bibliothecary 8.3.5 → 8.3.6
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- checksums.yaml +4 -4
- data/.rubocop.yml +565 -683
- data/Rakefile +1 -1
- data/bibliothecary.gemspec +2 -0
- data/lib/bibliothecary/multi_parsers/dependencies_csv.rb +4 -4
- data/lib/bibliothecary/parsers/cargo.rb +15 -9
- data/lib/bibliothecary/parsers/carthage.rb +1 -1
- data/lib/bibliothecary/parsers/conda.rb +7 -7
- data/lib/bibliothecary/parsers/go.rb +1 -1
- data/lib/bibliothecary/parsers/npm.rb +6 -12
- data/lib/bibliothecary/parsers/nuget.rb +15 -9
- data/lib/bibliothecary/parsers/pypi.rb +25 -9
- data/lib/bibliothecary/runner/multi_manifest_filter.rb +30 -7
- data/lib/bibliothecary/version.rb +1 -1
- metadata +30 -2
data/Rakefile
CHANGED
data/bibliothecary.gemspec
CHANGED
@@ -34,4 +34,6 @@ Gem::Specification.new do |spec|
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|
34
34
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spec.add_development_dependency "rspec", "~> 3.0"
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spec.add_development_dependency "webmock"
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36
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spec.add_development_dependency "vcr"
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37
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+
spec.add_development_dependency "rubocop"
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38
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+
spec.add_development_dependency "rubocop-rails"
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end
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@@ -41,8 +41,8 @@ module Bibliothecary
|
|
41
41
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"lockfile_requirement" => {
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match: [
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/^(lockfile |)requirement$/i,
|
44
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-
/^version$/i
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45
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-
]
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+
/^version$/i
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+
]
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},
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# Manifests have versions that can have operators.
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# However, since Bibliothecary only currently supports analyzing a
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@@ -52,8 +52,8 @@ module Bibliothecary
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"requirement" => {
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match: [
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/^(lockfile |)requirement$/i,
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-
/^version$/i
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-
]
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+
/^version$/i
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+
]
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},
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"type" => {
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default: "runtime",
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@@ -21,17 +21,23 @@ module Bibliothecary
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def self.parse_manifest(file_contents, options: {})
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manifest = Tomlrb.parse(file_contents)
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-
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-
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26
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-
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+
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+
parsed_dependencies = []
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+
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+
manifest.fetch_values('dependencies', 'dev-dependencies').each_with_index do |deps, index|
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+
parsed_dependencies << deps.map do |name, requirement|
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29
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+
if requirement.respond_to?(:fetch)
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+
requirement = requirement['version'] or next
|
31
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+
end
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{
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+
name: name,
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+
requirement: requirement,
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+
type: index.zero? ? 'runtime' : 'development'
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+
}
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end
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-
{
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-
name: name,
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-
requirement: requirement,
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-
type: 'runtime'
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-
}
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38
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end
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34
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-
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+
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+
parsed_dependencies.flatten.compact
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end
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36
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def self.parse_lockfile(file_contents, options: {})
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@@ -35,7 +35,7 @@ module Bibliothecary
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end
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36
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def self.map_dependencies(manifest, path)
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-
response = Typhoeus.post("#{Bibliothecary.configuration.carthage_parser_host}/#{path}", params: {body: manifest})
|
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+
response = Typhoeus.post("#{Bibliothecary.configuration.carthage_parser_host}/#{path}", params: { body: manifest })
|
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raise Bibliothecary::RemoteParsingError.new("Http Error #{response.response_code} when contacting: #{Bibliothecary.configuration.carthage_parser_host}/#{path}", response.response_code) unless response.success?
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json = JSON.parse(response.body)
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@@ -9,20 +9,20 @@ module Bibliothecary
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9
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{
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match_filename("environment.yml") => {
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parser: :parse_conda,
|
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-
kind: "manifest"
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12
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+
kind: "manifest"
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},
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match_filename("environment.yaml") => {
|
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parser: :parse_conda,
|
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-
kind: "manifest"
|
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+
kind: "manifest"
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},
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match_filename("environment.yml.lock") => {
|
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parser: :parse_conda_lockfile,
|
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-
kind: "lockfile"
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+
kind: "lockfile"
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},
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match_filename("environment.yaml.lock") => {
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parser: :parse_conda_lockfile,
|
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-
kind: "lockfile"
|
25
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-
}
|
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+
kind: "lockfile"
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+
}
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}
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end
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@@ -47,12 +47,12 @@ module Bibliothecary
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response = Typhoeus.post(
|
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"#{host}/parse",
|
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headers: {
|
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-
ContentType: "multipart/form-data"
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+
ContentType: "multipart/form-data"
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},
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body: {
|
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file: file_contents,
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# Unfortunately we do not get the filename in the mapping parsers, so hardcoding the file name depending on the kind
|
55
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-
filename: kind == "manifest" ? "environment.yml" : "environment.yml.lock"
|
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+
filename: kind == "manifest" ? "environment.yml" : "environment.yml.lock"
|
56
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}
|
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)
|
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raise Bibliothecary::RemoteParsingError.new("Http Error #{response.response_code} when contacting: #{host}/parse", response.response_code) unless response.success?
|
@@ -36,22 +36,16 @@ module Bibliothecary
|
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add_multi_parser(Bibliothecary::MultiParsers::CycloneDX)
|
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add_multi_parser(Bibliothecary::MultiParsers::DependenciesCSV)
|
38
38
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|
39
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-
def self.parse_shrinkwrap(file_contents, options: {})
|
40
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-
manifest = JSON.parse(file_contents)
|
41
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-
manifest.fetch('dependencies',[]).map do |name, requirement|
|
42
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-
{
|
43
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-
name: name,
|
44
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-
requirement: requirement["version"],
|
45
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-
type: 'runtime'
|
46
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-
}
|
47
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-
end
|
48
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-
end
|
49
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-
|
50
39
|
def self.parse_package_lock(file_contents, options: {})
|
51
40
|
manifest = JSON.parse(file_contents)
|
52
41
|
parse_package_lock_deps_recursively(manifest.fetch('dependencies', []))
|
53
42
|
end
|
54
43
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|
44
|
+
class << self
|
45
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+
# "package-lock.json" and "npm-shrinkwrap.json" have same format, so use same parsing logic
|
46
|
+
alias_method :parse_shrinkwrap, :parse_package_lock
|
47
|
+
end
|
48
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+
|
55
49
|
def self.parse_package_lock_deps_recursively(dependencies, depth=1)
|
56
50
|
dependencies.flat_map do |name, requirement|
|
57
51
|
type = requirement.fetch("dev", false) ? 'development' : 'runtime'
|
@@ -61,7 +55,7 @@ module Bibliothecary
|
|
61
55
|
[]
|
62
56
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else
|
63
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|
parse_package_lock_deps_recursively(requirement.fetch('dependencies', []), depth + 1)
|
64
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-
|
58
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+
end
|
65
59
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|
66
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[{
|
67
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|
name: name,
|
@@ -40,7 +40,7 @@ module Bibliothecary
|
|
40
40
|
match_filename("project.assets.json") => {
|
41
41
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kind: 'lockfile',
|
42
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parser: :parse_project_assets_json
|
43
|
-
}
|
43
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+
}
|
44
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}
|
45
45
|
end
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|
@@ -80,7 +80,7 @@ module Bibliothecary
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# do that yet so at least pick deterministically.
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81
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# Note, frameworks can be empty, so remove empty ones and then return the last sorted item if any
|
83
|
-
frameworks = frameworks.delete_if { |
|
83
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+
frameworks = frameworks.delete_if { |_k, v| v.empty? }
|
84
84
|
return frameworks[frameworks.keys.sort.last] unless frameworks.empty?
|
85
85
|
end
|
86
86
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[]
|
@@ -92,7 +92,7 @@ module Bibliothecary
|
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92
92
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{
|
93
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name: dependency.id,
|
94
94
|
requirement: (dependency.version if dependency.respond_to? "version") || "*",
|
95
|
-
type: 'runtime'
|
95
|
+
type: dependency.respond_to?("developmentDependency") && dependency.developmentDependency == "true" ? 'development' : 'runtime'
|
96
96
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}
|
97
97
|
end
|
98
98
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rescue
|
@@ -102,16 +102,22 @@ module Bibliothecary
|
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102
102
|
def self.parse_csproj(file_contents, options: {})
|
103
103
|
manifest = Ox.parse file_contents
|
104
104
|
|
105
|
-
packages = manifest.locate('ItemGroup/PackageReference').map do |dependency|
|
105
|
+
packages = manifest.locate('ItemGroup/PackageReference').select{ |dep| dep.respond_to? "Include" }.map do |dependency|
|
106
106
|
requirement = (dependency.Version if dependency.respond_to? "Version") || "*"
|
107
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|
if requirement.is_a?(Ox::Element)
|
108
108
|
requirement = dependency.nodes.detect{ |n| n.value == "Version" }&.text
|
109
109
|
end
|
110
110
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|
111
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+
type = if dependency.nodes.first && dependency.nodes.first.nodes.include?("all") && dependency.nodes.first.value.include?("PrivateAssets") || dependency.attributes[:PrivateAssets] == "All"
|
112
|
+
"development"
|
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+
else
|
114
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+
"runtime"
|
115
|
+
end
|
116
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+
|
111
117
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{
|
112
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|
name: dependency.Include,
|
113
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|
requirement: requirement,
|
114
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-
type:
|
120
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+
type: type
|
115
121
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}
|
116
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|
end
|
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|
packages.uniq {|package| package[:name] }
|
@@ -125,7 +131,7 @@ module Bibliothecary
|
|
125
131
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{
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126
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name: dependency.id,
|
127
133
|
requirement: dependency.attributes[:version] || '*',
|
128
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-
type: 'runtime'
|
134
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+
type: dependency.respond_to?("developmentDependency") && dependency.developmentDependency == "true" ? 'development' : 'runtime'
|
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}
|
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end
|
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rescue
|
@@ -152,8 +158,8 @@ module Bibliothecary
|
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152
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frameworks = {}
|
153
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manifest.fetch("targets",[]).each do |framework, deps|
|
154
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frameworks[framework] = deps
|
155
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-
.select { |
|
156
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-
.map do |name,
|
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+
.select { |_name, details| details["type"] == "package" }
|
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+
.map do |name, _details|
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157
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|
name_split = name.split("/")
|
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{
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name: name_split[0],
|
@@ -168,7 +174,7 @@ module Bibliothecary
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# do that yet so at least pick deterministically.
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|
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# Note, frameworks can be empty, so remove empty ones and then return the last sorted item if any
|
171
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-
frameworks = frameworks.delete_if { |
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177
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+
frameworks = frameworks.delete_if { |_k, v| v.empty? }
|
172
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|
return frameworks[frameworks.keys.sort.last] unless frameworks.empty?
|
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end
|
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[]
|
@@ -16,6 +16,13 @@ module Bibliothecary
|
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16
16
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def self.mapping
|
18
18
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{
|
19
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+
match_filenames('requirements-dev.txt', 'requirements/dev.txt',
|
20
|
+
'requirements-docs.txt', 'requirements/docs.txt',
|
21
|
+
'requirements-test.txt', 'requirements/test.txt',
|
22
|
+
'requirements-tools.txt', 'requirements/tools.txt') => {
|
23
|
+
kind: 'manifest',
|
24
|
+
parser: :parse_requirements_txt
|
25
|
+
},
|
19
26
|
lambda { |p| PIP_COMPILE_REGEXP.match(p) } => {
|
20
27
|
content_matcher: :pip_compile?,
|
21
28
|
kind: 'lockfile',
|
@@ -28,11 +35,11 @@ module Bibliothecary
|
|
28
35
|
},
|
29
36
|
match_filename('requirements.frozen') => { # pattern exists to store frozen deps in requirements.frozen
|
30
37
|
parser: :parse_requirements_txt,
|
31
|
-
kind: 'lockfile'
|
38
|
+
kind: 'lockfile'
|
32
39
|
},
|
33
40
|
match_filename('pip-resolved-dependencies.txt') => { # Inferred from pip
|
34
41
|
kind: 'lockfile',
|
35
|
-
parser: :parse_requirements_txt
|
42
|
+
parser: :parse_requirements_txt
|
36
43
|
},
|
37
44
|
match_filename("setup.py") => {
|
38
45
|
kind: 'manifest',
|
@@ -58,20 +65,20 @@ module Bibliothecary
|
|
58
65
|
# Pip dependencies can be embedded in conda environment files
|
59
66
|
match_filename("environment.yml") => {
|
60
67
|
parser: :parse_conda,
|
61
|
-
kind: "manifest"
|
68
|
+
kind: "manifest"
|
62
69
|
},
|
63
70
|
match_filename("environment.yaml") => {
|
64
71
|
parser: :parse_conda,
|
65
|
-
kind: "manifest"
|
72
|
+
kind: "manifest"
|
66
73
|
},
|
67
74
|
match_filename("environment.yml.lock") => {
|
68
75
|
parser: :parse_conda,
|
69
|
-
kind: "lockfile"
|
76
|
+
kind: "lockfile"
|
70
77
|
},
|
71
78
|
match_filename("environment.yaml.lock") => {
|
72
79
|
parser: :parse_conda,
|
73
|
-
kind: "lockfile"
|
74
|
-
}
|
80
|
+
kind: "lockfile"
|
81
|
+
}
|
75
82
|
}
|
76
83
|
end
|
77
84
|
|
@@ -191,6 +198,15 @@ module Bibliothecary
|
|
191
198
|
# Invalid lines in requirements.txt are skipped.
|
192
199
|
def self.parse_requirements_txt(file_contents, options: {})
|
193
200
|
deps = []
|
201
|
+
type = case options[:filename]
|
202
|
+
when /dev/ || /docs/ || /tools/
|
203
|
+
'development'
|
204
|
+
when /test/
|
205
|
+
'test'
|
206
|
+
else
|
207
|
+
'runtime'
|
208
|
+
end
|
209
|
+
|
194
210
|
file_contents.split("\n").each do |line|
|
195
211
|
if line['://']
|
196
212
|
begin
|
@@ -200,7 +216,7 @@ module Bibliothecary
|
|
200
216
|
end
|
201
217
|
|
202
218
|
deps << result.merge(
|
203
|
-
type:
|
219
|
+
type: type
|
204
220
|
)
|
205
221
|
else
|
206
222
|
match = line.delete(' ').match(REQUIREMENTS_REGEXP)
|
@@ -209,7 +225,7 @@ module Bibliothecary
|
|
209
225
|
deps << {
|
210
226
|
name: match[1],
|
211
227
|
requirement: match[-1] || '*',
|
212
|
-
type:
|
228
|
+
type: type
|
213
229
|
}
|
214
230
|
end
|
215
231
|
end
|
@@ -1,6 +1,21 @@
|
|
1
1
|
module Bibliothecary
|
2
2
|
class Runner
|
3
3
|
class MultiManifestFilter
|
4
|
+
# Wrap up a file analysis for easier validity testing
|
5
|
+
class FileAnalysis
|
6
|
+
def initialize(file_analysis)
|
7
|
+
@file_analysis = file_analysis
|
8
|
+
end
|
9
|
+
|
10
|
+
# Determine if we should skip this file analysis when processing
|
11
|
+
# @return [Boolean] True if we should skip processing
|
12
|
+
def skip?
|
13
|
+
!@file_analysis ||
|
14
|
+
!@file_analysis[:dependencies] ||
|
15
|
+
@file_analysis[:dependencies].empty?
|
16
|
+
end
|
17
|
+
end
|
18
|
+
|
4
19
|
def initialize(path:, related_files_info_entries:, runner:)
|
5
20
|
@path = path
|
6
21
|
@related_files_info_entries = related_files_info_entries
|
@@ -38,15 +53,14 @@ module Bibliothecary
|
|
38
53
|
return @multiple_file_results if @multiple_file_results
|
39
54
|
|
40
55
|
@multiple_file_results = []
|
41
|
-
@multiple_file_entries.each do |file|
|
42
|
-
analysis = @runner.analyse_file(file, File.read(File.join(@path, file)))
|
43
56
|
|
44
|
-
|
57
|
+
each_analysis_and_rfis do |analysis, rfis_for_file|
|
45
58
|
rfis_for_file.each do |rfi|
|
46
|
-
file_analysis =
|
59
|
+
file_analysis = FileAnalysis.new(
|
60
|
+
analysis.find { |a| a[:platform] == rfi.platform }
|
61
|
+
)
|
47
62
|
|
48
|
-
next
|
49
|
-
next if file_analysis[:dependencies].empty?
|
63
|
+
next if file_analysis.skip?
|
50
64
|
|
51
65
|
@multiple_file_results << rfi
|
52
66
|
end
|
@@ -55,8 +69,17 @@ module Bibliothecary
|
|
55
69
|
@multiple_file_results
|
56
70
|
end
|
57
71
|
|
72
|
+
def each_analysis_and_rfis
|
73
|
+
@multiple_file_entries.each do |file|
|
74
|
+
analysis = @runner.analyse_file(file, File.read(File.join(@path, file)))
|
75
|
+
rfis_for_file = @related_files_info_entries.find_all { |rfi| rfi.lockfiles.include?(file) }
|
76
|
+
|
77
|
+
yield analysis, rfis_for_file
|
78
|
+
end
|
79
|
+
end
|
80
|
+
|
58
81
|
def partition_file_entries!
|
59
|
-
@single_file_entries, @multiple_file_entries = files_to_check.partition { |
|
82
|
+
@single_file_entries, @multiple_file_entries = files_to_check.partition { |_file, count| count == 1 }
|
60
83
|
|
61
84
|
@single_file_entries = @single_file_entries.map(&:first)
|
62
85
|
@multiple_file_entries = @multiple_file_entries.map(&:first)
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: bibliothecary
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 8.3.
|
4
|
+
version: 8.3.6
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Andrew Nesbitt
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2022-07-
|
11
|
+
date: 2022-07-18 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: tomlrb
|
@@ -220,6 +220,34 @@ dependencies:
|
|
220
220
|
- - ">="
|
221
221
|
- !ruby/object:Gem::Version
|
222
222
|
version: '0'
|
223
|
+
- !ruby/object:Gem::Dependency
|
224
|
+
name: rubocop
|
225
|
+
requirement: !ruby/object:Gem::Requirement
|
226
|
+
requirements:
|
227
|
+
- - ">="
|
228
|
+
- !ruby/object:Gem::Version
|
229
|
+
version: '0'
|
230
|
+
type: :development
|
231
|
+
prerelease: false
|
232
|
+
version_requirements: !ruby/object:Gem::Requirement
|
233
|
+
requirements:
|
234
|
+
- - ">="
|
235
|
+
- !ruby/object:Gem::Version
|
236
|
+
version: '0'
|
237
|
+
- !ruby/object:Gem::Dependency
|
238
|
+
name: rubocop-rails
|
239
|
+
requirement: !ruby/object:Gem::Requirement
|
240
|
+
requirements:
|
241
|
+
- - ">="
|
242
|
+
- !ruby/object:Gem::Version
|
243
|
+
version: '0'
|
244
|
+
type: :development
|
245
|
+
prerelease: false
|
246
|
+
version_requirements: !ruby/object:Gem::Requirement
|
247
|
+
requirements:
|
248
|
+
- - ">="
|
249
|
+
- !ruby/object:Gem::Version
|
250
|
+
version: '0'
|
223
251
|
description:
|
224
252
|
email:
|
225
253
|
- andrewnez@gmail.com
|