bacterial-annotator 0.9.4 → 1.0.0
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- checksums.yaml +4 -4
- data/lib/bacterial-comparator.rb +3 -1
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 1dad9c41b499dc463758390648f19af38b55a660e0ac408303fca0383bbf9463
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4
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+
data.tar.gz: 3d58da07ceced3fabba23a685d8f7b25e0bddc511cd690a5e6b4e24666ad3c89
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: d860ebf490024dad6ec9a28c8b68a21cc8447b347236cff9938ebc372244fdcc3f414bb9f2280fa58bded32e221a5614d6b5d1e9e681837d8f8948c4a20dc3c2
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7
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+
data.tar.gz: 7ad1c1444c156679632129799120b303055e90316baceb2c17f3441afa58298aeaf7840f1bdc5989bb2931452cd76a26e723ed54a602d41f73efc781b23f5215
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data/lib/bacterial-comparator.rb
CHANGED
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@@ -615,7 +615,9 @@ class BacterialComparator
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615
615
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ref_synteny_prot.query_sequences.each do |prot, syn_val|
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616
616
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next if ! syn_val.has_key? :homology
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617
617
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next if syn_val[:homology][:assert_cutoff].inject(:+) < 3
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618
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-
next if ref_annotated.has_key? syn_val[:homology][:hits][0] and
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618
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+
next if ref_annotated.has_key? syn_val[:homology][:hits][0] and
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619
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+
ref_annotated[syn_val[:homology][:hits][0]][:partial] == 0 and
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620
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+
ref_annotated[syn_val[:homology][:hits][0]][:score] > syn_val[:homology][:score]
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619
621
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620
622
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ref_annotated[syn_val[:homology][:hits][0]] = {
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621
623
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key: prot,
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: bacterial-annotator
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.
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4
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+
version: 1.0.0
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Maxime Deraspe
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8
8
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autorequire:
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9
9
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bindir: bin
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10
10
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cert_chain: []
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11
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-
date:
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11
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+
date: 2024-01-13 00:00:00.000000000 Z
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12
12
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dependencies:
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13
13
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- !ruby/object:Gem::Dependency
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14
14
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name: bio
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