water-column-sonar-processing 0.0.8__tar.gz → 0.0.9__tar.gz

{water_column_sonar_processing-0.0.8/src/water_column_sonar_processing.egg-info → water_column_sonar_processing-0.0.9}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: water_column_sonar_processing
-Version: 0.0.8
+Version: 0.0.9
 Summary: A processing tool for water column sonar data.
 Author-email: Rudy Klucik <rudy.klucik@noaa.gov>
 Project-URL: Homepage, https://github.com/CI-CMG/water-column-sonar-processing

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/pyproject.toml

@@ -7,7 +7,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "water_column_sonar_processing"
-version = "0.0.8"
+version = "0.0.9"
 authors = [
   { name="Rudy Klucik", email="rudy.klucik@noaa.gov" },
 ]

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_create_empty_zarr_store.py

@@ -3,10 +3,12 @@ import numpy as np
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.aws import DynamoDBManager, S3Manager
-from src.water_column_sonar_processing.cruise.create_empty_zarr_store import (
-    CreateEmptyZarrStore,
-)
+from water_column_sonar_processing.aws import DynamoDBManager, S3Manager
+from water_column_sonar_processing.cruise import CreateEmptyZarrStore
+
+
+# from water_column_sonar_processing import DynamoDBManager, S3Manager
+# from water_column_sonar_processing import CreateEmptyZarrStore
 
 
 # TEMPDIR = "/tmp"

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_dynamodb_manager.py

@@ -2,8 +2,8 @@ import numpy as np
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.aws.dynamodb_manager import DynamoDBManager
-from src.water_column_sonar_processing.utility.pipeline_status import PipelineStatus
+from water_column_sonar_processing.aws import DynamoDBManager
+from water_column_sonar_processing.utility import PipelineStatus
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_geometry_manager.py

@@ -2,7 +2,7 @@ import echopype as ep
 import numpy as np
 from dotenv import find_dotenv, load_dotenv
 
-from src.water_column_sonar_processing.geometry.geometry_manager import GeometryManager
+from water_column_sonar_processing.geometry import GeometryManager
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_index.py

@@ -2,8 +2,8 @@ import pytest
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.aws import S3Manager
-from src.water_column_sonar_processing.index.index_manager import IndexManager
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.index import IndexManager
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_pmtile_generation.py

@@ -1,9 +1,7 @@
 import pytest
-import s3fs
 from dotenv import find_dotenv, load_dotenv
-import xarray as xr
 
-from src.water_column_sonar_processing.geometry import PMTileGeneration
+from water_column_sonar_processing.geometry import PMTileGeneration
 
 
 # from src.water_column_sonar_processing.aws import S3Manager

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_process.py

@@ -5,11 +5,11 @@ import numpy as np
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.aws.dynamodb_manager import DynamoDBManager
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
-from src.water_column_sonar_processing.aws.sns_manager import SNSManager
-from src.water_column_sonar_processing.aws.sqs_manager import SQSManager
-from src.water_column_sonar_processing.process import Process
+from water_column_sonar_processing.aws import DynamoDBManager
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.aws import SNSManager
+from water_column_sonar_processing.aws import SQSManager
+from water_column_sonar_processing.process import Process
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_raw_to_zarr.py

@@ -3,8 +3,8 @@ from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 from pathlib import Path
 
-from src.water_column_sonar_processing.aws import DynamoDBManager, S3Manager
-from src.water_column_sonar_processing.processing.raw_to_zarr import RawToZarr
+from water_column_sonar_processing.aws import DynamoDBManager, S3Manager
+from water_column_sonar_processing.processing import RawToZarr
 
 
 # TEMPDIR = "/tmp"

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_resample_regrid.py

@@ -2,7 +2,7 @@ import pytest
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.cruise.resample_regrid import ResampleRegrid
+from water_column_sonar_processing.cruise import ResampleRegrid
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_s3_manager.py

@@ -2,8 +2,8 @@ import os
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.aws import S3Manager
-from src.water_column_sonar_processing.aws.s3_manager import chunked
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.aws import chunked
 
 # from water_column_sonar_processing.aws.s3_manager import S3Manager, chunked
 

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_s3fs_manager.py

@@ -7,8 +7,8 @@ from dotenv import find_dotenv, load_dotenv
 from moto.moto_server.threaded_moto_server import ThreadedMotoServer
 
 
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
-from src.water_column_sonar_processing.aws.s3fs_manager import S3FSManager
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.aws import S3FSManager
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_sns_sqs_manager.py

@@ -4,8 +4,7 @@ import os
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
 
-from src.water_column_sonar_processing.aws.sns_manager import SNSManager
-from src.water_column_sonar_processing.aws.sqs_manager import SQSManager
+from water_column_sonar_processing.aws import SNSManager, SQSManager
 
 
 #######################################################

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9}/tests/test_zarr_manager.py

@@ -7,8 +7,9 @@ import xarray as xr
 import zarr
 from dotenv import find_dotenv, load_dotenv
 from moto import mock_aws
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
-from src.water_column_sonar_processing.model.zarr_manager import ZarrManager
+# from src.water_column_sonar_processing.aws.s3_manager import S3Manager
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.model import ZarrManager
 
 
 #######################################################

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/__init__.py

@@ -1,8 +1,6 @@
 from __future__ import absolute_import
 
 from . import aws, cruise, geometry, index, model, processing, utility
-# from .model import ZarrManager
-# from .process import Process
 
 __all__ = [
     "aws",

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/aws/__init__.py

@@ -1,7 +1,7 @@
 from .dynamodb_manager import DynamoDBManager
-from .s3_manager import S3Manager
+from .s3_manager import S3Manager, chunked
 from .s3fs_manager import S3FSManager
 from .sns_manager import SNSManager
 from .sqs_manager import SQSManager
 
-__all__ = ["DynamoDBManager", "S3Manager", "S3FSManager", "SNSManager", "SQSManager"]
+__all__ = ["DynamoDBManager", "S3Manager", "chunked", "S3FSManager", "SNSManager", "SQSManager"]

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/cruise/create_empty_zarr_store.py

@@ -3,10 +3,10 @@ import os
 import numcodecs
 import numpy as np
 
-from src.water_column_sonar_processing.aws.dynamodb_manager import DynamoDBManager
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
-from src.water_column_sonar_processing.model.zarr_manager import ZarrManager
-from src.water_column_sonar_processing.utility.cleaner import Cleaner
+from water_column_sonar_processing.aws import DynamoDBManager
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.model import ZarrManager
+from water_column_sonar_processing.utility import Cleaner
 
 numcodecs.blosc.use_threads = False
 numcodecs.blosc.set_nthreads(1)

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/cruise/resample_regrid.py

@@ -7,9 +7,9 @@ import numpy as np
 import pandas as pd
 import xarray as xr
 
-from src.water_column_sonar_processing.aws.dynamodb_manager import DynamoDBManager
-from src.water_column_sonar_processing.geometry.geometry_manager import GeometryManager
-from src.water_column_sonar_processing.model.zarr_manager import ZarrManager
+from water_column_sonar_processing.aws import DynamoDBManager
+from water_column_sonar_processing.geometry import GeometryManager
+from water_column_sonar_processing.model import ZarrManager
 
 numcodecs.blosc.use_threads = False
 numcodecs.blosc.set_nthreads(1)

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/geometry/geometry_manager.py

@@ -5,8 +5,8 @@ import geopandas
 import numpy as np
 import pandas as pd
 
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
-from src.water_column_sonar_processing.utility.cleaner import Cleaner
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.utility import Cleaner
 
 """
 //  [Decimal / Places / Degrees	/ Object that can be recognized at scale / N/S or E/W at equator, E/W at 23N/S, E/W at 45N/S, E/W at 67N/S]

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/geometry/pmtile_generation.py

@@ -12,8 +12,6 @@ import pyogrio
 from concurrent.futures import ThreadPoolExecutor, as_completed
 from shapely.geometry import LineString
 
-from src.water_column_sonar_processing.aws import S3Manager, S3FSManager
-
 MAX_POOL_CONNECTIONS = 64
 MAX_CONCURRENCY = 64
 MAX_WORKERS = 64

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/index/index_manager.py

@@ -4,7 +4,7 @@ import pandas as pd
 from datetime import datetime
 from concurrent.futures import ThreadPoolExecutor
 from concurrent.futures import as_completed
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
+from water_column_sonar_processing.aws import S3Manager
 
 
 class IndexManager:

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/model/zarr_manager.py

@@ -5,9 +5,10 @@ import xarray as xr
 import zarr
 from numcodecs import Blosc
 
-from src.water_column_sonar_processing.aws.s3fs_manager import S3FSManager
-from src.water_column_sonar_processing.utility.constants import Constants, Coordinates
-from src.water_column_sonar_processing.utility.timestamp import Timestamp
+from water_column_sonar_processing.aws import S3FSManager
+from water_column_sonar_processing.utility import Constants
+from water_column_sonar_processing.utility import Timestamp
+from water_column_sonar_processing.utility import Coordinates
 
 numcodecs.blosc.use_threads = False
 numcodecs.blosc.set_nthreads(1)

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/process.py

@@ -3,10 +3,10 @@ import os
 
 import numpy as np
 
-from src.water_column_sonar_processing.aws.dynamodb_manager import DynamoDBManager
-from src.water_column_sonar_processing.aws.s3_manager import S3Manager
-from src.water_column_sonar_processing.aws.s3fs_manager import S3FSManager
-from src.water_column_sonar_processing.aws.sns_manager import SNSManager
+from water_column_sonar_processing.aws import DynamoDBManager
+from water_column_sonar_processing.aws import S3Manager
+from water_column_sonar_processing.aws import S3FSManager
+from water_column_sonar_processing.aws import SNSManager
 
 
 ###########################################################

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/processing/cruise_sampler.py

@@ -4,7 +4,7 @@ import echopype as ep
 import numpy as np
 from numcodecs import Blosc
 
-from src.water_column_sonar_processing.utility import Cleaner
+from water_column_sonar_processing.utility import Cleaner
 
 TEMPDIR = "/tmp"
 

{water_column_sonar_processing-0.0.8/src → water_column_sonar_processing-0.0.9}/water_column_sonar_processing/processing/raw_to_zarr.py

@@ -7,9 +7,9 @@ from numcodecs import Blosc
 from datetime import datetime
 from pathlib import Path # , PurePath
 
-from src.water_column_sonar_processing.aws import DynamoDBManager, S3Manager
-from src.water_column_sonar_processing.geometry.geometry_manager import GeometryManager
-from src.water_column_sonar_processing.utility import Cleaner
+from water_column_sonar_processing.aws import DynamoDBManager, S3Manager
+from water_column_sonar_processing.geometry import GeometryManager
+from water_column_sonar_processing.utility import Cleaner
 
 TEMPDIR = "/tmp"
 

water_column_sonar_processing-0.0.9/water_column_sonar_processing/utility/__init__.py

@@ -0,0 +1,6 @@
+from .cleaner import Cleaner
+from .constants import Constants, Coordinates
+from .pipeline_status import PipelineStatus
+from .timestamp import Timestamp
+
+__all__ = ["Cleaner", "Constants", "Coordinates", "PipelineStatus", "Timestamp"]

{water_column_sonar_processing-0.0.8 → water_column_sonar_processing-0.0.9/water_column_sonar_processing.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: water_column_sonar_processing
-Version: 0.0.8
+Version: 0.0.9
 Summary: A processing tool for water column sonar data.
 Author-email: Rudy Klucik <rudy.klucik@noaa.gov>
 Project-URL: Homepage, https://github.com/CI-CMG/water-column-sonar-processing

water_column_sonar_processing-0.0.9/water_column_sonar_processing.egg-info/SOURCES.txt

@@ -0,0 +1,50 @@
+LICENSE
+README.md
+pyproject.toml
+requirements.txt
+tests/test_create_empty_zarr_store.py
+tests/test_dynamodb_manager.py
+tests/test_geometry_manager.py
+tests/test_geometry_simplification.py
+tests/test_index.py
+tests/test_pmtile_generation.py
+tests/test_process.py
+tests/test_raw_to_zarr.py
+tests/test_resample_regrid.py
+tests/test_s3_manager.py
+tests/test_s3fs_manager.py
+tests/test_s3fs_with_moto.py
+tests/test_sns_sqs_manager.py
+tests/test_zarr_manager.py
+water_column_sonar_processing/__init__.py
+water_column_sonar_processing/process.py
+water_column_sonar_processing.egg-info/PKG-INFO
+water_column_sonar_processing.egg-info/SOURCES.txt
+water_column_sonar_processing.egg-info/dependency_links.txt
+water_column_sonar_processing.egg-info/requires.txt
+water_column_sonar_processing.egg-info/top_level.txt
+water_column_sonar_processing/aws/__init__.py
+water_column_sonar_processing/aws/dynamodb_manager.py
+water_column_sonar_processing/aws/s3_manager.py
+water_column_sonar_processing/aws/s3fs_manager.py
+water_column_sonar_processing/aws/sns_manager.py
+water_column_sonar_processing/aws/sqs_manager.py
+water_column_sonar_processing/cruise/__init__.py
+water_column_sonar_processing/cruise/create_empty_zarr_store.py
+water_column_sonar_processing/cruise/resample_regrid.py
+water_column_sonar_processing/geometry/__init__.py
+water_column_sonar_processing/geometry/geometry_manager.py
+water_column_sonar_processing/geometry/geometry_simplification.py
+water_column_sonar_processing/geometry/pmtile_generation.py
+water_column_sonar_processing/index/__init__.py
+water_column_sonar_processing/index/index_manager.py
+water_column_sonar_processing/model/__init__.py
+water_column_sonar_processing/model/zarr_manager.py
+water_column_sonar_processing/processing/__init__.py
+water_column_sonar_processing/processing/cruise_sampler.py
+water_column_sonar_processing/processing/raw_to_zarr.py
+water_column_sonar_processing/utility/__init__.py
+water_column_sonar_processing/utility/cleaner.py
+water_column_sonar_processing/utility/constants.py
+water_column_sonar_processing/utility/pipeline_status.py
+water_column_sonar_processing/utility/timestamp.py

water_column_sonar_processing-0.0.8/src/water_column_sonar_processing/utility/__init__.py

@@ -1,6 +0,0 @@
-from .cleaner import Cleaner
-from .constants import Constants
-from .pipeline_status import PipelineStatus
-from .timestamp import Timestamp
-
-__all__ = ["Cleaner", "Constants", "PipelineStatus", "Timestamp"]

water_column_sonar_processing-0.0.8/src/water_column_sonar_processing.egg-info/SOURCES.txt

@@ -1,50 +0,0 @@
-LICENSE
-README.md
-pyproject.toml
-requirements.txt
-src/water_column_sonar_processing/__init__.py
-src/water_column_sonar_processing/process.py
-src/water_column_sonar_processing.egg-info/PKG-INFO
-src/water_column_sonar_processing.egg-info/SOURCES.txt
-src/water_column_sonar_processing.egg-info/dependency_links.txt
-src/water_column_sonar_processing.egg-info/requires.txt
-src/water_column_sonar_processing.egg-info/top_level.txt
-src/water_column_sonar_processing/aws/__init__.py
-src/water_column_sonar_processing/aws/dynamodb_manager.py
-src/water_column_sonar_processing/aws/s3_manager.py
-src/water_column_sonar_processing/aws/s3fs_manager.py
-src/water_column_sonar_processing/aws/sns_manager.py
-src/water_column_sonar_processing/aws/sqs_manager.py
-src/water_column_sonar_processing/cruise/__init__.py
-src/water_column_sonar_processing/cruise/create_empty_zarr_store.py
-src/water_column_sonar_processing/cruise/resample_regrid.py
-src/water_column_sonar_processing/geometry/__init__.py
-src/water_column_sonar_processing/geometry/geometry_manager.py
-src/water_column_sonar_processing/geometry/geometry_simplification.py
-src/water_column_sonar_processing/geometry/pmtile_generation.py
-src/water_column_sonar_processing/index/__init__.py
-src/water_column_sonar_processing/index/index_manager.py
-src/water_column_sonar_processing/model/__init__.py
-src/water_column_sonar_processing/model/zarr_manager.py
-src/water_column_sonar_processing/processing/__init__.py
-src/water_column_sonar_processing/processing/cruise_sampler.py
-src/water_column_sonar_processing/processing/raw_to_zarr.py
-src/water_column_sonar_processing/utility/__init__.py
-src/water_column_sonar_processing/utility/cleaner.py
-src/water_column_sonar_processing/utility/constants.py
-src/water_column_sonar_processing/utility/pipeline_status.py
-src/water_column_sonar_processing/utility/timestamp.py
-tests/test_create_empty_zarr_store.py
-tests/test_dynamodb_manager.py
-tests/test_geometry_manager.py
-tests/test_geometry_simplification.py
-tests/test_index.py
-tests/test_pmtile_generation.py
-tests/test_process.py
-tests/test_raw_to_zarr.py
-tests/test_resample_regrid.py
-tests/test_s3_manager.py
-tests/test_s3fs_manager.py
-tests/test_s3fs_with_moto.py
-tests/test_sns_sqs_manager.py
-tests/test_zarr_manager.py