arvados-cli 0.1.20140415111149 → 0.1.20140415171002
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/bin/crunch-job +12 -3
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 8e5bff96b6197f74a2595a83b33bad5c43a261d1
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4
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data.tar.gz: 3b3218c7638c6982eed06cdd9a8d63730f9502e8
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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metadata.gz: c8575fe11b6d0c51b44abdea405563772a5a203936b6c6c249d6fa6eb1379eebbcb00a7e294de412f2945bdf1bb4cff019458fb897722ba3da096e646b0593d8
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7
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+
data.tar.gz: 712617c534e52128082a424df200bf2f0ae9da074c58cfefb2ba2042a5a7a970b791d50332a957c12355c574328f9071115a4e2f318662604835b52c48a0a6ad
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data/bin/crunch-job
CHANGED
@@ -95,6 +95,15 @@ $ENV{"CRUNCH_INSTALL"} = "$ENV{CRUNCH_TMP}/opt";
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$ENV{"CRUNCH_WORK"} = $ENV{"JOB_WORK"}; # deprecated
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mkdir ($ENV{"JOB_WORK"});
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98
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+
my $arv_cli;
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+
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if (defined $ENV{"ARV_CLI"}) {
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$arv_cli = $ENV{"ARV_CLI"};
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}
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else {
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$arv_cli = 'arv';
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}
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my $force_unlock;
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my $git_dir;
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my $jobspec;
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@@ -1074,7 +1083,7 @@ sub fetch_block
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my $hash = shift;
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my ($keep, $child_out, $output_block);
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-
my $cmd = "
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1086
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+
my $cmd = "$arv_cli keep get \Q$hash\E";
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open($keep, '-|', $cmd) or die "fetch_block: $cmd: $!";
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sysread($keep, $output_block, 64 * 1024 * 1024);
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close $keep;
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@@ -1086,7 +1095,7 @@ sub collate_output
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Log (undef, "collate");
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my ($child_out, $child_in);
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-
my $pid = open2($child_out, $child_in,
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1098
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my $pid = open2($child_out, $child_in, $arv_cli, 'keep', 'put', '--raw');
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my $joboutput;
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for (@jobstep)
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{
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@@ -1236,7 +1245,7 @@ sub save_meta
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return if $justcheckpoint; # checkpointing is not relevant post-Warehouse.pm
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$local_logfile->flush;
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1239
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-
my $cmd = "
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+
my $cmd = "$arv_cli keep put --filename ''\Q$keep_logfile\E "
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. quotemeta($local_logfile->filename);
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my $loglocator = `$cmd`;
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die "system $cmd failed: $?" if $?;
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metadata
CHANGED
@@ -1,7 +1,7 @@
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1
1
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--- !ruby/object:Gem::Specification
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name: arvados-cli
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version: !ruby/object:Gem::Version
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-
version: 0.1.
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+
version: 0.1.20140415171002
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platform: ruby
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authors:
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- Arvados Authors
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@@ -146,7 +146,7 @@ dependencies:
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- - ~>
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- !ruby/object:Gem::Version
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version: '0.8'
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-
description: This is the Arvados SDK CLI gem, git revision
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description: This is the Arvados SDK CLI gem, git revision 52b3716d78c410806e8aaea89994b39015694258
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email: gem-dev@curoverse.com
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executables:
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- arv
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