yabplot 0.1.1__tar.gz → 0.1.3__tar.gz

{yabplot-0.1.1/yabplot.egg-info → yabplot-0.1.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: yabplot
-Version: 0.1.1
+Version: 0.1.3
 Summary: yet another brain plot
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown

{yabplot-0.1.1 → yabplot-0.1.3}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "yabplot"
-version = "0.1.1"
+version = "0.1.3"
 description = "yet another brain plot"
 readme = "README.md"
 requires-python = ">=3.10"

{yabplot-0.1.1 → yabplot-0.1.3}/tests/test_smoke.py

@@ -17,4 +17,22 @@ def test_plotter_instantiation():
     plotter = pv.Plotter(off_screen=True)
     plotter.add_mesh(pv.Sphere())
     plotter.show()
-    plotter.close()
+    plotter.close()
+
+def test_plot_cortical():
+    """
+    Integration test: Downloads 'aparc' and plots it.
+    """
+    yab.plot_cortical(atlas='aparc', display_type='none')
+
+def test_plot_subcortical():
+    """
+    Integration test: Downloads 'aseg' and plots it.
+    """
+    yab.plot_subcortical(atlas='aseg', display_type='none')
+
+def test_plot_tracts():
+    """
+    Integration test: Downloads 'xtract_tiny' and plots it.
+    """
+    yab.plot_tracts(atlas='xtract_tiny', display_type='none')

{yabplot-0.1.1 → yabplot-0.1.3}/yabplot/data/__init__.py

@@ -332,7 +332,7 @@ def _find_subcortical_files(atlas_dir):
 
 def _find_tract_files(atlas_dir):
     """
-    Internal: Scans directory for tractography files (.trk).
+    Internal: Scans directory for tractography files (.trk or .tck).
     Returns a dictionary: {tract_name: file_path}
     """
     
@@ -356,14 +356,15 @@ def _find_tract_files(atlas_dir):
             
         return candidates
 
-    # find .trk files
-    trk_files = _scan_for_ext(atlas_dir, ".trk")
+    # scan for both .trk and .tck
+    found_files = _scan_for_ext(atlas_dir, ".trk") + _scan_for_ext(atlas_dir, ".tck")
     
-    if not trk_files:
-        raise FileNotFoundError(f"No .trk files found in {atlas_dir}")
+    if not found_files:
+        raise FileNotFoundError(f"No .trk or .tck files found in {atlas_dir}")
 
     # map basename -> full path
     return {
         os.path.splitext(os.path.basename(f))[0]: f 
-        for f in trk_files
-    }
+        for f in found_files
+    }
+

{yabplot-0.1.1 → yabplot-0.1.3}/yabplot/data/registry.txt

@@ -8,9 +8,8 @@ cortical-schaefer_1000.zip sha256:a10448f101a874499d41bc62508c3af29120634955f48b
 subcortical-aseg.zip sha256:a901a7fc6a39f9bdaf2ef2bafbcde1fbc085b225d99e6730c727650d9be047d5 https://osf.io/5cs7y/download
 subcortical-brainnetome_sc.zip sha256:8301fdf6af109af52a2cf9b06d15486345d457b69cb86169ed38332a34a681c0 https://osf.io/2fsg5/download
 subcortical-jhu.zip sha256:b0ca292589a9f041851dba8159bb605a4657323e4305ba1570a304944b28d0de https://osf.io/x5fhg/download
-subcortical-musus100.zip sha256:7bc0d5b6a7e90a18cf8399f76976202d0263ff4e6823f375833bf0073fb89f9e https://osf.io/mwgz8/download
-subcortical-musus100_dbn.zip sha256:a024c048d0210c1699b52aa867d7147f1000168b2a2fdd99f499ee087e23f1d6 https://osf.io/fsv3b/download
-subcortical-musus100_tha.zip sha256:175d5d68eddc5a4b1d5d04cec06d825618cede75b51a5870a3942e737f70bd52 https://osf.io/aj68e/download
+subcortical-musus100_dbn.zip sha256:1d865832a35570a8c67f79d5049b58c548d25cf4fe1853164c384193b6712e40 https://osf.io/eutmb/download
+subcortical-tian2020_sc.zip sha256:8b5caf8bf0cdcf8e259a3532fbcb232f8746d68fc734ca9806d10e70cf8707a3 https://osf.io/jrvgp/download
 tracts-hcp1065_medium.zip sha256:366bb100074cf7b1e55586e5468653f0c342e42cfdd91dca6d99b6fde82f06ff https://osf.io/kjf8e/download
 tracts-hcp1065_small.zip sha256:020f23059c3a20ee0dda8ad12cd3df99b9fe5d3b37e7a6b9ae34b8a52b4b4346 https://osf.io/ynpa5/download
 tracts-hcp1065_tiny.zip sha256:54380d82f5cd234029c6fc011910e00f0ad859fdb6c22c6aaa6452d055449ae9 https://osf.io/jzk7p/download

{yabplot-0.1.1 → yabplot-0.1.3/yabplot.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: yabplot
-Version: 0.1.1
+Version: 0.1.3
 Summary: yet another brain plot
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown