bacterial-annotator 0.8.5 → 0.8.6

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Files changed (3) hide show
  1. checksums.yaml +5 -5
  2. data/bin/ba_blat +4 -12
  3. metadata +3 -3
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
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  ---
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- SHA256:
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- metadata.gz: da5221d8f00eb6042cc1b7ea5f99101dc9acb7120c7e2c8f85833e3a1d52045f
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- data.tar.gz: 2836e79ce4062db2cd8ae795cbdcfeba81a8dfcaa6c44bf4610d1a4da20e4786
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+ SHA1:
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+ metadata.gz: dc2f69e483c0756ebfabea8c0badf0058b2e1e2a
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+ data.tar.gz: 0c4b2aeb231be810881677a791608515e8cfbad2
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  SHA512:
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- metadata.gz: 93f660143c5c67ed505c9cdd9ba6d41e70bc788e6578c0fb440de4519b60ca9b79297f2c149f6489a10b205ea3767e1f3649cc369dd7f1c4122843562200f179
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- data.tar.gz: 88e3aa0ed0a1f15cb27fe9ad61a216ba2bbd2cd0654c61f4105273eb041cfbfb07ae89e5f9e079178cdc81946b8c7bb73f38eefecc7bbd523858338bfafa4996
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+ metadata.gz: d14c312a87bd7a3b49e360bd22804b1d42145ef7c948542fb7ae49d40a4a042d906d9ccd86975af703406ebf327b6c1d19e3324c4231475a2a80411ec4e61dac
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+ data.tar.gz: d28eaae667a9d2c3ce77c77e0b2b05ec65ff87081a10082fbf328cb32545cd90e582634682b8bed9143812412971b01b568443b897b6b23df3be91eabc7a9a82
@@ -22,7 +22,6 @@ def installBlat
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  file.write(resp.body)
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  end
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  end
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-
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  File.chmod(0755, "#{ROOT_path}/blat.linux")
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  rescue
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  abort "Problem installing Blat, aborting"
@@ -41,18 +40,11 @@ if ! File.exists? "#{ROOT_path}/blat.linux"
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  puts "available on the Kent Informatics website (http://www.kentinformatics.com/)."
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  puts "See http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/"
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  puts ""
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- puts "Do you accept the license ? Y/n"
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+ puts "By using bacterial-annotator you explicitly accept the license."
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- answer = $stdin.gets.chomp
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-
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- if answer.downcase == "y" or answer.downcase == ""
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- puts "OK you accepted the licence let's install the blat binary"
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- installBlat
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- puts "Blat successfully installed : OK"
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- puts ""
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- else
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- puts "Sorry bacterial-annotator rely on blat for the alignment !"
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- end
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+ installBlat
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+ puts "Blat successfully installed : OK"
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+ puts ""
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  end
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metadata CHANGED
@@ -1,14 +1,14 @@
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  --- !ruby/object:Gem::Specification
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  name: bacterial-annotator
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  version: !ruby/object:Gem::Version
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- version: 0.8.5
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+ version: 0.8.6
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  platform: ruby
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  authors:
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  - Maxime Deraspe
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2018-07-19 00:00:00.000000000 Z
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+ date: 2018-07-31 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: bio
@@ -126,7 +126,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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  version: '0'
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  requirements: []
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  rubyforge_project:
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- rubygems_version: 2.7.7
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+ rubygems_version: 2.6.14
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  signing_key:
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  specification_version: 4
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  summary: Bacterial Annotator