bio-assembly 0.0.0
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- data/.document +5 -0
- data/Gemfile +14 -0
- data/Gemfile.lock +22 -0
- data/LICENSE.txt +20 -0
- data/README.rdoc +19 -0
- data/Rakefile +53 -0
- data/VERSION +1 -0
- data/bio-assembly.gemspec +71 -0
- data/data/example1.ace +44901 -0
- data/lib/bio-assembly.rb +169 -0
- data/lib/bio-assembly/contig.rb +97 -0
- data/lib/bio-assembly/read.rb +93 -0
- data/lib/bio-assembly/read/ace.rb +39 -0
- data/test/helper.rb +18 -0
- data/test/test_bio-assembly.rb +78 -0
- metadata +158 -0
metadata
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--- !ruby/object:Gem::Specification
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name: bio-assembly
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version: !ruby/object:Gem::Version
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hash: 31
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prerelease: false
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segments:
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- 0
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- 0
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- 0
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version: 0.0.0
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platform: ruby
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authors:
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- Chase Miller
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2010-12-27 00:00:00 -05:00
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default_executable:
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dependencies:
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- !ruby/object:Gem::Dependency
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type: :development
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prerelease: false
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name: shoulda
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version_requirements: &id001 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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hash: 3
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segments:
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- 0
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version: "0"
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requirement: *id001
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- !ruby/object:Gem::Dependency
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type: :development
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prerelease: false
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name: bundler
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version_requirements: &id002 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ~>
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- !ruby/object:Gem::Version
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hash: 23
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segments:
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- 1
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- 0
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- 0
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version: 1.0.0
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requirement: *id002
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- !ruby/object:Gem::Dependency
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type: :development
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prerelease: false
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name: jeweler
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version_requirements: &id003 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ~>
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- !ruby/object:Gem::Version
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hash: 7
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segments:
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- 1
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- 5
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- 2
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version: 1.5.2
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requirement: *id003
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- !ruby/object:Gem::Dependency
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type: :development
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prerelease: false
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name: rcov
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version_requirements: &id004 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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hash: 3
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segments:
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- 0
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version: "0"
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requirement: *id004
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- !ruby/object:Gem::Dependency
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type: :development
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prerelease: false
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name: bio
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version_requirements: &id005 !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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hash: 5
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segments:
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- 1
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- 4
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- 1
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version: 1.4.1
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requirement: *id005
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description: provides functionality to parse, write, and manipulate assembly data
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email: chmille4@gmail.com
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executables: []
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extensions: []
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extra_rdoc_files:
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- LICENSE.txt
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- README.rdoc
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files:
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- .document
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- Gemfile
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- Gemfile.lock
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- LICENSE.txt
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- README.rdoc
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- Rakefile
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- VERSION
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- bio-assembly.gemspec
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- data/example1.ace
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- lib/bio-assembly.rb
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- lib/bio-assembly/contig.rb
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- lib/bio-assembly/read.rb
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- lib/bio-assembly/read/ace.rb
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- test/helper.rb
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- test/test_bio-assembly.rb
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has_rdoc: true
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homepage: http://github.com/chmille4/bioruby-assembly
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licenses:
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- MIT
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post_install_message:
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rdoc_options: []
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require_paths:
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- lib
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required_ruby_version: !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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hash: 3
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segments:
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- 0
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version: "0"
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required_rubygems_version: !ruby/object:Gem::Requirement
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none: false
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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hash: 3
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segments:
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- 0
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version: "0"
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requirements: []
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rubyforge_project:
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rubygems_version: 1.3.7
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signing_key:
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specification_version: 3
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summary: BioRuby Assembly plugin
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test_files:
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157
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- test/helper.rb
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158
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- test/test_bio-assembly.rb
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