weirdo 2.1.0__tar.gz → 2.1.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (56) hide show
  1. {weirdo-2.1.0/weirdo.egg-info → weirdo-2.1.1}/PKG-INFO +2 -3
  2. {weirdo-2.1.0 → weirdo-2.1.1}/setup.py +1 -2
  3. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/__init__.py +1 -1
  4. {weirdo-2.1.0 → weirdo-2.1.1/weirdo.egg-info}/PKG-INFO +2 -3
  5. {weirdo-2.1.0 → weirdo-2.1.1}/LICENSE +0 -0
  6. {weirdo-2.1.0 → weirdo-2.1.1}/MANIFEST.in +0 -0
  7. {weirdo-2.1.0 → weirdo-2.1.1}/README.md +0 -0
  8. {weirdo-2.1.0 → weirdo-2.1.1}/requirements.txt +0 -0
  9. {weirdo-2.1.0 → weirdo-2.1.1}/setup.cfg +0 -0
  10. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_amino_acids.py +0 -0
  11. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_blosum.py +0 -0
  12. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_hamming.py +0 -0
  13. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_mlp_scorers.py +0 -0
  14. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_ngram.py +0 -0
  15. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_pmbec.py +0 -0
  16. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_scorers.py +0 -0
  17. {weirdo-2.1.0 → weirdo-2.1.1}/test/test_swissprot_reference.py +0 -0
  18. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/amino_acid.py +0 -0
  19. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/amino_acid_alphabet.py +0 -0
  20. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/amino_acid_properties.py +0 -0
  21. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/api.py +0 -0
  22. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/blosum.py +0 -0
  23. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/chou_fasman.py +0 -0
  24. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/cli.py +0 -0
  25. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/common.py +0 -0
  26. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/data_manager.py +0 -0
  27. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/distances.py +0 -0
  28. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/BLOSUM30 +0 -0
  29. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/BLOSUM50 +0 -0
  30. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/BLOSUM62 +0 -0
  31. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/__init__.py +0 -0
  32. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/amino_acid_properties.txt +0 -0
  33. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/helix_vs_coil.txt +0 -0
  34. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/helix_vs_strand.txt +0 -0
  35. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/pmbec.mat +0 -0
  36. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/matrices/strand_vs_coil.txt +0 -0
  37. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/model_manager.py +0 -0
  38. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/peptide_vectorizer.py +0 -0
  39. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/pmbec.py +0 -0
  40. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/reduced_alphabet.py +0 -0
  41. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/residue_contact_energies.py +0 -0
  42. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/__init__.py +0 -0
  43. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/base.py +0 -0
  44. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/config.py +0 -0
  45. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/mlp.py +0 -0
  46. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/reference.py +0 -0
  47. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/registry.py +0 -0
  48. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/similarity.py +0 -0
  49. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/swissprot.py +0 -0
  50. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/scorers/trainable.py +0 -0
  51. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo/static_data.py +0 -0
  52. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo.egg-info/SOURCES.txt +0 -0
  53. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo.egg-info/dependency_links.txt +0 -0
  54. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo.egg-info/entry_points.txt +0 -0
  55. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo.egg-info/requires.txt +0 -0
  56. {weirdo-2.1.0 → weirdo-2.1.1}/weirdo.egg-info/top_level.txt +0 -0
{weirdo-2.1.0/weirdo.egg-info → weirdo-2.1.1}/PKG-INFO RENAMED
@@ -1,16 +1,15 @@
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  Metadata-Version: 2.4
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  Name: weirdo
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- Version: 2.1.0
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+ Version: 2.1.1
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  Summary: Metrics of immunological foreignness for candidate T-cell epitopes
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  Home-page: https://github.com/pirl-unc/weirdo
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  Author: Alex Rubinsteyn
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  Author-email: alex.rubinsteyn@unc.edu
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- License: http://www.apache.org/licenses/LICENSE-2.0.html
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+ License: Apache-2.0
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  Classifier: Development Status :: 4 - Beta
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  Classifier: Environment :: Console
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  Classifier: Operating System :: OS Independent
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  Classifier: Intended Audience :: Science/Research
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- Classifier: License :: OSI Approved :: Apache Software License
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  Classifier: Programming Language :: Python :: 3
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  Classifier: Programming Language :: Python :: 3.9
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  Classifier: Programming Language :: Python :: 3.10
{weirdo-2.1.0 → weirdo-2.1.1}/setup.py RENAMED
@@ -51,13 +51,12 @@ if __name__ == '__main__':
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  author="Alex Rubinsteyn",
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  author_email="alex.rubinsteyn@unc.edu",
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  url="https://github.com/pirl-unc/%s" % PACKAGE_NAME,
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- license="http://www.apache.org/licenses/LICENSE-2.0.html",
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+ license="Apache-2.0",
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  classifiers=[
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  'Development Status :: 4 - Beta',
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  'Environment :: Console',
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  'Operating System :: OS Independent',
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  'Intended Audience :: Science/Research',
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- 'License :: OSI Approved :: Apache Software License',
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  'Programming Language :: Python :: 3',
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  'Programming Language :: Python :: 3.9',
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  'Programming Language :: Python :: 3.10',
{weirdo-2.1.0 → weirdo-2.1.1}/weirdo/__init__.py RENAMED
@@ -55,7 +55,7 @@ from .scorers import (
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  # ML scorer
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  from .scorers import MLPScorer
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- __version__ = "2.1.0"
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+ __version__ = "2.1.1"
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  __all__ = [
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  # Amino acid data
{weirdo-2.1.0 → weirdo-2.1.1/weirdo.egg-info}/PKG-INFO RENAMED
@@ -1,16 +1,15 @@
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  Metadata-Version: 2.4
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  Name: weirdo
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- Version: 2.1.0
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+ Version: 2.1.1
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  Summary: Metrics of immunological foreignness for candidate T-cell epitopes
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  Home-page: https://github.com/pirl-unc/weirdo
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  Author: Alex Rubinsteyn
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  Author-email: alex.rubinsteyn@unc.edu
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- License: http://www.apache.org/licenses/LICENSE-2.0.html
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+ License: Apache-2.0
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  Classifier: Development Status :: 4 - Beta
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  Classifier: Environment :: Console
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  Classifier: Operating System :: OS Independent
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  Classifier: Intended Audience :: Science/Research
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- Classifier: License :: OSI Approved :: Apache Software License
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  Classifier: Programming Language :: Python :: 3
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  Classifier: Programming Language :: Python :: 3.9
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  Classifier: Programming Language :: Python :: 3.10
{weirdo-2.1.0 → weirdo-2.1.1}/LICENSE RENAMED
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