bio-band 0.1.3 → 0.1.4

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Files changed (46) hide show
  1. data/Gemfile +1 -0
  2. data/Gemfile.lock +5 -0
  3. data/Jarfile +1 -1
  4. data/Jarfile.lock +1 -1
  5. data/README.rdoc +2 -0
  6. data/Rakefile +2 -1
  7. data/VERSION +1 -1
  8. data/band_server/client.rb +35 -0
  9. data/band_server/client_alt.rb +35 -0
  10. data/band_server/first_dataset.csv +15 -0
  11. data/band_server/second_dataset.csv +15 -0
  12. data/band_server/simple_server.rb +95 -0
  13. data/band_server/third_dataset.csv +15 -0
  14. data/band_server/uploads/first_dataset.csv +15 -0
  15. data/band_server/uploads/second_dataset.csv +15 -0
  16. data/band_server/uploads/third_dataset.csv +15 -0
  17. data/bio-band.gemspec +19 -3
  18. data/features/step_definitions/weka_classifiers.rb +3 -2
  19. data/features/weka_classifiers.feature +13 -13
  20. data/lib/bio-band.rb +2 -0
  21. data/lib/bio-band/apache/stat/inference.rb +25 -19
  22. data/lib/bio-band/apache/stat/regression.rb +2 -2
  23. data/lib/bio-band/core/parser/parser.rb +6 -6
  24. data/lib/bio-band/core/type/instances.rb +15 -5
  25. data/lib/bio-band/weka/attribute_selection/attribute_selection_utils.rb +2 -0
  26. data/lib/bio-band/weka/attribute_selection/evaluators.rb +2 -1
  27. data/lib/bio-band/weka/attribute_selection/search.rb +1 -0
  28. data/lib/bio-band/weka/classifiers/bayes/bayes.rb +1 -0
  29. data/lib/bio-band/weka/classifiers/bayes/bayes_utils.rb +16 -3
  30. data/lib/bio-band/weka/classifiers/evaluation.rb +9 -9
  31. data/lib/bio-band/weka/classifiers/functions/functions.rb +1 -0
  32. data/lib/bio-band/weka/classifiers/functions/functions_utils.rb +16 -3
  33. data/lib/bio-band/weka/classifiers/lazy/lazy_utils.rb +21 -3
  34. data/lib/bio-band/weka/classifiers/mi/mi.rb +1 -0
  35. data/lib/bio-band/weka/classifiers/mi/mi_utils.rb +18 -3
  36. data/lib/bio-band/weka/classifiers/rules/rules_utils.rb +20 -4
  37. data/lib/bio-band/weka/classifiers/trees/trees.rb +1 -0
  38. data/lib/bio-band/weka/classifiers/trees/trees_utils.rb +20 -3
  39. data/lib/bio-band/weka/clusterers/clusterers.rb +37 -13
  40. data/lib/bio-band/weka/clusterers/clusterers_utils.rb +60 -35
  41. data/lib/bio-band/weka/filters/unsupervised/attribute/attribute.rb +9 -1
  42. data/test/helper.rb +18 -0
  43. data/test/test_apacheCorrelation.rb +22 -0
  44. data/test/test_apacheInference.rb +46 -0
  45. data/test/test_bio-band.rb +9 -0
  46. metadata +33 -2
metadata CHANGED
@@ -2,14 +2,14 @@
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  name: bio-band
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  version: !ruby/object:Gem::Version
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  prerelease:
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- version: 0.1.3
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+ version: 0.1.4
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  platform: ruby
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  authors:
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  - arrigonialberto86
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2013-09-02 00:00:00.000000000 Z
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+ date: 2013-09-11 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: shoulda
@@ -29,6 +29,24 @@ dependencies:
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  none: false
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  prerelease: false
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  type: :development
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+ - !ruby/object:Gem::Dependency
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+ name: test-unit
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: !binary |-
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+ MA==
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+ none: false
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: !binary |-
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+ MA==
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+ none: false
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+ prerelease: false
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+ type: :development
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  - !ruby/object:Gem::Dependency
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  name: rdoc
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  version_requirements: !ruby/object:Gem::Requirement
@@ -219,6 +237,15 @@ files:
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  - README.rdoc
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  - Rakefile
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  - VERSION
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+ - band_server/client.rb
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+ - band_server/client_alt.rb
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+ - band_server/first_dataset.csv
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+ - band_server/second_dataset.csv
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+ - band_server/simple_server.rb
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+ - band_server/third_dataset.csv
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+ - band_server/uploads/first_dataset.csv
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+ - band_server/uploads/second_dataset.csv
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+ - band_server/uploads/third_dataset.csv
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  - bin/bio-band
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  - bio-band.gemspec
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  - ext/mkrf_conf.rb
@@ -278,6 +305,10 @@ files:
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  - resources/weather.numeric.arff
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  - spec/bio-band_spec.rb
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  - spec/spec_helper.rb
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+ - test/helper.rb
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+ - test/test_apacheCorrelation.rb
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+ - test/test_apacheInference.rb
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+ - test/test_bio-band.rb
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  homepage: http://github.com/arrigonialberto86/bioruby-band
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  licenses:
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  - MIT