arvados-cli 0.1.20151125183724 → 0.1.20151201170326
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- checksums.yaml +4 -4
- data/bin/crunch-job +6 -1
- metadata +3 -3
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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|
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: afbf91ba88b245cb4f61dd90de2ada024c0580de
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|
4
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+
data.tar.gz: d8688c417704b4cd9d127d58ac3e146970d76824
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: cc51a30a250d2c7ae49b002b978ebad08f740b3e1fa8cd21c05372ffd2fa3e942b8315b7d6da9b0c068ab3a8acea8bd522ab3c072669c10f587a26181e4fdf46
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7
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+
data.tar.gz: 8570166f5a5ee09c1885b3e76d2dc20a28d0c83c987195a659a590d1e6243b7c888de9faec024d136fb958b33ff4ab4da8e7f16d1fd468dc4d260d4d63f5c6a4
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data/bin/crunch-job
CHANGED
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@@ -886,6 +886,11 @@ for (my $todo_ptr = 0; $todo_ptr <= $#jobstep_todo; $todo_ptr ++)
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886
886
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887
887
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my $stdbuf = " stdbuf --output=0 --error=0 ";
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888
888
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|
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889
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+
my $arv_file_cache = "";
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|
890
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+
if (defined($Job->{'runtime_constraints'}->{'keep_cache_mb_per_task'})) {
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891
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+
$arv_file_cache = "--file-cache=" . ($Job->{'runtime_constraints'}->{'keep_cache_mb_per_task'} * 1024 * 1024);
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892
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+
}
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893
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+
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889
894
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my $command =
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|
890
895
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"if [ -e $ENV{TASK_WORK} ]; then rm -rf $ENV{TASK_WORK}; fi; "
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891
896
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."mkdir -p $ENV{CRUNCH_TMP} $ENV{JOB_WORK} $ENV{TASK_WORK} $ENV{TASK_KEEPMOUNT} "
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@@ -896,7 +901,7 @@ for (my $todo_ptr = 0; $todo_ptr <= $#jobstep_todo; $todo_ptr ++)
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896
901
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.q{&& SWAP=$(awk '($1 == "SwapTotal:"){print $2}' </proc/meminfo) }
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|
897
902
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."&& MEMLIMIT=\$(( (\$MEM * 95) / ($ENV{CRUNCH_NODE_SLOTS} * 100) )) "
|
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898
903
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."&& let SWAPLIMIT=\$MEMLIMIT+\$SWAP ";
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899
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-
$command .= "&& exec arv-mount --by-pdh --crunchstat-interval=10 --allow-other $ENV{TASK_KEEPMOUNT} --exec ";
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904
|
+
$command .= "&& exec arv-mount --by-pdh --crunchstat-interval=10 --allow-other $arv_file_cache $ENV{TASK_KEEPMOUNT} --exec ";
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|
900
905
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if ($docker_hash)
|
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901
906
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{
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|
902
907
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my $containername = "$Jobstep->{arvados_task}->{uuid}-$Jobstep->{failures}";
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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|
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1
1
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--- !ruby/object:Gem::Specification
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|
2
2
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name: arvados-cli
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|
3
3
|
version: !ruby/object:Gem::Version
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|
4
|
-
version: 0.1.
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|
4
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+
version: 0.1.20151201170326
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5
5
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platform: ruby
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6
6
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authors:
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|
7
7
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- Arvados Authors
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|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
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|
10
10
|
cert_chain: []
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|
11
|
-
date: 2015-
|
|
11
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+
date: 2015-12-01 00:00:00.000000000 Z
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|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
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name: arvados
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|
@@ -178,7 +178,7 @@ dependencies:
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178
178
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- - "<"
|
|
179
179
|
- !ruby/object:Gem::Version
|
|
180
180
|
version: 1.0.0
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|
181
|
-
description: Arvados command line tools, git commit
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|
181
|
+
description: Arvados command line tools, git commit 8788c145b860e19a1f04c4dc6abdcda14c859403
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|
182
182
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email: gem-dev@curoverse.com
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|
183
183
|
executables:
|
|
184
184
|
- arv
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