xradio 0.0.54__tar.gz → 0.0.56__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (85) hide show
  1. {xradio-0.0.54/src/xradio.egg-info → xradio-0.0.56}/PKG-INFO +42 -11
  2. {xradio-0.0.54 → xradio-0.0.56}/README.md +14 -2
  3. {xradio-0.0.54 → xradio-0.0.56}/pyproject.toml +39 -9
  4. xradio-0.0.56/src/xradio/_utils/_casacore/casacore_from_casatools.py +991 -0
  5. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/_casacore/tables.py +5 -1
  6. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_casacore/common.py +11 -3
  7. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_casacore/xds_from_casacore.py +45 -46
  8. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_casacore/xds_to_casacore.py +6 -2
  9. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_fits/xds_from_fits.py +27 -43
  10. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/casacore.py +21 -12
  11. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/image.py +1 -1
  12. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/load.py +4 -1
  13. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/load_main_table.py +4 -1
  14. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/read.py +18 -14
  15. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/read_main_table.py +4 -1
  16. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/read_subtables.py +4 -1
  17. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/table_query.py +13 -3
  18. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/write.py +4 -1
  19. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/_tables/write_exp_api.py +4 -1
  20. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/conversion.py +7 -1
  21. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/msv4_info_dicts.py +5 -1
  22. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/msv4_sub_xdss.py +1 -1
  23. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/partition_queries.py +4 -1
  24. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/schema.py +3 -3
  25. {xradio-0.0.54 → xradio-0.0.56/src/xradio.egg-info}/PKG-INFO +42 -11
  26. {xradio-0.0.54 → xradio-0.0.56}/src/xradio.egg-info/SOURCES.txt +1 -0
  27. xradio-0.0.56/src/xradio.egg-info/requires.txt +62 -0
  28. xradio-0.0.54/src/xradio.egg-info/requires.txt +0 -38
  29. {xradio-0.0.54 → xradio-0.0.56}/LICENSE.txt +0 -0
  30. {xradio-0.0.54 → xradio-0.0.56}/MANIFEST.in +0 -0
  31. {xradio-0.0.54 → xradio-0.0.56}/setup.cfg +0 -0
  32. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/__init__.py +0 -0
  33. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/__init__.py +0 -0
  34. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/coord_math.py +0 -0
  35. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/dict_helpers.py +0 -0
  36. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/list_and_array.py +0 -0
  37. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/schema.py +0 -0
  38. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/zarr/__init__.py +0 -0
  39. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/_utils/zarr/common.py +0 -0
  40. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/__init__.py +0 -0
  41. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/__init__.py +0 -0
  42. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_casacore/__init__.py +0 -0
  43. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_zarr/common.py +0 -0
  44. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_zarr/xds_from_zarr.py +0 -0
  45. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_zarr/xds_to_zarr.py +0 -0
  46. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/_zarr/zarr_low_level.py +0 -0
  47. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/common.py +0 -0
  48. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/fits.py +0 -0
  49. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/image_factory.py +0 -0
  50. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/image/_util/zarr.py +0 -0
  51. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/__init__.py +0 -0
  52. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/__init__.py +0 -0
  53. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/chunks.py +0 -0
  54. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/create_antenna_xds.py +0 -0
  55. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/create_field_and_source_xds.py +0 -0
  56. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/descr.py +0 -0
  57. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/msv2_msv3.py +0 -0
  58. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/msv2_to_msv4_meta.py +0 -0
  59. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/optimised_functions.py +0 -0
  60. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/partitions.py +0 -0
  61. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_msv2/subtables.py +0 -0
  62. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_utils/cds.py +0 -0
  63. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_utils/partition_attrs.py +0 -0
  64. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_utils/stokes_types.py +0 -0
  65. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_utils/xds_helper.py +0 -0
  66. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_zarr/encoding.py +0 -0
  67. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_zarr/read.py +0 -0
  68. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/_zarr/write.py +0 -0
  69. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/msv2.py +0 -0
  70. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/_utils/zarr.py +0 -0
  71. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/convert_msv2_to_processing_set.py +0 -0
  72. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/load_processing_set.py +0 -0
  73. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/measurement_set_xdt.py +0 -0
  74. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/open_processing_set.py +0 -0
  75. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/measurement_set/processing_set_xdt.py +0 -0
  76. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/schema/__init__.py +0 -0
  77. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/schema/bases.py +0 -0
  78. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/schema/check.py +0 -0
  79. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/schema/dataclass.py +0 -0
  80. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/schema/metamodel.py +0 -0
  81. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/schema/typing.py +0 -0
  82. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/sphinx/__init__.py +0 -0
  83. {xradio-0.0.54 → xradio-0.0.56}/src/xradio/sphinx/schema_table.py +0 -0
  84. {xradio-0.0.54 → xradio-0.0.56}/src/xradio.egg-info/dependency_links.txt +0 -0
  85. {xradio-0.0.54 → xradio-0.0.56}/src/xradio.egg-info/top_level.txt +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
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  Name: xradio
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- Version: 0.0.54
3
+ Version: 0.0.56
4
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  Summary: Xarray Radio Astronomy Data IO
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5
  Author-email: Jan-Willem Steeb <jsteeb@nrao.edu>, Federico Montesino Pouzols <pouzols@eso.edu>, Dave Mehringer <dmehring@nrao.edu>, Peter Wortmann <peter.wortmann@skao.int>
6
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  License: BSD 3-Clause License
@@ -41,22 +41,21 @@ Requires-Python: <3.14,>=3.11
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  Description-Content-Type: text/markdown
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  License-File: LICENSE.txt
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  Requires-Dist: astropy
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- Requires-Dist: dask
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- Requires-Dist: distributed
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- Requires-Dist: toolviper>=0.0.11
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+ Requires-Dist: toolviper>=0.0.12
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  Requires-Dist: numba>=0.57.0
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- Requires-Dist: numpy
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- Requires-Dist: pytest
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- Requires-Dist: pytest-cov
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- Requires-Dist: pytest-html
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  Requires-Dist: s3fs
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  Requires-Dist: scipy
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  Requires-Dist: xarray
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  Requires-Dist: zarr<3,>=2
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  Requires-Dist: pyarrow
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- Requires-Dist: python_casacore>=3.6.1; sys_platform != "darwin"
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  Requires-Dist: typeguard
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  Requires-Dist: numcodecs<0.16
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+ Provides-Extra: test
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+ Requires-Dist: pytest; extra == "test"
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+ Requires-Dist: pytest-cov; extra == "test"
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+ Requires-Dist: pytest-html; extra == "test"
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+ Provides-Extra: python-casacore
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+ Requires-Dist: python_casacore>=3.6.1; sys_platform != "darwin" and extra == "python-casacore"
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  Provides-Extra: interactive
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  Requires-Dist: matplotlib; extra == "interactive"
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  Requires-Dist: prettytable; extra == "interactive"
@@ -74,6 +73,26 @@ Requires-Dist: sphinx-autosummary-accessors; extra == "docs"
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  Requires-Dist: sphinx_rtd_theme; extra == "docs"
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  Requires-Dist: twine; extra == "docs"
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  Requires-Dist: pandoc; extra == "docs"
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+ Provides-Extra: all
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+ Requires-Dist: pytest; extra == "all"
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+ Requires-Dist: pytest-cov; extra == "all"
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+ Requires-Dist: pytest-html; extra == "all"
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+ Requires-Dist: python_casacore>=3.6.1; sys_platform != "darwin" and extra == "all"
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+ Requires-Dist: matplotlib; extra == "all"
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+ Requires-Dist: prettytable; extra == "all"
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+ Requires-Dist: jupyterlab; extra == "all"
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+ Requires-Dist: ipykernel; extra == "all"
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+ Requires-Dist: ipympl; extra == "all"
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+ Requires-Dist: ipython; extra == "all"
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+ Requires-Dist: jupyter-client; extra == "all"
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+ Requires-Dist: nbsphinx; extra == "all"
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+ Requires-Dist: recommonmark; extra == "all"
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+ Requires-Dist: scanpydoc; extra == "all"
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+ Requires-Dist: sphinx-autoapi; extra == "all"
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+ Requires-Dist: sphinx-autosummary-accessors; extra == "all"
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+ Requires-Dist: sphinx_rtd_theme; extra == "all"
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+ Requires-Dist: twine; extra == "all"
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+ Requires-Dist: pandoc; extra == "all"
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  Dynamic: license-file
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79
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  # xradio
@@ -93,8 +112,6 @@ It is recommended to use the conda environment manager from [miniforge](https://
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  conda create --name xradio python=3.12 --no-default-packages
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  conda activate xradio
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  ```
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- > 📝 On macOS it is required to pre-install `python-casacore` using `conda install -c conda-forge python-casacore`.
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-
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  XRADIO can now be installed using:
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  ```sh
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  pip install xradio
@@ -103,3 +120,17 @@ This will also install the minimal dependencies for XRADIO. To install the minim
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  ```sh
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  pip install "xradio[interactive]"
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  ```
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+ To enable conversion from MSv2 to MSv4 use (this only works for Linux):
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+ ```sh
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+ pip install "xradio[python-casacore]"
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+ ```
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+ > 📝 On macOS it is required to pre-install `python-casacore` using `conda install -c conda-forge python-casacore`.
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+
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+ To be able to run tests:
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+ ```sh
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+ pip install "xradio[test]"
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+ ```
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+ Multiple-dependencies can be installed using:
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+ ```sh
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+ pip install "xradio[interactive,python-casacore,test]"
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+ ```
@@ -15,8 +15,6 @@ It is recommended to use the conda environment manager from [miniforge](https://
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  conda create --name xradio python=3.12 --no-default-packages
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  conda activate xradio
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  ```
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- > 📝 On macOS it is required to pre-install `python-casacore` using `conda install -c conda-forge python-casacore`.
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-
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  XRADIO can now be installed using:
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  ```sh
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  pip install xradio
@@ -25,3 +23,17 @@ This will also install the minimal dependencies for XRADIO. To install the minim
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  ```sh
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  pip install "xradio[interactive]"
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  ```
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+ To enable conversion from MSv2 to MSv4 use (this only works for Linux):
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+ ```sh
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+ pip install "xradio[python-casacore]"
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+ ```
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+ > 📝 On macOS it is required to pre-install `python-casacore` using `conda install -c conda-forge python-casacore`.
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+
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+ To be able to run tests:
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+ ```sh
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+ pip install "xradio[test]"
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+ ```
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+ Multiple-dependencies can be installed using:
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+ ```sh
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+ pip install "xradio[interactive,python-casacore,test]"
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+ ```
@@ -1,6 +1,6 @@
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  [project]
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  name = "xradio"
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- version = "0.0.54"
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+ version = "v0.0.56"
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  description = " Xarray Radio Astronomy Data IO"
5
5
  authors = [
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  {name = "Jan-Willem Steeb", email="jsteeb@nrao.edu"},
@@ -14,25 +14,33 @@ requires-python = ">= 3.11, < 3.14"
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15
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  dependencies = [
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  'astropy',
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- 'dask',
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- 'distributed',
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- 'toolviper>=0.0.11',
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+ 'toolviper>=0.0.12',
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  'numba>=0.57.0',
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- 'numpy',
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- 'pytest',
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- 'pytest-cov',
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- 'pytest-html',
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  's3fs',
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  'scipy',
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  'xarray',
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  'zarr>=2,<3',
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  'pyarrow',
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- 'python_casacore>=3.6.1; sys_platform != "darwin" ',
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  'typeguard',
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  'numcodecs<0.16'
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26
  ]
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27
 
28
+ # toolviper has the following key dependencies also directly used by XRADIO (https://github.com/casangi/toolviper/blob/main/pyproject.toml):
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+ # 'numpy',
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+ # 'dask',
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+ # 'distributed',
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+
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  [project.optional-dependencies]
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+ test = [
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+ 'pytest',
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+ 'pytest-cov',
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+ 'pytest-html',
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+ ]
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+
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+ python_casacore = [
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+ 'python_casacore>=3.6.1; sys_platform != "darwin"'
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+ ]
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+
36
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  interactive = [
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  'matplotlib',
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  'prettytable',
@@ -54,6 +62,28 @@ docs = [
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  'pandoc'
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  ]
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+ all = [
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+ 'pytest',
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+ 'pytest-cov',
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+ 'pytest-html',
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+ 'python_casacore>=3.6.1; sys_platform != "darwin" ',
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+ 'matplotlib',
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+ 'prettytable',
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+ 'jupyterlab',
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+ 'ipykernel',
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+ 'ipympl',
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+ 'ipython',
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+ 'jupyter-client',
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+ 'nbsphinx',
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+ 'recommonmark',
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+ 'scanpydoc',
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+ 'sphinx-autoapi',
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+ 'sphinx-autosummary-accessors',
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+ 'sphinx_rtd_theme',
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+ 'twine',
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+ 'pandoc'
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+ ]
86
+
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  [tool.pytest.ini_options]
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  addopts = [
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  "--import-mode=importlib",