xarray-behave 0.37.4__tar.gz → 0.37.5__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (56) hide show
  1. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/PKG-INFO +4 -3
  2. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/pyproject.toml +1 -1
  3. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/__init__.py +1 -1
  4. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/das_train.yaml +1 -25
  5. xarray_behave-0.37.4/.github/workflows/test_install.yaml +0 -46
  6. xarray_behave-0.37.4/.gitignore +0 -128
  7. xarray_behave-0.37.4/doc/demo.ipynb +0 -1277
  8. xarray_behave-0.37.4/doc/demo_behavioral_features.ipynb +0 -1720
  9. xarray_behave-0.37.4/doc/demo_behavioral_features_large_group.ipynb +0 -215
  10. xarray_behave-0.37.4/doc/ncb.mplstyle +0 -44
  11. xarray_behave-0.37.4/env/xb.yml +0 -10
  12. xarray_behave-0.37.4/setup.py +0 -25
  13. xarray_behave-0.37.4/tests/test_annot.py +0 -141
  14. xarray_behave-0.37.4/tests/test_assemble.py +0 -118
  15. xarray_behave-0.37.4/tests/test_assemble_metrics.py +0 -58
  16. xarray_behave-0.37.4/tests/test_imports.py +0 -9
  17. xarray_behave-0.37.4/tests/test_io.py +0 -8
  18. xarray_behave-0.37.4/tests/test_sampstamps.py +0 -34
  19. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/LICENSE +0 -0
  20. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/README.md +0 -0
  21. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/annot.py +0 -0
  22. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/event_utils.py +0 -0
  23. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/__init__.py +0 -0
  24. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/app.py +0 -0
  25. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/audio_player.py +0 -0
  26. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/das.py +0 -0
  27. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/formbuilder.py +0 -0
  28. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/das_make.yaml +0 -0
  29. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/das_predict.yaml +0 -0
  30. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/envelope_computation.yaml +0 -0
  31. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/export_for_das.yaml +0 -0
  32. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/from_dir.yaml +0 -0
  33. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/from_file.yaml +0 -0
  34. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/from_zarr.yaml +0 -0
  35. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/forms/spec_freq.yaml +0 -0
  36. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/icon.png +0 -0
  37. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/table.py +0 -0
  38. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/utils.py +0 -0
  39. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/view_dialog.py +0 -0
  40. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/views.py +0 -0
  41. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/gui/widgets.py +0 -0
  42. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/__init__.py +0 -0
  43. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/annotations.py +0 -0
  44. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/annotations_manual.py +0 -0
  45. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/audio.py +0 -0
  46. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/balltracks.py +0 -0
  47. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/movieparams.py +0 -0
  48. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/poses.py +0 -0
  49. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/samplestamps/__init__.py +0 -0
  50. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/samplestamps/samplestamps.py +0 -0
  51. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/samplestamps/utils.py +0 -0
  52. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/timestamps.py +0 -0
  53. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/io/tracks.py +0 -0
  54. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/loaders.py +0 -0
  55. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/metrics.py +0 -0
  56. {xarray_behave-0.37.4 → xarray_behave-0.37.5}/src/xarray_behave/xarray_behave.py +0 -0
@@ -1,6 +1,6 @@
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- Metadata-Version: 2.4
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+ Metadata-Version: 2.5
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  Name: xarray-behave
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- Version: 0.37.4
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+ Version: 0.37.5
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  Summary: xarray tools for behavioral data.
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  Author-email: Jan Clemens <clemensjan@googlemail.com>
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  Requires-Python: >=3.10
@@ -26,7 +26,7 @@ Requires-Dist: soundfile
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  Requires-Dist: librosa>0.8
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  Requires-Dist: opencv-python-headless
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  Requires-Dist: pyvideoreader
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- Requires-Dist: PySide6-Essentials==6.8.*
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+ Requires-Dist: PySide6-Essentials==6.10.*
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  Requires-Dist: pyqtgraph>0.12.2
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  Requires-Dist: qtpy
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  Requires-Dist: superqt
@@ -36,6 +36,7 @@ Requires-Dist: flit ; extra == "dev"
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  Project-URL: documentation, https://janclemenslab.org/das/
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  Project-URL: source, https://github.com/janclemenslab/xarray-behave
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  Provides-Extra: dev
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+ Import-Name: xarray_behave
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  # xarray-behave
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@@ -28,7 +28,7 @@ dependencies = [
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  'librosa>0.8',
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  'opencv-python-headless',
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  'pyvideoreader',
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- 'PySide6-Essentials==6.8.*',
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+ 'PySide6-Essentials==6.10.*',
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  'pyqtgraph>0.12.2',
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  'qtpy',
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  'superqt',
@@ -1,6 +1,6 @@
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  """xarray tools for behavioral data."""
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- __version__ = "0.37.4"
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+ __version__ = "0.37.5"
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  from .xarray_behave import assemble, assemble_metrics, load, save
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  import os
@@ -158,30 +158,6 @@ main:
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  help: Reduce learning rate if performance does not improve after patience epochs.
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- - name: morph
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- label: Postprocessing with trainable morphological kernels
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- type: stacked
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- default: "No"
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- options: "No,Yes"
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-
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- "No":
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-
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- "Yes":
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- - type: text
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- text: 'Clean up predictions using trainable kernels for opening and closing operations.'
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-
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- - name: morph_nb_kernels
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- label: Number of morphological kernels
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- type: int
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- default: 1
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- range: 0, 100
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- - name: morph_kernel_duration
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- label: Duration of morphological kernels (samples)
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- type: int
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- default: 32
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- range: 1,1000
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-
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-
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  - name: postopt
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  label: Optimize postprocessing
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  type: stacked
@@ -285,4 +261,4 @@ main:
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  - name: train
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  label: Start training in GUI
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  type: button
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- default: main action
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+ default: main action
@@ -1,46 +0,0 @@
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- name: Test install
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-
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- on:
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- release:
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- types:
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- - published
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- workflow_dispatch:
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- inputs:
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- logLevel:
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- description: 'Log level'
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- required: true
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- default: 'warning'
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- tags:
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- description: 'manual run'
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-
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- jobs:
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- test:
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- runs-on: ${{ matrix.os }}
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- strategy:
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- fail-fast: False
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- matrix:
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- os: [ubuntu-latest, windows-latest, macOS-latest]
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- defaults: # https://github.com/marketplace/actions/setup-miniconda#use-a-default-shell
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- run:
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- shell: bash -l {0}
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- steps:
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- - uses: actions/checkout@v4
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- - name: Setup miniconda # https://github.com/marketplace/actions/setup-miniconda
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- uses: conda-incubator/setup-miniconda@v3
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- with:
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- auto-update-conda: true
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- auto-activate-base: true
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- channels: conda-forge
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- python-version: 3.13
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- - name: Install OpenGL dependencies
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- run: sudo apt-get update && sudo apt-get install -qq -y libx11-dev libgl1-mesa-dev libxkbcommon-x11-0
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- if: runner.os == 'Linux'
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- - name: Test
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- run: |
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- conda env create -n xb_test -y -f https://raw.githubusercontent.com/janclemenslab/xarray-behave/refs/heads/master/env/xb.yml
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- conda activate xb_test
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- python -c "import xarray_behave; print(xarray_behave.__version__)"
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- python -c "import xarray_behave.gui.app"
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- python tests/test_imports.py
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- python tests/test_io.py
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- python tests/test_sampstamps.py
@@ -1,128 +0,0 @@
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- # Byte-compiled / optimized / DLL files
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- __pycache__/
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- *.py[cod]
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- *$py.class
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-
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- # C extensions
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- *.so
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-
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- # Distribution / packaging
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- .Python
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- build/
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- develop-eggs/
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- dist/
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- downloads/
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- eggs/
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- .eggs/
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- lib/
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- lib64/
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- parts/
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- sdist/
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- var/
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- wheels/
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- *.egg-info/
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- .installed.cfg
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- *.egg
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- MANIFEST
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-
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- # PyInstaller
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- # Usually these files are written by a python script from a template
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- # before PyInstaller builds the exe, so as to inject date/other infos into it.
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- *.manifest
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- *.spec
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-
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- # Installer logs
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- pip-log.txt
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- pip-delete-this-directory.txt
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-
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- # Unit test / coverage reports
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- htmlcov/
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- .tox/
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- .coverage
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- .coverage.*
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- .cache
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- nosetests.xml
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- coverage.xml
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- *.cover
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- .hypothesis/
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- .pytest_cache/
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-
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- # Translations
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- *.mo
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- *.pot
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-
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- # Django stuff:
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- *.log
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- local_settings.py
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- db.sqlite3
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-
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- # Flask stuff:
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- instance/
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- .webassets-cache
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-
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- # Scrapy stuff:
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- .scrapy
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-
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- # Sphinx documentation
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-
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- # PyBuilder
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- target/
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-
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- # Jupyter Notebook
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- .ipynb_checkpoints
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-
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- # pyenv
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- .python-version
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-
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- # celery beat schedule file
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- celerybeat-schedule
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-
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- # SageMath parsed files
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- *.sage.py
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-
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- # Environments
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- .env
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- .venv
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- env/
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- venv/
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- ENV/
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- env.bak/
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- venv.bak/
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-
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- # Spyder project settings
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- .spyderproject
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- .spyproject
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-
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- # Rope project settings
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- .ropeproject
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-
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- # mkdocs documentation
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- /site
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-
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- # mypy
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- .mypy_cache/
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-
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- # MATLAB
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- *.asv
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-
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-
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- # LEAP-specific
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- dat/*
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- dat.*/
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- res*
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- fig*
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- *.err
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- *.out
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-
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- /*
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- /*/
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- !/src/
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- !/tests/
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- !/env/
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- !/docs/
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- !/*.toml
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- !/.github
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- !/conda
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- /src/*.egg-info/
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- /src/*.egg-info
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- /tests/data