arvados-cli 0.1.20160302171627 → 0.1.20160302214005
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- checksums.yaml +4 -4
- data/bin/crunch-job +32 -27
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 934d2d0195d5d124aa9c48264e9e414d97ccd7a5
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4
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+
data.tar.gz: dfede012720bfd95eace32c676c41d905c7d3ef9
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: a9486905dc79dc8c58059f73e622e3dfc56d35de679bde9b7dfd771fd2f53510e13e8998f841715eadf7df5f661f1c3712dafea6b9bfe5dfcd8edcd39a75d2ba
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7
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+
data.tar.gz: 70be25de9c616b3f703f7d9bc4b22152d9bb20636a932424e8d9e5b5ef9e972c1b3c62b0407f3e776524718efb013bd9a807767d2e04256fd596da3a7ecbdd40
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data/bin/crunch-job
CHANGED
@@ -1134,7 +1134,9 @@ sub update_progress_stats
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1134
1134
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sub reapchildren
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1135
1135
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{
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1136
1136
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my $children_reaped = 0;
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1137
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-
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1137
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+
my @successful_task_uuids = ();
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1138
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+
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1139
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+
while((my $pid = waitpid (-1, WNOHANG)) > 0)
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1138
1140
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{
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1139
1141
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my $childstatus = $?;
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1140
1142
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@@ -1207,8 +1209,9 @@ sub reapchildren
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1207
1209
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push @jobstep_todo, $jobstepidx;
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1208
1210
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$Job->{'tasks_summary'}->{'failed'}++;
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1209
1211
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}
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1210
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-
else
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1212
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+
else # task_success
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1211
1213
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{
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1214
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+
push @successful_task_uuids, $Jobstep->{'arvados_task'}->{uuid};
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1212
1215
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++$thisround_succeeded;
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1213
1216
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$slot[$proc{$pid}->{slot}]->{node}->{losing_streak} = 0;
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1214
1217
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$slot[$proc{$pid}->{slot}]->{node}->{hold_until} = 0;
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@@ -1231,34 +1234,36 @@ sub reapchildren
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1231
1234
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push @freeslot, $proc{$pid}->{slot};
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1232
1235
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delete $proc{$pid};
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1233
1236
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1234
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-
if ($task_success) {
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1235
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-
# Load new tasks
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1236
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-
my $newtask_list = [];
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1237
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-
my $newtask_results;
|
1238
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-
do {
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1239
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-
$newtask_results = api_call(
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1240
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-
"job_tasks/list",
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1241
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-
'where' => {
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1242
|
-
'created_by_job_task_uuid' => $Jobstep->{'arvados_task'}->{uuid}
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1243
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-
},
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1244
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-
'order' => 'qsequence',
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1245
|
-
'offset' => scalar(@$newtask_list),
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1246
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-
);
|
1247
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-
push(@$newtask_list, @{$newtask_results->{items}});
|
1248
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-
} while (@{$newtask_results->{items}});
|
1249
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-
foreach my $arvados_task (@$newtask_list) {
|
1250
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-
my $jobstep = {
|
1251
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-
'level' => $arvados_task->{'sequence'},
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1252
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-
'failures' => 0,
|
1253
|
-
'arvados_task' => $arvados_task
|
1254
|
-
};
|
1255
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-
push @jobstep, $jobstep;
|
1256
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-
push @jobstep_todo, $#jobstep;
|
1257
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-
}
|
1258
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-
}
|
1259
1237
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$progress_is_dirty = 1;
|
1260
1238
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}
|
1261
1239
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|
1240
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+
if (scalar(@successful_task_uuids) > 0)
|
1241
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+
{
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1242
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+
Log (undef, sprintf("%d tasks exited (%d succeeded), checking for new tasks from API server.", $children_reaped, scalar(@successful_task_uuids)));
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1243
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+
# Load new tasks
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1244
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+
my $newtask_list = [];
|
1245
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+
my $newtask_results;
|
1246
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+
do {
|
1247
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+
$newtask_results = api_call(
|
1248
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+
"job_tasks/list",
|
1249
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+
'filters' => [["created_by_job_task_uuid","in",\@successful_task_uuids]],
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1250
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+
'order' => 'qsequence',
|
1251
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+
'offset' => scalar(@$newtask_list),
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1252
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+
);
|
1253
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+
push(@$newtask_list, @{$newtask_results->{items}});
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1254
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+
} while (@{$newtask_results->{items}});
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1255
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+
Log (undef, sprintf("Got %d new tasks from API server.", scalar(@$newtask_list)));
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1256
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+
foreach my $arvados_task (@$newtask_list) {
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1257
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+
my $jobstep = {
|
1258
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+
'level' => $arvados_task->{'sequence'},
|
1259
|
+
'failures' => 0,
|
1260
|
+
'arvados_task' => $arvados_task
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1261
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+
};
|
1262
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+
push @jobstep, $jobstep;
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1263
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+
push @jobstep_todo, $#jobstep;
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1264
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+
}
|
1265
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+
}
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1266
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+
|
1262
1267
|
return $children_reaped;
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1263
1268
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}
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1264
1269
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|
metadata
CHANGED
@@ -1,7 +1,7 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: arvados-cli
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.1.
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4
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+
version: 0.1.20160302214005
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Arvados Authors
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@@ -178,7 +178,7 @@ dependencies:
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|
178
178
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- - "<"
|
179
179
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- !ruby/object:Gem::Version
|
180
180
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version: 1.0.0
|
181
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-
description: Arvados command line tools, git commit
|
181
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+
description: Arvados command line tools, git commit ec51cd72eabf0f0bbebf7cd979d1a23a1319a416
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182
182
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email: gem-dev@curoverse.com
|
183
183
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executables:
|
184
184
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- arv
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