adiwg-mdtranslator 1.3.0 → 1.4.0.beta1

data/lib/adiwg/mdtranslator/writers/sbJson/sections/sbJson_base.rb

@@ -0,0 +1,19 @@
+require 'jbuilder'
+
+module ADIWG
+  module Mdtranslator
+    module Writers
+      module SbJson
+        module Base
+          def json_map(collection = [], _class)
+            if collection.nil? || collection.empty?
+              return nil
+            else
+              collection.map { |item| _class.build(item).attributes! }
+            end
+          end
+        end
+      end
+    end
+  end
+end

data/lib/adiwg/mdtranslator/writers/sbJson/sections/sbJson_contact.rb

@@ -0,0 +1,42 @@
+require 'jbuilder'
+
+module ADIWG
+  module Mdtranslator
+    module Writers
+      module SbJson
+        module Contact
+          def self.build(intObj)
+            Jbuilder.new do |json|
+              if intObj[:internal]
+                json.nil!
+              else
+                type = intObj[:indName].nil? ? 'organization' : 'person'
+                json.name intObj[:indName] || intObj[:orgName]
+                json.type type
+                json.email intObj[:address][:eMailList][0] unless intObj[:address].empty?
+                json.organization type == 'person' ? intObj[:orgName] : nil
+                json.primaryLocation do
+                  json.officePhone intObj[:phones].collect { |ph|
+                    ph[:phoneNumber] if ph[:phoneServiceType] == 'voice' }.reject(&:nil?).first
+                  json.faxPhone intObj[:phones].collect { |ph|
+                    ph[:phoneNumber] if ph[:phoneServiceType] == 'fax' }.reject(&:nil?).first
+                end
+                json.streetAddress do
+                  add = intObj[:address]
+                  unless[:deliveryPoints].empty?
+                    json.line1 add[:deliveryPoints][0]
+                    json.line2 add[:deliveryPoints][1]
+                  end
+                  json.city add[:city]
+                  json.state add[:adminArea]
+                  json.zip add[:postalCode]
+                  json.country add[:country]
+                end unless intObj[:address].empty?
+              end
+            end
+          end
+        end
+      end
+    end
+  end
+end

data/lib/adiwg/mdtranslator/writers/sbJson/sections/sbJson_identifier.rb

@@ -0,0 +1,22 @@
+require 'jbuilder'
+
+module ADIWG
+  module Mdtranslator
+    module Writers
+      module SbJson
+        module Identifier
+          def self.build(intObj)
+            Jbuilder.new do |json|
+              json.type intObj[:identifierType]
+              json.scheme intObj[:identifierNamespace] ||
+                          unless intObj[:identifierCitation].empty?
+                            intObj[:identifierCitation][:citOlResources][0][:olResURI] unless intObj[:identifierCitation][:citOlResources].empty?
+                          end
+              json.key intObj[:identifier]
+            end
+          end
+        end
+      end
+    end
+  end
+end

data/lib/adiwg/mdtranslator/writers/sbJson/sections/sbJson_spatial.rb

@@ -0,0 +1,49 @@
+require 'jbuilder'
+require 'rgeo'
+
+module ADIWG
+  module Mdtranslator
+    module Writers
+      module SbJson
+        module Spatial
+          def self.build(intObj)
+            geo = []
+            intObj.each do |ext|
+              ext[:extGeoElements].each do |ge|
+                case ge[:elementType]
+                when 'GeometryCollection'
+                  ge[:elementGeometry][:geometry].each do |geom|
+                    geo << AdiwgGeoFormat.internal_to_wkt(geom[:elementGeometry])
+                  end
+
+                when 'FeatureCollection'
+                  ge[:elementGeometry][:geometry].each do |fea|
+                    geo << AdiwgGeoFormat.internal_to_wkt(fea[:elementGeometry])
+                  end
+                else
+                  geo << AdiwgGeoFormat.internal_to_wkt(ge[:elementGeometry])
+                end
+              end
+            end
+            # puts geo
+            # calculate the bounds
+            reader = RGeo::WKRep::WKTParser.new(nil, support_wkt12: true)
+            fact = RGeo::Geographic.spherical_factory
+            bbox = RGeo::Cartesian::BoundingBox.new(fact, ignore_z: true)
+            geo.each { |geom| bbox.add(reader.parse(geom)) }
+
+            {
+              boundingBox: {
+                minX: bbox.min_x,
+                maxX: bbox.max_x,
+                minY: bbox.min_y,
+                maxY: bbox.max_y
+              }
+            }
+
+          end
+        end
+      end
+    end
+  end
+end

data/lib/adiwg/mdtranslator/writers/sbJson/version.rb

@@ -0,0 +1,13 @@
+module ADIWG
+    module Mdtranslator
+        module Writers
+            module SbJson
+
+                # current version of mdJson writer,
+                # corresponds to mdJson output
+                VERSION = '0.0.0'
+
+            end
+        end
+    end
+end

data/test/readers/mdJson/v1/tc_reader_mdjson_translation.rb

@@ -0,0 +1,83 @@
+# MdTranslator - code to test mdtranslator from Ruby Terminal during development
+
+# History:
+# Stan Smith 2014-07-02 original script
+# Josh Bradley 2014-09-28 updated to use test/unit
+# Stan Smith 2015-01-16 changed ADIWG::Mdtranslator.translate() to keyword parameters
+# Stan Smith 2015-06-22 refactored setup to after removal of globals
+
+require 'minitest/autorun'
+require 'json'
+require 'adiwg-mdtranslator'
+
+class TestTranslation_mdJson_v1 < MiniTest::Test
+  @@reader = 'mdJson'
+  @@writer = 'html'
+
+  def test_full_success
+    # get json file for tests from examples folder
+    file = File.join(File.dirname(__FILE__), '../../../', 'schemas/v1_0/examples', 'full_example.json')
+    file = File.open(file, 'r')
+    jsonObj = file.read
+    file.close
+
+    # call opening module in mdTranslator
+    metadata = ADIWG::Mdtranslator.translate(
+      file: jsonObj, reader: @@reader, validate: 'normal',
+      writer: @@writer, showAllTags: 'true')
+    version = JSON.parse(jsonObj)['version']['version'].split('.')
+
+    assert_equal('json', metadata[:readerFormat], 'Check reader name')
+    assert metadata[:readerStructurePass], metadata[:readerStructureMessages].join(',')
+    assert_equal(@@reader, metadata[:readerRequested])
+
+    # major version
+    assert_equal(version[0], metadata[:readerVersionUsed].split('.')[0])
+
+    assert metadata[:readerValidationPass], "reader validation failed: \n" + metadata[:readerValidationMessages].join(',')
+    assert_equal(@@writer, metadata[:writerName])
+    assert metadata[:writerPass], "writer validation failed: \n" + metadata[:writerMessages].join(',')
+    refute_nil metadata[:writerOutput]
+  end
+
+  def test_minimum_success
+    # get json file for tests from examples folder
+    file = File.join(File.dirname(__FILE__), '../../../', 'schemas/v1_0/examples', 'minimum_example.json')
+    file = File.open(file, 'r')
+    jsonObj = file.read
+    file.close
+
+    # call opening module in mdTranslator
+    metadata = ADIWG::Mdtranslator.translate(
+      file: jsonObj, reader: @@reader, validate: 'normal',
+      writer: @@writer, showAllTags: 'true')
+
+    assert_equal('json', metadata[:readerFormat], 'Check reader name')
+    assert metadata[:readerStructurePass], metadata[:readerStructureMessages].join(',')
+    assert_equal(@@reader, metadata[:readerRequested])
+    assert metadata[:readerValidationPass], "reader validation failed: \n" + metadata[:readerValidationMessages].join(',')
+    assert_equal(@@writer, metadata[:writerName])
+    assert metadata[:writerPass], "writer validation failed: \n" + metadata[:writerMessages].join(',')
+    refute_nil metadata[:writerOutput]
+  end
+
+  def test_writers
+    dir = File.join(File.dirname(__FILE__), '../../../..', 'lib/adiwg/mdtranslator/writers')
+    writers = (Dir.glob "#{dir}/*/").map { |a| File.basename(a) }.reject! { |a| a == 'iso19110' }
+
+    # get json file for tests from examples folder
+    file = File.join(File.dirname(__FILE__), '../../../', 'schemas/v1_0/examples', 'full_example.json')
+    file = File.open(file, 'r')
+    jsonObj = file.read
+    file.close
+
+    writers.each do |writer|
+      # call opening module in mdTranslator
+      metadata = ADIWG::Mdtranslator.translate(
+        file: jsonObj, reader: @@reader, validate: 'normal',
+        writer: writer, showAllTags: 'true')
+
+      refute_nil metadata[:writerOutput], "Failed to translate #{@@reader} to #{writer}!"
+    end
+  end
+end

data/test/readers/sbJson/v0/tc_reader_sbjson_translation.rb

@@ -0,0 +1,79 @@
+require 'minitest/autorun'
+require 'json'
+# require 'adiwg-mdtranslator'
+require 'adiwg/mdtranslator/internal/internal_metadata_obj'
+require 'adiwg/mdtranslator/readers/sbJson/sbJson_reader'
+
+class TestTranslation_sbJson_v0 < MiniTest::Test
+  @@reader = 'sbJson'
+  @@writer = 'iso19115_2'
+
+  def test_full_success
+    # get json file for tests from examples folder
+    file = File.join(File.dirname(__FILE__), './', 'test.json')
+    file = File.open(file, 'r')
+    jsonObj = file.read
+    file.close
+
+    # call opening module in mdTranslator
+    metadata = ADIWG::Mdtranslator.translate(
+      file: jsonObj, reader: @@reader, validate: 'normal',
+      writer: @@writer, showAllTags: 'true')
+
+    # sbJson doesn't support versioning
+    version = %w(0 0 0)
+
+    assert_equal('json', metadata[:readerFormat], 'Check reader name')
+    assert metadata[:readerStructurePass], metadata[:readerStructureMessages].join(',')
+    assert_equal(@@reader, metadata[:readerRequested])
+
+    # major version
+    assert_equal(version[0], metadata[:readerVersionUsed].split('.')[0])
+
+    assert metadata[:readerValidationPass], "reader validation failed: \n" + metadata[:readerValidationMessages].join(',')
+    assert_equal(@@writer, metadata[:writerName])
+    assert metadata[:writerPass], "writer validation failed: \n" + metadata[:writerMessages].join(',')
+    refute_nil metadata[:writerOutput]
+  end
+
+  def test_minimum_success
+    # get json file for tests from examples folder
+    file = File.join(File.dirname(__FILE__), './', 'test.json')
+    file = File.open(file, 'r')
+    jsonObj = file.read
+    file.close
+
+    # call opening module in mdTranslator
+    metadata = ADIWG::Mdtranslator.translate(
+      file: jsonObj, reader: @@reader, validate: 'normal',
+      writer: @@writer, showAllTags: 'true')
+
+    assert_equal('json', metadata[:readerFormat], 'Check reader name')
+    assert metadata[:readerStructurePass], metadata[:readerStructureMessages].join(',')
+    assert_equal(@@reader, metadata[:readerRequested])
+    assert metadata[:readerValidationPass], "reader validation failed: \n" + metadata[:readerValidationMessages].join(',')
+    assert_equal(@@writer, metadata[:writerName])
+    assert metadata[:writerPass], "writer validation failed: \n" + metadata[:writerMessages].join(',')
+    refute_nil metadata[:writerOutput]
+  end
+
+  def test_writers
+    dir = File.join(File.dirname(__FILE__), '../../../..', 'lib/adiwg/mdtranslator/writers')
+    writers = (Dir.glob "#{dir}/*/").map { |a| File.basename(a) }.reject!{ |a| a == 'iso19110' }
+
+    # get json file for tests from examples folder
+    file = File.join(File.dirname(__FILE__), './', 'test.json')
+    file = File.open(file, 'r')
+    jsonObj = file.read
+    file.close
+
+    writers.each do |writer|
+      # call opening module in mdTranslator
+      metadata = ADIWG::Mdtranslator.translate(
+        file: jsonObj, reader: @@reader, validate: 'normal',
+        writer: writer, showAllTags: 'true')
+
+      refute_nil metadata[:writerOutput], "Failed to translate #{@@reader} to #{writer}!"
+    end
+  end
+end

data/test/readers/sbJson/v0/test.json

@@ -0,0 +1,431 @@
+{
+    "link": {
+        "rel": "self",
+        "url": "http://localhost:8090/catalog/item/52fe74416f8f4291717d3658"
+    },
+    "relatedItems": {
+        "link": {
+            "url": "http://localhost:8090/catalog/itemLinks?itemId=52fe74416f8f4291717d3658",
+            "rel": "related"
+        }
+    },
+    "id": "52fe74416f8f4291717d3658",
+    "identifiers": [{
+        "type": "testType",
+        "scheme": "testScheme",
+        "key": "testKey"
+    }],
+    "title": "TEST Item REST Services",
+    "subTitle": "Test Subtitle",
+    "alternateTitles": [
+        "Test Alternate Titles"
+    ],
+    "summary": "Test Body",
+    "body": "<div> Test Body </div>",
+    "purpose": "Test Purpose",
+    "rights": "Test Rights",
+    "provenance": {
+        "annotation": "Test Provenance - Annotation",
+        "dataSource": "Input directly",
+        "dateCreated": "2014-02-14T19:53:37Z",
+        "lastUpdated": "2014-02-14T22:33:09Z",
+        "lastUpdatedBy": "mrunnels@usgs.gov",
+        "createdBy": "mrunnels@usgs.gov"
+    },
+    "materialRequestInstructions": "Test Material Request Instructions",
+    "hasChildren": false,
+    "parentId": "52a767f26f8f46e6ddb14bd8",
+    "contacts": [{
+        "name": "Robert N Prescott",
+        "oldPartyId": 58818,
+        "type": "Distributor",
+        "sourceId": "asdf",
+        "contactType": "person",
+        "organizationsPerson": "usgs",
+        "ttyPhone": "123-123-1234",
+        "hours": "8-4",
+        "instructions": "test",
+        "email": "rprescott@usgs.gov",
+        "active": true,
+        "jobTitle": "Computer Programmer",
+        "personalTitle": "test",
+        "firstName": "Robert",
+        "middleName": "N",
+        "lastName": "Prescott",
+        "organization": {
+            "displayText": "Fort Collins Science Center"
+        },
+        "primaryLocation": {
+            "shortName": "asdf",
+            "name": "Robert N Prescott/BRD/CONT/USGS/DOI - Primary Location",
+            "description": "asdf",
+            "location": "asdf",
+            "building": "NRRC Bldg C",
+            "buildingCode": "KBA",
+            "roomNumber": "123",
+            "officePhone": "9702269250",
+            "faxPhone": "9702269230",
+            "latitude": 20,
+            "longitude": 20,
+            "streetAddress": {
+                "line1": "2150 Centre Avenue Bldg C",
+                "line2": "sadf",
+                "mailStopCode": "safd",
+                "city": "Fort Collins",
+                "state": "CO",
+                "zip": "80526",
+                "country": "asdf"
+            },
+            "mailAddress": {
+                "line1": "2150 Centre Avenue, Building C",
+                "line2": "asdf",
+                "mailStopCode": "asdf",
+                "city": "Fort Collins",
+                "state": "CO",
+                "zip": "80526-8118",
+                "country": "USA"
+            }
+        }
+    }, {
+        "name": "U.S. Geological Survey",
+        "oldPartyId": 18139,
+        "type": "Data Owner",
+        "contactType": "organization",
+        "active": true,
+        "aliases": [
+            "U.S. GEOLOGICAL SURVEY",
+            "USGS"
+        ],
+        "fbmsCodes": [
+            "GG00000000"
+        ],
+        "logoUrl": "http://my.usgs.gov/static-cache/images/dataOwner/v1/logosMed/USGSLogo.gif",
+        "smallLogoUrl": "http://my.usgs.gov/static-cache/images/dataOwner/v1/logosSmall/USGSLogo.gif",
+        "organization": {},
+        "primaryLocation": {
+            "shortName": "asdf",
+            "name": "Cascades Vol Observatory - COLUMBIA TECH CENTER [WWA]",
+            "description": "asdf",
+            "location": "asdf",
+            "building": "COLUMBIA TECH CENTER",
+            "buildingCode": "WWA",
+            "roomNumber": "asdf",
+            "officePhone": "asdf",
+            "faxPhone": "asdfasdf",
+            "latitude": 12,
+            "longitude": 12,
+            "streetAddress": {
+                "line1": "1300 SE Cardinal Court, Bldg. 10",
+                "city": "Vancouver",
+                "state": "WA",
+                "zip": "98683-9589",
+                "country": "USA"
+            },
+            "mailAddress": {
+                "line1": "1300 SE Cardinal Court, Bldg. 10, Suite 100",
+                "city": "Vancouver",
+                "state": "WA",
+                "zip": "98683",
+                "country": "USA"
+            }
+        }
+    }],
+    "webLinks": [{
+        "type": "webLink",
+        "typeLabel": "Web Link Test",
+        "uri": "http://www.google.com",
+        "title": "Google",
+        "hidden": false
+    }],
+    "browseCategories": [
+        "Data",
+        "Test1"
+    ],
+    "browseTypes": [
+        "GeoTIFF",
+        "Downloadable",
+        "Raster",
+        "Map Service",
+        "Book Citation"
+    ],
+    "tags": [{
+        "type": "Label",
+        "scheme": "ISO 19115 Topic Categories",
+        "name": "imageryBaseMapsEarthCover"
+    }, {
+        "type": "Label",
+        "scheme": "None",
+        "name": "Alaska"
+    }, {
+        "type": "Label",
+        "scheme": "None",
+        "name": "Coast"
+    }, {
+        "type": "Label",
+        "scheme": "None",
+        "name": "Landsat"
+    }, {
+        "type": "Congressional Districts - 113th Session",
+        "scheme": "https://www.sciencebase.gov/vocab/category/Places/CongressionalDistricts/113thSession",
+        "name": "AK-00"
+    }, {
+        "type": "LCC Deliverable",
+        "scheme": "https://www.sciencebase.gov/vocab/category/LCC/Deliverable",
+        "name": "Datasets/Database"
+    }, {
+        "type": "LCC Deliverable",
+        "scheme": "https://www.sciencebase.gov/vocab/category/LCC/Deliverable",
+        "name": "Junk"
+    }, {
+        "type": "Label",
+        "name": "Test"
+    }, {
+        "type": "Label",
+        "scheme": "https://beta.sciencebase.gov/vocab/category/item/browseCategory",
+        "name": "Test1"
+    }, {
+        "type": "Not",
+        "name": "now"
+    }],
+    "dates": [{
+        "type": "Info",
+        "dateString": "2014-02-14",
+        "label": "Info Date Test"
+    }],
+    "facets": [{
+        "files": [{
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif",
+            "contentType": "image/tiff",
+            "contentEncoding": null,
+            "pathOnDisk": "__disk__87/20/c7/8720c7b0db66b323d95aece232ed4772814418f8",
+            "processed": null,
+            "processToken": null,
+            "imageWidth": 3848,
+            "imageHeight": 2121,
+            "dateUploaded": "2014-02-14T20:58:44Z",
+            "uploadedBy": "mrunnels@usgs.gov",
+            "originalMetadata": true,
+            "url": "http://localhost:8090/catalog/file/get/52fe74416f8f4291717d3658?f=__disk__87%2F20%2Fc7%2F8720c7b0db66b323d95aece232ed4772814418f8",
+            "size": 638813
+        }, {
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif.aux.xml",
+            "contentType": "application/xml",
+            "contentEncoding": null,
+            "pathOnDisk": "__grid__52fe84136f8fd5dd40031de6",
+            "processed": null,
+            "processToken": null,
+            "imageWidth": null,
+            "imageHeight": null,
+            "dateUploaded": "2014-02-14T20:58:44Z",
+            "uploadedBy": "mrunnels@usgs.gov",
+            "originalMetadata": null,
+            "url": "http://localhost:8090/catalog/file/get/52fe74416f8f4291717d3658?f=__grid__52fe84136f8fd5dd40031de6",
+            "size": 261
+        }, {
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif.ovr",
+            "contentType": "image/tiff",
+            "contentEncoding": null,
+            "pathOnDisk": "__disk__28/8a/90/288a9024c3a88a7e341c715c8091d948ee20105d",
+            "processed": null,
+            "processToken": null,
+            "imageWidth": 1924,
+            "imageHeight": 1061,
+            "dateUploaded": "2014-02-14T20:58:44Z",
+            "uploadedBy": "mrunnels@usgs.gov",
+            "originalMetadata": null,
+            "url": "http://localhost:8090/catalog/file/get/52fe74416f8f4291717d3658?f=__disk__28%2F8a%2F90%2F288a9024c3a88a7e341c715c8091d948ee20105d",
+            "size": 338723
+        }, {
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif.xml",
+            "contentType": "application/fgdc+xml",
+            "contentEncoding": null,
+            "pathOnDisk": "__grid__52fe84136f8fd5dd40031de7",
+            "processed": null,
+            "processToken": null,
+            "imageWidth": null,
+            "imageHeight": null,
+            "dateUploaded": "2014-02-14T20:58:44Z",
+            "uploadedBy": "mrunnels@usgs.gov",
+            "originalMetadata": null,
+            "url": "http://localhost:8090/catalog/file/get/52fe74416f8f4291717d3658?f=__grid__52fe84136f8fd5dd40031de7",
+            "size": 2767
+        }],
+        "boundingBox": {
+            "maxY": 45.0528658360911,
+            "maxX": -103.82575393490978,
+            "minX": -111.2802631688945,
+            "minY": 40.943974441787155
+        },
+        "rasterType": "GeoTIFF",
+        "name": "sample_raster_color_map.tif/sample_raster_color_map.tif",
+        "nativeCrs": "EPSG:4326",
+        "className": "gov.sciencebase.catalog.item.facet.RasterFacet"
+    }, {
+        "files": [{
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif",
+            "contentType": "image/tiff",
+            "contentEncoding": null,
+            "pathOnDisk": "__disk__03/91/74/0391748dfc41aec41b7421b32867bff21872f9da",
+            "processed": null,
+            "processToken": null,
+            "imageWidth": 3848,
+            "imageHeight": 2121,
+            "dateUploaded": "2014-02-14T21:00:58Z",
+            "uploadedBy": "mrunnels@usgs.gov",
+            "originalMetadata": true,
+            "url": "http://localhost:8090/catalog/file/get/52fe74416f8f4291717d3658?f=__disk__03%2F91%2F74%2F0391748dfc41aec41b7421b32867bff21872f9da",
+            "size": 638813
+        }, {
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif.aux.xml",
+            "contentType": "application/xml",
+            "contentEncoding": null,
+            "pathOnDisk": "__grid__52fe84136f8fd5dd40031de8",
+            "processed": null,
+            "processToken": null,
+            "imageWidth": null,
+            "imageHeight": null,
+            "dateUploaded": "2014-02-14T21:00:58Z",
+            "uploadedBy": "mrunnels@usgs.gov",
+            "originalMetadata": null,
+            "url": "http://localhost:8090/catalog/file/get/52fe74416f8f4291717d3658?f=__grid__52fe84136f8fd5dd40031de8",
+            "size": 261
+        }, {
+            "name": "sample_raster_color_map.tif/sample_raster_color_map.tif.ovr",
+            "contentType": "image/tiff",
+            "contentEncoding": null,
+            "pathOnDisk": "__disk__33/6c/14/336c1416c925ed0ef41fdcce90ffd7ea5e68df70",
+            "processed": null,
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