bacterial-annotator 0.9.4 → 1.0.0

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Files changed (3) hide show
  1. checksums.yaml +4 -4
  2. data/lib/bacterial-comparator.rb +3 -1
  3. metadata +2 -2
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@@ -615,7 +615,9 @@ class BacterialComparator
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  ref_synteny_prot.query_sequences.each do |prot, syn_val|
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  next if ! syn_val.has_key? :homology
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  next if syn_val[:homology][:assert_cutoff].inject(:+) < 3
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- next if ref_annotated.has_key? syn_val[:homology][:hits][0] and ref_annotated[syn_val[:homology][:hits][0]][:partial] == 0
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+ next if ref_annotated.has_key? syn_val[:homology][:hits][0] and
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+ ref_annotated[syn_val[:homology][:hits][0]][:partial] == 0 and
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+ ref_annotated[syn_val[:homology][:hits][0]][:score] > syn_val[:homology][:score]
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  ref_annotated[syn_val[:homology][:hits][0]] = {
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  key: prot,
metadata CHANGED
@@ -1,14 +1,14 @@
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  --- !ruby/object:Gem::Specification
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  name: bacterial-annotator
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  version: !ruby/object:Gem::Version
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- version: 0.9.4
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+ version: 1.0.0
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  platform: ruby
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  authors:
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  - Maxime Deraspe
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2023-07-17 00:00:00.000000000 Z
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+ date: 2024-01-13 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: bio