aws-sdk-omics 1.1.0 → 1.2.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +5 -0
- data/VERSION +1 -1
- data/lib/aws-sdk-omics/client.rb +40 -35
- data/lib/aws-sdk-omics/client_api.rb +3 -1
- data/lib/aws-sdk-omics/endpoint_parameters.rb +0 -3
- data/lib/aws-sdk-omics/endpoint_provider.rb +27 -24
- data/lib/aws-sdk-omics/types.rb +31 -22
- data/lib/aws-sdk-omics.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
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---
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2
2
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SHA256:
|
3
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-
metadata.gz:
|
4
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-
data.tar.gz:
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3
|
+
metadata.gz: 0b0791e4b602ac2269a7790f89b7a057987123d5a11cd08f2749166e933481d1
|
4
|
+
data.tar.gz: 39083baf75b0bd58f22573df3c181989060335576a09e085efd02fbf1997c972
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 2a8a6efece95aa42c7bb7c7370a13c82925c808d60d7b8077170901965dcd6baac0e68dabf39736b968cd79fa74f2ca3d3b461b895b4b77cffe54a09bd374a46
|
7
|
+
data.tar.gz: 904f47cb3fb751a21a52c4dd521ee63c60c5f2567aff9b2fbbbac8b115a285c5f730ac5fdd65f6293b159b9f167c378e4704c414854ba913a8bb97eed4fe655e
|
data/CHANGELOG.md
CHANGED
data/VERSION
CHANGED
@@ -1 +1 @@
|
|
1
|
-
1.
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1
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+
1.2.0
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data/lib/aws-sdk-omics/client.rb
CHANGED
@@ -523,7 +523,7 @@ module Aws::Omics
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|
523
523
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# },
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# schema: [
|
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# {
|
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-
# "
|
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+
# "SchemaItemKeyString" => "LONG", # accepts LONG, INT, STRING, FLOAT, DOUBLE, BOOLEAN
|
527
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# },
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# ],
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# },
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@@ -546,7 +546,7 @@ module Aws::Omics
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# resp.store_options.tsv_store_options.format_to_header["FormatToHeaderKey"] #=> String
|
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# resp.store_options.tsv_store_options.schema #=> Array
|
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# resp.store_options.tsv_store_options.schema[0] #=> Hash
|
549
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-
# resp.store_options.tsv_store_options.schema[0]["
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549
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+
# resp.store_options.tsv_store_options.schema[0]["SchemaItemKeyString"] #=> String, one of "LONG", "INT", "STRING", "FLOAT", "DOUBLE", "BOOLEAN"
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#
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# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateAnnotationStore AWS API Documentation
|
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#
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@@ -624,7 +624,7 @@ module Aws::Omics
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# The maximum number of CPUs to use in the group.
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#
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# @option params [Integer] :max_duration
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-
# A
|
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+
# A maximum run time for the group in minutes.
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#
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# @option params [Integer] :max_runs
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# The maximum number of concurrent runs for the group.
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@@ -633,7 +633,8 @@ module Aws::Omics
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# A name for the group.
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#
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# @option params [required, String] :request_id
|
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-
#
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+
# To ensure that requests don't run multiple times, specify a unique ID
|
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+
# for each request.
|
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#
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# **A suitable default value is auto-generated.** You should normally
|
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# not need to pass this option.**
|
@@ -820,13 +821,14 @@ module Aws::Omics
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# A parameter template for the workflow.
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#
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# @option params [required, String] :request_id
|
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-
#
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+
# To ensure that requests don't run multiple times, specify a unique ID
|
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+
# for each request.
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#
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# **A suitable default value is auto-generated.** You should normally
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# not need to pass this option.**
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#
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# @option params [Integer] :storage_capacity
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-
# A storage capacity for the workflow.
|
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+
# A storage capacity for the workflow in gigabytes.
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#
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# @option params [Hash<String,String>] :tags
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# Tags for the workflow.
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@@ -864,7 +866,7 @@ module Aws::Omics
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#
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# resp.arn #=> String
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# resp.id #=> String
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-
# resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED"
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+
# resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
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# resp.tags #=> Hash
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# resp.tags["TagKey"] #=> String
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#
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@@ -1120,11 +1122,11 @@ module Aws::Omics
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# resp.format_options.vcf_options.ignore_qual_field #=> Boolean
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# resp.id #=> String
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# resp.items #=> Array
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-
# resp.items[0].job_status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED"
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+
# resp.items[0].job_status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED", "COMPLETED_WITH_FAILURES"
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# resp.items[0].source #=> String
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# resp.role_arn #=> String
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# resp.run_left_normalization #=> Boolean
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-
# resp.status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED"
|
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+
# resp.status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED", "COMPLETED_WITH_FAILURES"
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# resp.status_message #=> String
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# resp.update_time #=> Time
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#
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@@ -1188,7 +1190,7 @@ module Aws::Omics
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# resp.store_options.tsv_store_options.format_to_header["FormatToHeaderKey"] #=> String
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# resp.store_options.tsv_store_options.schema #=> Array
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# resp.store_options.tsv_store_options.schema[0] #=> Hash
|
1191
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-
# resp.store_options.tsv_store_options.schema[0]["
|
1193
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+
# resp.store_options.tsv_store_options.schema[0]["SchemaItemKeyString"] #=> String, one of "LONG", "INT", "STRING", "FLOAT", "DOUBLE", "BOOLEAN"
|
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# resp.store_size_bytes #=> Integer
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# resp.tags #=> Hash
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# resp.tags["TagKey"] #=> String
|
@@ -1748,7 +1750,7 @@ module Aws::Omics
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# resp.tags #=> Hash
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# resp.tags["TagKey"] #=> String
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# resp.workflow_id #=> String
|
1751
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-
# resp.workflow_type #=> String, one of "PRIVATE"
|
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+
# resp.workflow_type #=> String, one of "PRIVATE", "SERVICE"
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#
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#
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# The following waiters are defined for this operation (see {Client#wait_until} for detailed usage):
|
@@ -1934,11 +1936,12 @@ module Aws::Omics
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# resp.destination_name #=> String
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# resp.id #=> String
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# resp.items #=> Array
|
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-
# resp.items[0].job_status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED"
|
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+
# resp.items[0].job_status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED", "COMPLETED_WITH_FAILURES"
|
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# resp.items[0].source #=> String
|
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+
# resp.items[0].status_message #=> String
|
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# resp.role_arn #=> String
|
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# resp.run_left_normalization #=> Boolean
|
1941
|
-
# resp.status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED"
|
1944
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+
# resp.status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED", "COMPLETED_WITH_FAILURES"
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# resp.status_message #=> String
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# resp.update_time #=> Time
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#
|
@@ -2048,7 +2051,7 @@ module Aws::Omics
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# resp = client.get_workflow({
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# export: ["DEFINITION"], # accepts DEFINITION
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# id: "WorkflowId", # required
|
2051
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-
# type: "PRIVATE", # accepts PRIVATE
|
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+
# type: "PRIVATE", # accepts PRIVATE, SERVICE
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# })
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2053
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#
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2054
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# @example Response structure
|
@@ -2065,12 +2068,12 @@ module Aws::Omics
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# resp.parameter_template #=> Hash
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# resp.parameter_template["WorkflowParameterName"].description #=> String
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# resp.parameter_template["WorkflowParameterName"].optional #=> Boolean
|
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-
# resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED"
|
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+
# resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
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# resp.status_message #=> String
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# resp.storage_capacity #=> Integer
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# resp.tags #=> Hash
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# resp.tags["TagKey"] #=> String
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-
# resp.type #=> String, one of "PRIVATE"
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+
# resp.type #=> String, one of "PRIVATE", "SERVICE"
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#
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#
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# The following waiters are defined for this operation (see {Client#wait_until} for detailed usage):
|
@@ -2112,7 +2115,7 @@ module Aws::Omics
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#
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# resp = client.list_annotation_import_jobs({
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# filter: {
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-
# status: "SUBMITTED", # accepts SUBMITTED, IN_PROGRESS, CANCELLED, COMPLETED, FAILED
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+
# status: "SUBMITTED", # accepts SUBMITTED, IN_PROGRESS, CANCELLED, COMPLETED, FAILED, COMPLETED_WITH_FAILURES
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# store_name: "String",
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# },
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# ids: ["ResourceIdentifier"],
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@@ -2129,7 +2132,7 @@ module Aws::Omics
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# resp.annotation_import_jobs[0].id #=> String
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# resp.annotation_import_jobs[0].role_arn #=> String
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# resp.annotation_import_jobs[0].run_left_normalization #=> Boolean
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-
# resp.annotation_import_jobs[0].status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED"
|
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+
# resp.annotation_import_jobs[0].status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED", "COMPLETED_WITH_FAILURES"
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# resp.annotation_import_jobs[0].update_time #=> Time
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# resp.next_token #=> String
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#
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@@ -2862,7 +2865,7 @@ module Aws::Omics
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#
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# resp = client.list_variant_import_jobs({
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# filter: {
|
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-
# status: "SUBMITTED", # accepts SUBMITTED, IN_PROGRESS, CANCELLED, COMPLETED, FAILED
|
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+
# status: "SUBMITTED", # accepts SUBMITTED, IN_PROGRESS, CANCELLED, COMPLETED, FAILED, COMPLETED_WITH_FAILURES
|
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# store_name: "String",
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# },
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# ids: ["ResourceIdentifier"],
|
@@ -2880,7 +2883,7 @@ module Aws::Omics
|
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# resp.variant_import_jobs[0].id #=> String
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# resp.variant_import_jobs[0].role_arn #=> String
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# resp.variant_import_jobs[0].run_left_normalization #=> Boolean
|
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-
# resp.variant_import_jobs[0].status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED"
|
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+
# resp.variant_import_jobs[0].status #=> String, one of "SUBMITTED", "IN_PROGRESS", "CANCELLED", "COMPLETED", "FAILED", "COMPLETED_WITH_FAILURES"
|
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# resp.variant_import_jobs[0].update_time #=> Time
|
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#
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# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListVariantImportJobs AWS API Documentation
|
@@ -2979,7 +2982,7 @@ module Aws::Omics
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# max_results: 1,
|
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# name: "WorkflowName",
|
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# starting_token: "WorkflowListToken",
|
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-
# type: "PRIVATE", # accepts PRIVATE
|
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+
# type: "PRIVATE", # accepts PRIVATE, SERVICE
|
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# })
|
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#
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# @example Response structure
|
@@ -2990,8 +2993,8 @@ module Aws::Omics
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# resp.items[0].digest #=> String
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# resp.items[0].id #=> String
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# resp.items[0].name #=> String
|
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-
# resp.items[0].status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED"
|
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-
# resp.items[0].type #=> String, one of "PRIVATE"
|
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+
# resp.items[0].status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
|
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+
# resp.items[0].type #=> String, one of "PRIVATE", "SERVICE"
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# resp.next_token #=> String
|
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#
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# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListWorkflows AWS API Documentation
|
@@ -3069,7 +3072,8 @@ module Aws::Omics
|
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req.send_request(options)
|
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end
|
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|
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-
#
|
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+
# Activates an archived read set. To reduce storage charges, Amazon
|
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# Omics archives unused read sets after 30 days.
|
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#
|
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# @option params [String] :client_token
|
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# To ensure that jobs don't run multiple times, specify a unique token
|
@@ -3079,7 +3083,7 @@ module Aws::Omics
|
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# The read set's sequence store ID.
|
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#
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# @option params [required, Array<Types::StartReadSetActivationJobSourceItem>] :sources
|
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-
# The job's
|
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+
# The job's source files.
|
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#
|
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# @return [Types::StartReadSetActivationJobResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
|
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#
|
@@ -3116,7 +3120,7 @@ module Aws::Omics
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req.send_request(options)
|
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|
end
|
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|
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-
#
|
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+
# Exports a read set to Amazon S3.
|
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#
|
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# @option params [String] :client_token
|
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# To ensure that jobs don't run multiple times, specify a unique token
|
@@ -3132,7 +3136,7 @@ module Aws::Omics
|
|
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# The read set's sequence store ID.
|
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#
|
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# @option params [required, Array<Types::ExportReadSet>] :sources
|
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-
#
|
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+
# The job's source files.
|
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|
#
|
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# @return [Types::StartReadSetExportJobResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
|
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#
|
@@ -3186,7 +3190,7 @@ module Aws::Omics
|
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# The read set's sequence store ID.
|
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#
|
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# @option params [required, Array<Types::StartReadSetImportJobSourceItem>] :sources
|
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|
-
#
|
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|
+
# The job's source files.
|
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|
#
|
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|
# @return [Types::StartReadSetImportJobResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
|
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|
#
|
@@ -3252,7 +3256,7 @@ module Aws::Omics
|
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|
# A service role for the job.
|
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|
#
|
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|
# @option params [required, Array<Types::StartReferenceImportJobSourceItem>] :sources
|
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|
-
#
|
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|
+
# The job's source files.
|
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|
#
|
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|
# @return [Types::StartReferenceImportJobResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
|
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|
#
|
@@ -3320,7 +3324,8 @@ module Aws::Omics
|
|
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|
# A priority for the run.
|
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|
#
|
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|
# @option params [required, String] :request_id
|
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|
-
#
|
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|
+
# To ensure that requests don't run multiple times, specify a unique ID
|
3328
|
+
# for each request.
|
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|
#
|
3325
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|
# **A suitable default value is auto-generated.** You should normally
|
3326
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|
# not need to pass this option.**
|
@@ -3335,7 +3340,7 @@ module Aws::Omics
|
|
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|
# The run's ID.
|
3336
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|
#
|
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|
# @option params [Integer] :storage_capacity
|
3338
|
-
# A storage capacity for the run.
|
3343
|
+
# A storage capacity for the run in gigabytes.
|
3339
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|
#
|
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|
# @option params [Hash<String,String>] :tags
|
3341
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|
# Tags for the run.
|
@@ -3371,7 +3376,7 @@ module Aws::Omics
|
|
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|
# "TagKey" => "TagValue",
|
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|
# },
|
3373
3378
|
# workflow_id: "WorkflowId",
|
3374
|
-
# workflow_type: "PRIVATE", # accepts PRIVATE
|
3379
|
+
# workflow_type: "PRIVATE", # accepts PRIVATE, SERVICE
|
3375
3380
|
# })
|
3376
3381
|
#
|
3377
3382
|
# @example Response structure
|
@@ -3530,7 +3535,7 @@ module Aws::Omics
|
|
3530
3535
|
# resp.store_options.tsv_store_options.format_to_header["FormatToHeaderKey"] #=> String
|
3531
3536
|
# resp.store_options.tsv_store_options.schema #=> Array
|
3532
3537
|
# resp.store_options.tsv_store_options.schema[0] #=> Hash
|
3533
|
-
# resp.store_options.tsv_store_options.schema[0]["
|
3538
|
+
# resp.store_options.tsv_store_options.schema[0]["SchemaItemKeyString"] #=> String, one of "LONG", "INT", "STRING", "FLOAT", "DOUBLE", "BOOLEAN"
|
3534
3539
|
# resp.update_time #=> Time
|
3535
3540
|
#
|
3536
3541
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateAnnotationStore AWS API Documentation
|
@@ -3551,7 +3556,7 @@ module Aws::Omics
|
|
3551
3556
|
# The maximum number of CPUs to use.
|
3552
3557
|
#
|
3553
3558
|
# @option params [Integer] :max_duration
|
3554
|
-
#
|
3559
|
+
# A maximum run time for the group in minutes.
|
3555
3560
|
#
|
3556
3561
|
# @option params [Integer] :max_runs
|
3557
3562
|
# The maximum number of concurrent runs for the group.
|
@@ -3667,7 +3672,7 @@ module Aws::Omics
|
|
3667
3672
|
params: params,
|
3668
3673
|
config: config)
|
3669
3674
|
context[:gem_name] = 'aws-sdk-omics'
|
3670
|
-
context[:gem_version] = '1.
|
3675
|
+
context[:gem_version] = '1.2.0'
|
3671
3676
|
Seahorse::Client::Request.new(handlers, context)
|
3672
3677
|
end
|
3673
3678
|
|
@@ -314,6 +314,7 @@ module Aws::Omics
|
|
314
314
|
S3Uri = Shapes::StringShape.new(name: 'S3Uri')
|
315
315
|
SampleId = Shapes::StringShape.new(name: 'SampleId')
|
316
316
|
SchemaItem = Shapes::MapShape.new(name: 'SchemaItem')
|
317
|
+
SchemaItemKeyString = Shapes::StringShape.new(name: 'SchemaItemKeyString')
|
317
318
|
SchemaValueType = Shapes::StringShape.new(name: 'SchemaValueType')
|
318
319
|
Separator = Shapes::StringShape.new(name: 'Separator')
|
319
320
|
SequenceInformation = Shapes::StructureShape.new(name: 'SequenceInformation')
|
@@ -1343,7 +1344,7 @@ module Aws::Omics
|
|
1343
1344
|
RunResourceDigests.key = Shapes::ShapeRef.new(shape: RunResourceDigestKey)
|
1344
1345
|
RunResourceDigests.value = Shapes::ShapeRef.new(shape: RunResourceDigest)
|
1345
1346
|
|
1346
|
-
SchemaItem.key = Shapes::ShapeRef.new(shape:
|
1347
|
+
SchemaItem.key = Shapes::ShapeRef.new(shape: SchemaItemKeyString)
|
1347
1348
|
SchemaItem.value = Shapes::ShapeRef.new(shape: SchemaValueType)
|
1348
1349
|
|
1349
1350
|
SequenceInformation.add_member(:alignment, Shapes::ShapeRef.new(shape: String, location_name: "alignment"))
|
@@ -1593,6 +1594,7 @@ module Aws::Omics
|
|
1593
1594
|
|
1594
1595
|
VariantImportItemDetail.add_member(:job_status, Shapes::ShapeRef.new(shape: JobStatus, required: true, location_name: "jobStatus"))
|
1595
1596
|
VariantImportItemDetail.add_member(:source, Shapes::ShapeRef.new(shape: S3Uri, required: true, location_name: "source"))
|
1597
|
+
VariantImportItemDetail.add_member(:status_message, Shapes::ShapeRef.new(shape: JobStatusMsg, location_name: "statusMessage"))
|
1596
1598
|
VariantImportItemDetail.struct_class = Types::VariantImportItemDetail
|
1597
1599
|
|
1598
1600
|
VariantImportItemDetails.member = Shapes::ShapeRef.new(shape: VariantImportItemDetail)
|
@@ -50,9 +50,6 @@ module Aws::Omics
|
|
50
50
|
|
51
51
|
def initialize(options = {})
|
52
52
|
self[:region] = options[:region]
|
53
|
-
if self[:region].nil?
|
54
|
-
raise ArgumentError, "Missing required EndpointParameter: :region"
|
55
|
-
end
|
56
53
|
self[:use_dual_stack] = options[:use_dual_stack]
|
57
54
|
self[:use_dual_stack] = false if self[:use_dual_stack].nil?
|
58
55
|
if self[:use_dual_stack].nil?
|
@@ -14,36 +14,39 @@ module Aws::Omics
|
|
14
14
|
use_dual_stack = parameters.use_dual_stack
|
15
15
|
use_fips = parameters.use_fips
|
16
16
|
endpoint = parameters.endpoint
|
17
|
-
if
|
18
|
-
if Aws::Endpoints::Matchers.set?(endpoint) && (url = Aws::Endpoints::Matchers.parse_url(endpoint))
|
19
|
-
if Aws::Endpoints::Matchers.boolean_equals?(use_fips, true)
|
20
|
-
raise ArgumentError, "Invalid Configuration: FIPS and custom endpoint are not supported"
|
21
|
-
end
|
22
|
-
if Aws::Endpoints::Matchers.boolean_equals?(use_dual_stack, true)
|
23
|
-
raise ArgumentError, "Invalid Configuration: Dualstack and custom endpoint are not supported"
|
24
|
-
end
|
25
|
-
return Aws::Endpoints::Endpoint.new(url: endpoint, headers: {}, properties: {})
|
26
|
-
end
|
27
|
-
if Aws::Endpoints::Matchers.boolean_equals?(use_fips, true) && Aws::Endpoints::Matchers.boolean_equals?(use_dual_stack, true)
|
28
|
-
if Aws::Endpoints::Matchers.boolean_equals?(true, Aws::Endpoints::Matchers.attr(partition_result, "supportsFIPS")) && Aws::Endpoints::Matchers.boolean_equals?(true, Aws::Endpoints::Matchers.attr(partition_result, "supportsDualStack"))
|
29
|
-
return Aws::Endpoints::Endpoint.new(url: "https://omics-fips.#{region}.#{partition_result['dualStackDnsSuffix']}", headers: {}, properties: {})
|
30
|
-
end
|
31
|
-
raise ArgumentError, "FIPS and DualStack are enabled, but this partition does not support one or both"
|
32
|
-
end
|
17
|
+
if Aws::Endpoints::Matchers.set?(endpoint)
|
33
18
|
if Aws::Endpoints::Matchers.boolean_equals?(use_fips, true)
|
34
|
-
|
35
|
-
return Aws::Endpoints::Endpoint.new(url: "https://omics-fips.#{region}.#{partition_result['dnsSuffix']}", headers: {}, properties: {})
|
36
|
-
end
|
37
|
-
raise ArgumentError, "FIPS is enabled but this partition does not support FIPS"
|
19
|
+
raise ArgumentError, "Invalid Configuration: FIPS and custom endpoint are not supported"
|
38
20
|
end
|
39
21
|
if Aws::Endpoints::Matchers.boolean_equals?(use_dual_stack, true)
|
40
|
-
|
41
|
-
|
22
|
+
raise ArgumentError, "Invalid Configuration: Dualstack and custom endpoint are not supported"
|
23
|
+
end
|
24
|
+
return Aws::Endpoints::Endpoint.new(url: endpoint, headers: {}, properties: {})
|
25
|
+
end
|
26
|
+
if Aws::Endpoints::Matchers.set?(region)
|
27
|
+
if (partition_result = Aws::Endpoints::Matchers.aws_partition(region))
|
28
|
+
if Aws::Endpoints::Matchers.boolean_equals?(use_fips, true) && Aws::Endpoints::Matchers.boolean_equals?(use_dual_stack, true)
|
29
|
+
if Aws::Endpoints::Matchers.boolean_equals?(true, Aws::Endpoints::Matchers.attr(partition_result, "supportsFIPS")) && Aws::Endpoints::Matchers.boolean_equals?(true, Aws::Endpoints::Matchers.attr(partition_result, "supportsDualStack"))
|
30
|
+
return Aws::Endpoints::Endpoint.new(url: "https://omics-fips.#{region}.#{partition_result['dualStackDnsSuffix']}", headers: {}, properties: {})
|
31
|
+
end
|
32
|
+
raise ArgumentError, "FIPS and DualStack are enabled, but this partition does not support one or both"
|
33
|
+
end
|
34
|
+
if Aws::Endpoints::Matchers.boolean_equals?(use_fips, true)
|
35
|
+
if Aws::Endpoints::Matchers.boolean_equals?(true, Aws::Endpoints::Matchers.attr(partition_result, "supportsFIPS"))
|
36
|
+
return Aws::Endpoints::Endpoint.new(url: "https://omics-fips.#{region}.#{partition_result['dnsSuffix']}", headers: {}, properties: {})
|
37
|
+
end
|
38
|
+
raise ArgumentError, "FIPS is enabled but this partition does not support FIPS"
|
39
|
+
end
|
40
|
+
if Aws::Endpoints::Matchers.boolean_equals?(use_dual_stack, true)
|
41
|
+
if Aws::Endpoints::Matchers.boolean_equals?(true, Aws::Endpoints::Matchers.attr(partition_result, "supportsDualStack"))
|
42
|
+
return Aws::Endpoints::Endpoint.new(url: "https://omics.#{region}.#{partition_result['dualStackDnsSuffix']}", headers: {}, properties: {})
|
43
|
+
end
|
44
|
+
raise ArgumentError, "DualStack is enabled but this partition does not support DualStack"
|
42
45
|
end
|
43
|
-
|
46
|
+
return Aws::Endpoints::Endpoint.new(url: "https://omics.#{region}.#{partition_result['dnsSuffix']}", headers: {}, properties: {})
|
44
47
|
end
|
45
|
-
return Aws::Endpoints::Endpoint.new(url: "https://omics.#{region}.#{partition_result['dnsSuffix']}", headers: {}, properties: {})
|
46
48
|
end
|
49
|
+
raise ArgumentError, "Invalid Configuration: Missing Region"
|
47
50
|
raise ArgumentError, 'No endpoint could be resolved'
|
48
51
|
|
49
52
|
end
|
data/lib/aws-sdk-omics/types.rb
CHANGED
@@ -398,7 +398,8 @@ module Aws::Omics
|
|
398
398
|
# @return [String]
|
399
399
|
#
|
400
400
|
# @!attribute [rw] reference
|
401
|
-
# The store's genome reference.
|
401
|
+
# The store's genome reference. Required for all stores except TSV
|
402
|
+
# format with generic annotations.
|
402
403
|
# @return [Types::ReferenceItem]
|
403
404
|
#
|
404
405
|
# @!attribute [rw] status
|
@@ -502,7 +503,7 @@ module Aws::Omics
|
|
502
503
|
# @return [Integer]
|
503
504
|
#
|
504
505
|
# @!attribute [rw] max_duration
|
505
|
-
# A
|
506
|
+
# A maximum run time for the group in minutes.
|
506
507
|
# @return [Integer]
|
507
508
|
#
|
508
509
|
# @!attribute [rw] max_runs
|
@@ -514,7 +515,8 @@ module Aws::Omics
|
|
514
515
|
# @return [String]
|
515
516
|
#
|
516
517
|
# @!attribute [rw] request_id
|
517
|
-
#
|
518
|
+
# To ensure that requests don't run multiple times, specify a unique
|
519
|
+
# ID for each request.
|
518
520
|
#
|
519
521
|
# **A suitable default value is auto-generated.** You should normally
|
520
522
|
# not need to pass this option.
|
@@ -722,14 +724,15 @@ module Aws::Omics
|
|
722
724
|
# @return [Hash<String,Types::WorkflowParameter>]
|
723
725
|
#
|
724
726
|
# @!attribute [rw] request_id
|
725
|
-
#
|
727
|
+
# To ensure that requests don't run multiple times, specify a unique
|
728
|
+
# ID for each request.
|
726
729
|
#
|
727
730
|
# **A suitable default value is auto-generated.** You should normally
|
728
731
|
# not need to pass this option.
|
729
732
|
# @return [String]
|
730
733
|
#
|
731
734
|
# @!attribute [rw] storage_capacity
|
732
|
-
# A storage capacity for the workflow.
|
735
|
+
# A storage capacity for the workflow in gigabytes.
|
733
736
|
# @return [Integer]
|
734
737
|
#
|
735
738
|
# @!attribute [rw] tags
|
@@ -1278,7 +1281,7 @@ module Aws::Omics
|
|
1278
1281
|
# @return [String]
|
1279
1282
|
#
|
1280
1283
|
# @!attribute [rw] sources
|
1281
|
-
# The job's
|
1284
|
+
# The job's source files.
|
1282
1285
|
# @return [Array<Types::ActivateReadSetSourceItem>]
|
1283
1286
|
#
|
1284
1287
|
# @!attribute [rw] status
|
@@ -1405,7 +1408,7 @@ module Aws::Omics
|
|
1405
1408
|
# @return [String]
|
1406
1409
|
#
|
1407
1410
|
# @!attribute [rw] sources
|
1408
|
-
# The job's
|
1411
|
+
# The job's source files.
|
1409
1412
|
# @return [Array<Types::ImportReadSetSourceItem>]
|
1410
1413
|
#
|
1411
1414
|
# @!attribute [rw] status
|
@@ -1597,7 +1600,7 @@ module Aws::Omics
|
|
1597
1600
|
# @return [String]
|
1598
1601
|
#
|
1599
1602
|
# @!attribute [rw] sources
|
1600
|
-
# The job's
|
1603
|
+
# The job's source files.
|
1601
1604
|
# @return [Array<Types::ImportReferenceSourceItem>]
|
1602
1605
|
#
|
1603
1606
|
# @!attribute [rw] status
|
@@ -1819,7 +1822,7 @@ module Aws::Omics
|
|
1819
1822
|
# @return [Integer]
|
1820
1823
|
#
|
1821
1824
|
# @!attribute [rw] max_duration
|
1822
|
-
# The group's maximum run
|
1825
|
+
# The group's maximum run time in minutes.
|
1823
1826
|
# @return [Integer]
|
1824
1827
|
#
|
1825
1828
|
# @!attribute [rw] max_runs
|
@@ -1943,7 +1946,7 @@ module Aws::Omics
|
|
1943
1946
|
# @return [Time]
|
1944
1947
|
#
|
1945
1948
|
# @!attribute [rw] storage_capacity
|
1946
|
-
# The run's storage capacity.
|
1949
|
+
# The run's storage capacity in gigabytes.
|
1947
1950
|
# @return [Integer]
|
1948
1951
|
#
|
1949
1952
|
# @!attribute [rw] tags
|
@@ -2018,7 +2021,7 @@ module Aws::Omics
|
|
2018
2021
|
# @return [String]
|
2019
2022
|
#
|
2020
2023
|
# @!attribute [rw] memory
|
2021
|
-
# The task's memory
|
2024
|
+
# The task's memory use in gigabytes.
|
2022
2025
|
# @return [Integer]
|
2023
2026
|
#
|
2024
2027
|
# @!attribute [rw] name
|
@@ -2330,7 +2333,7 @@ module Aws::Omics
|
|
2330
2333
|
# @return [String]
|
2331
2334
|
#
|
2332
2335
|
# @!attribute [rw] storage_capacity
|
2333
|
-
# The workflow's storage capacity.
|
2336
|
+
# The workflow's storage capacity in gigabytes.
|
2334
2337
|
# @return [Integer]
|
2335
2338
|
#
|
2336
2339
|
# @!attribute [rw] tags
|
@@ -3853,7 +3856,7 @@ module Aws::Omics
|
|
3853
3856
|
# @return [Integer]
|
3854
3857
|
#
|
3855
3858
|
# @!attribute [rw] max_duration
|
3856
|
-
# The group's maximum duration setting.
|
3859
|
+
# The group's maximum duration setting in minutes.
|
3857
3860
|
# @return [Integer]
|
3858
3861
|
#
|
3859
3862
|
# @!attribute [rw] max_runs
|
@@ -4134,7 +4137,7 @@ module Aws::Omics
|
|
4134
4137
|
# @return [String]
|
4135
4138
|
#
|
4136
4139
|
# @!attribute [rw] sources
|
4137
|
-
# The job's
|
4140
|
+
# The job's source files.
|
4138
4141
|
# @return [Array<Types::StartReadSetActivationJobSourceItem>]
|
4139
4142
|
#
|
4140
4143
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/StartReadSetActivationJobRequest AWS API Documentation
|
@@ -4206,7 +4209,7 @@ module Aws::Omics
|
|
4206
4209
|
# @return [String]
|
4207
4210
|
#
|
4208
4211
|
# @!attribute [rw] sources
|
4209
|
-
#
|
4212
|
+
# The job's source files.
|
4210
4213
|
# @return [Array<Types::ExportReadSet>]
|
4211
4214
|
#
|
4212
4215
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/StartReadSetExportJobRequest AWS API Documentation
|
@@ -4267,7 +4270,7 @@ module Aws::Omics
|
|
4267
4270
|
# @return [String]
|
4268
4271
|
#
|
4269
4272
|
# @!attribute [rw] sources
|
4270
|
-
#
|
4273
|
+
# The job's source files.
|
4271
4274
|
# @return [Array<Types::StartReadSetImportJobSourceItem>]
|
4272
4275
|
#
|
4273
4276
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/StartReadSetImportJobRequest AWS API Documentation
|
@@ -4381,7 +4384,7 @@ module Aws::Omics
|
|
4381
4384
|
# @return [String]
|
4382
4385
|
#
|
4383
4386
|
# @!attribute [rw] sources
|
4384
|
-
#
|
4387
|
+
# The job's source files.
|
4385
4388
|
# @return [Array<Types::StartReferenceImportJobSourceItem>]
|
4386
4389
|
#
|
4387
4390
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/StartReferenceImportJobRequest AWS API Documentation
|
@@ -4477,7 +4480,8 @@ module Aws::Omics
|
|
4477
4480
|
# @return [Integer]
|
4478
4481
|
#
|
4479
4482
|
# @!attribute [rw] request_id
|
4480
|
-
#
|
4483
|
+
# To ensure that requests don't run multiple times, specify a unique
|
4484
|
+
# ID for each request.
|
4481
4485
|
#
|
4482
4486
|
# **A suitable default value is auto-generated.** You should normally
|
4483
4487
|
# not need to pass this option.
|
@@ -4496,7 +4500,7 @@ module Aws::Omics
|
|
4496
4500
|
# @return [String]
|
4497
4501
|
#
|
4498
4502
|
# @!attribute [rw] storage_capacity
|
4499
|
-
# A storage capacity for the run.
|
4503
|
+
# A storage capacity for the run in gigabytes.
|
4500
4504
|
# @return [Integer]
|
4501
4505
|
#
|
4502
4506
|
# @!attribute [rw] tags
|
@@ -4652,7 +4656,7 @@ module Aws::Omics
|
|
4652
4656
|
# @return [Time]
|
4653
4657
|
#
|
4654
4658
|
# @!attribute [rw] memory
|
4655
|
-
# The task's memory.
|
4659
|
+
# The task's memory use in gigabyes.
|
4656
4660
|
# @return [Integer]
|
4657
4661
|
#
|
4658
4662
|
# @!attribute [rw] name
|
@@ -4840,7 +4844,7 @@ module Aws::Omics
|
|
4840
4844
|
# @return [Integer]
|
4841
4845
|
#
|
4842
4846
|
# @!attribute [rw] max_duration
|
4843
|
-
#
|
4847
|
+
# A maximum run time for the group in minutes.
|
4844
4848
|
# @return [Integer]
|
4845
4849
|
#
|
4846
4850
|
# @!attribute [rw] max_runs
|
@@ -4968,11 +4972,16 @@ module Aws::Omics
|
|
4968
4972
|
# The source file's location in Amazon S3.
|
4969
4973
|
# @return [String]
|
4970
4974
|
#
|
4975
|
+
# @!attribute [rw] status_message
|
4976
|
+
# A message that provides additional context about a job
|
4977
|
+
# @return [String]
|
4978
|
+
#
|
4971
4979
|
# @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/VariantImportItemDetail AWS API Documentation
|
4972
4980
|
#
|
4973
4981
|
class VariantImportItemDetail < Struct.new(
|
4974
4982
|
:job_status,
|
4975
|
-
:source
|
4983
|
+
:source,
|
4984
|
+
:status_message)
|
4976
4985
|
SENSITIVE = []
|
4977
4986
|
include Aws::Structure
|
4978
4987
|
end
|
data/lib/aws-sdk-omics.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: aws-sdk-omics
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.
|
4
|
+
version: 1.2.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Amazon Web Services
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2023-
|
11
|
+
date: 2023-02-28 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: aws-sdk-core
|