arvados-cli 0.1.20151023190001 → 0.1.20151104051940
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- checksums.yaml +4 -4
- data/bin/crunch-job +4 -3
- metadata +3 -3
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: c15db0b63a7e7c4666f80da28a47729e41b7eec9
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4
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+
data.tar.gz: 3c047409ff1ed08d1e9909f528660072e4b16d40
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: e02f1e39f820e1e1a62c5a98886dbf9e316c8ba4d3cc9577fe37f6b5caf14f2e1d8a284c25853f3852e31680645fba9e3eb95873ed278f73cc9d1b2f852c535e
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7
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+
data.tar.gz: fd34686627b9aa9b31b40fcb3db48ea61e7413fc39fa9a593f98d135ab3a6ce567f6b1a79cf1e563b9e9efdd4e5751be01012d2d0a6fca542c884252258352f9
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data/bin/crunch-job
CHANGED
@@ -467,7 +467,7 @@ fi
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467
467
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}
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468
468
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srun(["srun", "--nodelist=" . $node[0]],
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469
469
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["/bin/sh", "-ec",
|
470
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-
"a=`$docker_bin run
|
470
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+
"a=`$docker_bin run $try_user_arg $docker_hash id --user` && " .
|
471
471
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" test \$a -ne 0"],
|
472
472
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{fork => 1});
|
473
473
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if ($? == 0) {
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@@ -896,9 +896,10 @@ for (my $todo_ptr = 0; $todo_ptr <= $#jobstep_todo; $todo_ptr ++)
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896
896
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$command .= "&& exec arv-mount --by-id --allow-other $ENV{TASK_KEEPMOUNT} --exec ";
|
897
897
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if ($docker_hash)
|
898
898
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{
|
899
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-
my $
|
899
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+
my $containername = "$Jobstep->{arvados_task}->{uuid}-$Jobstep->{failures}";
|
900
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+
my $cidfile = "$ENV{CRUNCH_TMP}/$containername.cid";
|
900
901
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$command .= "crunchstat -cgroup-root=/sys/fs/cgroup -cgroup-parent=docker -cgroup-cid=$cidfile -poll=10000 ";
|
901
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-
$command .= "$docker_bin run --
|
902
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+
$command .= "$docker_bin run --name=$containername --attach=stdout --attach=stderr --attach=stdin -i \Q$dockeruserarg\E --cidfile=$cidfile --sig-proxy ";
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902
903
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# We only set memory limits if Docker lets us limit both memory and swap.
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903
904
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# Memory limits alone have been supported longer, but subprocesses tend
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904
905
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# to get SIGKILL if they exceed that without any swap limit set.
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metadata
CHANGED
@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
|
2
2
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name: arvados-cli
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.1.
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4
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+
version: 0.1.20151104051940
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Arvados Authors
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8
8
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autorequire:
|
9
9
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bindir: bin
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10
10
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cert_chain: []
|
11
|
-
date: 2015-
|
11
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+
date: 2015-11-04 00:00:00.000000000 Z
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12
12
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dependencies:
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13
13
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- !ruby/object:Gem::Dependency
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14
14
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name: arvados
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@@ -178,7 +178,7 @@ dependencies:
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|
178
178
|
- - "<"
|
179
179
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- !ruby/object:Gem::Version
|
180
180
|
version: 1.0.0
|
181
|
-
description: Arvados command line tools, git commit
|
181
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+
description: Arvados command line tools, git commit 1d1c6de3c842a33a57b7d469fdaaaa1b873433dc
|
182
182
|
email: gem-dev@curoverse.com
|
183
183
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executables:
|
184
184
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- arv
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