arvados-cli 0.1.20140807164620 → 0.1.20140808135152
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/bin/crunch-job +15 -14
- metadata +3 -3
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: be86bee39e46832415ed4640e405ee778a15330f
|
4
|
+
data.tar.gz: d4304fcf4fa668e4a3018db3ec2c7743bc69aa2d
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: e429f432db9046e3a0279377fd6f62d8875fcc423787f59cddf0964c5b18bbd8b4eb13bcc67b25dfefcdbb6e0a2abef30762328c80a9d319c25c0f5c25c5f62e
|
7
|
+
data.tar.gz: d7a73c64743d2a71c959cf5c7b91e0b981329f9574552efe5dbb92d23eeca01533e9ce51ed7d4552a864041a2bfdda3b9dc992ab1e7fec22a06c6a7db4484d3b
|
data/bin/crunch-job
CHANGED
@@ -499,16 +499,17 @@ if (!$have_slurm)
|
|
499
499
|
|
500
500
|
# If this job requires a Docker image, install that.
|
501
501
|
my $docker_bin = "/usr/bin/docker.io";
|
502
|
-
my ($docker_locator, $docker_hash);
|
502
|
+
my ($docker_locator, $docker_stream, $docker_hash);
|
503
503
|
if ($docker_locator = $Job->{docker_image_locator}) {
|
504
|
-
$docker_hash =
|
504
|
+
($docker_stream, $docker_hash) = find_docker_image($docker_locator);
|
505
505
|
if (!$docker_hash)
|
506
506
|
{
|
507
507
|
croak("No Docker image hash found from locator $docker_locator");
|
508
508
|
}
|
509
|
+
$docker_stream =~ s/^\.//;
|
509
510
|
my $docker_install_script = qq{
|
510
511
|
if ! $docker_bin images -q --no-trunc | grep -qxF \Q$docker_hash\E; then
|
511
|
-
arv-get \Q$docker_locator/$docker_hash.tar\E | $docker_bin load
|
512
|
+
arv-get \Q$docker_locator$docker_stream/$docker_hash.tar\E | $docker_bin load
|
512
513
|
fi
|
513
514
|
};
|
514
515
|
my $docker_pid = fork();
|
@@ -1466,19 +1467,19 @@ sub must_lock_now
|
|
1466
1467
|
}
|
1467
1468
|
}
|
1468
1469
|
|
1469
|
-
sub
|
1470
|
-
# Given a Keep locator,
|
1471
|
-
#
|
1470
|
+
sub find_docker_image {
|
1471
|
+
# Given a Keep locator, check to see if it contains a Docker image.
|
1472
|
+
# If so, return its stream name and Docker hash.
|
1473
|
+
# If not, return undef for both values.
|
1472
1474
|
my $locator = shift;
|
1473
|
-
my $
|
1474
|
-
|
1475
|
-
|
1476
|
-
|
1477
|
-
|
1478
|
-
|
1479
|
-
$docker_hash = lc($link->{name});
|
1475
|
+
if (my $image = $arv->{collections}->{get}->execute(uuid => $locator)) {
|
1476
|
+
my @file_list = @{$image->{files}};
|
1477
|
+
if ((scalar(@file_list) == 1) &&
|
1478
|
+
($file_list[0][1] =~ /^([0-9A-Fa-f]{64})\.tar$/)) {
|
1479
|
+
return ($file_list[0][0], $1);
|
1480
|
+
}
|
1480
1481
|
}
|
1481
|
-
return
|
1482
|
+
return (undef, undef);
|
1482
1483
|
}
|
1483
1484
|
|
1484
1485
|
__DATA__
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: arvados-cli
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.1.
|
4
|
+
version: 0.1.20140808135152
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Arvados Authors
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2014-08-
|
11
|
+
date: 2014-08-08 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: arvados
|
@@ -166,7 +166,7 @@ dependencies:
|
|
166
166
|
- - "<"
|
167
167
|
- !ruby/object:Gem::Version
|
168
168
|
version: 1.0.0
|
169
|
-
description: This is the Arvados SDK CLI gem, git revision
|
169
|
+
description: This is the Arvados SDK CLI gem, git revision eef298a7cf58771583b255fb0e3e1cfcbcdb6e48
|
170
170
|
email: gem-dev@curoverse.com
|
171
171
|
executables:
|
172
172
|
- arv
|