bel_parser 1.0.8 → 1.1.1

data/lib/bel_parser/parsers/serializer.rb

@@ -53,7 +53,9 @@ module BELParser
       end
 
       def on_function(function_node)
-        @string << function_node.identifier.string_literal
+        if function_node.identifier
+          @string << function_node.identifier.string_literal
+        end
       end
 
       def on_identifier(identifier_node)
@@ -138,9 +140,11 @@ module BELParser
 
       def on_statement(statement_node)
         process(statement_node.subject)
-        return if statement_node.object.child.nil?
 
+        return unless statement_node.relationship?
         process(statement_node.relationship)
+
+        return unless statement_node.object?
         object_node = statement_node.object
         if object_node.statement?
           @string << '('
@@ -152,7 +156,7 @@ module BELParser
       end
 
       def on_string(string_node)
-        @string << %("#{string_node.string_literal}")
+        @string << %("#{string_node.string_value}")
       end
 
       def on_subject(subject_node)
@@ -197,7 +201,7 @@ if __FILE__ == $PROGRAM_NAME
 
   types      = ARGV.map(&:to_sym)
   generator  = BELParser::ASTGenerator.new($stdin)
-  BELParser::ASTFilter.new(generator, *types).each do |(num, line, results)|
+  BELParser::ASTFilter.new(generator, *types).each do |(_, _, results)|
     serializer = BELParser::Parsers::Serializer.new
     serializer.process(results.first)
     puts serializer.string

data/lib/bel_parser/version.rb

@@ -0,0 +1,33 @@
+module BELParser
+  # Captures the semantic version of the library.
+  module Version
+    # The frozen version {String}. See {Object#freeze}.
+    STRING =
+      File.read(
+        File.join(
+          File.expand_path(File.dirname(__FILE__)), '..', '..', 'VERSION'
+        )).chomp.freeze
+
+    # The frozen {Fixnum version numbers}. See {Object#freeze}.
+    MAJOR, MINOR, PATCH = STRING.split('.').map(&:freeze)
+    # The frozen {Array} of {Fixnum version numbers}. See {Object#freeze}.
+    VERSION_NUMBERS     = [MAJOR, MINOR, PATCH].freeze
+
+    # Add singleton methods to the metaclass of {BEL::Version}.
+    class << self
+
+      # Return the frozen, semantic version {String}.
+      # @return [frozen String] the semantic version
+      def to_s
+        STRING
+      end
+      alias :to_str :to_s
+
+      # Return the frozen, semantic version number {Array}.
+      # @return [frozen Array] the semantic version numbers
+      def to_a
+        VERSION_NUMBERS
+      end
+    end
+  end
+end

data/lib/bel_parser.rb

@@ -1,3 +1,6 @@
+# library version
+require 'bel_parser/version'
+
 # vendored 'ast' gem
 require 'bel_parser/vendor/ast'
 

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: bel_parser
 version: !ruby/object:Gem::Version
-  version: 1.0.8
+  version: 1.1.1
 platform: ruby
 authors:
 - Anthony Bargnesi
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2016-06-17 00:00:00.000000000 Z
+date: 2017-01-13 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: sparql-client
@@ -25,6 +25,20 @@ dependencies:
     - - "~>"
       - !ruby/object:Gem::Version
         version: 2.0.0
+- !ruby/object:Gem::Dependency
+  name: damerau-levenshtein
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - '='
+      - !ruby/object:Gem::Version
+        version: 1.2.0
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - '='
+      - !ruby/object:Gem::Version
+        version: 1.2.0
 description: Implements language versions 1.0 and 2.0.
 email: abargnesi@selventa.com
 executables:
@@ -57,6 +71,7 @@ files:
 - lib/bel_parser.rb
 - lib/bel_parser/ast_filter.rb
 - lib/bel_parser/ast_generator.rb
+- lib/bel_parser/completion.rb
 - lib/bel_parser/expression.rb
 - lib/bel_parser/expression/filter.rb
 - lib/bel_parser/expression/model.rb
@@ -80,6 +95,7 @@ files:
 - lib/bel_parser/language/semantics/function_deprecation.rb
 - lib/bel_parser/language/semantics/list_function_subject.rb
 - lib/bel_parser/language/semantics/multiple_subject_object.rb
+- lib/bel_parser/language/semantics/nested_statement_without_object.rb
 - lib/bel_parser/language/semantics/non_causal_nested_statement.rb
 - lib/bel_parser/language/semantics/non_object_list.rb
 - lib/bel_parser/language/semantics/relationship_deprecation.rb
@@ -294,6 +310,7 @@ files:
 - lib/bel_parser/language/version2_0/value_encodings/protein_abundance.rb
 - lib/bel_parser/language/version2_0/value_encodings/protein_modification.rb
 - lib/bel_parser/language/version2_0/value_encodings/rna_abundance.rb
+- lib/bel_parser/mixin/levenshtein.rb
 - lib/bel_parser/mixin/line_mapping.rb
 - lib/bel_parser/parsers/ast/node.rb
 - lib/bel_parser/parsers/ast/sexp.rb
@@ -321,6 +338,8 @@ files:
 - lib/bel_parser/parsers/common/identifier.rl
 - lib/bel_parser/parsers/common/list.rb
 - lib/bel_parser/parsers/common/list.rl
+- lib/bel_parser/parsers/common/multi_identifier.rb
+- lib/bel_parser/parsers/common/multi_identifier.rl
 - lib/bel_parser/parsers/common/string.rb
 - lib/bel_parser/parsers/common/string.rl
 - lib/bel_parser/parsers/expression.rb
@@ -336,6 +355,8 @@ files:
 - lib/bel_parser/parsers/expression/relationship.rl
 - lib/bel_parser/parsers/expression/simple_statement.rb
 - lib/bel_parser/parsers/expression/simple_statement.rl
+- lib/bel_parser/parsers/expression/statement_autocomplete.rb
+- lib/bel_parser/parsers/expression/statement_autocomplete.rl
 - lib/bel_parser/parsers/expression/term.rb
 - lib/bel_parser/parsers/expression/term.rl
 - lib/bel_parser/parsers/line_parser.rb
@@ -387,6 +408,7 @@ files:
 - lib/bel_parser/vendor/ast/processor.rb
 - lib/bel_parser/vendor/ast/processor/mixin.rb
 - lib/bel_parser/vendor/ast/sexp.rb
+- lib/bel_parser/version.rb
 homepage: https://github.com/OpenBEL/bel_parser
 licenses:
 - Apache-2.0
@@ -407,7 +429,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 2.5.1
+rubygems_version: 2.6.8
 signing_key: 
 specification_version: 4
 summary: Parser for Biolgical Expression Language.