wikimoth 0.1.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- wikimoth-0.1.0/LICENSE +201 -0
- wikimoth-0.1.0/PKG-INFO +223 -0
- wikimoth-0.1.0/README.md +191 -0
- wikimoth-0.1.0/pyproject.toml +52 -0
- wikimoth-0.1.0/setup.cfg +4 -0
- wikimoth-0.1.0/tests/test_benchmark.py +339 -0
- wikimoth-0.1.0/tests/test_capture.py +735 -0
- wikimoth-0.1.0/tests/test_capture_invariants.py +147 -0
- wikimoth-0.1.0/tests/test_realistic_corpus.py +137 -0
- wikimoth-0.1.0/tests/test_viewer.py +213 -0
- wikimoth-0.1.0/tests/test_wikimoth.py +492 -0
- wikimoth-0.1.0/wikimoth/__init__.py +32 -0
- wikimoth-0.1.0/wikimoth/benchmark/__init__.py +32 -0
- wikimoth-0.1.0/wikimoth/benchmark/baselines.py +154 -0
- wikimoth-0.1.0/wikimoth/benchmark/corpus.py +273 -0
- wikimoth-0.1.0/wikimoth/benchmark/harness.py +405 -0
- wikimoth-0.1.0/wikimoth/capture/__init__.py +39 -0
- wikimoth-0.1.0/wikimoth/capture/buffer.py +143 -0
- wikimoth-0.1.0/wikimoth/capture/config.py +128 -0
- wikimoth-0.1.0/wikimoth/capture/hook.py +116 -0
- wikimoth-0.1.0/wikimoth/capture/install.py +168 -0
- wikimoth-0.1.0/wikimoth/capture/links.py +217 -0
- wikimoth-0.1.0/wikimoth/capture/note.py +274 -0
- wikimoth-0.1.0/wikimoth/capture/recall.py +107 -0
- wikimoth-0.1.0/wikimoth/cli.py +166 -0
- wikimoth-0.1.0/wikimoth/compaction.py +148 -0
- wikimoth-0.1.0/wikimoth/hybrid.py +174 -0
- wikimoth-0.1.0/wikimoth/pipeline.py +389 -0
- wikimoth-0.1.0/wikimoth/reader.py +135 -0
- wikimoth-0.1.0/wikimoth/retrieval/__init__.py +32 -0
- wikimoth-0.1.0/wikimoth/retrieval/chunk.py +32 -0
- wikimoth-0.1.0/wikimoth/retrieval/chunking.py +58 -0
- wikimoth-0.1.0/wikimoth/retrieval/graph.py +301 -0
- wikimoth-0.1.0/wikimoth/tokens.py +59 -0
- wikimoth-0.1.0/wikimoth/viewer.py +470 -0
- wikimoth-0.1.0/wikimoth.egg-info/PKG-INFO +223 -0
- wikimoth-0.1.0/wikimoth.egg-info/SOURCES.txt +39 -0
- wikimoth-0.1.0/wikimoth.egg-info/dependency_links.txt +1 -0
- wikimoth-0.1.0/wikimoth.egg-info/entry_points.txt +2 -0
- wikimoth-0.1.0/wikimoth.egg-info/requires.txt +21 -0
- wikimoth-0.1.0/wikimoth.egg-info/top_level.txt +1 -0
wikimoth-0.1.0/LICENSE
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Copyright 2026 Julian Geymonat
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wikimoth-0.1.0/PKG-INFO
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Metadata-Version: 2.4
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Name: wikimoth
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Version: 0.1.0
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Summary: Deterministic, token-minimal, reproducible memory for Claude and agents: wikilink-graph retrieval, then compaction, then a Claude reader.
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Author: Julian Geymonat
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License: Apache-2.0
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Project-URL: Homepage, https://github.com/juliangeymonat-jpg/wikimoth
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Keywords: rag,memory,agents,claude,wikilinks,multi-hop,deterministic
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Classifier: Programming Language :: Python :: 3
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Classifier: License :: OSI Approved :: Apache Software License
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Classifier: Intended Audience :: Developers
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Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
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Requires-Python: >=3.10
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Description-Content-Type: text/markdown
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License-File: LICENSE
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Provides-Extra: hybrid
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Requires-Dist: rank_bm25; extra == "hybrid"
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Provides-Extra: dense
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Requires-Dist: transformers; extra == "dense"
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Requires-Dist: torch; extra == "dense"
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Requires-Dist: numpy; extra == "dense"
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Provides-Extra: claude
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Requires-Dist: anthropic; extra == "claude"
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Provides-Extra: tokens
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Requires-Dist: tiktoken; extra == "tokens"
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Provides-Extra: headroom
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Requires-Dist: headroom; extra == "headroom"
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Provides-Extra: dev
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Requires-Dist: pytest>=7; extra == "dev"
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Dynamic: license-file
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# WikiMoth
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### Connects the dots. The same way, every time.
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**Deterministic, token-minimal, auditable memory for Claude and agents.** Point WikiMoth at a
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folder of `[[wikilink]]` notes (an Obsidian vault, or Claude's own memory folder) and it
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follows the authored links to the answer flat search can't reach, shows you the exact note-chain
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behind it, and feeds the reader ~99% fewer tokens than pasting the whole vault. Pure markdown,
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no GPU, no vector DB, no LLM in the retrieval loop.
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```bash
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pip install wikimoth
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wikimoth install # capture: turn your Claude Code sessions into a [[wikilink]] vault
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wikimoth serve # browse the vault + see "what memory fed this answer"
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```
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---
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## Why WikiMoth
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Most agent memory is either *paste the whole notes folder into context* (expensive, and the model
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gets lost in the middle) or *LLM-summarised similarity search* (lossy, and non-deterministic:
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|
+
the same question can return different memory next week). WikiMoth takes a different bet: your notes
|
|
56
|
+
**are** the store (plain markdown), the graph is **authored** (your `[[wikilinks]]`, no embeddings
|
|
57
|
+
to train or drift), and retrieval is **code, not a model**, so it's reproducible and you can read
|
|
58
|
+
exactly why each note was chosen.
|
|
59
|
+
|
|
60
|
+
| | **WikiMoth** | BM25 | Vector RAG | claude-mem | LLM Wiki (Karpathy) |
|
|
61
|
+
|---|:--:|:--:|:--:|:--:|:--:|
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|
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|
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| Connects the dots (multi-hop over authored `[[links]]`) | ✅ | ❌ | ❌ | ❌ | ✅ *(agentic)* |
|
|
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|
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| Deterministic retrieval (same query → same result) | ✅ | ✅ | ✅ | ❌ | ❌ |
|
|
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| No LLM call to retrieve | ✅ | ✅ | ✅ | ~ | ❌ |
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| Auditable note-chain (which notes produced the answer) | ✅ | ~ | ❌ | ❌ | ~ |
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| Direct-lookup recall@8 (real vault) | 1.00 | 1.00 | 1.00 | ~ | ~ |
|
|
67
|
+
| No GPU / no vector DB / no index build | ✅ | ✅ | ❌ | ~ | ✅ |
|
|
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|
+
| Plain-markdown store (open in any editor) | ✅ | ~ | ❌ | ❌ | ✅ |
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|
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|
+
| Token-minimal vs dumping the vault | ✅ −99% | ✅ −99% | ✅ −99% | ✅ | ~ |
|
|
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|
+
| Deterministic, API-free auto-capture | ✅ | ❌ | ❌ | ❌ | ❌ |
|
|
71
|
+
|
|
72
|
+
<sub>LLM Wiki *follows* links and skips the vector DB like WikiMoth, but an **LLM writes and reads** the wiki, so retrieval is agentic (an LLM call per recall, not reproducible), while its curated pages are richer. `~` = partial / not independently benchmarked.</sub>
|
|
73
|
+
|
|
74
|
+
The edge is the **combination**, not higher recall: WikiMoth *matches* flat search on the basics and
|
|
75
|
+
adds connect-the-dots + determinism + an audit trail + a plain-markdown store. See
|
|
76
|
+
[Honest limits](#honest-limits) for exactly where it ties and where it wins.
|
|
77
|
+
|
|
78
|
+
### Compared to Karpathy's LLM Wiki
|
|
79
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+
|
|
80
|
+
WikiMoth shares the substrate Andrej Karpathy's *LLM Wiki* pattern popularised: plain-markdown
|
|
81
|
+
`[[wikilink]]` notes, no vector DB, but flips the **engine**. In the LLM-Wiki pattern an **LLM
|
|
82
|
+
writes *and* reads** the wiki: rich, source-cited pages, but recall is *agentic* (it costs an LLM
|
|
83
|
+
call and the path isn't reproducible). WikiMoth computes the edges in **code** and retrieves with a
|
|
84
|
+
**fixed algorithm, no LLM in the loop** → the same note-chain every time, reproducible and
|
|
85
|
+
auditable. They're complementary, not competing: point WikiMoth at a Karpathy-style wiki and you get
|
|
86
|
+
deterministic multi-hop retrieval over it. (We don't claim to be "better" than the LLM Wiki: it
|
|
87
|
+
curates richer pages; we retrieve deterministically.)
|
|
88
|
+
|
|
89
|
+
## Quickstart (read)
|
|
90
|
+
|
|
91
|
+
```python
|
|
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|
+
from wikimoth import MemoryRAG, EchoReader
|
|
93
|
+
|
|
94
|
+
rag = MemoryRAG(reader=EchoReader()) # API-free default reader
|
|
95
|
+
rag.index("path/to/your/wikilink/vault") # notes → ~400-token chunks, graph built
|
|
96
|
+
|
|
97
|
+
chunks, tokens = rag.retrieve("a connect-the-dots question?", top_k=8)
|
|
98
|
+
print(f"{len(chunks)} chunks, {tokens} tokens to feed the reader")
|
|
99
|
+
|
|
100
|
+
print(rag.answer("a connect-the-dots question?")) # retrieve → compact → read
|
|
101
|
+
```
|
|
102
|
+
|
|
103
|
+
Swap in a real Claude answer (only touches the API when constructed):
|
|
104
|
+
|
|
105
|
+
```python
|
|
106
|
+
from wikimoth import MemoryRAG, ClaudeReader
|
|
107
|
+
rag = MemoryRAG(reader=ClaudeReader(model="claude-sonnet-4-6")) # needs ANTHROPIC_API_KEY
|
|
108
|
+
```
|
|
109
|
+
|
|
110
|
+
## See what memory fed an answer: `wikimoth serve`
|
|
111
|
+
|
|
112
|
+
```bash
|
|
113
|
+
wikimoth serve # serves http://127.0.0.1:8765 (local-only)
|
|
114
|
+
wikimoth serve --vault PATH --port 8080
|
|
115
|
+
```
|
|
116
|
+
|
|
117
|
+
A zero-dependency local web viewer (pure stdlib, no Flask, no JS framework, no network):
|
|
118
|
+
|
|
119
|
+
- **browse + search** your notes,
|
|
120
|
+
- the authored **`[[wikilink]]` graph** (the same edges the retriever walks),
|
|
121
|
+
- and the one that matters, **"what memory fed this answer"**: type a question and see the exact
|
|
122
|
+
note-chain WikiMoth would feed a reader, with per-chunk hop distance, token counts, and the `−N%`
|
|
123
|
+
vs dumping the whole vault. Retrieval only: no LLM call, no API key, deterministic.
|
|
124
|
+
|
|
125
|
+
Because the store is plain markdown, you can equally open the same vault in Obsidian or VS Code;
|
|
126
|
+
the viewer is a convenience, not a lock-in.
|
|
127
|
+
|
|
128
|
+
## Capture: sessions → notes (the write half)
|
|
129
|
+
|
|
130
|
+
Retrieval needs a `[[wikilink]]` vault; hand-authoring one is the friction. `wikimoth.capture` builds
|
|
131
|
+
it automatically by installing Claude Code lifecycle hooks that turn each session into **one**
|
|
132
|
+
deterministic markdown note.
|
|
133
|
+
|
|
134
|
+
**The invariant that matters:** a note's `[[wikilinks]]` (the graph edges) are computed by code
|
|
135
|
+
(string/path matching), **never by a model**. An LLM may *optionally* draft the summary prose
|
|
136
|
+
(`WIKIMOTH_LLM_PROSE=1`), but any `[[...]]` it emits is stripped, never parsed as an edge. So the
|
|
137
|
+
graph is reproducible (same session + vault → same edges) and auditable. Default capture is fully
|
|
138
|
+
deterministic and makes **zero API calls**.
|
|
139
|
+
|
|
140
|
+
```bash
|
|
141
|
+
wikimoth install # writes 5 hooks into ./.claude/settings.json (absolute interpreter path)
|
|
142
|
+
wikimoth install --user # ~/.claude/settings.json instead
|
|
143
|
+
wikimoth install --vault PATH # choose where notes go (sets WIKIMOTH_VAULT)
|
|
144
|
+
wikimoth status # vault, note/session/buffer counts, hook state
|
|
145
|
+
wikimoth uninstall # remove the hooks again
|
|
146
|
+
```
|
|
147
|
+
|
|
148
|
+
Lifecycle: **SessionStart** recalls recent sessions into context · **UserPromptSubmit / PostToolUse**
|
|
149
|
+
buffer the session · **Stop / SessionEnd** write one note. The captured notes are exactly what the
|
|
150
|
+
read pipeline indexes; capture and retrieval close the loop.
|
|
151
|
+
|
|
152
|
+
## Install
|
|
153
|
+
|
|
154
|
+
WikiMoth's core is **pure stdlib** (`dependencies = []`): the retrieval engine, chunker, wikilink
|
|
155
|
+
graph, pipeline and capture are all vendored under `wikimoth/`: nothing extra to install, no GPU, no
|
|
156
|
+
vector DB.
|
|
157
|
+
|
|
158
|
+
```bash
|
|
159
|
+
pip install wikimoth
|
|
160
|
+
# before the PyPI release, install from source:
|
|
161
|
+
pip install "git+https://github.com/juliangeymonat-jpg/wikimoth"
|
|
162
|
+
# optional extras:
|
|
163
|
+
pip install "wikimoth[hybrid]" # BM25-seeded HybridRetriever (best direct-lookup + multi-hop)
|
|
164
|
+
pip install "wikimoth[claude,tokens]" # real Claude reader + exact tiktoken counts
|
|
165
|
+
```
|
|
166
|
+
|
|
167
|
+
Extras: `hybrid` = BM25-seeded retriever (`rank_bm25`) · `claude` = the `anthropic` reader ·
|
|
168
|
+
`tokens` = exact token counts (`tiktoken`) · `dense` = the dense benchmark baseline · `headroom` =
|
|
169
|
+
reversible CCR compaction.
|
|
170
|
+
|
|
171
|
+
## How it works
|
|
172
|
+
|
|
173
|
+
**retrieve → compact → read.** `index()` splits each note into ~400-token chunks (~50 overlap),
|
|
174
|
+
keeping per-chunk note identity so the `[[wikilink]]` graph still connects across chunks (multi-hop
|
|
175
|
+
at chunk granularity). `GraphRetriever(source="wikilinks")` seeds lexically, then walks the authored
|
|
176
|
+
links, so a passage *not* lexically similar to the question but *reachable by a link* still gets
|
|
177
|
+
pulled. An optional compaction stage (reversible CCR via
|
|
178
|
+
[`chopratejas/headroom`](https://github.com/chopratejas/headroom)) shrinks passages further before
|
|
179
|
+
the (paid) reader; it degrades to a no-op if headroom isn't installed.
|
|
180
|
+
|
|
181
|
+
A pure-navigation hub (a table-of-contents like `MEMORY.md`) can be indexed as **graph edges only**
|
|
182
|
+
(`exclude_content`, default `("MEMORY.md",)`): its `[[links]]` build edges and it stays a BFS
|
|
183
|
+
waypoint, but its own chunks never reach the reader.
|
|
184
|
+
|
|
185
|
+
Every stage is constructor-injectable via `MemoryRAG(retriever=…, compactor=…, reader=…)`, so you can
|
|
186
|
+
swap the retriever (e.g. the BM25-seeded `HybridRetriever`), the compactor, or the reader.
|
|
187
|
+
|
|
188
|
+
## Benchmark: tokens fed to the reader
|
|
189
|
+
|
|
190
|
+
`wikimoth.benchmark.harness` measures *tokens fed to the reader* (what you actually pay for) across
|
|
191
|
+
arms over the **same** vault and questions:
|
|
192
|
+
|
|
193
|
+
| arm | feeds the reader | status |
|
|
194
|
+
|---|---|---|
|
|
195
|
+
| `dump` | the whole vault | baseline |
|
|
196
|
+
| `deterministic` | wikilink-graph retrieval | implemented |
|
|
197
|
+
| `deterministic_compacted` | retrieval + Headroom | implemented |
|
|
198
|
+
| `agentic` | an LLM iteratively browses & picks | stub (needs LLM tool-calls) |
|
|
199
|
+
|
|
200
|
+
No paid API calls run by default; every arm's reader defaults to the API-free `EchoReader`.
|
|
201
|
+
|
|
202
|
+
## Honest limits
|
|
203
|
+
|
|
204
|
+
WikiMoth's value is **deterministic, auditable, token-minimal, plain-markdown** memory with a real
|
|
205
|
+
multi-hop capability, not "better retrieval than BM25". Specifically:
|
|
206
|
+
|
|
207
|
+
- **The −99% is vs *dumping the vault*** (≈5k vs ~482k tokens on a real 356-note vault), not vs
|
|
208
|
+
BM25: a tuned BM25-RAG also feeds ~5k. The win is against the realistic status quo (paste
|
|
209
|
+
everything / naive whole-note RAG), and it's deterministic.
|
|
210
|
+
- **On a typical real vault, retrieval ≈ BM25.** Direct-lookup recall@8 ties at 1.00. The
|
|
211
|
+
multi-hop / connect-the-dots win (0% → up to 100% where flat search scores zero) shows up on
|
|
212
|
+
**curated, link-heavy** corpora; on an average vault, hybrid is *never worse than BM25*, not
|
|
213
|
+
strictly better on recall.
|
|
214
|
+
- **Determinism** is inherent to any static retriever (BM25/dense too); WikiMoth's determinism win is
|
|
215
|
+
specifically **vs LLM-summarised memory** (which varies run to run).
|
|
216
|
+
- The `agentic` benchmark arm and a published large-scale capture dogfood are not done yet.
|
|
217
|
+
|
|
218
|
+
## Pluggable + License
|
|
219
|
+
|
|
220
|
+
`MemoryRAG(retriever=…, compactor=…, reader=…)`; defaults `GraphRetriever(source="wikilinks")` /
|
|
221
|
+
`NoOpCompactor` / `EchoReader`. Anything satisfying the small Protocols drops in.
|
|
222
|
+
|
|
223
|
+
Apache-2.0; see [LICENSE](LICENSE). © 2026 Julian Geymonat.
|
wikimoth-0.1.0/README.md
ADDED
|
@@ -0,0 +1,191 @@
|
|
|
1
|
+
# WikiMoth
|
|
2
|
+
|
|
3
|
+
### Connects the dots. The same way, every time.
|
|
4
|
+
|
|
5
|
+
**Deterministic, token-minimal, auditable memory for Claude and agents.** Point WikiMoth at a
|
|
6
|
+
folder of `[[wikilink]]` notes (an Obsidian vault, or Claude's own memory folder) and it
|
|
7
|
+
follows the authored links to the answer flat search can't reach, shows you the exact note-chain
|
|
8
|
+
behind it, and feeds the reader ~99% fewer tokens than pasting the whole vault. Pure markdown,
|
|
9
|
+
no GPU, no vector DB, no LLM in the retrieval loop.
|
|
10
|
+
|
|
11
|
+
```bash
|
|
12
|
+
pip install wikimoth
|
|
13
|
+
wikimoth install # capture: turn your Claude Code sessions into a [[wikilink]] vault
|
|
14
|
+
wikimoth serve # browse the vault + see "what memory fed this answer"
|
|
15
|
+
```
|
|
16
|
+
|
|
17
|
+
---
|
|
18
|
+
|
|
19
|
+
## Why WikiMoth
|
|
20
|
+
|
|
21
|
+
Most agent memory is either *paste the whole notes folder into context* (expensive, and the model
|
|
22
|
+
gets lost in the middle) or *LLM-summarised similarity search* (lossy, and non-deterministic:
|
|
23
|
+
the same question can return different memory next week). WikiMoth takes a different bet: your notes
|
|
24
|
+
**are** the store (plain markdown), the graph is **authored** (your `[[wikilinks]]`, no embeddings
|
|
25
|
+
to train or drift), and retrieval is **code, not a model**, so it's reproducible and you can read
|
|
26
|
+
exactly why each note was chosen.
|
|
27
|
+
|
|
28
|
+
| | **WikiMoth** | BM25 | Vector RAG | claude-mem | LLM Wiki (Karpathy) |
|
|
29
|
+
|---|:--:|:--:|:--:|:--:|:--:|
|
|
30
|
+
| Connects the dots (multi-hop over authored `[[links]]`) | ✅ | ❌ | ❌ | ❌ | ✅ *(agentic)* |
|
|
31
|
+
| Deterministic retrieval (same query → same result) | ✅ | ✅ | ✅ | ❌ | ❌ |
|
|
32
|
+
| No LLM call to retrieve | ✅ | ✅ | ✅ | ~ | ❌ |
|
|
33
|
+
| Auditable note-chain (which notes produced the answer) | ✅ | ~ | ❌ | ❌ | ~ |
|
|
34
|
+
| Direct-lookup recall@8 (real vault) | 1.00 | 1.00 | 1.00 | ~ | ~ |
|
|
35
|
+
| No GPU / no vector DB / no index build | ✅ | ✅ | ❌ | ~ | ✅ |
|
|
36
|
+
| Plain-markdown store (open in any editor) | ✅ | ~ | ❌ | ❌ | ✅ |
|
|
37
|
+
| Token-minimal vs dumping the vault | ✅ −99% | ✅ −99% | ✅ −99% | ✅ | ~ |
|
|
38
|
+
| Deterministic, API-free auto-capture | ✅ | ❌ | ❌ | ❌ | ❌ |
|
|
39
|
+
|
|
40
|
+
<sub>LLM Wiki *follows* links and skips the vector DB like WikiMoth, but an **LLM writes and reads** the wiki, so retrieval is agentic (an LLM call per recall, not reproducible), while its curated pages are richer. `~` = partial / not independently benchmarked.</sub>
|
|
41
|
+
|
|
42
|
+
The edge is the **combination**, not higher recall: WikiMoth *matches* flat search on the basics and
|
|
43
|
+
adds connect-the-dots + determinism + an audit trail + a plain-markdown store. See
|
|
44
|
+
[Honest limits](#honest-limits) for exactly where it ties and where it wins.
|
|
45
|
+
|
|
46
|
+
### Compared to Karpathy's LLM Wiki
|
|
47
|
+
|
|
48
|
+
WikiMoth shares the substrate Andrej Karpathy's *LLM Wiki* pattern popularised: plain-markdown
|
|
49
|
+
`[[wikilink]]` notes, no vector DB, but flips the **engine**. In the LLM-Wiki pattern an **LLM
|
|
50
|
+
writes *and* reads** the wiki: rich, source-cited pages, but recall is *agentic* (it costs an LLM
|
|
51
|
+
call and the path isn't reproducible). WikiMoth computes the edges in **code** and retrieves with a
|
|
52
|
+
**fixed algorithm, no LLM in the loop** → the same note-chain every time, reproducible and
|
|
53
|
+
auditable. They're complementary, not competing: point WikiMoth at a Karpathy-style wiki and you get
|
|
54
|
+
deterministic multi-hop retrieval over it. (We don't claim to be "better" than the LLM Wiki: it
|
|
55
|
+
curates richer pages; we retrieve deterministically.)
|
|
56
|
+
|
|
57
|
+
## Quickstart (read)
|
|
58
|
+
|
|
59
|
+
```python
|
|
60
|
+
from wikimoth import MemoryRAG, EchoReader
|
|
61
|
+
|
|
62
|
+
rag = MemoryRAG(reader=EchoReader()) # API-free default reader
|
|
63
|
+
rag.index("path/to/your/wikilink/vault") # notes → ~400-token chunks, graph built
|
|
64
|
+
|
|
65
|
+
chunks, tokens = rag.retrieve("a connect-the-dots question?", top_k=8)
|
|
66
|
+
print(f"{len(chunks)} chunks, {tokens} tokens to feed the reader")
|
|
67
|
+
|
|
68
|
+
print(rag.answer("a connect-the-dots question?")) # retrieve → compact → read
|
|
69
|
+
```
|
|
70
|
+
|
|
71
|
+
Swap in a real Claude answer (only touches the API when constructed):
|
|
72
|
+
|
|
73
|
+
```python
|
|
74
|
+
from wikimoth import MemoryRAG, ClaudeReader
|
|
75
|
+
rag = MemoryRAG(reader=ClaudeReader(model="claude-sonnet-4-6")) # needs ANTHROPIC_API_KEY
|
|
76
|
+
```
|
|
77
|
+
|
|
78
|
+
## See what memory fed an answer: `wikimoth serve`
|
|
79
|
+
|
|
80
|
+
```bash
|
|
81
|
+
wikimoth serve # serves http://127.0.0.1:8765 (local-only)
|
|
82
|
+
wikimoth serve --vault PATH --port 8080
|
|
83
|
+
```
|
|
84
|
+
|
|
85
|
+
A zero-dependency local web viewer (pure stdlib, no Flask, no JS framework, no network):
|
|
86
|
+
|
|
87
|
+
- **browse + search** your notes,
|
|
88
|
+
- the authored **`[[wikilink]]` graph** (the same edges the retriever walks),
|
|
89
|
+
- and the one that matters, **"what memory fed this answer"**: type a question and see the exact
|
|
90
|
+
note-chain WikiMoth would feed a reader, with per-chunk hop distance, token counts, and the `−N%`
|
|
91
|
+
vs dumping the whole vault. Retrieval only: no LLM call, no API key, deterministic.
|
|
92
|
+
|
|
93
|
+
Because the store is plain markdown, you can equally open the same vault in Obsidian or VS Code;
|
|
94
|
+
the viewer is a convenience, not a lock-in.
|
|
95
|
+
|
|
96
|
+
## Capture: sessions → notes (the write half)
|
|
97
|
+
|
|
98
|
+
Retrieval needs a `[[wikilink]]` vault; hand-authoring one is the friction. `wikimoth.capture` builds
|
|
99
|
+
it automatically by installing Claude Code lifecycle hooks that turn each session into **one**
|
|
100
|
+
deterministic markdown note.
|
|
101
|
+
|
|
102
|
+
**The invariant that matters:** a note's `[[wikilinks]]` (the graph edges) are computed by code
|
|
103
|
+
(string/path matching), **never by a model**. An LLM may *optionally* draft the summary prose
|
|
104
|
+
(`WIKIMOTH_LLM_PROSE=1`), but any `[[...]]` it emits is stripped, never parsed as an edge. So the
|
|
105
|
+
graph is reproducible (same session + vault → same edges) and auditable. Default capture is fully
|
|
106
|
+
deterministic and makes **zero API calls**.
|
|
107
|
+
|
|
108
|
+
```bash
|
|
109
|
+
wikimoth install # writes 5 hooks into ./.claude/settings.json (absolute interpreter path)
|
|
110
|
+
wikimoth install --user # ~/.claude/settings.json instead
|
|
111
|
+
wikimoth install --vault PATH # choose where notes go (sets WIKIMOTH_VAULT)
|
|
112
|
+
wikimoth status # vault, note/session/buffer counts, hook state
|
|
113
|
+
wikimoth uninstall # remove the hooks again
|
|
114
|
+
```
|
|
115
|
+
|
|
116
|
+
Lifecycle: **SessionStart** recalls recent sessions into context · **UserPromptSubmit / PostToolUse**
|
|
117
|
+
buffer the session · **Stop / SessionEnd** write one note. The captured notes are exactly what the
|
|
118
|
+
read pipeline indexes; capture and retrieval close the loop.
|
|
119
|
+
|
|
120
|
+
## Install
|
|
121
|
+
|
|
122
|
+
WikiMoth's core is **pure stdlib** (`dependencies = []`): the retrieval engine, chunker, wikilink
|
|
123
|
+
graph, pipeline and capture are all vendored under `wikimoth/`: nothing extra to install, no GPU, no
|
|
124
|
+
vector DB.
|
|
125
|
+
|
|
126
|
+
```bash
|
|
127
|
+
pip install wikimoth
|
|
128
|
+
# before the PyPI release, install from source:
|
|
129
|
+
pip install "git+https://github.com/juliangeymonat-jpg/wikimoth"
|
|
130
|
+
# optional extras:
|
|
131
|
+
pip install "wikimoth[hybrid]" # BM25-seeded HybridRetriever (best direct-lookup + multi-hop)
|
|
132
|
+
pip install "wikimoth[claude,tokens]" # real Claude reader + exact tiktoken counts
|
|
133
|
+
```
|
|
134
|
+
|
|
135
|
+
Extras: `hybrid` = BM25-seeded retriever (`rank_bm25`) · `claude` = the `anthropic` reader ·
|
|
136
|
+
`tokens` = exact token counts (`tiktoken`) · `dense` = the dense benchmark baseline · `headroom` =
|
|
137
|
+
reversible CCR compaction.
|
|
138
|
+
|
|
139
|
+
## How it works
|
|
140
|
+
|
|
141
|
+
**retrieve → compact → read.** `index()` splits each note into ~400-token chunks (~50 overlap),
|
|
142
|
+
keeping per-chunk note identity so the `[[wikilink]]` graph still connects across chunks (multi-hop
|
|
143
|
+
at chunk granularity). `GraphRetriever(source="wikilinks")` seeds lexically, then walks the authored
|
|
144
|
+
links, so a passage *not* lexically similar to the question but *reachable by a link* still gets
|
|
145
|
+
pulled. An optional compaction stage (reversible CCR via
|
|
146
|
+
[`chopratejas/headroom`](https://github.com/chopratejas/headroom)) shrinks passages further before
|
|
147
|
+
the (paid) reader; it degrades to a no-op if headroom isn't installed.
|
|
148
|
+
|
|
149
|
+
A pure-navigation hub (a table-of-contents like `MEMORY.md`) can be indexed as **graph edges only**
|
|
150
|
+
(`exclude_content`, default `("MEMORY.md",)`): its `[[links]]` build edges and it stays a BFS
|
|
151
|
+
waypoint, but its own chunks never reach the reader.
|
|
152
|
+
|
|
153
|
+
Every stage is constructor-injectable via `MemoryRAG(retriever=…, compactor=…, reader=…)`, so you can
|
|
154
|
+
swap the retriever (e.g. the BM25-seeded `HybridRetriever`), the compactor, or the reader.
|
|
155
|
+
|
|
156
|
+
## Benchmark: tokens fed to the reader
|
|
157
|
+
|
|
158
|
+
`wikimoth.benchmark.harness` measures *tokens fed to the reader* (what you actually pay for) across
|
|
159
|
+
arms over the **same** vault and questions:
|
|
160
|
+
|
|
161
|
+
| arm | feeds the reader | status |
|
|
162
|
+
|---|---|---|
|
|
163
|
+
| `dump` | the whole vault | baseline |
|
|
164
|
+
| `deterministic` | wikilink-graph retrieval | implemented |
|
|
165
|
+
| `deterministic_compacted` | retrieval + Headroom | implemented |
|
|
166
|
+
| `agentic` | an LLM iteratively browses & picks | stub (needs LLM tool-calls) |
|
|
167
|
+
|
|
168
|
+
No paid API calls run by default; every arm's reader defaults to the API-free `EchoReader`.
|
|
169
|
+
|
|
170
|
+
## Honest limits
|
|
171
|
+
|
|
172
|
+
WikiMoth's value is **deterministic, auditable, token-minimal, plain-markdown** memory with a real
|
|
173
|
+
multi-hop capability, not "better retrieval than BM25". Specifically:
|
|
174
|
+
|
|
175
|
+
- **The −99% is vs *dumping the vault*** (≈5k vs ~482k tokens on a real 356-note vault), not vs
|
|
176
|
+
BM25: a tuned BM25-RAG also feeds ~5k. The win is against the realistic status quo (paste
|
|
177
|
+
everything / naive whole-note RAG), and it's deterministic.
|
|
178
|
+
- **On a typical real vault, retrieval ≈ BM25.** Direct-lookup recall@8 ties at 1.00. The
|
|
179
|
+
multi-hop / connect-the-dots win (0% → up to 100% where flat search scores zero) shows up on
|
|
180
|
+
**curated, link-heavy** corpora; on an average vault, hybrid is *never worse than BM25*, not
|
|
181
|
+
strictly better on recall.
|
|
182
|
+
- **Determinism** is inherent to any static retriever (BM25/dense too); WikiMoth's determinism win is
|
|
183
|
+
specifically **vs LLM-summarised memory** (which varies run to run).
|
|
184
|
+
- The `agentic` benchmark arm and a published large-scale capture dogfood are not done yet.
|
|
185
|
+
|
|
186
|
+
## Pluggable + License
|
|
187
|
+
|
|
188
|
+
`MemoryRAG(retriever=…, compactor=…, reader=…)`; defaults `GraphRetriever(source="wikilinks")` /
|
|
189
|
+
`NoOpCompactor` / `EchoReader`. Anything satisfying the small Protocols drops in.
|
|
190
|
+
|
|
191
|
+
Apache-2.0; see [LICENSE](LICENSE). © 2026 Julian Geymonat.
|
|
@@ -0,0 +1,52 @@
|
|
|
1
|
+
[build-system]
|
|
2
|
+
requires = ["setuptools>=68", "wheel"]
|
|
3
|
+
build-backend = "setuptools.build_meta"
|
|
4
|
+
|
|
5
|
+
[project]
|
|
6
|
+
name = "wikimoth"
|
|
7
|
+
version = "0.1.0"
|
|
8
|
+
description = "Deterministic, token-minimal, reproducible memory for Claude and agents: wikilink-graph retrieval, then compaction, then a Claude reader."
|
|
9
|
+
readme = "README.md"
|
|
10
|
+
requires-python = ">=3.10"
|
|
11
|
+
license = { text = "Apache-2.0" }
|
|
12
|
+
authors = [{ name = "Julian Geymonat" }]
|
|
13
|
+
keywords = ["rag", "memory", "agents", "claude", "wikilinks", "multi-hop", "deterministic"]
|
|
14
|
+
classifiers = [
|
|
15
|
+
"Programming Language :: Python :: 3",
|
|
16
|
+
"License :: OSI Approved :: Apache Software License",
|
|
17
|
+
"Intended Audience :: Developers",
|
|
18
|
+
"Topic :: Scientific/Engineering :: Artificial Intelligence",
|
|
19
|
+
]
|
|
20
|
+
|
|
21
|
+
# Core WikiMoth is PURE STDLIB — retrieval (GraphRetriever), chunking, the
|
|
22
|
+
# wikilink graph, the pipeline and capture are all vendored in wikimoth/retrieval/
|
|
23
|
+
# (Julian's own Apache-2.0 code). No hard runtime dependency; everything below
|
|
24
|
+
# is opt-in via extras and import-guarded.
|
|
25
|
+
dependencies = []
|
|
26
|
+
|
|
27
|
+
[project.optional-dependencies]
|
|
28
|
+
# BM25-seeded HybridRetriever (the v2 default for best direct-lookup + multi-hop).
|
|
29
|
+
hybrid = ["rank_bm25"]
|
|
30
|
+
# Dense (semantic) baseline used in the benchmark comparison.
|
|
31
|
+
dense = ["transformers", "torch", "numpy"]
|
|
32
|
+
# Real Claude reader (otherwise EchoReader, the API-free default, is used).
|
|
33
|
+
claude = ["anthropic"]
|
|
34
|
+
# Most representative token counting (else a len//4 estimate is used).
|
|
35
|
+
tokens = ["tiktoken"]
|
|
36
|
+
# Reversible CCR compaction (chopratejas/headroom, Apache-2.0); import-guarded.
|
|
37
|
+
headroom = ["headroom"]
|
|
38
|
+
dev = ["pytest>=7", "rank_bm25"]
|
|
39
|
+
|
|
40
|
+
[project.scripts]
|
|
41
|
+
# `wikimoth install` wires the capture hooks into Claude Code's settings.json
|
|
42
|
+
# (the pip-native equivalent of `npx <tool> install`).
|
|
43
|
+
wikimoth = "wikimoth.cli:main"
|
|
44
|
+
|
|
45
|
+
[project.urls]
|
|
46
|
+
Homepage = "https://github.com/juliangeymonat-jpg/wikimoth"
|
|
47
|
+
|
|
48
|
+
[tool.setuptools.packages.find]
|
|
49
|
+
include = ["wikimoth*"]
|
|
50
|
+
|
|
51
|
+
[tool.pytest.ini_options]
|
|
52
|
+
testpaths = ["tests"]
|
wikimoth-0.1.0/setup.cfg
ADDED