aws-sdk-omics 1.39.0 → 1.41.0

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@@ -893,6 +893,106 @@ module Aws::Omics
893
893
  include Aws::Structure
894
894
  end
895
895
 
896
+ # @!attribute [rw] cache_behavior
897
+ # Default cache behavior for runs that use this cache. Supported
898
+ # values are:
899
+ #
900
+ # `CACHE_ON_FAILURE`: Caches task outputs from completed tasks for
901
+ # runs that fail. This setting is useful if you're debugging a
902
+ # workflow that fails after several tasks completed successfully. The
903
+ # subsequent run uses the cache outputs for previously-completed tasks
904
+ # if the task definition, inputs, and container in ECR are identical
905
+ # to the prior run.
906
+ #
907
+ # `CACHE_ALWAYS`: Caches task outputs from completed tasks for all
908
+ # runs. This setting is useful in development mode, but do not use it
909
+ # in a production setting.
910
+ #
911
+ # If you don't specify a value, the default behavior is
912
+ # CACHE\_ON\_FAILURE. When you start a run that uses this cache, you
913
+ # can override the default cache behavior.
914
+ #
915
+ # For more information, see [Run cache behavior][1] in the AWS
916
+ # HealthOmics User Guide.
917
+ #
918
+ #
919
+ #
920
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/how-run-cache.html#run-cache-behavior
921
+ # @return [String]
922
+ #
923
+ # @!attribute [rw] cache_s3_location
924
+ # Specify the S3 location for storing the cached task outputs. This
925
+ # data must be immediately accessible (not in an archived state).
926
+ # @return [String]
927
+ #
928
+ # @!attribute [rw] description
929
+ # Enter a description of the run cache.
930
+ # @return [String]
931
+ #
932
+ # @!attribute [rw] name
933
+ # Enter a user-friendly name for the run cache.
934
+ # @return [String]
935
+ #
936
+ # @!attribute [rw] request_id
937
+ # A unique request token, to ensure idempotency. If you don't specify
938
+ # a token, HealthOmics automatically generates a universally unique
939
+ # identifier (UUID) for the request.
940
+ #
941
+ # **A suitable default value is auto-generated.** You should normally
942
+ # not need to pass this option.
943
+ # @return [String]
944
+ #
945
+ # @!attribute [rw] tags
946
+ # Specify one or more tags to associate with this run cache.
947
+ # @return [Hash<String,String>]
948
+ #
949
+ # @!attribute [rw] cache_bucket_owner_id
950
+ # The AWS account ID of the expected owner of the S3 bucket for the
951
+ # run cache. If not provided, your account ID is set as the owner of
952
+ # the bucket.
953
+ # @return [String]
954
+ #
955
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateRunCacheRequest AWS API Documentation
956
+ #
957
+ class CreateRunCacheRequest < Struct.new(
958
+ :cache_behavior,
959
+ :cache_s3_location,
960
+ :description,
961
+ :name,
962
+ :request_id,
963
+ :tags,
964
+ :cache_bucket_owner_id)
965
+ SENSITIVE = []
966
+ include Aws::Structure
967
+ end
968
+
969
+ # @!attribute [rw] arn
970
+ # Unique resource identifier for the run cache.
971
+ # @return [String]
972
+ #
973
+ # @!attribute [rw] id
974
+ # Identifier for the run cache.
975
+ # @return [String]
976
+ #
977
+ # @!attribute [rw] status
978
+ # Run cache status.
979
+ # @return [String]
980
+ #
981
+ # @!attribute [rw] tags
982
+ # The tags associated with this run cache.
983
+ # @return [Hash<String,String>]
984
+ #
985
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateRunCacheResponse AWS API Documentation
986
+ #
987
+ class CreateRunCacheResponse < Struct.new(
988
+ :arn,
989
+ :id,
990
+ :status,
991
+ :tags)
992
+ SENSITIVE = []
993
+ include Aws::Structure
994
+ end
995
+
896
996
  # @!attribute [rw] name
897
997
  # A name for the group.
898
998
  # @return [String]
@@ -983,6 +1083,9 @@ module Aws::Omics
983
1083
  # @!attribute [rw] client_token
984
1084
  # To ensure that requests don't run multiple times, specify a unique
985
1085
  # token for each request.
1086
+ #
1087
+ # **A suitable default value is auto-generated.** You should normally
1088
+ # not need to pass this option.
986
1089
  # @return [String]
987
1090
  #
988
1091
  # @!attribute [rw] fallback_location
@@ -994,6 +1097,15 @@ module Aws::Omics
994
1097
  # The ETag algorithm family to use for ingested read sets.
995
1098
  # @return [String]
996
1099
  #
1100
+ # @!attribute [rw] propagated_set_level_tags
1101
+ # The tags keys to propagate to the S3 objects associated with read
1102
+ # sets in the sequence store.
1103
+ # @return [Array<String>]
1104
+ #
1105
+ # @!attribute [rw] s3_access_config
1106
+ # S3 access configuration parameters
1107
+ # @return [Types::S3AccessConfig]
1108
+ #
997
1109
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreRequest AWS API Documentation
998
1110
  #
999
1111
  class CreateSequenceStoreRequest < Struct.new(
@@ -1003,7 +1115,9 @@ module Aws::Omics
1003
1115
  :tags,
1004
1116
  :client_token,
1005
1117
  :fallback_location,
1006
- :e_tag_algorithm_family)
1118
+ :e_tag_algorithm_family,
1119
+ :propagated_set_level_tags,
1120
+ :s3_access_config)
1007
1121
  SENSITIVE = []
1008
1122
  include Aws::Structure
1009
1123
  end
@@ -1041,6 +1155,23 @@ module Aws::Omics
1041
1155
  # The algorithm family of the ETag.
1042
1156
  # @return [String]
1043
1157
  #
1158
+ # @!attribute [rw] status
1159
+ # The status of the sequence store.
1160
+ # @return [String]
1161
+ #
1162
+ # @!attribute [rw] status_message
1163
+ # The status message of the sequence store.
1164
+ # @return [String]
1165
+ #
1166
+ # @!attribute [rw] propagated_set_level_tags
1167
+ # The tags keys to propagate to the S3 objects associated with read
1168
+ # sets in the sequence store.
1169
+ # @return [Array<String>]
1170
+ #
1171
+ # @!attribute [rw] s3_access
1172
+ # The S3 access metadata of the sequence store.
1173
+ # @return [Types::SequenceStoreS3Access]
1174
+ #
1044
1175
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/CreateSequenceStoreResponse AWS API Documentation
1045
1176
  #
1046
1177
  class CreateSequenceStoreResponse < Struct.new(
@@ -1051,7 +1182,11 @@ module Aws::Omics
1051
1182
  :sse_config,
1052
1183
  :creation_time,
1053
1184
  :fallback_location,
1054
- :e_tag_algorithm_family)
1185
+ :e_tag_algorithm_family,
1186
+ :status,
1187
+ :status_message,
1188
+ :propagated_set_level_tags,
1189
+ :s3_access)
1055
1190
  SENSITIVE = []
1056
1191
  include Aws::Structure
1057
1192
  end
@@ -1361,6 +1496,18 @@ module Aws::Omics
1361
1496
  #
1362
1497
  class DeleteReferenceStoreResponse < Aws::EmptyStructure; end
1363
1498
 
1499
+ # @!attribute [rw] id
1500
+ # Run cache identifier for the cache you want to delete.
1501
+ # @return [String]
1502
+ #
1503
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/DeleteRunCacheRequest AWS API Documentation
1504
+ #
1505
+ class DeleteRunCacheRequest < Struct.new(
1506
+ :id)
1507
+ SENSITIVE = []
1508
+ include Aws::Structure
1509
+ end
1510
+
1364
1511
  # @!attribute [rw] id
1365
1512
  # The run group's ID.
1366
1513
  # @return [String]
@@ -1385,6 +1532,22 @@ module Aws::Omics
1385
1532
  include Aws::Structure
1386
1533
  end
1387
1534
 
1535
+ # @!attribute [rw] s3_access_point_arn
1536
+ # The S3 access point ARN that has the access policy.
1537
+ # @return [String]
1538
+ #
1539
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/DeleteS3AccessPolicyRequest AWS API Documentation
1540
+ #
1541
+ class DeleteS3AccessPolicyRequest < Struct.new(
1542
+ :s3_access_point_arn)
1543
+ SENSITIVE = []
1544
+ include Aws::Structure
1545
+ end
1546
+
1547
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/DeleteS3AccessPolicyResponse AWS API Documentation
1548
+ #
1549
+ class DeleteS3AccessPolicyResponse < Aws::EmptyStructure; end
1550
+
1388
1551
  # @!attribute [rw] id
1389
1552
  # The sequence store's ID.
1390
1553
  # @return [String]
@@ -2527,6 +2690,75 @@ module Aws::Omics
2527
2690
  include Aws::Structure
2528
2691
  end
2529
2692
 
2693
+ # @!attribute [rw] id
2694
+ # The identifier of the run cache to retrieve.
2695
+ # @return [String]
2696
+ #
2697
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetRunCacheRequest AWS API Documentation
2698
+ #
2699
+ class GetRunCacheRequest < Struct.new(
2700
+ :id)
2701
+ SENSITIVE = []
2702
+ include Aws::Structure
2703
+ end
2704
+
2705
+ # @!attribute [rw] arn
2706
+ # Unique resource identifier for the run cache.
2707
+ # @return [String]
2708
+ #
2709
+ # @!attribute [rw] cache_behavior
2710
+ # The default cache behavior for runs using this cache.
2711
+ # @return [String]
2712
+ #
2713
+ # @!attribute [rw] cache_bucket_owner_id
2714
+ # The identifier of the bucket owner.
2715
+ # @return [String]
2716
+ #
2717
+ # @!attribute [rw] cache_s3_uri
2718
+ # The S3 URI where the cache data is stored.
2719
+ # @return [String]
2720
+ #
2721
+ # @!attribute [rw] creation_time
2722
+ # Creation time of the run cache (an ISO 8601 formatted string).
2723
+ # @return [Time]
2724
+ #
2725
+ # @!attribute [rw] description
2726
+ # The run cache description.
2727
+ # @return [String]
2728
+ #
2729
+ # @!attribute [rw] id
2730
+ # The run cache ID.
2731
+ # @return [String]
2732
+ #
2733
+ # @!attribute [rw] name
2734
+ # The run cache name.
2735
+ # @return [String]
2736
+ #
2737
+ # @!attribute [rw] status
2738
+ # The run cache status.
2739
+ # @return [String]
2740
+ #
2741
+ # @!attribute [rw] tags
2742
+ # The tags associated with the run cache.
2743
+ # @return [Hash<String,String>]
2744
+ #
2745
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetRunCacheResponse AWS API Documentation
2746
+ #
2747
+ class GetRunCacheResponse < Struct.new(
2748
+ :arn,
2749
+ :cache_behavior,
2750
+ :cache_bucket_owner_id,
2751
+ :cache_s3_uri,
2752
+ :creation_time,
2753
+ :description,
2754
+ :id,
2755
+ :name,
2756
+ :status,
2757
+ :tags)
2758
+ SENSITIVE = []
2759
+ include Aws::Structure
2760
+ end
2761
+
2530
2762
  # @!attribute [rw] id
2531
2763
  # The group's ID.
2532
2764
  # @return [String]
@@ -2616,6 +2848,18 @@ module Aws::Omics
2616
2848
  # The run's ID.
2617
2849
  # @return [String]
2618
2850
  #
2851
+ # @!attribute [rw] cache_id
2852
+ # The run cache associated with the run.
2853
+ # @return [String]
2854
+ #
2855
+ # @!attribute [rw] cache_behavior
2856
+ # The run cache behavior for the run.
2857
+ # @return [String]
2858
+ #
2859
+ # @!attribute [rw] engine_version
2860
+ # The workflow engine version.
2861
+ # @return [String]
2862
+ #
2619
2863
  # @!attribute [rw] status
2620
2864
  # The run's status.
2621
2865
  # @return [String]
@@ -2739,6 +2983,9 @@ module Aws::Omics
2739
2983
  class GetRunResponse < Struct.new(
2740
2984
  :arn,
2741
2985
  :id,
2986
+ :cache_id,
2987
+ :cache_behavior,
2988
+ :engine_version,
2742
2989
  :status,
2743
2990
  :workflow_id,
2744
2991
  :workflow_type,
@@ -2805,6 +3052,15 @@ module Aws::Omics
2805
3052
  # The task's CPU usage.
2806
3053
  # @return [Integer]
2807
3054
  #
3055
+ # @!attribute [rw] cache_hit
3056
+ # Set to true if AWS HealthOmics found a matching entry in the run
3057
+ # cache for this task.
3058
+ # @return [Boolean]
3059
+ #
3060
+ # @!attribute [rw] cache_s3_uri
3061
+ # The S3 URI of the cache location.
3062
+ # @return [String]
3063
+ #
2808
3064
  # @!attribute [rw] memory
2809
3065
  # The task's memory use in gigabytes.
2810
3066
  # @return [Integer]
@@ -2848,6 +3104,8 @@ module Aws::Omics
2848
3104
  :status,
2849
3105
  :name,
2850
3106
  :cpus,
3107
+ :cache_hit,
3108
+ :cache_s3_uri,
2851
3109
  :memory,
2852
3110
  :creation_time,
2853
3111
  :start_time,
@@ -2861,6 +3119,50 @@ module Aws::Omics
2861
3119
  include Aws::Structure
2862
3120
  end
2863
3121
 
3122
+ # @!attribute [rw] s3_access_point_arn
3123
+ # The S3 access point ARN that has the access policy.
3124
+ # @return [String]
3125
+ #
3126
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetS3AccessPolicyRequest AWS API Documentation
3127
+ #
3128
+ class GetS3AccessPolicyRequest < Struct.new(
3129
+ :s3_access_point_arn)
3130
+ SENSITIVE = []
3131
+ include Aws::Structure
3132
+ end
3133
+
3134
+ # @!attribute [rw] s3_access_point_arn
3135
+ # The S3 access point ARN that has the access policy.
3136
+ # @return [String]
3137
+ #
3138
+ # @!attribute [rw] store_id
3139
+ # The AWS-generated Sequence Store or Reference Store ID.
3140
+ # @return [String]
3141
+ #
3142
+ # @!attribute [rw] store_type
3143
+ # The type of store associated with the access point.
3144
+ # @return [String]
3145
+ #
3146
+ # @!attribute [rw] update_time
3147
+ # The time when the policy was last updated.
3148
+ # @return [Time]
3149
+ #
3150
+ # @!attribute [rw] s3_access_policy
3151
+ # The current resource policy that controls S3 access on the store.
3152
+ # @return [String]
3153
+ #
3154
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetS3AccessPolicyResponse AWS API Documentation
3155
+ #
3156
+ class GetS3AccessPolicyResponse < Struct.new(
3157
+ :s3_access_point_arn,
3158
+ :store_id,
3159
+ :store_type,
3160
+ :update_time,
3161
+ :s3_access_policy)
3162
+ SENSITIVE = []
3163
+ include Aws::Structure
3164
+ end
3165
+
2864
3166
  # @!attribute [rw] id
2865
3167
  # The store's ID.
2866
3168
  # @return [String]
@@ -2911,6 +3213,23 @@ module Aws::Omics
2911
3213
  # The algorithm family of the ETag.
2912
3214
  # @return [String]
2913
3215
  #
3216
+ # @!attribute [rw] status
3217
+ # The status of the sequence store.
3218
+ # @return [String]
3219
+ #
3220
+ # @!attribute [rw] status_message
3221
+ # The status message of the sequence store.
3222
+ # @return [String]
3223
+ #
3224
+ # @!attribute [rw] propagated_set_level_tags
3225
+ # The tags keys to propagate to the S3 objects associated with read
3226
+ # sets in the sequence store.
3227
+ # @return [Array<String>]
3228
+ #
3229
+ # @!attribute [rw] update_time
3230
+ # The last-updated time of the sequence store.
3231
+ # @return [Time]
3232
+ #
2914
3233
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/GetSequenceStoreResponse AWS API Documentation
2915
3234
  #
2916
3235
  class GetSequenceStoreResponse < Struct.new(
@@ -2922,7 +3241,11 @@ module Aws::Omics
2922
3241
  :creation_time,
2923
3242
  :fallback_location,
2924
3243
  :s3_access,
2925
- :e_tag_algorithm_family)
3244
+ :e_tag_algorithm_family,
3245
+ :status,
3246
+ :status_message,
3247
+ :propagated_set_level_tags,
3248
+ :update_time)
2926
3249
  SENSITIVE = []
2927
3250
  include Aws::Structure
2928
3251
  end
@@ -4074,6 +4397,43 @@ module Aws::Omics
4074
4397
  include Aws::Structure
4075
4398
  end
4076
4399
 
4400
+ # @!attribute [rw] max_results
4401
+ # The maximum number of results to return.
4402
+ # @return [Integer]
4403
+ #
4404
+ # @!attribute [rw] starting_token
4405
+ # Optional pagination token returned from a prior call to the
4406
+ # `ListRunCaches` API operation.
4407
+ # @return [String]
4408
+ #
4409
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListRunCachesRequest AWS API Documentation
4410
+ #
4411
+ class ListRunCachesRequest < Struct.new(
4412
+ :max_results,
4413
+ :starting_token)
4414
+ SENSITIVE = []
4415
+ include Aws::Structure
4416
+ end
4417
+
4418
+ # @!attribute [rw] items
4419
+ # Details about each run cache in the response.
4420
+ # @return [Array<Types::RunCacheListItem>]
4421
+ #
4422
+ # @!attribute [rw] next_token
4423
+ # Pagination token to retrieve additional run caches. If the response
4424
+ # does not have a `nextToken`value, you have reached to the end of the
4425
+ # list.
4426
+ # @return [String]
4427
+ #
4428
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/ListRunCachesResponse AWS API Documentation
4429
+ #
4430
+ class ListRunCachesResponse < Struct.new(
4431
+ :items,
4432
+ :next_token)
4433
+ SENSITIVE = []
4434
+ include Aws::Structure
4435
+ end
4436
+
4077
4437
  # @!attribute [rw] name
4078
4438
  # The run groups' name.
4079
4439
  # @return [String]
@@ -4568,6 +4928,45 @@ module Aws::Omics
4568
4928
  include Aws::Structure
4569
4929
  end
4570
4930
 
4931
+ # @!attribute [rw] s3_access_point_arn
4932
+ # The S3 access point ARN where you want to put the access policy.
4933
+ # @return [String]
4934
+ #
4935
+ # @!attribute [rw] s3_access_policy
4936
+ # The resource policy that controls S3 access to the store.
4937
+ # @return [String]
4938
+ #
4939
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/PutS3AccessPolicyRequest AWS API Documentation
4940
+ #
4941
+ class PutS3AccessPolicyRequest < Struct.new(
4942
+ :s3_access_point_arn,
4943
+ :s3_access_policy)
4944
+ SENSITIVE = []
4945
+ include Aws::Structure
4946
+ end
4947
+
4948
+ # @!attribute [rw] s3_access_point_arn
4949
+ # The S3 access point ARN that now has the access policy.
4950
+ # @return [String]
4951
+ #
4952
+ # @!attribute [rw] store_id
4953
+ # The AWS-generated Sequence Store or Reference Store ID.
4954
+ # @return [String]
4955
+ #
4956
+ # @!attribute [rw] store_type
4957
+ # The type of store associated with the access point.
4958
+ # @return [String]
4959
+ #
4960
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/PutS3AccessPolicyResponse AWS API Documentation
4961
+ #
4962
+ class PutS3AccessPolicyResponse < Struct.new(
4963
+ :s3_access_point_arn,
4964
+ :store_id,
4965
+ :store_type)
4966
+ SENSITIVE = []
4967
+ include Aws::Structure
4968
+ end
4969
+
4571
4970
  # The ranges specified in the request are not valid.
4572
4971
  #
4573
4972
  # @!attribute [rw] message
@@ -5113,6 +5512,51 @@ module Aws::Omics
5113
5512
  include Aws::Structure
5114
5513
  end
5115
5514
 
5515
+ # List entry for one run cache.
5516
+ #
5517
+ # @!attribute [rw] arn
5518
+ # Unique resource identifier for the run cache.
5519
+ # @return [String]
5520
+ #
5521
+ # @!attribute [rw] cache_behavior
5522
+ # Default cache behavior for the run cache.
5523
+ # @return [String]
5524
+ #
5525
+ # @!attribute [rw] cache_s3_uri
5526
+ # The S3 uri for the run cache data.
5527
+ # @return [String]
5528
+ #
5529
+ # @!attribute [rw] creation_time
5530
+ # The time that this run cache was created (an ISO 8601 formatted
5531
+ # string).
5532
+ # @return [Time]
5533
+ #
5534
+ # @!attribute [rw] id
5535
+ # The identifier for this run cache.
5536
+ # @return [String]
5537
+ #
5538
+ # @!attribute [rw] name
5539
+ # The name of the run cache.
5540
+ # @return [String]
5541
+ #
5542
+ # @!attribute [rw] status
5543
+ # The run cache status.
5544
+ # @return [String]
5545
+ #
5546
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/RunCacheListItem AWS API Documentation
5547
+ #
5548
+ class RunCacheListItem < Struct.new(
5549
+ :arn,
5550
+ :cache_behavior,
5551
+ :cache_s3_uri,
5552
+ :creation_time,
5553
+ :id,
5554
+ :name,
5555
+ :status)
5556
+ SENSITIVE = []
5557
+ include Aws::Structure
5558
+ end
5559
+
5116
5560
  # A run group.
5117
5561
  #
5118
5562
  # @!attribute [rw] arn
@@ -5247,6 +5691,20 @@ module Aws::Omics
5247
5691
  include Aws::Structure
5248
5692
  end
5249
5693
 
5694
+ # S3 access configuration parameters.
5695
+ #
5696
+ # @!attribute [rw] access_log_location
5697
+ # Location of the access logs.
5698
+ # @return [String]
5699
+ #
5700
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/S3AccessConfig AWS API Documentation
5701
+ #
5702
+ class S3AccessConfig < Struct.new(
5703
+ :access_log_location)
5704
+ SENSITIVE = []
5705
+ include Aws::Structure
5706
+ end
5707
+
5250
5708
  # Details about a sequence.
5251
5709
  #
5252
5710
  # @!attribute [rw] total_read_count
@@ -5311,6 +5769,18 @@ module Aws::Omics
5311
5769
  # The algorithm family of the ETag.
5312
5770
  # @return [String]
5313
5771
  #
5772
+ # @!attribute [rw] status
5773
+ # Status of the sequence store.
5774
+ # @return [String]
5775
+ #
5776
+ # @!attribute [rw] status_message
5777
+ # The status message of the sequence store.
5778
+ # @return [String]
5779
+ #
5780
+ # @!attribute [rw] update_time
5781
+ # The last-updated time of the Sequence Store.
5782
+ # @return [Time]
5783
+ #
5314
5784
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreDetail AWS API Documentation
5315
5785
  #
5316
5786
  class SequenceStoreDetail < Struct.new(
@@ -5321,7 +5791,10 @@ module Aws::Omics
5321
5791
  :sse_config,
5322
5792
  :creation_time,
5323
5793
  :fallback_location,
5324
- :e_tag_algorithm_family)
5794
+ :e_tag_algorithm_family,
5795
+ :status,
5796
+ :status_message,
5797
+ :update_time)
5325
5798
  SENSITIVE = []
5326
5799
  include Aws::Structure
5327
5800
  end
@@ -5340,12 +5813,27 @@ module Aws::Omics
5340
5813
  # The filter's end date.
5341
5814
  # @return [Time]
5342
5815
  #
5816
+ # @!attribute [rw] status
5817
+ # Filter results based on status.
5818
+ # @return [String]
5819
+ #
5820
+ # @!attribute [rw] updated_after
5821
+ # Filter results based on stores updated after the specified time.
5822
+ # @return [Time]
5823
+ #
5824
+ # @!attribute [rw] updated_before
5825
+ # Filter results based on stores updated before the specified time.
5826
+ # @return [Time]
5827
+ #
5343
5828
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreFilter AWS API Documentation
5344
5829
  #
5345
5830
  class SequenceStoreFilter < Struct.new(
5346
5831
  :name,
5347
5832
  :created_after,
5348
- :created_before)
5833
+ :created_before,
5834
+ :status,
5835
+ :updated_after,
5836
+ :updated_before)
5349
5837
  SENSITIVE = []
5350
5838
  include Aws::Structure
5351
5839
  end
@@ -5361,11 +5849,16 @@ module Aws::Omics
5361
5849
  # storing read sets.
5362
5850
  # @return [String]
5363
5851
  #
5852
+ # @!attribute [rw] access_log_location
5853
+ # Location of the access logs.
5854
+ # @return [String]
5855
+ #
5364
5856
  # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/SequenceStoreS3Access AWS API Documentation
5365
5857
  #
5366
5858
  class SequenceStoreS3Access < Struct.new(
5367
5859
  :s3_uri,
5368
- :s3_access_point_arn)
5860
+ :s3_access_point_arn,
5861
+ :access_log_location)
5369
5862
  SENSITIVE = []
5370
5863
  include Aws::Structure
5371
5864
  end
@@ -5889,6 +6382,22 @@ module Aws::Omics
5889
6382
  # A name for the run.
5890
6383
  # @return [String]
5891
6384
  #
6385
+ # @!attribute [rw] cache_id
6386
+ # Identifier of the cache associated with this run. If you don't
6387
+ # specify a cache ID, no task outputs are cached for this run.
6388
+ # @return [String]
6389
+ #
6390
+ # @!attribute [rw] cache_behavior
6391
+ # The cache behavior for the run. You specify this value if you want
6392
+ # to override the default behavior for the cache. You had set the
6393
+ # default value when you created the cache. For more information, see
6394
+ # [Run cache behavior][1] in the AWS HealthOmics User Guide.
6395
+ #
6396
+ #
6397
+ #
6398
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/how-run-cache.html#run-cache-behavior
6399
+ # @return [String]
6400
+ #
5892
6401
  # @!attribute [rw] run_group_id
5893
6402
  # The run's group ID.
5894
6403
  # @return [String]
@@ -5928,7 +6437,22 @@ module Aws::Omics
5928
6437
  # @return [String]
5929
6438
  #
5930
6439
  # @!attribute [rw] retention_mode
5931
- # The retention mode for the run.
6440
+ # The retention mode for the run. The default value is RETAIN.
6441
+ #
6442
+ # HealthOmics stores a fixed number of runs that are available to the
6443
+ # console and API. In the default mode (RETAIN), you need to remove
6444
+ # runs manually when the number of run exceeds the maximum. If you set
6445
+ # the retention mode to `REMOVE`, HealthOmics automatically removes
6446
+ # runs (that have mode set to REMOVE) when the number of run exceeds
6447
+ # the maximum. All run logs are available in CloudWatch logs, if you
6448
+ # need information about a run that is no longer available to the API.
6449
+ #
6450
+ # For more information about retention mode, see [Specifying run
6451
+ # retention mode][1] in the *AWS HealthOmics User Guide*.
6452
+ #
6453
+ #
6454
+ #
6455
+ # [1]: https://docs.aws.amazon.com/omics/latest/dev/starting-a-run.html
5932
6456
  # @return [String]
5933
6457
  #
5934
6458
  # @!attribute [rw] storage_type
@@ -5950,6 +6474,8 @@ module Aws::Omics
5950
6474
  :run_id,
5951
6475
  :role_arn,
5952
6476
  :name,
6477
+ :cache_id,
6478
+ :cache_behavior,
5953
6479
  :run_group_id,
5954
6480
  :priority,
5955
6481
  :parameters,
@@ -5966,7 +6492,7 @@ module Aws::Omics
5966
6492
  end
5967
6493
 
5968
6494
  # @!attribute [rw] arn
5969
- # The run's ARN.
6495
+ # Unique resource identifier for the run.
5970
6496
  # @return [String]
5971
6497
  #
5972
6498
  # @!attribute [rw] id
@@ -6108,6 +6634,15 @@ module Aws::Omics
6108
6634
  # The task's CPU count.
6109
6635
  # @return [Integer]
6110
6636
  #
6637
+ # @!attribute [rw] cache_hit
6638
+ # Set to true if AWS HealthOmics found a matching entry in the run
6639
+ # cache for this task.
6640
+ # @return [Boolean]
6641
+ #
6642
+ # @!attribute [rw] cache_s3_uri
6643
+ # The S3 URI of the cache location.
6644
+ # @return [String]
6645
+ #
6111
6646
  # @!attribute [rw] memory
6112
6647
  # The task's memory use in gigabyes.
6113
6648
  # @return [Integer]
@@ -6140,6 +6675,8 @@ module Aws::Omics
6140
6675
  :status,
6141
6676
  :name,
6142
6677
  :cpus,
6678
+ :cache_hit,
6679
+ :cache_s3_uri,
6143
6680
  :memory,
6144
6681
  :creation_time,
6145
6682
  :start_time,
@@ -6384,6 +6921,33 @@ module Aws::Omics
6384
6921
  include Aws::Structure
6385
6922
  end
6386
6923
 
6924
+ # @!attribute [rw] cache_behavior
6925
+ # Update the default run cache behavior.
6926
+ # @return [String]
6927
+ #
6928
+ # @!attribute [rw] description
6929
+ # Update the run cache description.
6930
+ # @return [String]
6931
+ #
6932
+ # @!attribute [rw] id
6933
+ # The identifier of the run cache you want to update.
6934
+ # @return [String]
6935
+ #
6936
+ # @!attribute [rw] name
6937
+ # Update the name of the run cache.
6938
+ # @return [String]
6939
+ #
6940
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateRunCacheRequest AWS API Documentation
6941
+ #
6942
+ class UpdateRunCacheRequest < Struct.new(
6943
+ :cache_behavior,
6944
+ :description,
6945
+ :id,
6946
+ :name)
6947
+ SENSITIVE = []
6948
+ include Aws::Structure
6949
+ end
6950
+
6387
6951
  # @!attribute [rw] id
6388
6952
  # The group's ID.
6389
6953
  # @return [String]
@@ -6421,6 +6985,128 @@ module Aws::Omics
6421
6985
  include Aws::Structure
6422
6986
  end
6423
6987
 
6988
+ # @!attribute [rw] id
6989
+ # The ID of the sequence store.
6990
+ # @return [String]
6991
+ #
6992
+ # @!attribute [rw] name
6993
+ # A name for the sequence store.
6994
+ # @return [String]
6995
+ #
6996
+ # @!attribute [rw] description
6997
+ # A description for the sequence store.
6998
+ # @return [String]
6999
+ #
7000
+ # @!attribute [rw] client_token
7001
+ # To ensure that requests don't run multiple times, specify a unique
7002
+ # token for each request.
7003
+ #
7004
+ # **A suitable default value is auto-generated.** You should normally
7005
+ # not need to pass this option.
7006
+ # @return [String]
7007
+ #
7008
+ # @!attribute [rw] fallback_location
7009
+ # The S3 URI of a bucket and folder to store Read Sets that fail to
7010
+ # upload.
7011
+ # @return [String]
7012
+ #
7013
+ # @!attribute [rw] propagated_set_level_tags
7014
+ # The tags keys to propagate to the S3 objects associated with read
7015
+ # sets in the sequence store.
7016
+ # @return [Array<String>]
7017
+ #
7018
+ # @!attribute [rw] s3_access_config
7019
+ # S3 access configuration parameters.
7020
+ # @return [Types::S3AccessConfig]
7021
+ #
7022
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateSequenceStoreRequest AWS API Documentation
7023
+ #
7024
+ class UpdateSequenceStoreRequest < Struct.new(
7025
+ :id,
7026
+ :name,
7027
+ :description,
7028
+ :client_token,
7029
+ :fallback_location,
7030
+ :propagated_set_level_tags,
7031
+ :s3_access_config)
7032
+ SENSITIVE = []
7033
+ include Aws::Structure
7034
+ end
7035
+
7036
+ # @!attribute [rw] id
7037
+ # The ID of the sequence store.
7038
+ # @return [String]
7039
+ #
7040
+ # @!attribute [rw] arn
7041
+ # The ARN of the sequence store.
7042
+ # @return [String]
7043
+ #
7044
+ # @!attribute [rw] name
7045
+ # The name of the sequence store.
7046
+ # @return [String]
7047
+ #
7048
+ # @!attribute [rw] description
7049
+ # Description of the sequence store.
7050
+ # @return [String]
7051
+ #
7052
+ # @!attribute [rw] sse_config
7053
+ # Server-side encryption (SSE) settings for a store.
7054
+ # @return [Types::SseConfig]
7055
+ #
7056
+ # @!attribute [rw] creation_time
7057
+ # The time when the store was created.
7058
+ # @return [Time]
7059
+ #
7060
+ # @!attribute [rw] update_time
7061
+ # The last-updated time of the Sequence Store.
7062
+ # @return [Time]
7063
+ #
7064
+ # @!attribute [rw] propagated_set_level_tags
7065
+ # The tags keys to propagate to the S3 objects associated with read
7066
+ # sets in the sequence store.
7067
+ # @return [Array<String>]
7068
+ #
7069
+ # @!attribute [rw] status
7070
+ # The status of the sequence store.
7071
+ # @return [String]
7072
+ #
7073
+ # @!attribute [rw] status_message
7074
+ # The status message of the sequence store.
7075
+ # @return [String]
7076
+ #
7077
+ # @!attribute [rw] fallback_location
7078
+ # The S3 URI of a bucket and folder to store Read Sets that fail to
7079
+ # upload.
7080
+ # @return [String]
7081
+ #
7082
+ # @!attribute [rw] s3_access
7083
+ # The S3 access metadata of the sequence store.
7084
+ # @return [Types::SequenceStoreS3Access]
7085
+ #
7086
+ # @!attribute [rw] e_tag_algorithm_family
7087
+ # The ETag algorithm family to use on ingested read sets.
7088
+ # @return [String]
7089
+ #
7090
+ # @see http://docs.aws.amazon.com/goto/WebAPI/omics-2022-11-28/UpdateSequenceStoreResponse AWS API Documentation
7091
+ #
7092
+ class UpdateSequenceStoreResponse < Struct.new(
7093
+ :id,
7094
+ :arn,
7095
+ :name,
7096
+ :description,
7097
+ :sse_config,
7098
+ :creation_time,
7099
+ :update_time,
7100
+ :propagated_set_level_tags,
7101
+ :status,
7102
+ :status_message,
7103
+ :fallback_location,
7104
+ :s3_access,
7105
+ :e_tag_algorithm_family)
7106
+ SENSITIVE = []
7107
+ include Aws::Structure
7108
+ end
7109
+
6424
7110
  # @!attribute [rw] name
6425
7111
  # A name for the store.
6426
7112
  # @return [String]