bacterial-annotator 0.5.5 → 0.5.6

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 8ab5e91d3ae7a0f2f62ca3ea90de6e84b0686130
-  data.tar.gz: c0df480e3019afc0d152e25134f3b73a2a57c970
+  metadata.gz: 88abe4fa7d11fe6afe5719a8fd91b512dc0f3b2c
+  data.tar.gz: 4cc2535a8aa6cc65cee81500cd7683cb3d06fb9c
 SHA512:
-  metadata.gz: bea8cc8a8a8ffc3ccda0a2dc222046be507d8fba2e95a17ee84e93330b974584e5562658f8cfd8e512384ba615b40800258628588d0f3b5ed34af3aa587f398d
-  data.tar.gz: 26b0cbeff8c9142c6585bd73ff03fbafeb0cb8be953a846b2ed6ffdad80e355cf78cdeb131ac91624e85bf83e9a6cda049eb5a6983e5ff36c91c5d47ad4209f2
+  metadata.gz: f263ec699bf5c7996c1dab3703eaa76abab0637b0edd6a3653a9382b93200d002095f10c7ef17c16ec727910616f20afeb20da5075341469b37862aaa38477a2
+  data.tar.gz: 5b5e56947ec630d095a89cf9628aef046d4d0443673bf6d627d1616fe9c647557797ff9cee31516b348fd029b6075b1a0fd2ec831d445e76c2d12b966a25654c

data/lib/bacterial-annotator/sequence-synteny.rb

@@ -75,6 +75,8 @@ class SequenceSynteny
           # hit = lA[1].chomp.split("|")[3]
           hit = lA[1]
           feature = "cds"
+          # decrease min. % identity for foreign proteins
+          @pidentity = 60.0
         end
 
         # compute coverage based on sequences length

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: bacterial-annotator
 version: !ruby/object:Gem::Version
-  version: 0.5.5
+  version: 0.5.6
 platform: ruby
 authors:
 - Maxime Deraspe
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2017-06-08 00:00:00.000000000 Z
+date: 2017-07-12 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bio