1
  8. data/band_server/client.rb +35 -0
  9. data/band_server/client_alt.rb +35 -0
  10. data/band_server/first_dataset.csv +15 -0
  11. data/band_server/second_dataset.csv +15 -0
  12. data/band_server/simple_server.rb +95 -0
  13. data/band_server/third_dataset.csv +15 -0
  14. data/band_server/uploads/first_dataset.csv +15 -0
  15. data/band_server/uploads/second_dataset.csv +15 -0
  16. data/band_server/uploads/third_dataset.csv +15 -0
  17. data/bio-band.gemspec +19 -3
  18. data/features/step_definitions/weka_classifiers.rb +3 -2
  19. data/features/weka_classifiers.feature +13 -13
  20. data/lib/bio-band.rb +2 -0
  21. data/lib/bio-band/apache/stat/inference.rb +25 -19
  22. data/lib/bio-band/apache/stat/regression.rb +2 -2
  23. data/lib/bio-band/core/parser/parser.rb +6 -6
  24. data/lib/bio-band/core/type/instances.rb +15 -5
  25. data/lib/bio-band/weka/attribute_selection/attribute_selection_utils.rb +2 -0
  26. data/lib/bio-band/weka/attribute_selection/evaluators.rb +2 -1
  27. data/lib/bio-band/weka/attribute_selection/search.rb +1 -0
  28. data/lib/bio-band/weka/classifiers/bayes/bayes.rb +1 -0
  29. data/lib/bio-band/weka/classifiers/bayes/bayes_utils.rb +16 -3
  30. data/lib/bio-band/weka/classifiers/evaluation.rb +9 -9
  31. data/lib/bio-band/weka/classifiers/functions/functions.rb +1 -0
  32. data/lib/bio-band/weka/classifiers/functions/functions_utils.rb +16 -3
  33. data/lib/bio-band/weka/classifiers/lazy/lazy_utils.rb +21 -3
  34. data/lib/bio-band/weka/classifiers/mi/mi.rb +1 -0
  35. data/lib/bio-band/weka/classifiers/mi/mi_utils.rb +18 -3
  36. data/lib/bio-band/weka/classifiers/rules/rules_utils.rb +20 -4
  37. data/lib/bio-band/weka/classifiers/trees/trees.rb +1 -0
  38. data/lib/bio-band/weka/classifiers/trees/trees_utils.rb +20 -3
  39. data/lib/bio-band/weka/clusterers/clusterers.rb +37 -13
  40. data/lib/bio-band/weka/clusterers/clusterers_utils.rb +60 -35
  41. data/lib/bio-band/weka/filters/unsupervised/attribute/attribute.rb +9 -1
  42. data/test/helper.rb +18 -0
  43. data/test/test_apacheCorrelation.rb +22 -0
  44. data/test/test_apacheInference.rb +46 -0
  45. data/test/test_bio-band.rb +9 -0
  46. metadata +33 -2
metadata CHANGED
@@ -2,14 +2,14 @@
2
2
  name: bio-band
3
3
  version: !ruby/object:Gem::Version
4
4
  prerelease:
5
- version: 0.1.3
5
+ version: 0.1.4
6
6
  platform: ruby
7
7
  authors:
8
8
  - arrigonialberto86
9
9
  autorequire:
10
10
  bindir: bin
11
11
  cert_chain: []
12
- date: 2013-09-02 00:00:00.000000000 Z
12
+ date: 2013-09-11 00:00:00.000000000 Z
13
13
  dependencies:
14
14
  - !ruby/object:Gem::Dependency
15
15
  name: shoulda
@@ -29,6 +29,24 @@ dependencies:
29
29
  none: false
30
30
  prerelease: false
31
31
  type: :development
32
+ - !ruby/object:Gem::Dependency
33
+ name: test-unit
34
+ version_requirements: !ruby/object:Gem::Requirement
35
+ requirements:
36
+ - - ">="
37
+ - !ruby/object:Gem::Version
38
+ version: !binary |-
39
+ MA==
40
+ none: false
41
+ requirement: !ruby/object:Gem::Requirement
42
+ requirements:
43
+ - - ">="
44
+ - !ruby/object:Gem::Version
45
+ version: !binary |-
46
+ MA==
47
+ none: false
48
+ prerelease: false
49
+ type: :development
32
50
  - !ruby/object:Gem::Dependency
33
51
  name: rdoc
34
52
  version_requirements: !ruby/object:Gem::Requirement
@@ -219,6 +237,15 @@ files:
219
237
  - README.rdoc
220
238
  - Rakefile
221
239
  - VERSION
240
+ - band_server/client.rb
241
+ - band_server/client_alt.rb
242
+ - band_server/first_dataset.csv
243
+ - band_server/second_dataset.csv
244
+ - band_server/simple_server.rb
245
+ - band_server/third_dataset.csv
246
+ - band_server/uploads/first_dataset.csv
247
+ - band_server/uploads/second_dataset.csv
248
+ - band_server/uploads/third_dataset.csv
222
249
  - bin/bio-band
223
250
  - bio-band.gemspec
224
251
  - ext/mkrf_conf.rb
@@ -278,6 +305,10 @@ files:
278
305
  - resources/weather.numeric.arff
279
306
  - spec/bio-band_spec.rb
280
307
  - spec/spec_helper.rb
308
+ - test/helper.rb
309
+ - test/test_apacheCorrelation.rb
310
+ - test/test_apacheInference.rb
311
+ - test/test_bio-band.rb
281
312
  homepage: http://github.com/arrigonialberto86/bioruby-band
282
313
  licenses:
283
314
  - MIT