aws-sdk-omics 1.40.0 → 1.42.0

data/lib/aws-sdk-omics/types.rb

@@ -1083,6 +1083,9 @@ module Aws::Omics
     # @!attribute [rw] client_token
     #   To ensure that requests don't run multiple times, specify a unique
     #   token for each request.
+    #
+    #   **A suitable default value is auto-generated.** You should normally
+    #   not need to pass this option.
     #   @return [String]
     #
     # @!attribute [rw] fallback_location
@@ -1094,6 +1097,15 @@ module Aws::Omics
     #   The ETag algorithm family to use for ingested read sets.
     #   @return [String]
     #
+    # @!attribute [rw] propagated_set_level_tags
+    #   The tags keys to propagate to the S3 objects associated with read
+    #   sets in the sequence store.
+    #   @return [Array<String>]
+    #
+    # @!attribute [rw] s3_access_config
+    #   S3 access configuration parameters
+    #   @return [Types::S3AccessConfig]
+    #
     # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreRequest AWS API Documentation
     #
     class CreateSequenceStoreRequest < Struct.new(
@@ -1103,7 +1115,9 @@ module Aws::Omics
       :tags,
       :client_token,
       :fallback_location,
-      :e_tag_algorithm_family)
+      :e_tag_algorithm_family,
+      :propagated_set_level_tags,
+      :s3_access_config)
       SENSITIVE = []
       include Aws::Structure
     end
@@ -1141,6 +1155,23 @@ module Aws::Omics
     #   The algorithm family of the ETag.
     #   @return [String]
     #
+    # @!attribute [rw] status
+    #   The status of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] status_message
+    #   The status message of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] propagated_set_level_tags
+    #   The tags keys to propagate to the S3 objects associated with read
+    #   sets in the sequence store.
+    #   @return [Array<String>]
+    #
+    # @!attribute [rw] s3_access
+    #   The S3 access metadata of the sequence store.
+    #   @return [Types::SequenceStoreS3Access]
+    #
     # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreResponse AWS API Documentation
     #
     class CreateSequenceStoreResponse < Struct.new(
@@ -1151,7 +1182,11 @@ module Aws::Omics
       :sse_config,
       :creation_time,
       :fallback_location,
-      :e_tag_algorithm_family)
+      :e_tag_algorithm_family,
+      :status,
+      :status_message,
+      :propagated_set_level_tags,
+      :s3_access)
       SENSITIVE = []
       include Aws::Structure
     end
@@ -1497,6 +1532,22 @@ module Aws::Omics
       include Aws::Structure
     end
 
+    # @!attribute [rw] s3_access_point_arn
+    #   The S3 access point ARN that has the access policy.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/DeleteS3AccessPolicyRequest AWS API Documentation
+    #
+    class DeleteS3AccessPolicyRequest < Struct.new(
+      :s3_access_point_arn)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/DeleteS3AccessPolicyResponse AWS API Documentation
+    #
+    class DeleteS3AccessPolicyResponse < Aws::EmptyStructure; end
+
     # @!attribute [rw] id
     #   The sequence store's ID.
     #   @return [String]
@@ -3068,6 +3119,50 @@ module Aws::Omics
       include Aws::Structure
     end
 
+    # @!attribute [rw] s3_access_point_arn
+    #   The S3 access point ARN that has the access policy.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetS3AccessPolicyRequest AWS API Documentation
+    #
+    class GetS3AccessPolicyRequest < Struct.new(
+      :s3_access_point_arn)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
+    # @!attribute [rw] s3_access_point_arn
+    #   The S3 access point ARN that has the access policy.
+    #   @return [String]
+    #
+    # @!attribute [rw] store_id
+    #   The AWS-generated Sequence Store or Reference Store ID.
+    #   @return [String]
+    #
+    # @!attribute [rw] store_type
+    #   The type of store associated with the access point.
+    #   @return [String]
+    #
+    # @!attribute [rw] update_time
+    #   The time when the policy was last updated.
+    #   @return [Time]
+    #
+    # @!attribute [rw] s3_access_policy
+    #   The current resource policy that controls S3 access on the store.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetS3AccessPolicyResponse AWS API Documentation
+    #
+    class GetS3AccessPolicyResponse < Struct.new(
+      :s3_access_point_arn,
+      :store_id,
+      :store_type,
+      :update_time,
+      :s3_access_policy)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
     # @!attribute [rw] id
     #   The store's ID.
     #   @return [String]
@@ -3118,6 +3213,23 @@ module Aws::Omics
     #   The algorithm family of the ETag.
     #   @return [String]
     #
+    # @!attribute [rw] status
+    #   The status of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] status_message
+    #   The status message of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] propagated_set_level_tags
+    #   The tags keys to propagate to the S3 objects associated with read
+    #   sets in the sequence store.
+    #   @return [Array<String>]
+    #
+    # @!attribute [rw] update_time
+    #   The last-updated time of the sequence store.
+    #   @return [Time]
+    #
     # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetSequenceStoreResponse AWS API Documentation
     #
     class GetSequenceStoreResponse < Struct.new(
@@ -3129,7 +3241,11 @@ module Aws::Omics
       :creation_time,
       :fallback_location,
       :s3_access,
-      :e_tag_algorithm_family)
+      :e_tag_algorithm_family,
+      :status,
+      :status_message,
+      :propagated_set_level_tags,
+      :update_time)
       SENSITIVE = []
       include Aws::Structure
     end
@@ -4812,6 +4928,45 @@ module Aws::Omics
       include Aws::Structure
     end
 
+    # @!attribute [rw] s3_access_point_arn
+    #   The S3 access point ARN where you want to put the access policy.
+    #   @return [String]
+    #
+    # @!attribute [rw] s3_access_policy
+    #   The resource policy that controls S3 access to the store.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/PutS3AccessPolicyRequest AWS API Documentation
+    #
+    class PutS3AccessPolicyRequest < Struct.new(
+      :s3_access_point_arn,
+      :s3_access_policy)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
+    # @!attribute [rw] s3_access_point_arn
+    #   The S3 access point ARN that now has the access policy.
+    #   @return [String]
+    #
+    # @!attribute [rw] store_id
+    #   The AWS-generated Sequence Store or Reference Store ID.
+    #   @return [String]
+    #
+    # @!attribute [rw] store_type
+    #   The type of store associated with the access point.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/PutS3AccessPolicyResponse AWS API Documentation
+    #
+    class PutS3AccessPolicyResponse < Struct.new(
+      :s3_access_point_arn,
+      :store_id,
+      :store_type)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
     # The ranges specified in the request are not valid.
     #
     # @!attribute [rw] message
@@ -5536,6 +5691,20 @@ module Aws::Omics
       include Aws::Structure
     end
 
+    # S3 access configuration parameters.
+    #
+    # @!attribute [rw] access_log_location
+    #   Location of the access logs.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/S3AccessConfig AWS API Documentation
+    #
+    class S3AccessConfig < Struct.new(
+      :access_log_location)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
     # Details about a sequence.
     #
     # @!attribute [rw] total_read_count
@@ -5600,6 +5769,18 @@ module Aws::Omics
     #   The algorithm family of the ETag.
     #   @return [String]
     #
+    # @!attribute [rw] status
+    #   Status of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] status_message
+    #   The status message of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] update_time
+    #   The last-updated time of the Sequence Store.
+    #   @return [Time]
+    #
     # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreDetail AWS API Documentation
     #
     class SequenceStoreDetail < Struct.new(
@@ -5610,7 +5791,10 @@ module Aws::Omics
       :sse_config,
       :creation_time,
       :fallback_location,
-      :e_tag_algorithm_family)
+      :e_tag_algorithm_family,
+      :status,
+      :status_message,
+      :update_time)
       SENSITIVE = []
       include Aws::Structure
     end
@@ -5629,12 +5813,27 @@ module Aws::Omics
     #   The filter's end date.
     #   @return [Time]
     #
+    # @!attribute [rw] status
+    #   Filter results based on status.
+    #   @return [String]
+    #
+    # @!attribute [rw] updated_after
+    #   Filter results based on stores updated after the specified time.
+    #   @return [Time]
+    #
+    # @!attribute [rw] updated_before
+    #   Filter results based on stores updated before the specified time.
+    #   @return [Time]
+    #
     # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreFilter AWS API Documentation
     #
     class SequenceStoreFilter < Struct.new(
       :name,
       :created_after,
-      :created_before)
+      :created_before,
+      :status,
+      :updated_after,
+      :updated_before)
       SENSITIVE = []
       include Aws::Structure
     end
@@ -5650,11 +5849,16 @@ module Aws::Omics
     #   storing read sets.
     #   @return [String]
     #
+    # @!attribute [rw] access_log_location
+    #   Location of the access logs.
+    #   @return [String]
+    #
     # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreS3Access AWS API Documentation
     #
     class SequenceStoreS3Access < Struct.new(
       :s3_uri,
-      :s3_access_point_arn)
+      :s3_access_point_arn,
+      :access_log_location)
       SENSITIVE = []
       include Aws::Structure
     end
@@ -6781,6 +6985,128 @@ module Aws::Omics
       include Aws::Structure
     end
 
+    # @!attribute [rw] id
+    #   The ID of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] name
+    #   A name for the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] description
+    #   A description for the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] client_token
+    #   To ensure that requests don't run multiple times, specify a unique
+    #   token for each request.
+    #
+    #   **A suitable default value is auto-generated.** You should normally
+    #   not need to pass this option.
+    #   @return [String]
+    #
+    # @!attribute [rw] fallback_location
+    #   The S3 URI of a bucket and folder to store Read Sets that fail to
+    #   upload.
+    #   @return [String]
+    #
+    # @!attribute [rw] propagated_set_level_tags
+    #   The tags keys to propagate to the S3 objects associated with read
+    #   sets in the sequence store.
+    #   @return [Array<String>]
+    #
+    # @!attribute [rw] s3_access_config
+    #   S3 access configuration parameters.
+    #   @return [Types::S3AccessConfig]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateSequenceStoreRequest AWS API Documentation
+    #
+    class UpdateSequenceStoreRequest < Struct.new(
+      :id,
+      :name,
+      :description,
+      :client_token,
+      :fallback_location,
+      :propagated_set_level_tags,
+      :s3_access_config)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
+    # @!attribute [rw] id
+    #   The ID of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] arn
+    #   The ARN of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] name
+    #   The name of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] description
+    #   Description of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] sse_config
+    #   Server-side encryption (SSE) settings for a store.
+    #   @return [Types::SseConfig]
+    #
+    # @!attribute [rw] creation_time
+    #   The time when the store was created.
+    #   @return [Time]
+    #
+    # @!attribute [rw] update_time
+    #   The last-updated time of the Sequence Store.
+    #   @return [Time]
+    #
+    # @!attribute [rw] propagated_set_level_tags
+    #   The tags keys to propagate to the S3 objects associated with read
+    #   sets in the sequence store.
+    #   @return [Array<String>]
+    #
+    # @!attribute [rw] status
+    #   The status of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] status_message
+    #   The status message of the sequence store.
+    #   @return [String]
+    #
+    # @!attribute [rw] fallback_location
+    #   The S3 URI of a bucket and folder to store Read Sets that fail to
+    #   upload.
+    #   @return [String]
+    #
+    # @!attribute [rw] s3_access
+    #   The S3 access metadata of the sequence store.
+    #   @return [Types::SequenceStoreS3Access]
+    #
+    # @!attribute [rw] e_tag_algorithm_family
+    #   The ETag algorithm family to use on ingested read sets.
+    #   @return [String]
+    #
+    # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateSequenceStoreResponse AWS API Documentation
+    #
+    class UpdateSequenceStoreResponse < Struct.new(
+      :id,
+      :arn,
+      :name,
+      :description,
+      :sse_config,
+      :creation_time,
+      :update_time,
+      :propagated_set_level_tags,
+      :status,
+      :status_message,
+      :fallback_location,
+      :s3_access,
+      :e_tag_algorithm_family)
+      SENSITIVE = []
+      include Aws::Structure
+    end
+
     # @!attribute [rw] name
     #   A name for the store.
     #   @return [String]

data/lib/aws-sdk-omics.rb

@@ -55,7 +55,7 @@ module Aws::Omics
   autoload :EndpointProvider, 'aws-sdk-omics/endpoint_provider'
   autoload :Endpoints, 'aws-sdk-omics/endpoints'
 
-  GEM_VERSION = '1.40.0'
+  GEM_VERSION = '1.42.0'
 
 end
 

data/sig/client.rbs

@@ -39,7 +39,9 @@ module Aws
                       ?logger: untyped,
                       ?max_attempts: Integer,
                       ?profile: String,
+                      ?request_checksum_calculation: String,
                       ?request_min_compression_size_bytes: Integer,
+                      ?response_checksum_validation: String,
                       ?retry_backoff: Proc,
                       ?retry_base_delay: Float,
                       ?retry_jitter: (:none | :equal | :full | ^(Integer) -> Integer),
@@ -311,6 +313,10 @@ module Aws
         def creation_time: () -> ::Time
         def fallback_location: () -> ::String
         def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
+        def status: () -> ("CREATING" | "ACTIVE" | "UPDATING" | "DELETING" | "FAILED")
+        def status_message: () -> ::String
+        def propagated_set_level_tags: () -> ::Array[::String]
+        def s3_access: () -> Types::SequenceStoreS3Access
       end
       # https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#create_sequence_store-instance_method
       def create_sequence_store: (
@@ -323,7 +329,11 @@ module Aws
                                    ?tags: Hash[::String, ::String],
                                    ?client_token: ::String,
                                    ?fallback_location: ::String,
-                                   ?e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
+                                   ?e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up"),
+                                   ?propagated_set_level_tags: Array[::String],
+                                   ?s3_access_config: {
+                                     access_log_location: ::String?
+                                   }
                                  ) -> _CreateSequenceStoreResponseSuccess
                                | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _CreateSequenceStoreResponseSuccess
 
@@ -450,6 +460,15 @@ module Aws
                             ) -> ::Seahorse::Client::_ResponseSuccess[::Aws::EmptyStructure]
                           | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> ::Seahorse::Client::_ResponseSuccess[::Aws::EmptyStructure]
 
+      interface _DeleteS3AccessPolicyResponseSuccess
+        include ::Seahorse::Client::_ResponseSuccess[Types::DeleteS3AccessPolicyResponse]
+      end
+      # https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#delete_s3_access_policy-instance_method
+      def delete_s3_access_policy: (
+                                     s3_access_point_arn: ::String
+                                   ) -> _DeleteS3AccessPolicyResponseSuccess
+                                 | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _DeleteS3AccessPolicyResponseSuccess
+
       interface _DeleteSequenceStoreResponseSuccess
         include ::Seahorse::Client::_ResponseSuccess[Types::DeleteSequenceStoreResponse]
       end
@@ -823,6 +842,20 @@ module Aws
                         ) -> _GetRunTaskResponseSuccess
                       | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _GetRunTaskResponseSuccess
 
+      interface _GetS3AccessPolicyResponseSuccess
+        include ::Seahorse::Client::_ResponseSuccess[Types::GetS3AccessPolicyResponse]
+        def s3_access_point_arn: () -> ::String
+        def store_id: () -> ::String
+        def store_type: () -> ("SEQUENCE_STORE" | "REFERENCE_STORE")
+        def update_time: () -> ::Time
+        def s3_access_policy: () -> ::String
+      end
+      # https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#get_s3_access_policy-instance_method
+      def get_s3_access_policy: (
+                                  s3_access_point_arn: ::String
+                                ) -> _GetS3AccessPolicyResponseSuccess
+                              | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _GetS3AccessPolicyResponseSuccess
+
       interface _GetSequenceStoreResponseSuccess
         include ::Seahorse::Client::_ResponseSuccess[Types::GetSequenceStoreResponse]
         def id: () -> ::String
@@ -834,6 +867,10 @@ module Aws
         def fallback_location: () -> ::String
         def s3_access: () -> Types::SequenceStoreS3Access
         def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
+        def status: () -> ("CREATING" | "ACTIVE" | "UPDATING" | "DELETING" | "FAILED")
+        def status_message: () -> ::String
+        def propagated_set_level_tags: () -> ::Array[::String]
+        def update_time: () -> ::Time
       end
       # https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#get_sequence_store-instance_method
       def get_sequence_store: (
@@ -1200,7 +1237,10 @@ module Aws
                                   ?filter: {
                                     name: ::String?,
                                     created_after: ::Time?,
-                                    created_before: ::Time?
+                                    created_before: ::Time?,
+                                    status: ("CREATING" | "ACTIVE" | "UPDATING" | "DELETING" | "FAILED")?,
+                                    updated_after: ::Time?,
+                                    updated_before: ::Time?
                                   }
                                 ) -> _ListSequenceStoresResponseSuccess
                               | (?Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _ListSequenceStoresResponseSuccess
@@ -1280,6 +1320,19 @@ module Aws
                           ) -> _ListWorkflowsResponseSuccess
                         | (?Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _ListWorkflowsResponseSuccess
 
+      interface _PutS3AccessPolicyResponseSuccess
+        include ::Seahorse::Client::_ResponseSuccess[Types::PutS3AccessPolicyResponse]
+        def s3_access_point_arn: () -> ::String
+        def store_id: () -> ::String
+        def store_type: () -> ("SEQUENCE_STORE" | "REFERENCE_STORE")
+      end
+      # https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#put_s3_access_policy-instance_method
+      def put_s3_access_policy: (
+                                  s3_access_point_arn: ::String,
+                                  s3_access_policy: ::String
+                                ) -> _PutS3AccessPolicyResponseSuccess
+                              | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _PutS3AccessPolicyResponseSuccess
+
       interface _StartAnnotationImportJobResponseSuccess
         include ::Seahorse::Client::_ResponseSuccess[Types::StartAnnotationImportResponse]
         def job_id: () -> ::String
@@ -1544,6 +1597,36 @@ module Aws
                             ) -> ::Seahorse::Client::_ResponseSuccess[::Aws::EmptyStructure]
                           | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> ::Seahorse::Client::_ResponseSuccess[::Aws::EmptyStructure]
 
+      interface _UpdateSequenceStoreResponseSuccess
+        include ::Seahorse::Client::_ResponseSuccess[Types::UpdateSequenceStoreResponse]
+        def id: () -> ::String
+        def arn: () -> ::String
+        def name: () -> ::String
+        def description: () -> ::String
+        def sse_config: () -> Types::SseConfig
+        def creation_time: () -> ::Time
+        def update_time: () -> ::Time
+        def propagated_set_level_tags: () -> ::Array[::String]
+        def status: () -> ("CREATING" | "ACTIVE" | "UPDATING" | "DELETING" | "FAILED")
+        def status_message: () -> ::String
+        def fallback_location: () -> ::String
+        def s3_access: () -> Types::SequenceStoreS3Access
+        def e_tag_algorithm_family: () -> ("MD5up" | "SHA256up" | "SHA512up")
+      end
+      # https://docs.aws.amazon.com/sdk-for-ruby/v3/api/Aws/Omics/Client.html#update_sequence_store-instance_method
+      def update_sequence_store: (
+                                   id: ::String,
+                                   ?name: ::String,
+                                   ?description: ::String,
+                                   ?client_token: ::String,
+                                   ?fallback_location: ::String,
+                                   ?propagated_set_level_tags: Array[::String],
+                                   ?s3_access_config: {
+                                     access_log_location: ::String?
+                                   }
+                                 ) -> _UpdateSequenceStoreResponseSuccess
+                               | (Hash[Symbol, untyped] params, ?Hash[Symbol, untyped] options) -> _UpdateSequenceStoreResponseSuccess
+
       interface _UpdateVariantStoreResponseSuccess
         include ::Seahorse::Client::_ResponseSuccess[Types::UpdateVariantStoreResponse]
         def id: () -> ::String

data/sig/resource.rbs

@@ -39,7 +39,9 @@ module Aws
                         ?logger: untyped,
                         ?max_attempts: Integer,
                         ?profile: String,
+                        ?request_checksum_calculation: String,
                         ?request_min_compression_size_bytes: Integer,
+                        ?response_checksum_validation: String,
                         ?retry_backoff: Proc,
                         ?retry_base_delay: Float,
                         ?retry_jitter: (:none | :equal | :full | ^(Integer) -> Integer),