aws-sdk-omics 1.43.0 → 1.45.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -7,34 +7,34 @@
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  #
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  # WARNING ABOUT GENERATED CODE
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- require 'seahorse/client/plugins/content_length.rb'
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- require 'aws-sdk-core/plugins/credentials_configuration.rb'
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- require 'aws-sdk-core/plugins/logging.rb'
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- require 'aws-sdk-core/plugins/param_converter.rb'
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- require 'aws-sdk-core/plugins/param_validator.rb'
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- require 'aws-sdk-core/plugins/user_agent.rb'
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- require 'aws-sdk-core/plugins/helpful_socket_errors.rb'
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- require 'aws-sdk-core/plugins/retry_errors.rb'
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- require 'aws-sdk-core/plugins/global_configuration.rb'
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- require 'aws-sdk-core/plugins/regional_endpoint.rb'
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- require 'aws-sdk-core/plugins/endpoint_discovery.rb'
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- require 'aws-sdk-core/plugins/endpoint_pattern.rb'
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- require 'aws-sdk-core/plugins/response_paging.rb'
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- require 'aws-sdk-core/plugins/stub_responses.rb'
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- require 'aws-sdk-core/plugins/idempotency_token.rb'
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- require 'aws-sdk-core/plugins/invocation_id.rb'
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- require 'aws-sdk-core/plugins/jsonvalue_converter.rb'
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- require 'aws-sdk-core/plugins/client_metrics_plugin.rb'
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- require 'aws-sdk-core/plugins/client_metrics_send_plugin.rb'
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- require 'aws-sdk-core/plugins/transfer_encoding.rb'
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- require 'aws-sdk-core/plugins/http_checksum.rb'
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- require 'aws-sdk-core/plugins/checksum_algorithm.rb'
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- require 'aws-sdk-core/plugins/request_compression.rb'
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- require 'aws-sdk-core/plugins/defaults_mode.rb'
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- require 'aws-sdk-core/plugins/recursion_detection.rb'
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- require 'aws-sdk-core/plugins/telemetry.rb'
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- require 'aws-sdk-core/plugins/sign.rb'
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- require 'aws-sdk-core/plugins/protocols/rest_json.rb'
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+ require 'seahorse/client/plugins/content_length'
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+ require 'aws-sdk-core/plugins/credentials_configuration'
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+ require 'aws-sdk-core/plugins/logging'
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+ require 'aws-sdk-core/plugins/param_converter'
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+ require 'aws-sdk-core/plugins/param_validator'
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+ require 'aws-sdk-core/plugins/user_agent'
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+ require 'aws-sdk-core/plugins/helpful_socket_errors'
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+ require 'aws-sdk-core/plugins/retry_errors'
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+ require 'aws-sdk-core/plugins/global_configuration'
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+ require 'aws-sdk-core/plugins/regional_endpoint'
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+ require 'aws-sdk-core/plugins/endpoint_discovery'
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+ require 'aws-sdk-core/plugins/endpoint_pattern'
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+ require 'aws-sdk-core/plugins/response_paging'
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+ require 'aws-sdk-core/plugins/stub_responses'
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+ require 'aws-sdk-core/plugins/idempotency_token'
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+ require 'aws-sdk-core/plugins/invocation_id'
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+ require 'aws-sdk-core/plugins/jsonvalue_converter'
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+ require 'aws-sdk-core/plugins/client_metrics_plugin'
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+ require 'aws-sdk-core/plugins/client_metrics_send_plugin'
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+ require 'aws-sdk-core/plugins/transfer_encoding'
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+ require 'aws-sdk-core/plugins/http_checksum'
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+ require 'aws-sdk-core/plugins/checksum_algorithm'
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+ require 'aws-sdk-core/plugins/request_compression'
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+ require 'aws-sdk-core/plugins/defaults_mode'
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+ require 'aws-sdk-core/plugins/recursion_detection'
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+ require 'aws-sdk-core/plugins/telemetry'
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+ require 'aws-sdk-core/plugins/sign'
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+ require 'aws-sdk-core/plugins/protocols/rest_json'
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  module Aws::Omics
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  # An API client for Omics. To construct a client, you need to configure a `:region` and `:credentials`.
@@ -993,12 +993,12 @@ module Aws::Omics
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  # You can create a run cache to save the task outputs from completed
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  # tasks in a run for a private workflow. Subsequent runs use the task
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  # outputs from the cache, rather than computing the task outputs again.
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- # You specify an Amazon S3 location where HealthOmics saves the cached
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- # data. This data must be immediately accessible (not in an archived
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- # state).
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+ # You specify an Amazon S3 location where Amazon Web Services
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+ # HealthOmics saves the cached data. This data must be immediately
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+ # accessible (not in an archived state).
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  #
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- # For more information, see [Creating a run cache][1] in the AWS
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- # HealthOmics User Guide.
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+ # For more information, see [Creating a run cache][1] in the Amazon Web
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+ # Services HealthOmics User Guide.
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  #
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  #
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  #
@@ -1023,8 +1023,8 @@ module Aws::Omics
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  # CACHE\_ON\_FAILURE. When you start a run that uses this cache, you can
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  # override the default cache behavior.
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  #
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- # For more information, see [Run cache behavior][1] in the AWS
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- # HealthOmics User Guide.
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+ # For more information, see [Run cache behavior][1] in the Amazon Web
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+ # Services HealthOmics User Guide.
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  #
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  #
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  #
@@ -1042,8 +1042,8 @@ module Aws::Omics
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  #
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  # @option params [required, String] :request_id
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  # A unique request token, to ensure idempotency. If you don't specify a
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- # token, HealthOmics automatically generates a universally unique
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- # identifier (UUID) for the request.
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+ # token, Amazon Web Services HealthOmics automatically generates a
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+ # universally unique identifier (UUID) for the request.
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  #
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  # **A suitable default value is auto-generated.** You should normally
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  # not need to pass this option.**
@@ -1052,9 +1052,9 @@ module Aws::Omics
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  # Specify one or more tags to associate with this run cache.
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  #
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  # @option params [String] :cache_bucket_owner_id
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- # The AWS account ID of the expected owner of the S3 bucket for the run
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- # cache. If not provided, your account ID is set as the owner of the
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- # bucket.
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+ # The Amazon Web Services account ID of the expected owner of the S3
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+ # bucket for the run cache. If not provided, your account ID is set as
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+ # the owner of the bucket.
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  #
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  # @return [Types::CreateRunCacheResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
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  #
@@ -1224,7 +1224,7 @@ module Aws::Omics
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  # "TagKey" => "TagValue",
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  # },
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  # client_token: "ClientToken",
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- # fallback_location: "S3Destination",
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+ # fallback_location: "FallbackLocation",
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  # e_tag_algorithm_family: "MD5up", # accepts MD5up, SHA256up, SHA512up
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  # propagated_set_level_tags: ["TagKey"],
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  # s3_access_config: {
@@ -1370,7 +1370,35 @@ module Aws::Omics
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  req.send_request(options)
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  end
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- # Creates a workflow.
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+ # Creates a private workflow.Private workflows depend on a variety of
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+ # resources that you create and configure before creating the workflow:
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+ #
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+ # * *Input data*: Input data for the workflow, stored in an S3 bucket or
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+ # a Amazon Web Services HealthOmics sequence store.
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+ #
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+ # * *Workflow definition files*: Define your workflow in one or more
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+ # workflow definition files, written in WDL, Nextflow, or CWL. The
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+ # workflow definition specifies the inputs and outputs for runs that
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+ # use the workflow. It also includes specifications for the runs and
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+ # run tasks for your workflow, including compute and memory
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+ # requirements.
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+ #
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+ # * *Parameter template files*: Define run parameters using a parameter
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+ # template file (written in JSON).
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+ #
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+ # * *ECR container images*: Create one or more container images for the
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+ # workflow. Store the images in a private ECR repository.
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+ #
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+ # * (Optional) *Sentieon licenses*: Request a Sentieon license if you
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+ # plan to use Sentieon software in a private workflow.
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+ #
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+ # For more information, see [Creating or updating a private workflow in
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+ # Amazon Web Services HealthOmics][1] in the Amazon Web Services
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+ # HealthOmics User Guide.
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+ #
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+ #
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+ #
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+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/creating-private-workflows.html
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  #
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  # @option params [String] :name
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  # A name for the workflow.
@@ -1379,7 +1407,7 @@ module Aws::Omics
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  # A description for the workflow.
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  #
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  # @option params [String] :engine
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- # An engine for the workflow.
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+ # The workflow engine for the workflow.
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  #
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  # @option params [String, StringIO, File] :definition_zip
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  # A ZIP archive for the workflow.
@@ -1394,7 +1422,8 @@ module Aws::Omics
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  # A parameter template for the workflow.
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  #
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  # @option params [Integer] :storage_capacity
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- # The default storage capacity for the workflow runs, in gibibytes.
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+ # The default static storage capacity (in gibibytes) for runs that use
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+ # this workflow or workflow version.
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  #
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  # @option params [Hash<String,String>] :tags
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  # Tags for the workflow.
@@ -1409,12 +1438,25 @@ module Aws::Omics
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  # @option params [String] :accelerators
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  # The computational accelerator specified to run the workflow.
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  #
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+ # @option params [String] :storage_type
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+ # The default storage type for runs that use this workflow. STATIC
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+ # storage allocates a fixed amount of storage. DYNAMIC storage
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+ # dynamically scales the storage up or down, based on file system
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+ # utilization. For more information about static and dynamic storage,
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+ # see [Running workflows][1] in the *Amazon Web Services HealthOmics
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+ # User Guide*.
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+ #
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+ #
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+ #
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+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html
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+ #
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  # @return [Types::CreateWorkflowResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
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  #
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  # * {Types::CreateWorkflowResponse#arn #arn} => String
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  # * {Types::CreateWorkflowResponse#id #id} => String
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  # * {Types::CreateWorkflowResponse#status #status} => String
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  # * {Types::CreateWorkflowResponse#tags #tags} => Hash&lt;String,String&gt;
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+ # * {Types::CreateWorkflowResponse#uuid #uuid} => String
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  #
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  # @example Request syntax with placeholder values
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  #
@@ -1437,6 +1479,7 @@ module Aws::Omics
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  # },
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  # request_id: "WorkflowRequestId", # required
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  # accelerators: "GPU", # accepts GPU
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+ # storage_type: "STATIC", # accepts STATIC, DYNAMIC
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  # })
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  #
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  # @example Response structure
@@ -1446,6 +1489,7 @@ module Aws::Omics
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  # resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
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  # resp.tags #=> Hash
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  # resp.tags["TagKey"] #=> String
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+ # resp.uuid #=> String
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  #
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  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateWorkflow AWS API Documentation
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  #
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  req.send_request(options)
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  end
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+ # Creates a new workflow version for the workflow that you specify with
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+ # the `workflowId` parameter.
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+ #
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+ # When you create a new version of a workflow, you need to specify the
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+ # configuration for the new version. It doesn't inherit any
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+ # configuration values from the workflow.
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+ #
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+ # Provide a version name that is unique for this workflow. You cannot
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+ # change the name after HealthOmics creates the version.
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+ #
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+ # <note markdown="1"> Don’t include any personally identifiable information (PII) in the
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+ # version name. Version names appear in the workflow version ARN.
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+ #
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+ # </note>
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+ #
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+ # For more information, see [Workflow versioning in Amazon Web Services
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+ # HealthOmics][1] in the Amazon Web Services HealthOmics User Guide.
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+ #
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+ #
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+ #
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+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/workflow-versions.html
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+ #
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+ # @option params [required, String] :workflow_id
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+ # The ID of the workflow where you are creating the new version.
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+ #
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+ # @option params [required, String] :version_name
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+ # A name for the workflow version. Provide a version name that is unique
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+ # for this workflow. You cannot change the name after HealthOmics
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+ # creates the version.
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+ #
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+ # The version name must start with a letter or number and it can include
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+ # upper-case and lower-case letters, numbers, hyphens, periods and
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+ # underscores. The maximum length is 64 characters. You can use a simple
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+ # naming scheme, such as version1, version2, version3. You can also
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+ # match your workflow versions with your own internal versioning
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+ # conventions, such as 2.7.0, 2.7.1, 2.7.2.
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+ #
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+ # @option params [String, StringIO, File] :definition_zip
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+ # A zip archive containing the workflow definition for this workflow
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+ # version.
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+ #
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+ # @option params [String] :definition_uri
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+ # The URI specifies the location of the workflow definition for this
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+ # workflow version.
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+ #
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+ # @option params [String] :accelerators
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+ # The computational accelerator for this workflow version.
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+ #
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+ # @option params [String] :description
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+ # A description for this workflow version.
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+ #
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+ # @option params [String] :engine
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+ # The workflow engine for this workflow version.
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+ #
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+ # @option params [String] :main
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+ # The path of the main definition file for this workflow version.
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+ #
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+ # @option params [Hash<String,Types::WorkflowParameter>] :parameter_template
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+ # The parameter template defines the input parameters for runs that use
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+ # this workflow version.
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+ #
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+ # @option params [required, String] :request_id
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+ # To ensure that requests don't run multiple times, specify a unique ID
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+ # for each request.
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+ #
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+ # **A suitable default value is auto-generated.** You should normally
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+ # not need to pass this option.**
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+ #
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+ # @option params [String] :storage_type
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+ # The default storage type for runs that use this workflow. STATIC
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+ # storage allocates a fixed amount of storage. DYNAMIC storage
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+ # dynamically scales the storage up or down, based on file system
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+ # utilization. For more information about static and dynamic storage,
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+ # see [Running workflows][1] in the *Amazon Web Services HealthOmics
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+ # User Guide*.
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+ #
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+ #
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+ #
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+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html
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+ #
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+ # @option params [Integer] :storage_capacity
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+ # The default static storage capacity (in gibibytes) for runs that use
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+ # this workflow or workflow version.
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+ #
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+ # @option params [Hash<String,String>] :tags
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+ # Optional tags to associate with this workflow version.
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+ #
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+ # @option params [String] :workflow_bucket_owner_id
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+ # Amazon Web Services Id of the owner of the S3 bucket that contains the
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+ # workflow definition. You need to specify this parameter if your
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+ # account is not the bucket owner.
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+ #
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+ # @return [Types::CreateWorkflowVersionResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
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+ #
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+ # * {Types::CreateWorkflowVersionResponse#arn #arn} => String
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+ # * {Types::CreateWorkflowVersionResponse#workflow_id #workflow_id} => String
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+ # * {Types::CreateWorkflowVersionResponse#version_name #version_name} => String
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+ # * {Types::CreateWorkflowVersionResponse#status #status} => String
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+ # * {Types::CreateWorkflowVersionResponse#tags #tags} => Hash&lt;String,String&gt;
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+ # * {Types::CreateWorkflowVersionResponse#uuid #uuid} => String
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+ #
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+ # @example Request syntax with placeholder values
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+ #
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+ # resp = client.create_workflow_version({
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+ # workflow_id: "WorkflowId", # required
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+ # version_name: "WorkflowVersionName", # required
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+ # definition_zip: "data",
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+ # definition_uri: "WorkflowDefinition",
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+ # accelerators: "GPU", # accepts GPU
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+ # description: "WorkflowVersionDescription",
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+ # engine: "WDL", # accepts WDL, NEXTFLOW, CWL
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+ # main: "WorkflowMain",
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+ # parameter_template: {
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+ # "WorkflowParameterName" => {
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+ # description: "WorkflowParameterDescription",
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+ # optional: false,
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+ # },
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+ # },
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+ # request_id: "WorkflowRequestId", # required
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+ # storage_type: "STATIC", # accepts STATIC, DYNAMIC
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+ # storage_capacity: 1,
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+ # tags: {
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+ # "TagKey" => "TagValue",
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+ # },
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+ # workflow_bucket_owner_id: "WorkflowBucketOwnerId",
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+ # })
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+ #
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+ # @example Response structure
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+ #
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+ # resp.arn #=> String
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+ # resp.workflow_id #=> String
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+ # resp.version_name #=> String
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+ # resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
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+ # resp.tags #=> Hash
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+ # resp.tags["TagKey"] #=> String
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+ # resp.uuid #=> String
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+ #
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+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateWorkflowVersion AWS API Documentation
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+ #
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+ # @overload create_workflow_version(params = {})
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+ # @param [Hash] params ({})
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+ def create_workflow_version(params = {}, options = {})
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+ req = build_request(:create_workflow_version, params)
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+ req.send_request(options)
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+ end
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+
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  # Deletes an annotation store.
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  #
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  # @option params [required, String] :name
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  # troubleshoot issues. You can remove old cache data using standard S3
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  # `Delete` operations.
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  #
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- # For more information, see [Deleting a run cache][1] in the AWS
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- # HealthOmics User Guide.
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+ # For more information, see [Deleting a run cache][1] in the Amazon Web
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+ # Services HealthOmics User Guide.
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  #
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  #
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  #
@@ -1781,6 +1971,40 @@ module Aws::Omics
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  req.send_request(options)
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  end
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+ # Deletes a workflow version. Deleting a workflow version doesn't
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+ # affect any ongoing runs that are using the workflow version.
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+ #
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+ # For more information, see [Workflow versioning in Amazon Web Services
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+ # HealthOmics][1] in the Amazon Web Services HealthOmics User Guide.
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+ #
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+ #
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+ #
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+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/workflow-versions.html
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+ #
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+ # @option params [required, String] :workflow_id
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+ # The workflow's ID.
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+ #
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+ # @option params [required, String] :version_name
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+ # The workflow version name.
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+ #
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+ # @return [Struct] Returns an empty {Seahorse::Client::Response response}.
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+ #
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+ # @example Request syntax with placeholder values
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+ #
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+ # resp = client.delete_workflow_version({
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+ # workflow_id: "WorkflowId", # required
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+ # version_name: "WorkflowVersionName", # required
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+ # })
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+ #
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+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/DeleteWorkflowVersion AWS API Documentation
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+ #
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+ # @overload delete_workflow_version(params = {})
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+ # @param [Hash] params ({})
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+ def delete_workflow_version(params = {}, options = {})
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+ req = build_request(:delete_workflow_version, params)
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+ req.send_request(options)
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+ end
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+
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  # Gets information about an annotation import job.
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  #
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  # @option params [required, String] :job_id
@@ -2489,11 +2713,11 @@ module Aws::Omics
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  # If a workflow is shared with you, you cannot export information about
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  # the run.
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  #
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- # HealthOmics stores a fixed number of runs that are available to the
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- # console and API. If GetRun doesn't return the requested run, you can
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- # find run logs for all runs in the CloudWatch logs. For more
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- # information about viewing the run logs, see [CloudWatch logs][1] in
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- # the *AWS HealthOmics User Guide*.
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+ # Amazon Web Services HealthOmics stores a fixed number of runs that are
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+ # available to the console and API. If GetRun doesn't return the
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+ # requested run, you can find run logs for all runs in the CloudWatch
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+ # logs. For more information about viewing the run logs, see [CloudWatch
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+ # logs][1] in the *in the Amazon Web Services HealthOmics User Guide*.
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  #
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  #
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  #
@@ -2541,6 +2765,8 @@ module Aws::Omics
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  # * {Types::GetRunResponse#run_output_uri #run_output_uri} => String
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  # * {Types::GetRunResponse#storage_type #storage_type} => String
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  # * {Types::GetRunResponse#workflow_owner_id #workflow_owner_id} => String
2768
+ # * {Types::GetRunResponse#workflow_version_name #workflow_version_name} => String
2769
+ # * {Types::GetRunResponse#workflow_uuid #workflow_uuid} => String
2544
2770
  #
2545
2771
  # @example Request syntax with placeholder values
2546
2772
  #
@@ -2587,6 +2813,8 @@ module Aws::Omics
2587
2813
  # resp.run_output_uri #=> String
2588
2814
  # resp.storage_type #=> String, one of "STATIC", "DYNAMIC"
2589
2815
  # resp.workflow_owner_id #=> String
2816
+ # resp.workflow_version_name #=> String
2817
+ # resp.workflow_uuid #=> String
2590
2818
  #
2591
2819
  #
2592
2820
  # The following waiters are defined for this operation (see {Client#wait_until} for detailed usage):
@@ -2605,8 +2833,9 @@ module Aws::Omics
2605
2833
 
2606
2834
  # Retrieve the details for the specified run cache.
2607
2835
  #
2608
- # For more information, see [Call caching for HealthOmics runs][1] in
2609
- # the AWS HealthOmics User Guide.
2836
+ # For more information, see [Call caching for Amazon Web Services
2837
+ # HealthOmics runs][1] in the Amazon Web Services HealthOmics User
2838
+ # Guide.
2610
2839
  #
2611
2840
  #
2612
2841
  #
@@ -3047,6 +3276,8 @@ module Aws::Omics
3047
3276
  # * {Types::GetWorkflowResponse#tags #tags} => Hash&lt;String,String&gt;
3048
3277
  # * {Types::GetWorkflowResponse#metadata #metadata} => Hash&lt;String,String&gt;
3049
3278
  # * {Types::GetWorkflowResponse#accelerators #accelerators} => String
3279
+ # * {Types::GetWorkflowResponse#storage_type #storage_type} => String
3280
+ # * {Types::GetWorkflowResponse#uuid #uuid} => String
3050
3281
  #
3051
3282
  # @example Request syntax with placeholder values
3052
3283
  #
@@ -3080,6 +3311,8 @@ module Aws::Omics
3080
3311
  # resp.metadata #=> Hash
3081
3312
  # resp.metadata["WorkflowMetadataKey"] #=> String
3082
3313
  # resp.accelerators #=> String, one of "GPU"
3314
+ # resp.storage_type #=> String, one of "STATIC", "DYNAMIC"
3315
+ # resp.uuid #=> String
3083
3316
  #
3084
3317
  #
3085
3318
  # The following waiters are defined for this operation (see {Client#wait_until} for detailed usage):
@@ -3095,6 +3328,103 @@ module Aws::Omics
3095
3328
  req.send_request(options)
3096
3329
  end
3097
3330
 
3331
+ # Gets information about a workflow version. For more information, see
3332
+ # [Workflow versioning in Amazon Web Services HealthOmics][1] in the
3333
+ # Amazon Web Services HealthOmics User Guide.
3334
+ #
3335
+ #
3336
+ #
3337
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/workflow-versions.html
3338
+ #
3339
+ # @option params [required, String] :workflow_id
3340
+ # The workflow's ID.
3341
+ #
3342
+ # @option params [required, String] :version_name
3343
+ # The workflow version name.
3344
+ #
3345
+ # @option params [String] :type
3346
+ # The workflow's type.
3347
+ #
3348
+ # @option params [Array<String>] :export
3349
+ # The export format for the workflow.
3350
+ #
3351
+ # @option params [String] :workflow_owner_id
3352
+ # Amazon Web Services Id of the owner of the workflow.
3353
+ #
3354
+ # @return [Types::GetWorkflowVersionResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
3355
+ #
3356
+ # * {Types::GetWorkflowVersionResponse#arn #arn} => String
3357
+ # * {Types::GetWorkflowVersionResponse#workflow_id #workflow_id} => String
3358
+ # * {Types::GetWorkflowVersionResponse#version_name #version_name} => String
3359
+ # * {Types::GetWorkflowVersionResponse#accelerators #accelerators} => String
3360
+ # * {Types::GetWorkflowVersionResponse#creation_time #creation_time} => Time
3361
+ # * {Types::GetWorkflowVersionResponse#description #description} => String
3362
+ # * {Types::GetWorkflowVersionResponse#definition #definition} => String
3363
+ # * {Types::GetWorkflowVersionResponse#digest #digest} => String
3364
+ # * {Types::GetWorkflowVersionResponse#engine #engine} => String
3365
+ # * {Types::GetWorkflowVersionResponse#main #main} => String
3366
+ # * {Types::GetWorkflowVersionResponse#metadata #metadata} => Hash&lt;String,String&gt;
3367
+ # * {Types::GetWorkflowVersionResponse#parameter_template #parameter_template} => Hash&lt;String,Types::WorkflowParameter&gt;
3368
+ # * {Types::GetWorkflowVersionResponse#status #status} => String
3369
+ # * {Types::GetWorkflowVersionResponse#status_message #status_message} => String
3370
+ # * {Types::GetWorkflowVersionResponse#storage_type #storage_type} => String
3371
+ # * {Types::GetWorkflowVersionResponse#storage_capacity #storage_capacity} => Integer
3372
+ # * {Types::GetWorkflowVersionResponse#type #type} => String
3373
+ # * {Types::GetWorkflowVersionResponse#tags #tags} => Hash&lt;String,String&gt;
3374
+ # * {Types::GetWorkflowVersionResponse#uuid #uuid} => String
3375
+ # * {Types::GetWorkflowVersionResponse#workflow_bucket_owner_id #workflow_bucket_owner_id} => String
3376
+ #
3377
+ # @example Request syntax with placeholder values
3378
+ #
3379
+ # resp = client.get_workflow_version({
3380
+ # workflow_id: "WorkflowId", # required
3381
+ # version_name: "WorkflowVersionName", # required
3382
+ # type: "PRIVATE", # accepts PRIVATE, READY2RUN
3383
+ # export: ["DEFINITION"], # accepts DEFINITION
3384
+ # workflow_owner_id: "WorkflowOwnerId",
3385
+ # })
3386
+ #
3387
+ # @example Response structure
3388
+ #
3389
+ # resp.arn #=> String
3390
+ # resp.workflow_id #=> String
3391
+ # resp.version_name #=> String
3392
+ # resp.accelerators #=> String, one of "GPU"
3393
+ # resp.creation_time #=> Time
3394
+ # resp.description #=> String
3395
+ # resp.definition #=> String
3396
+ # resp.digest #=> String
3397
+ # resp.engine #=> String, one of "WDL", "NEXTFLOW", "CWL"
3398
+ # resp.main #=> String
3399
+ # resp.metadata #=> Hash
3400
+ # resp.metadata["WorkflowMetadataKey"] #=> String
3401
+ # resp.parameter_template #=> Hash
3402
+ # resp.parameter_template["WorkflowParameterName"].description #=> String
3403
+ # resp.parameter_template["WorkflowParameterName"].optional #=> Boolean
3404
+ # resp.status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
3405
+ # resp.status_message #=> String
3406
+ # resp.storage_type #=> String, one of "STATIC", "DYNAMIC"
3407
+ # resp.storage_capacity #=> Integer
3408
+ # resp.type #=> String, one of "PRIVATE", "READY2RUN"
3409
+ # resp.tags #=> Hash
3410
+ # resp.tags["TagKey"] #=> String
3411
+ # resp.uuid #=> String
3412
+ # resp.workflow_bucket_owner_id #=> String
3413
+ #
3414
+ #
3415
+ # The following waiters are defined for this operation (see {Client#wait_until} for detailed usage):
3416
+ #
3417
+ # * workflow_version_active
3418
+ #
3419
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetWorkflowVersion AWS API Documentation
3420
+ #
3421
+ # @overload get_workflow_version(params = {})
3422
+ # @param [Hash] params ({})
3423
+ def get_workflow_version(params = {}, options = {})
3424
+ req = build_request(:get_workflow_version, params)
3425
+ req.send_request(options)
3426
+ end
3427
+
3098
3428
  # Retrieves a list of annotation import jobs.
3099
3429
  #
3100
3430
  # @option params [Integer] :max_results
@@ -3952,11 +4282,12 @@ module Aws::Omics
3952
4282
 
3953
4283
  # Retrieves a list of runs.
3954
4284
  #
3955
- # HealthOmics stores a fixed number of runs that are available to the
3956
- # console and API. If the ListRuns response doesn't include specific
3957
- # runs that you expected, you can find run logs for all runs in the
3958
- # CloudWatch logs. For more information about viewing the run logs, see
3959
- # [CloudWatch logs][1] in the *AWS HealthOmics User Guide*.
4285
+ # Amazon Web Services HealthOmics stores a fixed number of runs that are
4286
+ # available to the console and API. If the ListRuns response doesn't
4287
+ # include specific runs that you expected, you can find run logs for all
4288
+ # runs in the CloudWatch logs. For more information about viewing the
4289
+ # run logs, see [CloudWatch logs][1] in the *Amazon Web Services
4290
+ # HealthOmics User Guide*.
3960
4291
  #
3961
4292
  #
3962
4293
  #
@@ -4009,6 +4340,7 @@ module Aws::Omics
4009
4340
  # resp.items[0].start_time #=> Time
4010
4341
  # resp.items[0].stop_time #=> Time
4011
4342
  # resp.items[0].storage_type #=> String, one of "STATIC", "DYNAMIC"
4343
+ # resp.items[0].workflow_version_name #=> String
4012
4344
  # resp.next_token #=> String
4013
4345
  #
4014
4346
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListRuns AWS API Documentation
@@ -4288,6 +4620,71 @@ module Aws::Omics
4288
4620
  req.send_request(options)
4289
4621
  end
4290
4622
 
4623
+ # Lists the workflow versions for the specified workflow. For more
4624
+ # information, see [Workflow versioning in Amazon Web Services
4625
+ # HealthOmics][1] in the Amazon Web Services HealthOmics User Guide.
4626
+ #
4627
+ #
4628
+ #
4629
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/workflow-versions.html
4630
+ #
4631
+ # @option params [required, String] :workflow_id
4632
+ # The workflow's ID.
4633
+ #
4634
+ # @option params [String] :type
4635
+ # The workflow type.
4636
+ #
4637
+ # @option params [String] :workflow_owner_id
4638
+ # Amazon Web Services Id of the owner of the workflow.
4639
+ #
4640
+ # @option params [String] :starting_token
4641
+ # Specify the pagination token from a previous request to retrieve the
4642
+ # next page of results.
4643
+ #
4644
+ # @option params [Integer] :max_results
4645
+ # The maximum number of workflows to return in one page of results.
4646
+ #
4647
+ # @return [Types::ListWorkflowVersionsResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
4648
+ #
4649
+ # * {Types::ListWorkflowVersionsResponse#items #items} => Array&lt;Types::WorkflowVersionListItem&gt;
4650
+ # * {Types::ListWorkflowVersionsResponse#next_token #next_token} => String
4651
+ #
4652
+ # The returned {Seahorse::Client::Response response} is a pageable response and is Enumerable. For details on usage see {Aws::PageableResponse PageableResponse}.
4653
+ #
4654
+ # @example Request syntax with placeholder values
4655
+ #
4656
+ # resp = client.list_workflow_versions({
4657
+ # workflow_id: "WorkflowId", # required
4658
+ # type: "PRIVATE", # accepts PRIVATE, READY2RUN
4659
+ # workflow_owner_id: "WorkflowOwnerId",
4660
+ # starting_token: "WorkflowVersionListToken",
4661
+ # max_results: 1,
4662
+ # })
4663
+ #
4664
+ # @example Response structure
4665
+ #
4666
+ # resp.items #=> Array
4667
+ # resp.items[0].arn #=> String
4668
+ # resp.items[0].workflow_id #=> String
4669
+ # resp.items[0].version_name #=> String
4670
+ # resp.items[0].description #=> String
4671
+ # resp.items[0].status #=> String, one of "CREATING", "ACTIVE", "UPDATING", "DELETED", "FAILED", "INACTIVE"
4672
+ # resp.items[0].type #=> String, one of "PRIVATE", "READY2RUN"
4673
+ # resp.items[0].digest #=> String
4674
+ # resp.items[0].creation_time #=> Time
4675
+ # resp.items[0].metadata #=> Hash
4676
+ # resp.items[0].metadata["WorkflowMetadataKey"] #=> String
4677
+ # resp.next_token #=> String
4678
+ #
4679
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListWorkflowVersions AWS API Documentation
4680
+ #
4681
+ # @overload list_workflow_versions(params = {})
4682
+ # @param [Hash] params ({})
4683
+ def list_workflow_versions(params = {}, options = {})
4684
+ req = build_request(:list_workflow_versions, params)
4685
+ req.send_request(options)
4686
+ end
4687
+
4291
4688
  # Retrieves a list of workflows.
4292
4689
  #
4293
4690
  # @option params [String] :type
@@ -4687,28 +5084,22 @@ module Aws::Omics
4687
5084
  req.send_request(options)
4688
5085
  end
4689
5086
 
4690
- # Starts a workflow run. To duplicate a run, specify the run's ID and a
4691
- # role ARN. The remaining parameters are copied from the previous run.
4692
- #
4693
- # StartRun will not support re-run for a workflow that is shared with
4694
- # you.
4695
- #
4696
- # HealthOmics stores a fixed number of runs that are available to the
4697
- # console and API. By default, HealthOmics doesn't any remove any runs.
4698
- # If HealthOmics reaches the maximum number of runs, you must manually
4699
- # remove runs. To have older runs removed automatically, set the
4700
- # retention mode to `REMOVE`.
4701
- #
4702
- # By default, the run uses STATIC storage. For STATIC storage, set the
4703
- # `storageCapacity` field. You can set the storage type to DYNAMIC. You
4704
- # do not set `storageCapacity`, because HealthOmics dynamically scales
4705
- # the storage up or down as required. For more information about static
4706
- # and dynamic storage, see [Running workflows][1] in the *AWS
5087
+ # Starts a new run or duplicates an existing run.
5088
+ #
5089
+ # For a new run, specify a unique `requestId`, the `workflowId`, and a
5090
+ # role ARN. If you're using static run storage (the default), specify
5091
+ # the required `storageCapacity`.
5092
+ #
5093
+ # You duplicate a run by specifing a unique `requestId`, the `runID` of
5094
+ # the run to duplicate, and a role ARN.
5095
+ #
5096
+ # For more information about the optional parameters in the StartRun
5097
+ # request, see [Starting a run][1] in the *Amazon Web Services
4707
5098
  # HealthOmics User Guide*.
4708
5099
  #
4709
5100
  #
4710
5101
  #
4711
- # [1]: https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html
5102
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/starting-a-run.html
4712
5103
  #
4713
5104
  # @option params [String] :workflow_id
4714
5105
  # The run's workflow ID.
@@ -4733,7 +5124,7 @@ module Aws::Omics
4733
5124
  # The cache behavior for the run. You specify this value if you want to
4734
5125
  # override the default behavior for the cache. You had set the default
4735
5126
  # value when you created the cache. For more information, see [Run cache
4736
- # behavior][1] in the AWS HealthOmics User Guide.
5127
+ # behavior][1] in the Amazon Web Services HealthOmics User Guide.
4737
5128
  #
4738
5129
  #
4739
5130
  #
@@ -4754,9 +5145,9 @@ module Aws::Omics
4754
5145
  # additional encoding or escaping.
4755
5146
  #
4756
5147
  # @option params [Integer] :storage_capacity
4757
- # A storage capacity for the run in gibibytes. This field is not
4758
- # required if the storage type is dynamic (the system ignores any value
4759
- # that you enter).
5148
+ # The static storage capacity (in gibibytes) for this run. This field is
5149
+ # not required if the storage type is dynamic (the system ignores any
5150
+ # value that you enter).
4760
5151
  #
4761
5152
  # @option params [String] :output_uri
4762
5153
  # An output URI for the run.
@@ -4777,30 +5168,41 @@ module Aws::Omics
4777
5168
  # @option params [String] :retention_mode
4778
5169
  # The retention mode for the run. The default value is RETAIN.
4779
5170
  #
4780
- # HealthOmics stores a fixed number of runs that are available to the
4781
- # console and API. In the default mode (RETAIN), you need to remove runs
4782
- # manually when the number of run exceeds the maximum. If you set the
4783
- # retention mode to `REMOVE`, HealthOmics automatically removes runs
4784
- # (that have mode set to REMOVE) when the number of run exceeds the
4785
- # maximum. All run logs are available in CloudWatch logs, if you need
4786
- # information about a run that is no longer available to the API.
5171
+ # Amazon Web Services HealthOmics stores a fixed number of runs that are
5172
+ # available to the console and API. In the default mode (RETAIN), you
5173
+ # need to remove runs manually when the number of run exceeds the
5174
+ # maximum. If you set the retention mode to `REMOVE`, Amazon Web
5175
+ # Services HealthOmics automatically removes runs (that have mode set to
5176
+ # REMOVE) when the number of run exceeds the maximum. All run logs are
5177
+ # available in CloudWatch logs, if you need information about a run that
5178
+ # is no longer available to the API.
4787
5179
  #
4788
5180
  # For more information about retention mode, see [Specifying run
4789
- # retention mode][1] in the *AWS HealthOmics User Guide*.
5181
+ # retention mode][1] in the *Amazon Web Services HealthOmics User
5182
+ # Guide*.
4790
5183
  #
4791
5184
  #
4792
5185
  #
4793
5186
  # [1]: https://docs.aws.amazon.com/omics/latest/dev/starting-a-run.html
4794
5187
  #
4795
5188
  # @option params [String] :storage_type
4796
- # The run's storage type. By default, the run uses STATIC storage type,
4797
- # which allocates a fixed amount of storage. If you set the storage type
4798
- # to DYNAMIC, HealthOmics dynamically scales the storage up or down,
4799
- # based on file system utilization.
5189
+ # The storage type for the run. By default, the run uses STATIC storage
5190
+ # type, which allocates a fixed amount of storage. If you set the
5191
+ # storage type to DYNAMIC, Amazon Web Services HealthOmics dynamically
5192
+ # scales the storage up or down, based on file system utilization. For
5193
+ # more information about static and dynamic storage, see [Running
5194
+ # workflows][1] in the *Amazon Web Services HealthOmics User Guide*.
5195
+ #
5196
+ #
5197
+ #
5198
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html
4800
5199
  #
4801
5200
  # @option params [String] :workflow_owner_id
4802
5201
  # The ID of the workflow owner.
4803
5202
  #
5203
+ # @option params [String] :workflow_version_name
5204
+ # The name of the workflow version.
5205
+ #
4804
5206
  # @return [Types::StartRunResponse] Returns a {Seahorse::Client::Response response} object which responds to the following methods:
4805
5207
  #
4806
5208
  # * {Types::StartRunResponse#arn #arn} => String
@@ -4834,6 +5236,7 @@ module Aws::Omics
4834
5236
  # retention_mode: "RETAIN", # accepts RETAIN, REMOVE
4835
5237
  # storage_type: "STATIC", # accepts STATIC, DYNAMIC
4836
5238
  # workflow_owner_id: "WorkflowOwnerId",
5239
+ # workflow_version_name: "WorkflowVersionName",
4837
5240
  # })
4838
5241
  #
4839
5242
  # @example Response structure
@@ -5190,7 +5593,7 @@ module Aws::Omics
5190
5593
  # name: "SequenceStoreName",
5191
5594
  # description: "SequenceStoreDescription",
5192
5595
  # client_token: "ClientToken",
5193
- # fallback_location: "S3Destination",
5596
+ # fallback_location: "FallbackLocation",
5194
5597
  # propagated_set_level_tags: ["TagKey"],
5195
5598
  # s3_access_config: {
5196
5599
  # access_log_location: "AccessLogLocation",
@@ -5270,7 +5673,13 @@ module Aws::Omics
5270
5673
  req.send_request(options)
5271
5674
  end
5272
5675
 
5273
- # Updates a workflow.
5676
+ # Updates information about a workflow. For more information, see
5677
+ # [Update a private workflow][1] in the Amazon Web Services HealthOmics
5678
+ # User Guide.
5679
+ #
5680
+ #
5681
+ #
5682
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/update-private-workflow.html
5274
5683
  #
5275
5684
  # @option params [required, String] :id
5276
5685
  # The workflow's ID.
@@ -5281,6 +5690,22 @@ module Aws::Omics
5281
5690
  # @option params [String] :description
5282
5691
  # A description for the workflow.
5283
5692
  #
5693
+ # @option params [String] :storage_type
5694
+ # The default storage type for runs that use this workflow. STATIC
5695
+ # storage allocates a fixed amount of storage. DYNAMIC storage
5696
+ # dynamically scales the storage up or down, based on file system
5697
+ # utilization. For more information about static and dynamic storage,
5698
+ # see [Running workflows][1] in the *Amazon Web Services HealthOmics
5699
+ # User Guide*.
5700
+ #
5701
+ #
5702
+ #
5703
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html
5704
+ #
5705
+ # @option params [Integer] :storage_capacity
5706
+ # The default static storage capacity (in gibibytes) for runs that use
5707
+ # this workflow or workflow version.
5708
+ #
5284
5709
  # @return [Struct] Returns an empty {Seahorse::Client::Response response}.
5285
5710
  #
5286
5711
  # @example Request syntax with placeholder values
@@ -5289,6 +5714,8 @@ module Aws::Omics
5289
5714
  # id: "WorkflowId", # required
5290
5715
  # name: "WorkflowName",
5291
5716
  # description: "WorkflowDescription",
5717
+ # storage_type: "STATIC", # accepts STATIC, DYNAMIC
5718
+ # storage_capacity: 1,
5292
5719
  # })
5293
5720
  #
5294
5721
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateWorkflow AWS API Documentation
@@ -5300,6 +5727,60 @@ module Aws::Omics
5300
5727
  req.send_request(options)
5301
5728
  end
5302
5729
 
5730
+ # Updates information about the workflow version. For more information,
5731
+ # see [Workflow versioning in Amazon Web Services HealthOmics][1] in the
5732
+ # Amazon Web Services HealthOmics User Guide.
5733
+ #
5734
+ #
5735
+ #
5736
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/workflow-versions.html
5737
+ #
5738
+ # @option params [required, String] :workflow_id
5739
+ # The workflow's ID.
5740
+ #
5741
+ # @option params [required, String] :version_name
5742
+ # The name of the workflow version.
5743
+ #
5744
+ # @option params [String] :description
5745
+ # Description of the workflow version.
5746
+ #
5747
+ # @option params [String] :storage_type
5748
+ # The default storage type for runs that use this workflow. STATIC
5749
+ # storage allocates a fixed amount of storage. DYNAMIC storage
5750
+ # dynamically scales the storage up or down, based on file system
5751
+ # utilization. For more information about static and dynamic storage,
5752
+ # see [Running workflows][1] in the *Amazon Web Services HealthOmics
5753
+ # User Guide*.
5754
+ #
5755
+ #
5756
+ #
5757
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html
5758
+ #
5759
+ # @option params [Integer] :storage_capacity
5760
+ # The default static storage capacity (in gibibytes) for runs that use
5761
+ # this workflow or workflow version.
5762
+ #
5763
+ # @return [Struct] Returns an empty {Seahorse::Client::Response response}.
5764
+ #
5765
+ # @example Request syntax with placeholder values
5766
+ #
5767
+ # resp = client.update_workflow_version({
5768
+ # workflow_id: "WorkflowId", # required
5769
+ # version_name: "WorkflowVersionName", # required
5770
+ # description: "WorkflowVersionDescription",
5771
+ # storage_type: "STATIC", # accepts STATIC, DYNAMIC
5772
+ # storage_capacity: 1,
5773
+ # })
5774
+ #
5775
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateWorkflowVersion AWS API Documentation
5776
+ #
5777
+ # @overload update_workflow_version(params = {})
5778
+ # @param [Hash] params ({})
5779
+ def update_workflow_version(params = {}, options = {})
5780
+ req = build_request(:update_workflow_version, params)
5781
+ req.send_request(options)
5782
+ end
5783
+
5303
5784
  # This operation uploads a specific part of a read set. If you upload a
5304
5785
  # new part using a previously used part number, the previously uploaded
5305
5786
  # part will be overwritten.
@@ -5364,7 +5845,7 @@ module Aws::Omics
5364
5845
  tracer: tracer
5365
5846
  )
5366
5847
  context[:gem_name] = 'aws-sdk-omics'
5367
- context[:gem_version] = '1.43.0'
5848
+ context[:gem_version] = '1.45.0'
5368
5849
  Seahorse::Client::Request.new(handlers, context)
5369
5850
  end
5370
5851
 
@@ -5449,6 +5930,7 @@ module Aws::Omics
5449
5930
  # | variant_store_created | {Client#get_variant_store} | 30 | 20 |
5450
5931
  # | variant_store_deleted | {Client#get_variant_store} | 30 | 20 |
5451
5932
  # | workflow_active | {Client#get_workflow} | 3 | 10 |
5933
+ # | workflow_version_active | {Client#get_workflow_version} | 3 | 10 |
5452
5934
  #
5453
5935
  # @raise [Errors::FailureStateError] Raised when the waiter terminates
5454
5936
  # because the waiter has entered a state that it will not transition
@@ -5515,7 +5997,8 @@ module Aws::Omics
5515
5997
  variant_import_job_created: Waiters::VariantImportJobCreated,
5516
5998
  variant_store_created: Waiters::VariantStoreCreated,
5517
5999
  variant_store_deleted: Waiters::VariantStoreDeleted,
5518
- workflow_active: Waiters::WorkflowActive
6000
+ workflow_active: Waiters::WorkflowActive,
6001
+ workflow_version_active: Waiters::WorkflowVersionActive
5519
6002
  }
5520
6003
  end
5521
6004