aws-sdk-omics 1.22.0 → 1.24.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
data/sig/types.rbs ADDED
@@ -0,0 +1,1946 @@
1
+ # WARNING ABOUT GENERATED CODE
2
+ #
3
+ # This file is generated. See the contributing guide for more information:
4
+ # https://github.com/aws/aws-sdk-ruby/blob/version-3/CONTRIBUTING.md
5
+ #
6
+ # WARNING ABOUT GENERATED CODE
7
+
8
+ module Aws::Omics
9
+ module Types
10
+
11
+ class AbortMultipartReadSetUploadRequest
12
+ attr_accessor sequence_store_id: ::String
13
+ attr_accessor upload_id: ::String
14
+ SENSITIVE: []
15
+ end
16
+
17
+ class AbortMultipartReadSetUploadResponse < Aws::EmptyStructure
18
+ end
19
+
20
+ class AcceptShareRequest
21
+ attr_accessor share_id: ::String
22
+ SENSITIVE: []
23
+ end
24
+
25
+ class AcceptShareResponse
26
+ attr_accessor status: ("PENDING" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "FAILED")
27
+ SENSITIVE: []
28
+ end
29
+
30
+ class AccessDeniedException
31
+ attr_accessor message: ::String
32
+ SENSITIVE: []
33
+ end
34
+
35
+ class ActivateReadSetFilter
36
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
37
+ attr_accessor created_after: ::Time
38
+ attr_accessor created_before: ::Time
39
+ SENSITIVE: []
40
+ end
41
+
42
+ class ActivateReadSetJobItem
43
+ attr_accessor id: ::String
44
+ attr_accessor sequence_store_id: ::String
45
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
46
+ attr_accessor creation_time: ::Time
47
+ attr_accessor completion_time: ::Time
48
+ SENSITIVE: []
49
+ end
50
+
51
+ class ActivateReadSetSourceItem
52
+ attr_accessor read_set_id: ::String
53
+ attr_accessor status: ("NOT_STARTED" | "IN_PROGRESS" | "FINISHED" | "FAILED")
54
+ attr_accessor status_message: ::String
55
+ SENSITIVE: []
56
+ end
57
+
58
+ class AnnotationImportItemDetail
59
+ attr_accessor source: ::String
60
+ attr_accessor job_status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
61
+ SENSITIVE: []
62
+ end
63
+
64
+ class AnnotationImportItemSource
65
+ attr_accessor source: ::String
66
+ SENSITIVE: []
67
+ end
68
+
69
+ class AnnotationImportJobItem
70
+ attr_accessor id: ::String
71
+ attr_accessor destination_name: ::String
72
+ attr_accessor version_name: ::String
73
+ attr_accessor role_arn: ::String
74
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
75
+ attr_accessor creation_time: ::Time
76
+ attr_accessor update_time: ::Time
77
+ attr_accessor completion_time: ::Time
78
+ attr_accessor run_left_normalization: bool
79
+ attr_accessor annotation_fields: ::Hash[::String, ::String]
80
+ SENSITIVE: []
81
+ end
82
+
83
+ class AnnotationStoreItem
84
+ attr_accessor id: ::String
85
+ attr_accessor reference: Types::ReferenceItem
86
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
87
+ attr_accessor store_arn: ::String
88
+ attr_accessor name: ::String
89
+ attr_accessor store_format: ("GFF" | "TSV" | "VCF")
90
+ attr_accessor description: ::String
91
+ attr_accessor sse_config: Types::SseConfig
92
+ attr_accessor creation_time: ::Time
93
+ attr_accessor update_time: ::Time
94
+ attr_accessor status_message: ::String
95
+ attr_accessor store_size_bytes: ::Integer
96
+ SENSITIVE: []
97
+ end
98
+
99
+ class AnnotationStoreVersionItem
100
+ attr_accessor store_id: ::String
101
+ attr_accessor id: ::String
102
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
103
+ attr_accessor version_arn: ::String
104
+ attr_accessor name: ::String
105
+ attr_accessor version_name: ::String
106
+ attr_accessor description: ::String
107
+ attr_accessor creation_time: ::Time
108
+ attr_accessor update_time: ::Time
109
+ attr_accessor status_message: ::String
110
+ attr_accessor version_size_bytes: ::Integer
111
+ SENSITIVE: []
112
+ end
113
+
114
+ class BatchDeleteReadSetRequest
115
+ attr_accessor ids: ::Array[::String]
116
+ attr_accessor sequence_store_id: ::String
117
+ SENSITIVE: []
118
+ end
119
+
120
+ class BatchDeleteReadSetResponse
121
+ attr_accessor errors: ::Array[Types::ReadSetBatchError]
122
+ SENSITIVE: []
123
+ end
124
+
125
+ class CancelAnnotationImportRequest
126
+ attr_accessor job_id: ::String
127
+ SENSITIVE: []
128
+ end
129
+
130
+ class CancelAnnotationImportResponse < Aws::EmptyStructure
131
+ end
132
+
133
+ class CancelRunRequest
134
+ attr_accessor id: ::String
135
+ SENSITIVE: []
136
+ end
137
+
138
+ class CancelVariantImportRequest
139
+ attr_accessor job_id: ::String
140
+ SENSITIVE: []
141
+ end
142
+
143
+ class CancelVariantImportResponse < Aws::EmptyStructure
144
+ end
145
+
146
+ class CompleteMultipartReadSetUploadRequest
147
+ attr_accessor sequence_store_id: ::String
148
+ attr_accessor upload_id: ::String
149
+ attr_accessor parts: ::Array[Types::CompleteReadSetUploadPartListItem]
150
+ SENSITIVE: []
151
+ end
152
+
153
+ class CompleteMultipartReadSetUploadResponse
154
+ attr_accessor read_set_id: ::String
155
+ SENSITIVE: []
156
+ end
157
+
158
+ class CompleteReadSetUploadPartListItem
159
+ attr_accessor part_number: ::Integer
160
+ attr_accessor part_source: ("SOURCE1" | "SOURCE2")
161
+ attr_accessor checksum: ::String
162
+ SENSITIVE: []
163
+ end
164
+
165
+ class ConflictException
166
+ attr_accessor message: ::String
167
+ SENSITIVE: []
168
+ end
169
+
170
+ class CreateAnnotationStoreRequest
171
+ attr_accessor reference: Types::ReferenceItem
172
+ attr_accessor name: ::String
173
+ attr_accessor description: ::String
174
+ attr_accessor tags: ::Hash[::String, ::String]
175
+ attr_accessor version_name: ::String
176
+ attr_accessor sse_config: Types::SseConfig
177
+ attr_accessor store_format: ("GFF" | "TSV" | "VCF")
178
+ attr_accessor store_options: Types::StoreOptions
179
+ SENSITIVE: []
180
+ end
181
+
182
+ class CreateAnnotationStoreResponse
183
+ attr_accessor id: ::String
184
+ attr_accessor reference: Types::ReferenceItem
185
+ attr_accessor store_format: ("GFF" | "TSV" | "VCF")
186
+ attr_accessor store_options: Types::StoreOptions
187
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
188
+ attr_accessor name: ::String
189
+ attr_accessor version_name: ::String
190
+ attr_accessor creation_time: ::Time
191
+ SENSITIVE: []
192
+ end
193
+
194
+ class CreateAnnotationStoreVersionRequest
195
+ attr_accessor name: ::String
196
+ attr_accessor version_name: ::String
197
+ attr_accessor description: ::String
198
+ attr_accessor version_options: Types::VersionOptions
199
+ attr_accessor tags: ::Hash[::String, ::String]
200
+ SENSITIVE: []
201
+ end
202
+
203
+ class CreateAnnotationStoreVersionResponse
204
+ attr_accessor id: ::String
205
+ attr_accessor version_name: ::String
206
+ attr_accessor store_id: ::String
207
+ attr_accessor version_options: Types::VersionOptions
208
+ attr_accessor name: ::String
209
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
210
+ attr_accessor creation_time: ::Time
211
+ SENSITIVE: []
212
+ end
213
+
214
+ class CreateMultipartReadSetUploadRequest
215
+ attr_accessor sequence_store_id: ::String
216
+ attr_accessor client_token: ::String
217
+ attr_accessor source_file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
218
+ attr_accessor subject_id: ::String
219
+ attr_accessor sample_id: ::String
220
+ attr_accessor generated_from: ::String
221
+ attr_accessor reference_arn: ::String
222
+ attr_accessor name: ::String
223
+ attr_accessor description: ::String
224
+ attr_accessor tags: ::Hash[::String, ::String]
225
+ SENSITIVE: []
226
+ end
227
+
228
+ class CreateMultipartReadSetUploadResponse
229
+ attr_accessor sequence_store_id: ::String
230
+ attr_accessor upload_id: ::String
231
+ attr_accessor source_file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
232
+ attr_accessor subject_id: ::String
233
+ attr_accessor sample_id: ::String
234
+ attr_accessor generated_from: ::String
235
+ attr_accessor reference_arn: ::String
236
+ attr_accessor name: ::String
237
+ attr_accessor description: ::String
238
+ attr_accessor tags: ::Hash[::String, ::String]
239
+ attr_accessor creation_time: ::Time
240
+ SENSITIVE: []
241
+ end
242
+
243
+ class CreateReferenceStoreRequest
244
+ attr_accessor name: ::String
245
+ attr_accessor description: ::String
246
+ attr_accessor sse_config: Types::SseConfig
247
+ attr_accessor tags: ::Hash[::String, ::String]
248
+ attr_accessor client_token: ::String
249
+ SENSITIVE: []
250
+ end
251
+
252
+ class CreateReferenceStoreResponse
253
+ attr_accessor id: ::String
254
+ attr_accessor arn: ::String
255
+ attr_accessor name: ::String
256
+ attr_accessor description: ::String
257
+ attr_accessor sse_config: Types::SseConfig
258
+ attr_accessor creation_time: ::Time
259
+ SENSITIVE: []
260
+ end
261
+
262
+ class CreateRunGroupRequest
263
+ attr_accessor name: ::String
264
+ attr_accessor max_cpus: ::Integer
265
+ attr_accessor max_runs: ::Integer
266
+ attr_accessor max_duration: ::Integer
267
+ attr_accessor tags: ::Hash[::String, ::String]
268
+ attr_accessor request_id: ::String
269
+ attr_accessor max_gpus: ::Integer
270
+ SENSITIVE: []
271
+ end
272
+
273
+ class CreateRunGroupResponse
274
+ attr_accessor arn: ::String
275
+ attr_accessor id: ::String
276
+ attr_accessor tags: ::Hash[::String, ::String]
277
+ SENSITIVE: []
278
+ end
279
+
280
+ class CreateSequenceStoreRequest
281
+ attr_accessor name: ::String
282
+ attr_accessor description: ::String
283
+ attr_accessor sse_config: Types::SseConfig
284
+ attr_accessor tags: ::Hash[::String, ::String]
285
+ attr_accessor client_token: ::String
286
+ attr_accessor fallback_location: ::String
287
+ attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
288
+ SENSITIVE: []
289
+ end
290
+
291
+ class CreateSequenceStoreResponse
292
+ attr_accessor id: ::String
293
+ attr_accessor arn: ::String
294
+ attr_accessor name: ::String
295
+ attr_accessor description: ::String
296
+ attr_accessor sse_config: Types::SseConfig
297
+ attr_accessor creation_time: ::Time
298
+ attr_accessor fallback_location: ::String
299
+ attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
300
+ SENSITIVE: []
301
+ end
302
+
303
+ class CreateShareRequest
304
+ attr_accessor resource_arn: ::String
305
+ attr_accessor principal_subscriber: ::String
306
+ attr_accessor share_name: ::String
307
+ SENSITIVE: []
308
+ end
309
+
310
+ class CreateShareResponse
311
+ attr_accessor share_id: ::String
312
+ attr_accessor status: ("PENDING" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "FAILED")
313
+ attr_accessor share_name: ::String
314
+ SENSITIVE: []
315
+ end
316
+
317
+ class CreateVariantStoreRequest
318
+ attr_accessor reference: Types::ReferenceItem
319
+ attr_accessor name: ::String
320
+ attr_accessor description: ::String
321
+ attr_accessor tags: ::Hash[::String, ::String]
322
+ attr_accessor sse_config: Types::SseConfig
323
+ SENSITIVE: []
324
+ end
325
+
326
+ class CreateVariantStoreResponse
327
+ attr_accessor id: ::String
328
+ attr_accessor reference: Types::ReferenceItem
329
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
330
+ attr_accessor name: ::String
331
+ attr_accessor creation_time: ::Time
332
+ SENSITIVE: []
333
+ end
334
+
335
+ class CreateWorkflowRequest
336
+ attr_accessor name: ::String
337
+ attr_accessor description: ::String
338
+ attr_accessor engine: ("WDL" | "NEXTFLOW" | "CWL")
339
+ attr_accessor definition_zip: ::String
340
+ attr_accessor definition_uri: ::String
341
+ attr_accessor main: ::String
342
+ attr_accessor parameter_template: ::Hash[::String, Types::WorkflowParameter]
343
+ attr_accessor storage_capacity: ::Integer
344
+ attr_accessor tags: ::Hash[::String, ::String]
345
+ attr_accessor request_id: ::String
346
+ attr_accessor accelerators: ("GPU")
347
+ SENSITIVE: []
348
+ end
349
+
350
+ class CreateWorkflowResponse
351
+ attr_accessor arn: ::String
352
+ attr_accessor id: ::String
353
+ attr_accessor status: ("CREATING" | "ACTIVE" | "UPDATING" | "DELETED" | "FAILED" | "INACTIVE")
354
+ attr_accessor tags: ::Hash[::String, ::String]
355
+ SENSITIVE: []
356
+ end
357
+
358
+ class DeleteAnnotationStoreRequest
359
+ attr_accessor name: ::String
360
+ attr_accessor force: bool
361
+ SENSITIVE: []
362
+ end
363
+
364
+ class DeleteAnnotationStoreResponse
365
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
366
+ SENSITIVE: []
367
+ end
368
+
369
+ class DeleteAnnotationStoreVersionsRequest
370
+ attr_accessor name: ::String
371
+ attr_accessor versions: ::Array[::String]
372
+ attr_accessor force: bool
373
+ SENSITIVE: []
374
+ end
375
+
376
+ class DeleteAnnotationStoreVersionsResponse
377
+ attr_accessor errors: ::Array[Types::VersionDeleteError]
378
+ SENSITIVE: []
379
+ end
380
+
381
+ class DeleteReferenceRequest
382
+ attr_accessor id: ::String
383
+ attr_accessor reference_store_id: ::String
384
+ SENSITIVE: []
385
+ end
386
+
387
+ class DeleteReferenceResponse < Aws::EmptyStructure
388
+ end
389
+
390
+ class DeleteReferenceStoreRequest
391
+ attr_accessor id: ::String
392
+ SENSITIVE: []
393
+ end
394
+
395
+ class DeleteReferenceStoreResponse < Aws::EmptyStructure
396
+ end
397
+
398
+ class DeleteRunGroupRequest
399
+ attr_accessor id: ::String
400
+ SENSITIVE: []
401
+ end
402
+
403
+ class DeleteRunRequest
404
+ attr_accessor id: ::String
405
+ SENSITIVE: []
406
+ end
407
+
408
+ class DeleteSequenceStoreRequest
409
+ attr_accessor id: ::String
410
+ SENSITIVE: []
411
+ end
412
+
413
+ class DeleteSequenceStoreResponse < Aws::EmptyStructure
414
+ end
415
+
416
+ class DeleteShareRequest
417
+ attr_accessor share_id: ::String
418
+ SENSITIVE: []
419
+ end
420
+
421
+ class DeleteShareResponse
422
+ attr_accessor status: ("PENDING" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "FAILED")
423
+ SENSITIVE: []
424
+ end
425
+
426
+ class DeleteVariantStoreRequest
427
+ attr_accessor name: ::String
428
+ attr_accessor force: bool
429
+ SENSITIVE: []
430
+ end
431
+
432
+ class DeleteVariantStoreResponse
433
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
434
+ SENSITIVE: []
435
+ end
436
+
437
+ class DeleteWorkflowRequest
438
+ attr_accessor id: ::String
439
+ SENSITIVE: []
440
+ end
441
+
442
+ class ETag
443
+ attr_accessor algorithm: ("FASTQ_MD5up" | "BAM_MD5up" | "CRAM_MD5up" | "FASTQ_SHA256up" | "BAM_SHA256up" | "CRAM_SHA256up" | "FASTQ_SHA512up" | "BAM_SHA512up" | "CRAM_SHA512up")
444
+ attr_accessor source1: ::String
445
+ attr_accessor source2: ::String
446
+ SENSITIVE: []
447
+ end
448
+
449
+ class ExportReadSet
450
+ attr_accessor read_set_id: ::String
451
+ SENSITIVE: []
452
+ end
453
+
454
+ class ExportReadSetDetail
455
+ attr_accessor id: ::String
456
+ attr_accessor status: ("NOT_STARTED" | "IN_PROGRESS" | "FINISHED" | "FAILED")
457
+ attr_accessor status_message: ::String
458
+ SENSITIVE: []
459
+ end
460
+
461
+ class ExportReadSetFilter
462
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
463
+ attr_accessor created_after: ::Time
464
+ attr_accessor created_before: ::Time
465
+ SENSITIVE: []
466
+ end
467
+
468
+ class ExportReadSetJobDetail
469
+ attr_accessor id: ::String
470
+ attr_accessor sequence_store_id: ::String
471
+ attr_accessor destination: ::String
472
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
473
+ attr_accessor creation_time: ::Time
474
+ attr_accessor completion_time: ::Time
475
+ SENSITIVE: []
476
+ end
477
+
478
+ class FileInformation
479
+ attr_accessor total_parts: ::Integer
480
+ attr_accessor part_size: ::Integer
481
+ attr_accessor content_length: ::Integer
482
+ attr_accessor s3_access: Types::ReadSetS3Access
483
+ SENSITIVE: []
484
+ end
485
+
486
+ class Filter
487
+ attr_accessor resource_arns: ::Array[::String]
488
+ attr_accessor status: ::Array[("PENDING" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "FAILED")]
489
+ SENSITIVE: []
490
+ end
491
+
492
+ class FormatOptions
493
+ attr_accessor tsv_options: Types::TsvOptions
494
+ attr_accessor vcf_options: Types::VcfOptions
495
+ attr_accessor unknown: untyped
496
+ SENSITIVE: []
497
+
498
+ class TsvOptions < FormatOptions
499
+ end
500
+ class VcfOptions < FormatOptions
501
+ end
502
+ class Unknown < FormatOptions
503
+ end
504
+ end
505
+
506
+ class GetAnnotationImportRequest
507
+ attr_accessor job_id: ::String
508
+ SENSITIVE: []
509
+ end
510
+
511
+ class GetAnnotationImportResponse
512
+ attr_accessor id: ::String
513
+ attr_accessor destination_name: ::String
514
+ attr_accessor version_name: ::String
515
+ attr_accessor role_arn: ::String
516
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
517
+ attr_accessor status_message: ::String
518
+ attr_accessor creation_time: ::Time
519
+ attr_accessor update_time: ::Time
520
+ attr_accessor completion_time: ::Time
521
+ attr_accessor items: ::Array[Types::AnnotationImportItemDetail]
522
+ attr_accessor run_left_normalization: bool
523
+ attr_accessor format_options: Types::FormatOptions
524
+ attr_accessor annotation_fields: ::Hash[::String, ::String]
525
+ SENSITIVE: []
526
+ end
527
+
528
+ class GetAnnotationStoreRequest
529
+ attr_accessor name: ::String
530
+ SENSITIVE: []
531
+ end
532
+
533
+ class GetAnnotationStoreResponse
534
+ attr_accessor id: ::String
535
+ attr_accessor reference: Types::ReferenceItem
536
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
537
+ attr_accessor store_arn: ::String
538
+ attr_accessor name: ::String
539
+ attr_accessor description: ::String
540
+ attr_accessor sse_config: Types::SseConfig
541
+ attr_accessor creation_time: ::Time
542
+ attr_accessor update_time: ::Time
543
+ attr_accessor tags: ::Hash[::String, ::String]
544
+ attr_accessor store_options: Types::StoreOptions
545
+ attr_accessor store_format: ("GFF" | "TSV" | "VCF")
546
+ attr_accessor status_message: ::String
547
+ attr_accessor store_size_bytes: ::Integer
548
+ attr_accessor num_versions: ::Integer
549
+ SENSITIVE: []
550
+ end
551
+
552
+ class GetAnnotationStoreVersionRequest
553
+ attr_accessor name: ::String
554
+ attr_accessor version_name: ::String
555
+ SENSITIVE: []
556
+ end
557
+
558
+ class GetAnnotationStoreVersionResponse
559
+ attr_accessor store_id: ::String
560
+ attr_accessor id: ::String
561
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
562
+ attr_accessor version_arn: ::String
563
+ attr_accessor name: ::String
564
+ attr_accessor version_name: ::String
565
+ attr_accessor description: ::String
566
+ attr_accessor creation_time: ::Time
567
+ attr_accessor update_time: ::Time
568
+ attr_accessor tags: ::Hash[::String, ::String]
569
+ attr_accessor version_options: Types::VersionOptions
570
+ attr_accessor status_message: ::String
571
+ attr_accessor version_size_bytes: ::Integer
572
+ SENSITIVE: []
573
+ end
574
+
575
+ class GetReadSetActivationJobRequest
576
+ attr_accessor id: ::String
577
+ attr_accessor sequence_store_id: ::String
578
+ SENSITIVE: []
579
+ end
580
+
581
+ class GetReadSetActivationJobResponse
582
+ attr_accessor id: ::String
583
+ attr_accessor sequence_store_id: ::String
584
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
585
+ attr_accessor status_message: ::String
586
+ attr_accessor creation_time: ::Time
587
+ attr_accessor completion_time: ::Time
588
+ attr_accessor sources: ::Array[Types::ActivateReadSetSourceItem]
589
+ SENSITIVE: []
590
+ end
591
+
592
+ class GetReadSetExportJobRequest
593
+ attr_accessor sequence_store_id: ::String
594
+ attr_accessor id: ::String
595
+ SENSITIVE: []
596
+ end
597
+
598
+ class GetReadSetExportJobResponse
599
+ attr_accessor id: ::String
600
+ attr_accessor sequence_store_id: ::String
601
+ attr_accessor destination: ::String
602
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
603
+ attr_accessor status_message: ::String
604
+ attr_accessor creation_time: ::Time
605
+ attr_accessor completion_time: ::Time
606
+ attr_accessor read_sets: ::Array[Types::ExportReadSetDetail]
607
+ SENSITIVE: []
608
+ end
609
+
610
+ class GetReadSetImportJobRequest
611
+ attr_accessor id: ::String
612
+ attr_accessor sequence_store_id: ::String
613
+ SENSITIVE: []
614
+ end
615
+
616
+ class GetReadSetImportJobResponse
617
+ attr_accessor id: ::String
618
+ attr_accessor sequence_store_id: ::String
619
+ attr_accessor role_arn: ::String
620
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
621
+ attr_accessor status_message: ::String
622
+ attr_accessor creation_time: ::Time
623
+ attr_accessor completion_time: ::Time
624
+ attr_accessor sources: ::Array[Types::ImportReadSetSourceItem]
625
+ SENSITIVE: []
626
+ end
627
+
628
+ class GetReadSetMetadataRequest
629
+ attr_accessor id: ::String
630
+ attr_accessor sequence_store_id: ::String
631
+ SENSITIVE: []
632
+ end
633
+
634
+ class GetReadSetMetadataResponse
635
+ attr_accessor id: ::String
636
+ attr_accessor arn: ::String
637
+ attr_accessor sequence_store_id: ::String
638
+ attr_accessor subject_id: ::String
639
+ attr_accessor sample_id: ::String
640
+ attr_accessor status: ("ARCHIVED" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "PROCESSING_UPLOAD" | "UPLOAD_FAILED")
641
+ attr_accessor name: ::String
642
+ attr_accessor description: ::String
643
+ attr_accessor file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
644
+ attr_accessor creation_time: ::Time
645
+ attr_accessor sequence_information: Types::SequenceInformation
646
+ attr_accessor reference_arn: ::String
647
+ attr_accessor files: Types::ReadSetFiles
648
+ attr_accessor status_message: ::String
649
+ attr_accessor creation_type: ("IMPORT" | "UPLOAD")
650
+ attr_accessor etag: Types::ETag
651
+ SENSITIVE: []
652
+ end
653
+
654
+ class GetReadSetRequest
655
+ attr_accessor id: ::String
656
+ attr_accessor sequence_store_id: ::String
657
+ attr_accessor file: ("SOURCE1" | "SOURCE2" | "INDEX")
658
+ attr_accessor part_number: ::Integer
659
+ SENSITIVE: []
660
+ end
661
+
662
+ class GetReadSetResponse
663
+ attr_accessor payload: ::IO
664
+ SENSITIVE: []
665
+ end
666
+
667
+ class GetReferenceImportJobRequest
668
+ attr_accessor id: ::String
669
+ attr_accessor reference_store_id: ::String
670
+ SENSITIVE: []
671
+ end
672
+
673
+ class GetReferenceImportJobResponse
674
+ attr_accessor id: ::String
675
+ attr_accessor reference_store_id: ::String
676
+ attr_accessor role_arn: ::String
677
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
678
+ attr_accessor status_message: ::String
679
+ attr_accessor creation_time: ::Time
680
+ attr_accessor completion_time: ::Time
681
+ attr_accessor sources: ::Array[Types::ImportReferenceSourceItem]
682
+ SENSITIVE: []
683
+ end
684
+
685
+ class GetReferenceMetadataRequest
686
+ attr_accessor id: ::String
687
+ attr_accessor reference_store_id: ::String
688
+ SENSITIVE: []
689
+ end
690
+
691
+ class GetReferenceMetadataResponse
692
+ attr_accessor id: ::String
693
+ attr_accessor arn: ::String
694
+ attr_accessor reference_store_id: ::String
695
+ attr_accessor md5: ::String
696
+ attr_accessor status: ("ACTIVE" | "DELETING" | "DELETED")
697
+ attr_accessor name: ::String
698
+ attr_accessor description: ::String
699
+ attr_accessor creation_time: ::Time
700
+ attr_accessor update_time: ::Time
701
+ attr_accessor files: Types::ReferenceFiles
702
+ SENSITIVE: []
703
+ end
704
+
705
+ class GetReferenceRequest
706
+ attr_accessor id: ::String
707
+ attr_accessor reference_store_id: ::String
708
+ attr_accessor range: ::String
709
+ attr_accessor part_number: ::Integer
710
+ attr_accessor file: ("SOURCE" | "INDEX")
711
+ SENSITIVE: []
712
+ end
713
+
714
+ class GetReferenceResponse
715
+ attr_accessor payload: ::IO
716
+ SENSITIVE: []
717
+ end
718
+
719
+ class GetReferenceStoreRequest
720
+ attr_accessor id: ::String
721
+ SENSITIVE: []
722
+ end
723
+
724
+ class GetReferenceStoreResponse
725
+ attr_accessor id: ::String
726
+ attr_accessor arn: ::String
727
+ attr_accessor name: ::String
728
+ attr_accessor description: ::String
729
+ attr_accessor sse_config: Types::SseConfig
730
+ attr_accessor creation_time: ::Time
731
+ SENSITIVE: []
732
+ end
733
+
734
+ class GetRunGroupRequest
735
+ attr_accessor id: ::String
736
+ SENSITIVE: []
737
+ end
738
+
739
+ class GetRunGroupResponse
740
+ attr_accessor arn: ::String
741
+ attr_accessor id: ::String
742
+ attr_accessor name: ::String
743
+ attr_accessor max_cpus: ::Integer
744
+ attr_accessor max_runs: ::Integer
745
+ attr_accessor max_duration: ::Integer
746
+ attr_accessor creation_time: ::Time
747
+ attr_accessor tags: ::Hash[::String, ::String]
748
+ attr_accessor max_gpus: ::Integer
749
+ SENSITIVE: []
750
+ end
751
+
752
+ class GetRunRequest
753
+ attr_accessor id: ::String
754
+ attr_accessor export: ::Array[("DEFINITION")]
755
+ SENSITIVE: []
756
+ end
757
+
758
+ class GetRunResponse
759
+ attr_accessor arn: ::String
760
+ attr_accessor id: ::String
761
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "DELETED" | "CANCELLED" | "FAILED")
762
+ attr_accessor workflow_id: ::String
763
+ attr_accessor workflow_type: ("PRIVATE" | "READY2RUN")
764
+ attr_accessor run_id: ::String
765
+ attr_accessor role_arn: ::String
766
+ attr_accessor name: ::String
767
+ attr_accessor run_group_id: ::String
768
+ attr_accessor priority: ::Integer
769
+ attr_accessor definition: ::String
770
+ attr_accessor digest: ::String
771
+ attr_accessor parameters: untyped
772
+ attr_accessor storage_capacity: ::Integer
773
+ attr_accessor output_uri: ::String
774
+ attr_accessor log_level: ("OFF" | "FATAL" | "ERROR" | "ALL")
775
+ attr_accessor resource_digests: ::Hash[::String, ::String]
776
+ attr_accessor started_by: ::String
777
+ attr_accessor creation_time: ::Time
778
+ attr_accessor start_time: ::Time
779
+ attr_accessor stop_time: ::Time
780
+ attr_accessor status_message: ::String
781
+ attr_accessor tags: ::Hash[::String, ::String]
782
+ attr_accessor accelerators: ("GPU")
783
+ attr_accessor retention_mode: ("RETAIN" | "REMOVE")
784
+ attr_accessor failure_reason: ::String
785
+ attr_accessor log_location: Types::RunLogLocation
786
+ attr_accessor uuid: ::String
787
+ attr_accessor run_output_uri: ::String
788
+ SENSITIVE: []
789
+ end
790
+
791
+ class GetRunTaskRequest
792
+ attr_accessor id: ::String
793
+ attr_accessor task_id: ::String
794
+ SENSITIVE: []
795
+ end
796
+
797
+ class GetRunTaskResponse
798
+ attr_accessor task_id: ::String
799
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "CANCELLED" | "FAILED")
800
+ attr_accessor name: ::String
801
+ attr_accessor cpus: ::Integer
802
+ attr_accessor memory: ::Integer
803
+ attr_accessor creation_time: ::Time
804
+ attr_accessor start_time: ::Time
805
+ attr_accessor stop_time: ::Time
806
+ attr_accessor status_message: ::String
807
+ attr_accessor log_stream: ::String
808
+ attr_accessor gpus: ::Integer
809
+ attr_accessor instance_type: ::String
810
+ attr_accessor failure_reason: ::String
811
+ SENSITIVE: []
812
+ end
813
+
814
+ class GetSequenceStoreRequest
815
+ attr_accessor id: ::String
816
+ SENSITIVE: []
817
+ end
818
+
819
+ class GetSequenceStoreResponse
820
+ attr_accessor id: ::String
821
+ attr_accessor arn: ::String
822
+ attr_accessor name: ::String
823
+ attr_accessor description: ::String
824
+ attr_accessor sse_config: Types::SseConfig
825
+ attr_accessor creation_time: ::Time
826
+ attr_accessor fallback_location: ::String
827
+ attr_accessor s3_access: Types::SequenceStoreS3Access
828
+ attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
829
+ SENSITIVE: []
830
+ end
831
+
832
+ class GetShareRequest
833
+ attr_accessor share_id: ::String
834
+ SENSITIVE: []
835
+ end
836
+
837
+ class GetShareResponse
838
+ attr_accessor share: Types::ShareDetails
839
+ SENSITIVE: []
840
+ end
841
+
842
+ class GetVariantImportRequest
843
+ attr_accessor job_id: ::String
844
+ SENSITIVE: []
845
+ end
846
+
847
+ class GetVariantImportResponse
848
+ attr_accessor id: ::String
849
+ attr_accessor destination_name: ::String
850
+ attr_accessor role_arn: ::String
851
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
852
+ attr_accessor status_message: ::String
853
+ attr_accessor creation_time: ::Time
854
+ attr_accessor update_time: ::Time
855
+ attr_accessor completion_time: ::Time
856
+ attr_accessor items: ::Array[Types::VariantImportItemDetail]
857
+ attr_accessor run_left_normalization: bool
858
+ attr_accessor annotation_fields: ::Hash[::String, ::String]
859
+ SENSITIVE: []
860
+ end
861
+
862
+ class GetVariantStoreRequest
863
+ attr_accessor name: ::String
864
+ SENSITIVE: []
865
+ end
866
+
867
+ class GetVariantStoreResponse
868
+ attr_accessor id: ::String
869
+ attr_accessor reference: Types::ReferenceItem
870
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
871
+ attr_accessor store_arn: ::String
872
+ attr_accessor name: ::String
873
+ attr_accessor description: ::String
874
+ attr_accessor sse_config: Types::SseConfig
875
+ attr_accessor creation_time: ::Time
876
+ attr_accessor update_time: ::Time
877
+ attr_accessor tags: ::Hash[::String, ::String]
878
+ attr_accessor status_message: ::String
879
+ attr_accessor store_size_bytes: ::Integer
880
+ SENSITIVE: []
881
+ end
882
+
883
+ class GetWorkflowRequest
884
+ attr_accessor id: ::String
885
+ attr_accessor type: ("PRIVATE" | "READY2RUN")
886
+ attr_accessor export: ::Array[("DEFINITION")]
887
+ SENSITIVE: []
888
+ end
889
+
890
+ class GetWorkflowResponse
891
+ attr_accessor arn: ::String
892
+ attr_accessor id: ::String
893
+ attr_accessor status: ("CREATING" | "ACTIVE" | "UPDATING" | "DELETED" | "FAILED" | "INACTIVE")
894
+ attr_accessor type: ("PRIVATE" | "READY2RUN")
895
+ attr_accessor name: ::String
896
+ attr_accessor description: ::String
897
+ attr_accessor engine: ("WDL" | "NEXTFLOW" | "CWL")
898
+ attr_accessor definition: ::String
899
+ attr_accessor main: ::String
900
+ attr_accessor digest: ::String
901
+ attr_accessor parameter_template: ::Hash[::String, Types::WorkflowParameter]
902
+ attr_accessor storage_capacity: ::Integer
903
+ attr_accessor creation_time: ::Time
904
+ attr_accessor status_message: ::String
905
+ attr_accessor tags: ::Hash[::String, ::String]
906
+ attr_accessor metadata: ::Hash[::String, ::String]
907
+ attr_accessor accelerators: ("GPU")
908
+ SENSITIVE: []
909
+ end
910
+
911
+ class ImportReadSetFilter
912
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
913
+ attr_accessor created_after: ::Time
914
+ attr_accessor created_before: ::Time
915
+ SENSITIVE: []
916
+ end
917
+
918
+ class ImportReadSetJobItem
919
+ attr_accessor id: ::String
920
+ attr_accessor sequence_store_id: ::String
921
+ attr_accessor role_arn: ::String
922
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
923
+ attr_accessor creation_time: ::Time
924
+ attr_accessor completion_time: ::Time
925
+ SENSITIVE: []
926
+ end
927
+
928
+ class ImportReadSetSourceItem
929
+ attr_accessor source_files: Types::SourceFiles
930
+ attr_accessor source_file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
931
+ attr_accessor status: ("NOT_STARTED" | "IN_PROGRESS" | "FINISHED" | "FAILED")
932
+ attr_accessor status_message: ::String
933
+ attr_accessor subject_id: ::String
934
+ attr_accessor sample_id: ::String
935
+ attr_accessor generated_from: ::String
936
+ attr_accessor reference_arn: ::String
937
+ attr_accessor name: ::String
938
+ attr_accessor description: ::String
939
+ attr_accessor tags: ::Hash[::String, ::String]
940
+ SENSITIVE: []
941
+ end
942
+
943
+ class ImportReferenceFilter
944
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
945
+ attr_accessor created_after: ::Time
946
+ attr_accessor created_before: ::Time
947
+ SENSITIVE: []
948
+ end
949
+
950
+ class ImportReferenceJobItem
951
+ attr_accessor id: ::String
952
+ attr_accessor reference_store_id: ::String
953
+ attr_accessor role_arn: ::String
954
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
955
+ attr_accessor creation_time: ::Time
956
+ attr_accessor completion_time: ::Time
957
+ SENSITIVE: []
958
+ end
959
+
960
+ class ImportReferenceSourceItem
961
+ attr_accessor source_file: ::String
962
+ attr_accessor status: ("NOT_STARTED" | "IN_PROGRESS" | "FINISHED" | "FAILED")
963
+ attr_accessor status_message: ::String
964
+ attr_accessor name: ::String
965
+ attr_accessor description: ::String
966
+ attr_accessor tags: ::Hash[::String, ::String]
967
+ SENSITIVE: []
968
+ end
969
+
970
+ class InternalServerException
971
+ attr_accessor message: ::String
972
+ SENSITIVE: []
973
+ end
974
+
975
+ class ListAnnotationImportJobsFilter
976
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
977
+ attr_accessor store_name: ::String
978
+ SENSITIVE: []
979
+ end
980
+
981
+ class ListAnnotationImportJobsRequest
982
+ attr_accessor max_results: ::Integer
983
+ attr_accessor ids: ::Array[::String]
984
+ attr_accessor next_token: ::String
985
+ attr_accessor filter: Types::ListAnnotationImportJobsFilter
986
+ SENSITIVE: []
987
+ end
988
+
989
+ class ListAnnotationImportJobsResponse
990
+ attr_accessor annotation_import_jobs: ::Array[Types::AnnotationImportJobItem]
991
+ attr_accessor next_token: ::String
992
+ SENSITIVE: []
993
+ end
994
+
995
+ class ListAnnotationStoreVersionsFilter
996
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
997
+ SENSITIVE: []
998
+ end
999
+
1000
+ class ListAnnotationStoreVersionsRequest
1001
+ attr_accessor name: ::String
1002
+ attr_accessor max_results: ::Integer
1003
+ attr_accessor next_token: ::String
1004
+ attr_accessor filter: Types::ListAnnotationStoreVersionsFilter
1005
+ SENSITIVE: []
1006
+ end
1007
+
1008
+ class ListAnnotationStoreVersionsResponse
1009
+ attr_accessor annotation_store_versions: ::Array[Types::AnnotationStoreVersionItem]
1010
+ attr_accessor next_token: ::String
1011
+ SENSITIVE: []
1012
+ end
1013
+
1014
+ class ListAnnotationStoresFilter
1015
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
1016
+ SENSITIVE: []
1017
+ end
1018
+
1019
+ class ListAnnotationStoresRequest
1020
+ attr_accessor ids: ::Array[::String]
1021
+ attr_accessor max_results: ::Integer
1022
+ attr_accessor next_token: ::String
1023
+ attr_accessor filter: Types::ListAnnotationStoresFilter
1024
+ SENSITIVE: []
1025
+ end
1026
+
1027
+ class ListAnnotationStoresResponse
1028
+ attr_accessor annotation_stores: ::Array[Types::AnnotationStoreItem]
1029
+ attr_accessor next_token: ::String
1030
+ SENSITIVE: []
1031
+ end
1032
+
1033
+ class ListMultipartReadSetUploadsRequest
1034
+ attr_accessor sequence_store_id: ::String
1035
+ attr_accessor max_results: ::Integer
1036
+ attr_accessor next_token: ::String
1037
+ SENSITIVE: []
1038
+ end
1039
+
1040
+ class ListMultipartReadSetUploadsResponse
1041
+ attr_accessor next_token: ::String
1042
+ attr_accessor uploads: ::Array[Types::MultipartReadSetUploadListItem]
1043
+ SENSITIVE: []
1044
+ end
1045
+
1046
+ class ListReadSetActivationJobsRequest
1047
+ attr_accessor sequence_store_id: ::String
1048
+ attr_accessor max_results: ::Integer
1049
+ attr_accessor next_token: ::String
1050
+ attr_accessor filter: Types::ActivateReadSetFilter
1051
+ SENSITIVE: []
1052
+ end
1053
+
1054
+ class ListReadSetActivationJobsResponse
1055
+ attr_accessor next_token: ::String
1056
+ attr_accessor activation_jobs: ::Array[Types::ActivateReadSetJobItem]
1057
+ SENSITIVE: []
1058
+ end
1059
+
1060
+ class ListReadSetExportJobsRequest
1061
+ attr_accessor sequence_store_id: ::String
1062
+ attr_accessor max_results: ::Integer
1063
+ attr_accessor next_token: ::String
1064
+ attr_accessor filter: Types::ExportReadSetFilter
1065
+ SENSITIVE: []
1066
+ end
1067
+
1068
+ class ListReadSetExportJobsResponse
1069
+ attr_accessor next_token: ::String
1070
+ attr_accessor export_jobs: ::Array[Types::ExportReadSetJobDetail]
1071
+ SENSITIVE: []
1072
+ end
1073
+
1074
+ class ListReadSetImportJobsRequest
1075
+ attr_accessor max_results: ::Integer
1076
+ attr_accessor next_token: ::String
1077
+ attr_accessor sequence_store_id: ::String
1078
+ attr_accessor filter: Types::ImportReadSetFilter
1079
+ SENSITIVE: []
1080
+ end
1081
+
1082
+ class ListReadSetImportJobsResponse
1083
+ attr_accessor next_token: ::String
1084
+ attr_accessor import_jobs: ::Array[Types::ImportReadSetJobItem]
1085
+ SENSITIVE: []
1086
+ end
1087
+
1088
+ class ListReadSetUploadPartsRequest
1089
+ attr_accessor sequence_store_id: ::String
1090
+ attr_accessor upload_id: ::String
1091
+ attr_accessor part_source: ("SOURCE1" | "SOURCE2")
1092
+ attr_accessor max_results: ::Integer
1093
+ attr_accessor next_token: ::String
1094
+ attr_accessor filter: Types::ReadSetUploadPartListFilter
1095
+ SENSITIVE: []
1096
+ end
1097
+
1098
+ class ListReadSetUploadPartsResponse
1099
+ attr_accessor next_token: ::String
1100
+ attr_accessor parts: ::Array[Types::ReadSetUploadPartListItem]
1101
+ SENSITIVE: []
1102
+ end
1103
+
1104
+ class ListReadSetsRequest
1105
+ attr_accessor sequence_store_id: ::String
1106
+ attr_accessor max_results: ::Integer
1107
+ attr_accessor next_token: ::String
1108
+ attr_accessor filter: Types::ReadSetFilter
1109
+ SENSITIVE: []
1110
+ end
1111
+
1112
+ class ListReadSetsResponse
1113
+ attr_accessor next_token: ::String
1114
+ attr_accessor read_sets: ::Array[Types::ReadSetListItem]
1115
+ SENSITIVE: []
1116
+ end
1117
+
1118
+ class ListReferenceImportJobsRequest
1119
+ attr_accessor max_results: ::Integer
1120
+ attr_accessor next_token: ::String
1121
+ attr_accessor reference_store_id: ::String
1122
+ attr_accessor filter: Types::ImportReferenceFilter
1123
+ SENSITIVE: []
1124
+ end
1125
+
1126
+ class ListReferenceImportJobsResponse
1127
+ attr_accessor next_token: ::String
1128
+ attr_accessor import_jobs: ::Array[Types::ImportReferenceJobItem]
1129
+ SENSITIVE: []
1130
+ end
1131
+
1132
+ class ListReferenceStoresRequest
1133
+ attr_accessor max_results: ::Integer
1134
+ attr_accessor next_token: ::String
1135
+ attr_accessor filter: Types::ReferenceStoreFilter
1136
+ SENSITIVE: []
1137
+ end
1138
+
1139
+ class ListReferenceStoresResponse
1140
+ attr_accessor next_token: ::String
1141
+ attr_accessor reference_stores: ::Array[Types::ReferenceStoreDetail]
1142
+ SENSITIVE: []
1143
+ end
1144
+
1145
+ class ListReferencesRequest
1146
+ attr_accessor reference_store_id: ::String
1147
+ attr_accessor max_results: ::Integer
1148
+ attr_accessor next_token: ::String
1149
+ attr_accessor filter: Types::ReferenceFilter
1150
+ SENSITIVE: []
1151
+ end
1152
+
1153
+ class ListReferencesResponse
1154
+ attr_accessor next_token: ::String
1155
+ attr_accessor references: ::Array[Types::ReferenceListItem]
1156
+ SENSITIVE: []
1157
+ end
1158
+
1159
+ class ListRunGroupsRequest
1160
+ attr_accessor name: ::String
1161
+ attr_accessor starting_token: ::String
1162
+ attr_accessor max_results: ::Integer
1163
+ SENSITIVE: []
1164
+ end
1165
+
1166
+ class ListRunGroupsResponse
1167
+ attr_accessor items: ::Array[Types::RunGroupListItem]
1168
+ attr_accessor next_token: ::String
1169
+ SENSITIVE: []
1170
+ end
1171
+
1172
+ class ListRunTasksRequest
1173
+ attr_accessor id: ::String
1174
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "CANCELLED" | "FAILED")
1175
+ attr_accessor starting_token: ::String
1176
+ attr_accessor max_results: ::Integer
1177
+ SENSITIVE: []
1178
+ end
1179
+
1180
+ class ListRunTasksResponse
1181
+ attr_accessor items: ::Array[Types::TaskListItem]
1182
+ attr_accessor next_token: ::String
1183
+ SENSITIVE: []
1184
+ end
1185
+
1186
+ class ListRunsRequest
1187
+ attr_accessor name: ::String
1188
+ attr_accessor run_group_id: ::String
1189
+ attr_accessor starting_token: ::String
1190
+ attr_accessor max_results: ::Integer
1191
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "DELETED" | "CANCELLED" | "FAILED")
1192
+ SENSITIVE: []
1193
+ end
1194
+
1195
+ class ListRunsResponse
1196
+ attr_accessor items: ::Array[Types::RunListItem]
1197
+ attr_accessor next_token: ::String
1198
+ SENSITIVE: []
1199
+ end
1200
+
1201
+ class ListSequenceStoresRequest
1202
+ attr_accessor max_results: ::Integer
1203
+ attr_accessor next_token: ::String
1204
+ attr_accessor filter: Types::SequenceStoreFilter
1205
+ SENSITIVE: []
1206
+ end
1207
+
1208
+ class ListSequenceStoresResponse
1209
+ attr_accessor next_token: ::String
1210
+ attr_accessor sequence_stores: ::Array[Types::SequenceStoreDetail]
1211
+ SENSITIVE: []
1212
+ end
1213
+
1214
+ class ListSharesRequest
1215
+ attr_accessor resource_owner: ("SELF" | "OTHER")
1216
+ attr_accessor filter: Types::Filter
1217
+ attr_accessor next_token: ::String
1218
+ attr_accessor max_results: ::Integer
1219
+ SENSITIVE: []
1220
+ end
1221
+
1222
+ class ListSharesResponse
1223
+ attr_accessor shares: ::Array[Types::ShareDetails]
1224
+ attr_accessor next_token: ::String
1225
+ SENSITIVE: []
1226
+ end
1227
+
1228
+ class ListTagsForResourceRequest
1229
+ attr_accessor resource_arn: ::String
1230
+ SENSITIVE: []
1231
+ end
1232
+
1233
+ class ListTagsForResourceResponse
1234
+ attr_accessor tags: ::Hash[::String, ::String]
1235
+ SENSITIVE: []
1236
+ end
1237
+
1238
+ class ListVariantImportJobsFilter
1239
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
1240
+ attr_accessor store_name: ::String
1241
+ SENSITIVE: []
1242
+ end
1243
+
1244
+ class ListVariantImportJobsRequest
1245
+ attr_accessor max_results: ::Integer
1246
+ attr_accessor ids: ::Array[::String]
1247
+ attr_accessor next_token: ::String
1248
+ attr_accessor filter: Types::ListVariantImportJobsFilter
1249
+ SENSITIVE: []
1250
+ end
1251
+
1252
+ class ListVariantImportJobsResponse
1253
+ attr_accessor variant_import_jobs: ::Array[Types::VariantImportJobItem]
1254
+ attr_accessor next_token: ::String
1255
+ SENSITIVE: []
1256
+ end
1257
+
1258
+ class ListVariantStoresFilter
1259
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
1260
+ SENSITIVE: []
1261
+ end
1262
+
1263
+ class ListVariantStoresRequest
1264
+ attr_accessor max_results: ::Integer
1265
+ attr_accessor ids: ::Array[::String]
1266
+ attr_accessor next_token: ::String
1267
+ attr_accessor filter: Types::ListVariantStoresFilter
1268
+ SENSITIVE: []
1269
+ end
1270
+
1271
+ class ListVariantStoresResponse
1272
+ attr_accessor variant_stores: ::Array[Types::VariantStoreItem]
1273
+ attr_accessor next_token: ::String
1274
+ SENSITIVE: []
1275
+ end
1276
+
1277
+ class ListWorkflowsRequest
1278
+ attr_accessor type: ("PRIVATE" | "READY2RUN")
1279
+ attr_accessor name: ::String
1280
+ attr_accessor starting_token: ::String
1281
+ attr_accessor max_results: ::Integer
1282
+ SENSITIVE: []
1283
+ end
1284
+
1285
+ class ListWorkflowsResponse
1286
+ attr_accessor items: ::Array[Types::WorkflowListItem]
1287
+ attr_accessor next_token: ::String
1288
+ SENSITIVE: []
1289
+ end
1290
+
1291
+ class MultipartReadSetUploadListItem
1292
+ attr_accessor sequence_store_id: ::String
1293
+ attr_accessor upload_id: ::String
1294
+ attr_accessor source_file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
1295
+ attr_accessor subject_id: ::String
1296
+ attr_accessor sample_id: ::String
1297
+ attr_accessor generated_from: ::String
1298
+ attr_accessor reference_arn: ::String
1299
+ attr_accessor name: ::String
1300
+ attr_accessor description: ::String
1301
+ attr_accessor tags: ::Hash[::String, ::String]
1302
+ attr_accessor creation_time: ::Time
1303
+ SENSITIVE: []
1304
+ end
1305
+
1306
+ class NotSupportedOperationException
1307
+ attr_accessor message: ::String
1308
+ SENSITIVE: []
1309
+ end
1310
+
1311
+ class RangeNotSatisfiableException
1312
+ attr_accessor message: ::String
1313
+ SENSITIVE: []
1314
+ end
1315
+
1316
+ class ReadOptions
1317
+ attr_accessor sep: ::String
1318
+ attr_accessor encoding: ::String
1319
+ attr_accessor quote: ::String
1320
+ attr_accessor quote_all: bool
1321
+ attr_accessor escape: ::String
1322
+ attr_accessor escape_quotes: bool
1323
+ attr_accessor comment: ::String
1324
+ attr_accessor header: bool
1325
+ attr_accessor line_sep: ::String
1326
+ SENSITIVE: []
1327
+ end
1328
+
1329
+ class ReadSetBatchError
1330
+ attr_accessor id: ::String
1331
+ attr_accessor code: ::String
1332
+ attr_accessor message: ::String
1333
+ SENSITIVE: []
1334
+ end
1335
+
1336
+ class ReadSetFiles
1337
+ attr_accessor source1: Types::FileInformation
1338
+ attr_accessor source2: Types::FileInformation
1339
+ attr_accessor index: Types::FileInformation
1340
+ SENSITIVE: []
1341
+ end
1342
+
1343
+ class ReadSetFilter
1344
+ attr_accessor name: ::String
1345
+ attr_accessor status: ("ARCHIVED" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "PROCESSING_UPLOAD" | "UPLOAD_FAILED")
1346
+ attr_accessor reference_arn: ::String
1347
+ attr_accessor created_after: ::Time
1348
+ attr_accessor created_before: ::Time
1349
+ attr_accessor sample_id: ::String
1350
+ attr_accessor subject_id: ::String
1351
+ attr_accessor generated_from: ::String
1352
+ attr_accessor creation_type: ("IMPORT" | "UPLOAD")
1353
+ SENSITIVE: []
1354
+ end
1355
+
1356
+ class ReadSetListItem
1357
+ attr_accessor id: ::String
1358
+ attr_accessor arn: ::String
1359
+ attr_accessor sequence_store_id: ::String
1360
+ attr_accessor subject_id: ::String
1361
+ attr_accessor sample_id: ::String
1362
+ attr_accessor status: ("ARCHIVED" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "PROCESSING_UPLOAD" | "UPLOAD_FAILED")
1363
+ attr_accessor name: ::String
1364
+ attr_accessor description: ::String
1365
+ attr_accessor reference_arn: ::String
1366
+ attr_accessor file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
1367
+ attr_accessor sequence_information: Types::SequenceInformation
1368
+ attr_accessor creation_time: ::Time
1369
+ attr_accessor status_message: ::String
1370
+ attr_accessor creation_type: ("IMPORT" | "UPLOAD")
1371
+ attr_accessor etag: Types::ETag
1372
+ SENSITIVE: []
1373
+ end
1374
+
1375
+ class ReadSetS3Access
1376
+ attr_accessor s3_uri: ::String
1377
+ SENSITIVE: []
1378
+ end
1379
+
1380
+ class ReadSetUploadPartListFilter
1381
+ attr_accessor created_after: ::Time
1382
+ attr_accessor created_before: ::Time
1383
+ SENSITIVE: []
1384
+ end
1385
+
1386
+ class ReadSetUploadPartListItem
1387
+ attr_accessor part_number: ::Integer
1388
+ attr_accessor part_size: ::Integer
1389
+ attr_accessor part_source: ("SOURCE1" | "SOURCE2")
1390
+ attr_accessor checksum: ::String
1391
+ attr_accessor creation_time: ::Time
1392
+ attr_accessor last_updated_time: ::Time
1393
+ SENSITIVE: []
1394
+ end
1395
+
1396
+ class ReferenceFiles
1397
+ attr_accessor source: Types::FileInformation
1398
+ attr_accessor index: Types::FileInformation
1399
+ SENSITIVE: []
1400
+ end
1401
+
1402
+ class ReferenceFilter
1403
+ attr_accessor name: ::String
1404
+ attr_accessor md5: ::String
1405
+ attr_accessor created_after: ::Time
1406
+ attr_accessor created_before: ::Time
1407
+ SENSITIVE: []
1408
+ end
1409
+
1410
+ class ReferenceItem
1411
+ attr_accessor reference_arn: ::String
1412
+ attr_accessor unknown: untyped
1413
+ SENSITIVE: []
1414
+
1415
+ class ReferenceArn < ReferenceItem
1416
+ end
1417
+ class Unknown < ReferenceItem
1418
+ end
1419
+ end
1420
+
1421
+ class ReferenceListItem
1422
+ attr_accessor id: ::String
1423
+ attr_accessor arn: ::String
1424
+ attr_accessor reference_store_id: ::String
1425
+ attr_accessor md5: ::String
1426
+ attr_accessor status: ("ACTIVE" | "DELETING" | "DELETED")
1427
+ attr_accessor name: ::String
1428
+ attr_accessor description: ::String
1429
+ attr_accessor creation_time: ::Time
1430
+ attr_accessor update_time: ::Time
1431
+ SENSITIVE: []
1432
+ end
1433
+
1434
+ class ReferenceStoreDetail
1435
+ attr_accessor arn: ::String
1436
+ attr_accessor id: ::String
1437
+ attr_accessor name: ::String
1438
+ attr_accessor description: ::String
1439
+ attr_accessor sse_config: Types::SseConfig
1440
+ attr_accessor creation_time: ::Time
1441
+ SENSITIVE: []
1442
+ end
1443
+
1444
+ class ReferenceStoreFilter
1445
+ attr_accessor name: ::String
1446
+ attr_accessor created_after: ::Time
1447
+ attr_accessor created_before: ::Time
1448
+ SENSITIVE: []
1449
+ end
1450
+
1451
+ class RequestTimeoutException
1452
+ attr_accessor message: ::String
1453
+ SENSITIVE: []
1454
+ end
1455
+
1456
+ class ResourceNotFoundException
1457
+ attr_accessor message: ::String
1458
+ SENSITIVE: []
1459
+ end
1460
+
1461
+ class RunGroupListItem
1462
+ attr_accessor arn: ::String
1463
+ attr_accessor id: ::String
1464
+ attr_accessor name: ::String
1465
+ attr_accessor max_cpus: ::Integer
1466
+ attr_accessor max_runs: ::Integer
1467
+ attr_accessor max_duration: ::Integer
1468
+ attr_accessor creation_time: ::Time
1469
+ attr_accessor max_gpus: ::Integer
1470
+ SENSITIVE: []
1471
+ end
1472
+
1473
+ class RunListItem
1474
+ attr_accessor arn: ::String
1475
+ attr_accessor id: ::String
1476
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "DELETED" | "CANCELLED" | "FAILED")
1477
+ attr_accessor workflow_id: ::String
1478
+ attr_accessor name: ::String
1479
+ attr_accessor priority: ::Integer
1480
+ attr_accessor storage_capacity: ::Integer
1481
+ attr_accessor creation_time: ::Time
1482
+ attr_accessor start_time: ::Time
1483
+ attr_accessor stop_time: ::Time
1484
+ SENSITIVE: []
1485
+ end
1486
+
1487
+ class RunLogLocation
1488
+ attr_accessor engine_log_stream: ::String
1489
+ attr_accessor run_log_stream: ::String
1490
+ SENSITIVE: []
1491
+ end
1492
+
1493
+ class SequenceInformation
1494
+ attr_accessor total_read_count: ::Integer
1495
+ attr_accessor total_base_count: ::Integer
1496
+ attr_accessor generated_from: ::String
1497
+ attr_accessor alignment: ::String
1498
+ SENSITIVE: []
1499
+ end
1500
+
1501
+ class SequenceStoreDetail
1502
+ attr_accessor arn: ::String
1503
+ attr_accessor id: ::String
1504
+ attr_accessor name: ::String
1505
+ attr_accessor description: ::String
1506
+ attr_accessor sse_config: Types::SseConfig
1507
+ attr_accessor creation_time: ::Time
1508
+ attr_accessor fallback_location: ::String
1509
+ attr_accessor e_tag_algorithm_family: ("MD5up" | "SHA256up" | "SHA512up")
1510
+ SENSITIVE: []
1511
+ end
1512
+
1513
+ class SequenceStoreFilter
1514
+ attr_accessor name: ::String
1515
+ attr_accessor created_after: ::Time
1516
+ attr_accessor created_before: ::Time
1517
+ SENSITIVE: []
1518
+ end
1519
+
1520
+ class SequenceStoreS3Access
1521
+ attr_accessor s3_uri: ::String
1522
+ attr_accessor s3_access_point_arn: ::String
1523
+ SENSITIVE: []
1524
+ end
1525
+
1526
+ class ServiceQuotaExceededException
1527
+ attr_accessor message: ::String
1528
+ SENSITIVE: []
1529
+ end
1530
+
1531
+ class ShareDetails
1532
+ attr_accessor share_id: ::String
1533
+ attr_accessor resource_arn: ::String
1534
+ attr_accessor principal_subscriber: ::String
1535
+ attr_accessor owner_id: ::String
1536
+ attr_accessor status: ("PENDING" | "ACTIVATING" | "ACTIVE" | "DELETING" | "DELETED" | "FAILED")
1537
+ attr_accessor status_message: ::String
1538
+ attr_accessor share_name: ::String
1539
+ attr_accessor creation_time: ::Time
1540
+ attr_accessor update_time: ::Time
1541
+ SENSITIVE: []
1542
+ end
1543
+
1544
+ class SourceFiles
1545
+ attr_accessor source1: ::String
1546
+ attr_accessor source2: ::String
1547
+ SENSITIVE: []
1548
+ end
1549
+
1550
+ class SseConfig
1551
+ attr_accessor type: ("KMS")
1552
+ attr_accessor key_arn: ::String
1553
+ SENSITIVE: []
1554
+ end
1555
+
1556
+ class StartAnnotationImportRequest
1557
+ attr_accessor destination_name: ::String
1558
+ attr_accessor role_arn: ::String
1559
+ attr_accessor items: ::Array[Types::AnnotationImportItemSource]
1560
+ attr_accessor version_name: ::String
1561
+ attr_accessor format_options: Types::FormatOptions
1562
+ attr_accessor run_left_normalization: bool
1563
+ attr_accessor annotation_fields: ::Hash[::String, ::String]
1564
+ SENSITIVE: []
1565
+ end
1566
+
1567
+ class StartAnnotationImportResponse
1568
+ attr_accessor job_id: ::String
1569
+ SENSITIVE: []
1570
+ end
1571
+
1572
+ class StartReadSetActivationJobRequest
1573
+ attr_accessor sequence_store_id: ::String
1574
+ attr_accessor client_token: ::String
1575
+ attr_accessor sources: ::Array[Types::StartReadSetActivationJobSourceItem]
1576
+ SENSITIVE: []
1577
+ end
1578
+
1579
+ class StartReadSetActivationJobResponse
1580
+ attr_accessor id: ::String
1581
+ attr_accessor sequence_store_id: ::String
1582
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
1583
+ attr_accessor creation_time: ::Time
1584
+ SENSITIVE: []
1585
+ end
1586
+
1587
+ class StartReadSetActivationJobSourceItem
1588
+ attr_accessor read_set_id: ::String
1589
+ SENSITIVE: []
1590
+ end
1591
+
1592
+ class StartReadSetExportJobRequest
1593
+ attr_accessor sequence_store_id: ::String
1594
+ attr_accessor destination: ::String
1595
+ attr_accessor role_arn: ::String
1596
+ attr_accessor client_token: ::String
1597
+ attr_accessor sources: ::Array[Types::ExportReadSet]
1598
+ SENSITIVE: []
1599
+ end
1600
+
1601
+ class StartReadSetExportJobResponse
1602
+ attr_accessor id: ::String
1603
+ attr_accessor sequence_store_id: ::String
1604
+ attr_accessor destination: ::String
1605
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
1606
+ attr_accessor creation_time: ::Time
1607
+ SENSITIVE: []
1608
+ end
1609
+
1610
+ class StartReadSetImportJobRequest
1611
+ attr_accessor sequence_store_id: ::String
1612
+ attr_accessor role_arn: ::String
1613
+ attr_accessor client_token: ::String
1614
+ attr_accessor sources: ::Array[Types::StartReadSetImportJobSourceItem]
1615
+ SENSITIVE: []
1616
+ end
1617
+
1618
+ class StartReadSetImportJobResponse
1619
+ attr_accessor id: ::String
1620
+ attr_accessor sequence_store_id: ::String
1621
+ attr_accessor role_arn: ::String
1622
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
1623
+ attr_accessor creation_time: ::Time
1624
+ SENSITIVE: []
1625
+ end
1626
+
1627
+ class StartReadSetImportJobSourceItem
1628
+ attr_accessor source_files: Types::SourceFiles
1629
+ attr_accessor source_file_type: ("FASTQ" | "BAM" | "CRAM" | "UBAM")
1630
+ attr_accessor subject_id: ::String
1631
+ attr_accessor sample_id: ::String
1632
+ attr_accessor generated_from: ::String
1633
+ attr_accessor reference_arn: ::String
1634
+ attr_accessor name: ::String
1635
+ attr_accessor description: ::String
1636
+ attr_accessor tags: ::Hash[::String, ::String]
1637
+ SENSITIVE: []
1638
+ end
1639
+
1640
+ class StartReferenceImportJobRequest
1641
+ attr_accessor reference_store_id: ::String
1642
+ attr_accessor role_arn: ::String
1643
+ attr_accessor client_token: ::String
1644
+ attr_accessor sources: ::Array[Types::StartReferenceImportJobSourceItem]
1645
+ SENSITIVE: []
1646
+ end
1647
+
1648
+ class StartReferenceImportJobResponse
1649
+ attr_accessor id: ::String
1650
+ attr_accessor reference_store_id: ::String
1651
+ attr_accessor role_arn: ::String
1652
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLING" | "CANCELLED" | "FAILED" | "COMPLETED" | "COMPLETED_WITH_FAILURES")
1653
+ attr_accessor creation_time: ::Time
1654
+ SENSITIVE: []
1655
+ end
1656
+
1657
+ class StartReferenceImportJobSourceItem
1658
+ attr_accessor source_file: ::String
1659
+ attr_accessor name: ::String
1660
+ attr_accessor description: ::String
1661
+ attr_accessor tags: ::Hash[::String, ::String]
1662
+ SENSITIVE: []
1663
+ end
1664
+
1665
+ class StartRunRequest
1666
+ attr_accessor workflow_id: ::String
1667
+ attr_accessor workflow_type: ("PRIVATE" | "READY2RUN")
1668
+ attr_accessor run_id: ::String
1669
+ attr_accessor role_arn: ::String
1670
+ attr_accessor name: ::String
1671
+ attr_accessor run_group_id: ::String
1672
+ attr_accessor priority: ::Integer
1673
+ attr_accessor parameters: untyped
1674
+ attr_accessor storage_capacity: ::Integer
1675
+ attr_accessor output_uri: ::String
1676
+ attr_accessor log_level: ("OFF" | "FATAL" | "ERROR" | "ALL")
1677
+ attr_accessor tags: ::Hash[::String, ::String]
1678
+ attr_accessor request_id: ::String
1679
+ attr_accessor retention_mode: ("RETAIN" | "REMOVE")
1680
+ SENSITIVE: []
1681
+ end
1682
+
1683
+ class StartRunResponse
1684
+ attr_accessor arn: ::String
1685
+ attr_accessor id: ::String
1686
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "DELETED" | "CANCELLED" | "FAILED")
1687
+ attr_accessor tags: ::Hash[::String, ::String]
1688
+ attr_accessor uuid: ::String
1689
+ attr_accessor run_output_uri: ::String
1690
+ SENSITIVE: []
1691
+ end
1692
+
1693
+ class StartVariantImportRequest
1694
+ attr_accessor destination_name: ::String
1695
+ attr_accessor role_arn: ::String
1696
+ attr_accessor items: ::Array[Types::VariantImportItemSource]
1697
+ attr_accessor run_left_normalization: bool
1698
+ attr_accessor annotation_fields: ::Hash[::String, ::String]
1699
+ SENSITIVE: []
1700
+ end
1701
+
1702
+ class StartVariantImportResponse
1703
+ attr_accessor job_id: ::String
1704
+ SENSITIVE: []
1705
+ end
1706
+
1707
+ class StoreOptions
1708
+ attr_accessor tsv_store_options: Types::TsvStoreOptions
1709
+ attr_accessor unknown: untyped
1710
+ SENSITIVE: []
1711
+
1712
+ class TsvStoreOptions < StoreOptions
1713
+ end
1714
+ class Unknown < StoreOptions
1715
+ end
1716
+ end
1717
+
1718
+ class TagResourceRequest
1719
+ attr_accessor resource_arn: ::String
1720
+ attr_accessor tags: ::Hash[::String, ::String]
1721
+ SENSITIVE: []
1722
+ end
1723
+
1724
+ class TagResourceResponse < Aws::EmptyStructure
1725
+ end
1726
+
1727
+ class TaskListItem
1728
+ attr_accessor task_id: ::String
1729
+ attr_accessor status: ("PENDING" | "STARTING" | "RUNNING" | "STOPPING" | "COMPLETED" | "CANCELLED" | "FAILED")
1730
+ attr_accessor name: ::String
1731
+ attr_accessor cpus: ::Integer
1732
+ attr_accessor memory: ::Integer
1733
+ attr_accessor creation_time: ::Time
1734
+ attr_accessor start_time: ::Time
1735
+ attr_accessor stop_time: ::Time
1736
+ attr_accessor gpus: ::Integer
1737
+ attr_accessor instance_type: ::String
1738
+ SENSITIVE: []
1739
+ end
1740
+
1741
+ class ThrottlingException
1742
+ attr_accessor message: ::String
1743
+ SENSITIVE: []
1744
+ end
1745
+
1746
+ class TsvOptions
1747
+ attr_accessor read_options: Types::ReadOptions
1748
+ SENSITIVE: []
1749
+ end
1750
+
1751
+ class TsvStoreOptions
1752
+ attr_accessor annotation_type: ("GENERIC" | "CHR_POS" | "CHR_POS_REF_ALT" | "CHR_START_END_ONE_BASE" | "CHR_START_END_REF_ALT_ONE_BASE" | "CHR_START_END_ZERO_BASE" | "CHR_START_END_REF_ALT_ZERO_BASE")
1753
+ attr_accessor format_to_header: ::Hash[("CHR" | "START" | "END" | "REF" | "ALT" | "POS"), ::String]
1754
+ attr_accessor schema: ::Array[::Hash[::String, ("LONG" | "INT" | "STRING" | "FLOAT" | "DOUBLE" | "BOOLEAN")]]
1755
+ SENSITIVE: []
1756
+ end
1757
+
1758
+ class TsvVersionOptions
1759
+ attr_accessor annotation_type: ("GENERIC" | "CHR_POS" | "CHR_POS_REF_ALT" | "CHR_START_END_ONE_BASE" | "CHR_START_END_REF_ALT_ONE_BASE" | "CHR_START_END_ZERO_BASE" | "CHR_START_END_REF_ALT_ZERO_BASE")
1760
+ attr_accessor format_to_header: ::Hash[("CHR" | "START" | "END" | "REF" | "ALT" | "POS"), ::String]
1761
+ attr_accessor schema: ::Array[::Hash[::String, ("LONG" | "INT" | "STRING" | "FLOAT" | "DOUBLE" | "BOOLEAN")]]
1762
+ SENSITIVE: []
1763
+ end
1764
+
1765
+ class UntagResourceRequest
1766
+ attr_accessor resource_arn: ::String
1767
+ attr_accessor tag_keys: ::Array[::String]
1768
+ SENSITIVE: []
1769
+ end
1770
+
1771
+ class UntagResourceResponse < Aws::EmptyStructure
1772
+ end
1773
+
1774
+ class UpdateAnnotationStoreRequest
1775
+ attr_accessor name: ::String
1776
+ attr_accessor description: ::String
1777
+ SENSITIVE: []
1778
+ end
1779
+
1780
+ class UpdateAnnotationStoreResponse
1781
+ attr_accessor id: ::String
1782
+ attr_accessor reference: Types::ReferenceItem
1783
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
1784
+ attr_accessor name: ::String
1785
+ attr_accessor description: ::String
1786
+ attr_accessor creation_time: ::Time
1787
+ attr_accessor update_time: ::Time
1788
+ attr_accessor store_options: Types::StoreOptions
1789
+ attr_accessor store_format: ("GFF" | "TSV" | "VCF")
1790
+ SENSITIVE: []
1791
+ end
1792
+
1793
+ class UpdateAnnotationStoreVersionRequest
1794
+ attr_accessor name: ::String
1795
+ attr_accessor version_name: ::String
1796
+ attr_accessor description: ::String
1797
+ SENSITIVE: []
1798
+ end
1799
+
1800
+ class UpdateAnnotationStoreVersionResponse
1801
+ attr_accessor store_id: ::String
1802
+ attr_accessor id: ::String
1803
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
1804
+ attr_accessor name: ::String
1805
+ attr_accessor version_name: ::String
1806
+ attr_accessor description: ::String
1807
+ attr_accessor creation_time: ::Time
1808
+ attr_accessor update_time: ::Time
1809
+ SENSITIVE: []
1810
+ end
1811
+
1812
+ class UpdateRunGroupRequest
1813
+ attr_accessor id: ::String
1814
+ attr_accessor name: ::String
1815
+ attr_accessor max_cpus: ::Integer
1816
+ attr_accessor max_runs: ::Integer
1817
+ attr_accessor max_duration: ::Integer
1818
+ attr_accessor max_gpus: ::Integer
1819
+ SENSITIVE: []
1820
+ end
1821
+
1822
+ class UpdateVariantStoreRequest
1823
+ attr_accessor name: ::String
1824
+ attr_accessor description: ::String
1825
+ SENSITIVE: []
1826
+ end
1827
+
1828
+ class UpdateVariantStoreResponse
1829
+ attr_accessor id: ::String
1830
+ attr_accessor reference: Types::ReferenceItem
1831
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
1832
+ attr_accessor name: ::String
1833
+ attr_accessor description: ::String
1834
+ attr_accessor creation_time: ::Time
1835
+ attr_accessor update_time: ::Time
1836
+ SENSITIVE: []
1837
+ end
1838
+
1839
+ class UpdateWorkflowRequest
1840
+ attr_accessor id: ::String
1841
+ attr_accessor name: ::String
1842
+ attr_accessor description: ::String
1843
+ SENSITIVE: []
1844
+ end
1845
+
1846
+ class UploadReadSetPartRequest
1847
+ attr_accessor sequence_store_id: ::String
1848
+ attr_accessor upload_id: ::String
1849
+ attr_accessor part_source: ("SOURCE1" | "SOURCE2")
1850
+ attr_accessor part_number: ::Integer
1851
+ attr_accessor payload: ::IO
1852
+ SENSITIVE: []
1853
+ end
1854
+
1855
+ class UploadReadSetPartResponse
1856
+ attr_accessor checksum: ::String
1857
+ SENSITIVE: []
1858
+ end
1859
+
1860
+ class ValidationException
1861
+ attr_accessor message: ::String
1862
+ SENSITIVE: []
1863
+ end
1864
+
1865
+ class VariantImportItemDetail
1866
+ attr_accessor source: ::String
1867
+ attr_accessor job_status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
1868
+ attr_accessor status_message: ::String
1869
+ SENSITIVE: []
1870
+ end
1871
+
1872
+ class VariantImportItemSource
1873
+ attr_accessor source: ::String
1874
+ SENSITIVE: []
1875
+ end
1876
+
1877
+ class VariantImportJobItem
1878
+ attr_accessor id: ::String
1879
+ attr_accessor destination_name: ::String
1880
+ attr_accessor role_arn: ::String
1881
+ attr_accessor status: ("SUBMITTED" | "IN_PROGRESS" | "CANCELLED" | "COMPLETED" | "FAILED" | "COMPLETED_WITH_FAILURES")
1882
+ attr_accessor creation_time: ::Time
1883
+ attr_accessor update_time: ::Time
1884
+ attr_accessor completion_time: ::Time
1885
+ attr_accessor run_left_normalization: bool
1886
+ attr_accessor annotation_fields: ::Hash[::String, ::String]
1887
+ SENSITIVE: []
1888
+ end
1889
+
1890
+ class VariantStoreItem
1891
+ attr_accessor id: ::String
1892
+ attr_accessor reference: Types::ReferenceItem
1893
+ attr_accessor status: ("CREATING" | "UPDATING" | "DELETING" | "ACTIVE" | "FAILED")
1894
+ attr_accessor store_arn: ::String
1895
+ attr_accessor name: ::String
1896
+ attr_accessor description: ::String
1897
+ attr_accessor sse_config: Types::SseConfig
1898
+ attr_accessor creation_time: ::Time
1899
+ attr_accessor update_time: ::Time
1900
+ attr_accessor status_message: ::String
1901
+ attr_accessor store_size_bytes: ::Integer
1902
+ SENSITIVE: []
1903
+ end
1904
+
1905
+ class VcfOptions
1906
+ attr_accessor ignore_qual_field: bool
1907
+ attr_accessor ignore_filter_field: bool
1908
+ SENSITIVE: []
1909
+ end
1910
+
1911
+ class VersionDeleteError
1912
+ attr_accessor version_name: ::String
1913
+ attr_accessor message: ::String
1914
+ SENSITIVE: []
1915
+ end
1916
+
1917
+ class VersionOptions
1918
+ attr_accessor tsv_version_options: Types::TsvVersionOptions
1919
+ attr_accessor unknown: untyped
1920
+ SENSITIVE: []
1921
+
1922
+ class TsvVersionOptions < VersionOptions
1923
+ end
1924
+ class Unknown < VersionOptions
1925
+ end
1926
+ end
1927
+
1928
+ class WorkflowListItem
1929
+ attr_accessor arn: ::String
1930
+ attr_accessor id: ::String
1931
+ attr_accessor name: ::String
1932
+ attr_accessor status: ("CREATING" | "ACTIVE" | "UPDATING" | "DELETED" | "FAILED" | "INACTIVE")
1933
+ attr_accessor type: ("PRIVATE" | "READY2RUN")
1934
+ attr_accessor digest: ::String
1935
+ attr_accessor creation_time: ::Time
1936
+ attr_accessor metadata: ::Hash[::String, ::String]
1937
+ SENSITIVE: []
1938
+ end
1939
+
1940
+ class WorkflowParameter
1941
+ attr_accessor description: ::String
1942
+ attr_accessor optional: bool
1943
+ SENSITIVE: []
1944
+ end
1945
+ end
1946
+ end