bacterial-annotator 0.8.5 → 0.8.6
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +5 -5
- data/bin/ba_blat +4 -12
- metadata +3 -3
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
|
-
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
2
|
+
SHA1:
|
3
|
+
metadata.gz: dc2f69e483c0756ebfabea8c0badf0058b2e1e2a
|
4
|
+
data.tar.gz: 0c4b2aeb231be810881677a791608515e8cfbad2
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: d14c312a87bd7a3b49e360bd22804b1d42145ef7c948542fb7ae49d40a4a042d906d9ccd86975af703406ebf327b6c1d19e3324c4231475a2a80411ec4e61dac
|
7
|
+
data.tar.gz: d28eaae667a9d2c3ce77c77e0b2b05ec65ff87081a10082fbf328cb32545cd90e582634682b8bed9143812412971b01b568443b897b6b23df3be91eabc7a9a82
|
data/bin/ba_blat
CHANGED
@@ -22,7 +22,6 @@ def installBlat
|
|
22
22
|
file.write(resp.body)
|
23
23
|
end
|
24
24
|
end
|
25
|
-
|
26
25
|
File.chmod(0755, "#{ROOT_path}/blat.linux")
|
27
26
|
rescue
|
28
27
|
abort "Problem installing Blat, aborting"
|
@@ -41,18 +40,11 @@ if ! File.exists? "#{ROOT_path}/blat.linux"
|
|
41
40
|
puts "available on the Kent Informatics website (http://www.kentinformatics.com/)."
|
42
41
|
puts "See http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/"
|
43
42
|
puts ""
|
44
|
-
puts "
|
43
|
+
puts "By using bacterial-annotator you explicitly accept the license."
|
45
44
|
|
46
|
-
|
47
|
-
|
48
|
-
|
49
|
-
puts "OK you accepted the licence let's install the blat binary"
|
50
|
-
installBlat
|
51
|
-
puts "Blat successfully installed : OK"
|
52
|
-
puts ""
|
53
|
-
else
|
54
|
-
puts "Sorry bacterial-annotator rely on blat for the alignment !"
|
55
|
-
end
|
45
|
+
installBlat
|
46
|
+
puts "Blat successfully installed : OK"
|
47
|
+
puts ""
|
56
48
|
|
57
49
|
end
|
58
50
|
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: bacterial-annotator
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.8.
|
4
|
+
version: 0.8.6
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Maxime Deraspe
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2018-07-
|
11
|
+
date: 2018-07-31 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bio
|
@@ -126,7 +126,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
126
126
|
version: '0'
|
127
127
|
requirements: []
|
128
128
|
rubyforge_project:
|
129
|
-
rubygems_version: 2.
|
129
|
+
rubygems_version: 2.6.14
|
130
130
|
signing_key:
|
131
131
|
specification_version: 4
|
132
132
|
summary: Bacterial Annotator
|