vivarium-public-health 4.2.0__tar.gz → 4.2.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (157) hide show
  1. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/CHANGELOG.rst +8 -0
  2. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/PKG-INFO +2 -2
  3. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/setup.py +1 -1
  4. vivarium_public_health-4.2.2/src/vivarium_public_health/_version.py +1 -0
  5. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/population/base_population.py +1 -1
  6. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/PKG-INFO +2 -2
  7. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/requires.txt +1 -1
  8. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/test_low_birth_weight_and_short_gestation.py +1 -7
  9. vivarium_public_health-4.2.0/src/vivarium_public_health/_version.py +0 -1
  10. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.bandit +0 -0
  11. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.flake8 +0 -0
  12. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.gitattributes +0 -0
  13. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.github/CODEOWNERS +0 -0
  14. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.github/pull_request_template.md +0 -0
  15. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.github/workflows/deploy.yml +0 -0
  16. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.gitignore +0 -0
  17. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.pylintrc +0 -0
  18. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.readthedocs.yml +0 -0
  19. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/.zenodo.json +0 -0
  20. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/CODE_OF_CONDUCT.rst +0 -0
  21. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/CONTRIBUTING.rst +0 -0
  22. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/Jenkinsfile +0 -0
  23. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/LICENSE.txt +0 -0
  24. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/MANIFEST.in +0 -0
  25. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/Makefile +0 -0
  26. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/README.rst +0 -0
  27. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/Makefile +0 -0
  28. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/nitpick-exceptions +0 -0
  29. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/_static/style.css +0 -0
  30. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/_templates/layout.html +0 -0
  31. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/disease/index.rst +0 -0
  32. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/disease/model.rst +0 -0
  33. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/disease/models.rst +0 -0
  34. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/disease/special_disease.rst +0 -0
  35. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/disease/state.rst +0 -0
  36. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/disease/transition.rst +0 -0
  37. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/index.rst +0 -0
  38. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/delay.rst +0 -0
  39. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/disease.rst +0 -0
  40. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/index.rst +0 -0
  41. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/intervention.rst +0 -0
  42. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/magic_wand_components.rst +0 -0
  43. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/observer.rst +0 -0
  44. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/mslt/population.rst +0 -0
  45. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/plugins/index.rst +0 -0
  46. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/plugins/parser.rst +0 -0
  47. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/population/add_new_birth_cohorts.rst +0 -0
  48. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/population/base_population.rst +0 -0
  49. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/population/data_transformations.rst +0 -0
  50. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/population/index.rst +0 -0
  51. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/population/mortality.rst +0 -0
  52. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/disability.rst +0 -0
  53. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/disease.rst +0 -0
  54. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/index.rst +0 -0
  55. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/mortality.rst +0 -0
  56. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/observer.rst +0 -0
  57. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/risk.rst +0 -0
  58. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/simple_cause.rst +0 -0
  59. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/results/stratification.rst +0 -0
  60. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/base_risk.rst +0 -0
  61. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/data_transformations.rst +0 -0
  62. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/distributions.rst +0 -0
  63. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/effect.rst +0 -0
  64. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/implementations/index.rst +0 -0
  65. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/implementations/low_birth_weight_and_short_gestation.rst +0 -0
  66. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/risks/index.rst +0 -0
  67. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/treatment/index.rst +0 -0
  68. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/treatment/magic_wand.rst +0 -0
  69. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/treatment/scale_up.rst +0 -0
  70. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/treatment/therapeutic_inertia.rst +0 -0
  71. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/api_reference/utilities.rst +0 -0
  72. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/conf.py +0 -0
  73. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/index.rst +0 -0
  74. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/tutorials/index.rst +0 -0
  75. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/docs/source/tutorials/risk_exposure.rst +0 -0
  76. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/pyproject.toml +0 -0
  77. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/python_versions.json +0 -0
  78. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/setup.cfg +0 -0
  79. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/__about__.py +0 -0
  80. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/__init__.py +0 -0
  81. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/__init__.py +0 -0
  82. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/exceptions.py +0 -0
  83. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/model.py +0 -0
  84. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/models.py +0 -0
  85. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/special_disease.py +0 -0
  86. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/state.py +0 -0
  87. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/disease/transition.py +0 -0
  88. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/__init__.py +0 -0
  89. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/delay.py +0 -0
  90. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/disease.py +0 -0
  91. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/intervention.py +0 -0
  92. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/magic_wand_components.py +0 -0
  93. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/observer.py +0 -0
  94. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/mslt/population.py +0 -0
  95. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/plugins/__init__.py +0 -0
  96. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/plugins/parser.py +0 -0
  97. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/population/__init__.py +0 -0
  98. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/population/add_new_birth_cohorts.py +0 -0
  99. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/population/data_transformations.py +0 -0
  100. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/population/mortality.py +0 -0
  101. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/__init__.py +0 -0
  102. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/columns.py +0 -0
  103. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/disability.py +0 -0
  104. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/disease.py +0 -0
  105. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/mortality.py +0 -0
  106. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/observer.py +0 -0
  107. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/risk.py +0 -0
  108. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/simple_cause.py +0 -0
  109. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/results/stratification.py +0 -0
  110. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/__init__.py +0 -0
  111. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/base_risk.py +0 -0
  112. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/data_transformations.py +0 -0
  113. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/distributions.py +0 -0
  114. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/effect.py +0 -0
  115. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/implementations/__init__.py +0 -0
  116. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/risks/implementations/low_birth_weight_and_short_gestation.py +0 -0
  117. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/treatment/__init__.py +0 -0
  118. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/treatment/magic_wand.py +0 -0
  119. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/treatment/scale_up.py +0 -0
  120. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/treatment/therapeutic_inertia.py +0 -0
  121. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/utilities.py +0 -0
  122. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/SOURCES.txt +0 -0
  123. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/dependency_links.txt +0 -0
  124. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/not-zip-safe +0 -0
  125. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/top_level.txt +0 -0
  126. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/__init__.py +0 -0
  127. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/conftest.py +0 -0
  128. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/data/rr_interpolator.csv +0 -0
  129. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/disease/__init__.py +0 -0
  130. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/disease/test_disease.py +0 -0
  131. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/disease/test_special_disease.py +0 -0
  132. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/mock_artifact.py +0 -0
  133. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/plugins/__init__.py +0 -0
  134. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/plugins/test_parser.py +0 -0
  135. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/population/__init__.py +0 -0
  136. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/population/conftest.py +0 -0
  137. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/population/test_add_new_birth_cohort.py +0 -0
  138. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/population/test_base_population.py +0 -0
  139. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/population/test_data_transformations.py +0 -0
  140. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/population/test_mortality.py +0 -0
  141. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/__init__.py +0 -0
  142. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/test_categorical_risk_observer.py +0 -0
  143. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/test_disability.py +0 -0
  144. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/test_disability_observer.py +0 -0
  145. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/test_disease_observer.py +0 -0
  146. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/test_mortality_observer.py +0 -0
  147. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/results/test_stratification.py +0 -0
  148. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/__init__.py +0 -0
  149. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/conftest.py +0 -0
  150. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/test_base_risk.py +0 -0
  151. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/test_data_transformations.py +0 -0
  152. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/test_distributions.py +0 -0
  153. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/test_effect.py +0 -0
  154. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/test_utilities.py +0 -0
  155. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/treatment/__init__.py +0 -0
  156. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/treatment/test_scale_up.py +0 -0
  157. {vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tox.ini +0 -0
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/CHANGELOG.rst RENAMED
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+ **4.2.2 - 07/03/25**
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+ - Update deprecated layered config tree method from get_from_layer() to get()
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+ **4.2.1 - 06/30/25**
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+ - Bugfix: Fix bug in test for LBWSG exposure data based on simulant age
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  **4.2.0 - 06/11/25**
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  - Feature: Update LBWSG to use exposure data based on simulant age
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/PKG-INFO RENAMED
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  Metadata-Version: 2.4
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  Name: vivarium_public_health
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- Version: 4.2.0
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+ Version: 4.2.2
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  Summary: Components for modelling diseases, risks, and interventions with ``vivarium``
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  Home-page: https://github.com/ihmeuw/vivarium_public_health
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  Author: The vivarium developers
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  Classifier: Topic :: Software Development :: Libraries
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  License-File: LICENSE.txt
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  Requires-Dist: vivarium>=3.4.3
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- Requires-Dist: layered_config_tree>=1.0.1
30
+ Requires-Dist: layered_config_tree>=3.2.0
31
31
  Requires-Dist: loguru
32
32
  Requires-Dist: numpy<2.0.0
33
33
  Requires-Dist: pandas
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/setup.py RENAMED
@@ -43,7 +43,7 @@ if __name__ == "__main__":
43
43
 
44
44
  install_requirements = [
45
45
  "vivarium>=3.4.3",
46
- "layered_config_tree>=1.0.1",
46
+ "layered_config_tree>=3.2.0",
47
47
  "loguru",
48
48
  "numpy<2.0.0",
49
49
  "pandas",
vivarium_public_health-4.2.2/src/vivarium_public_health/_version.py ADDED
@@ -0,0 +1 @@
1
+ __version__ = "4.2.2"
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health/population/base_population.py RENAMED
@@ -183,7 +183,7 @@ class BasePopulation(Component):
183
183
  provided_new_key = False
184
184
  for layer in ["override", "model_override"]:
185
185
  try:
186
- new_key_value = self.config.get_from_layer(mapper[key], layer=layer)
186
+ new_key_value = self.config.get(mapper[key], layer=layer)
187
187
  provided_new_key = True
188
188
  break
189
189
  except ConfigurationKeyError:
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: vivarium_public_health
3
- Version: 4.2.0
3
+ Version: 4.2.2
4
4
  Summary: Components for modelling diseases, risks, and interventions with ``vivarium``
5
5
  Home-page: https://github.com/ihmeuw/vivarium_public_health
6
6
  Author: The vivarium developers
@@ -27,7 +27,7 @@ Classifier: Topic :: Scientific/Engineering :: Physics
27
27
  Classifier: Topic :: Software Development :: Libraries
28
28
  License-File: LICENSE.txt
29
29
  Requires-Dist: vivarium>=3.4.3
30
- Requires-Dist: layered_config_tree>=1.0.1
30
+ Requires-Dist: layered_config_tree>=3.2.0
31
31
  Requires-Dist: loguru
32
32
  Requires-Dist: numpy<2.0.0
33
33
  Requires-Dist: pandas
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/src/vivarium_public_health.egg-info/requires.txt RENAMED
@@ -1,5 +1,5 @@
1
1
  vivarium>=3.4.3
2
- layered_config_tree>=1.0.1
2
+ layered_config_tree>=3.2.0
3
3
  loguru
4
4
  numpy<2.0.0
5
5
  pandas
{vivarium_public_health-4.2.0 → vivarium_public_health-4.2.2}/tests/risks/test_low_birth_weight_and_short_gestation.py RENAMED
@@ -176,7 +176,6 @@ def test_use_exposure(base_config, base_plugins, mock_rr_interpolators, age_end)
176
176
  }
177
177
 
178
178
  # Only have neontal age groups
179
- age_end = 0.0
180
179
  base_config.update(
181
180
  {
182
181
  "population": {
@@ -229,11 +228,6 @@ def test_lbwsg_exposure_data_logging(exposure_key, base_config, mocker, caplog)
229
228
  age_end = 1.0
230
229
 
231
230
  if exposure_key != "missing":
232
- no_data_dict = {
233
- "birth_exposure": "exposure",
234
- "exposure": "birth_exposure",
235
- }
236
- no_data_key = no_data_dict[exposure_key]
237
231
  override_config = {
238
232
  "population": {
239
233
  "initialization_age_start": 0.0,
@@ -260,7 +254,7 @@ def test_lbwsg_exposure_data_logging(exposure_key, base_config, mocker, caplog)
260
254
  assert not caplog.records
261
255
  if exposure_key != "missing":
262
256
  missing_key = "exposure" if exposure_key == "birth_exposure" else "birth_exposure"
263
- sim = InteractiveContext(
257
+ _ = InteractiveContext(
264
258
  base_config,
265
259
  components=[TestPopulation(), risk],
266
260
  configuration=override_config,
vivarium_public_health-4.2.0/src/vivarium_public_health/_version.py DELETED
@@ -1 +0,0 @@
1
- __version__ = "4.2.0"