virtual-casing 0.1.1__tar.gz → 0.2.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (501) hide show
  1. virtual_casing-0.2.2/.github/workflows/test.yml +143 -0
  2. virtual_casing-0.2.2/.github/workflows/wheel.yml +129 -0
  3. virtual_casing-0.2.2/.gitignore +14 -0
  4. virtual_casing-0.2.2/.gitmodules +6 -0
  5. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/CMakeLists.txt +50 -69
  6. virtual_casing-0.2.2/LICENSE +201 -0
  7. virtual_casing-0.2.2/MANIFEST.in +9 -0
  8. virtual_casing-0.2.2/Makefile +105 -0
  9. virtual_casing-0.2.2/PKG-INFO +70 -0
  10. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/README.md +15 -6
  11. virtual_casing-0.2.2/extern/BIEST/.clang-format +38 -0
  12. virtual_casing-0.2.2/extern/BIEST/.gitignore +10 -0
  13. virtual_casing-0.2.2/extern/BIEST/.gitmodules +3 -0
  14. virtual_casing-0.2.2/extern/BIEST/LICENSE +201 -0
  15. virtual_casing-0.2.2/extern/BIEST/Makefile +97 -0
  16. virtual_casing-0.2.2/extern/BIEST/README.md +6 -0
  17. virtual_casing-0.2.2/extern/BIEST/applications/virtual-casing/BetaScan_run_20.Bxyz.txt +4097 -0
  18. virtual_casing-0.2.2/extern/BIEST/applications/virtual-casing/Makefile +40 -0
  19. virtual_casing-0.2.2/extern/BIEST/applications/virtual-casing/ellipse.coils +6454 -0
  20. virtual_casing-0.2.2/extern/BIEST/applications/virtual-casing/virtual-casing.cpp +450 -0
  21. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/.clang-format +36 -0
  22. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/.gitattributes +1 -0
  23. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/.github/workflows/build-test.yml +82 -0
  24. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/.github/workflows/codecov.yml +36 -0
  25. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/.gitignore +9 -0
  26. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/.readthedocs.yaml +32 -0
  27. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/LICENSE +201 -0
  28. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/Makefile +156 -0
  29. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/README.md +112 -0
  30. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/Doxyfile +2850 -0
  31. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/Makefile +19 -0
  32. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/ackn.rst +8 -0
  33. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/conf.py +209 -0
  34. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/boundary_integral.rst +83 -0
  35. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/boundary_quadrature.rst +8 -0
  36. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/cheb_utils.rst +8 -0
  37. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/comm.rst +105 -0
  38. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/common.rst +86 -0
  39. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/fft_wrapper.rst +41 -0
  40. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/fmm-wrapper.rst +46 -0
  41. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/generic-kernel.rst +40 -0
  42. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/index.rst +55 -0
  43. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/iterator.rst +100 -0
  44. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/kernel_functions.rst +36 -0
  45. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/lagrange-interp.rst +32 -0
  46. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/lin-solve.rst +71 -0
  47. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/mat_utils.rst +8 -0
  48. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/math_utils.rst +87 -0
  49. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/matrix.rst +81 -0
  50. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/mem_mgr.rst +37 -0
  51. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/morton.rst +45 -0
  52. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/ode-solver.rst +44 -0
  53. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/ompUtils.rst +44 -0
  54. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/permutation.rst +65 -0
  55. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/profile.rst +57 -0
  56. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/quadrule.rst +58 -0
  57. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/scratch_pool.rst +81 -0
  58. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/sph_harm.rst +8 -0
  59. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/stacktrace.rst +16 -0
  60. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/static-array.rst +54 -0
  61. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/tensor.rst +71 -0
  62. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/tree.rst +90 -0
  63. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/vec.rst +71 -0
  64. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/vector.rst +95 -0
  65. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/doxygen/vtudata.rst +42 -0
  66. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/index.rst +168 -0
  67. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/requirements.txt +5 -0
  68. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/boundaryintegralop.rst +124 -0
  69. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/comm.rst +120 -0
  70. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/fft.rst +119 -0
  71. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/fmm.rst +108 -0
  72. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/gmres-rsult.txt +36 -0
  73. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/gmres.rst +147 -0
  74. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/index.rst +91 -0
  75. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/interp-quadrule.rst +66 -0
  76. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/kernels.rst +86 -0
  77. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/lagrange-interp.rst +117 -0
  78. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/matrix.rst +52 -0
  79. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/permutation.rst +39 -0
  80. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/profile.rst +85 -0
  81. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/sdc.rst +71 -0
  82. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/tensor.rst +75 -0
  83. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/tree.rst +171 -0
  84. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/vec.rst +120 -0
  85. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/vector.rst +72 -0
  86. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/doc/tutorial/vtudata.rst +86 -0
  87. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/boundary_integral.hpp +129 -26
  88. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/boundary_integral.txx +436 -201
  89. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/boundary_quadrature.hpp +102 -7
  90. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/comm.hpp +649 -0
  91. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/comm.txx +2303 -0
  92. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/common.hpp +52 -28
  93. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/experimental/quad_element.cpp +498 -0
  94. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/experimental/quad_element.hpp +190 -0
  95. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/fft_wrapper.hpp +134 -0
  96. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/fft_wrapper.txx +1241 -0
  97. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/fmm-wrapper.hpp +47 -2
  98. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/fmm-wrapper.txx +171 -69
  99. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/generic-kernel.hpp +0 -11
  100. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/generic-kernel.txx +42 -20
  101. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/intrin-wrapper.hpp +15 -17
  102. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/iterator.hpp +6 -14
  103. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/iterator.txx +0 -17
  104. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/kernel_functions.hpp +688 -0
  105. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/lagrange-interp.hpp +14 -4
  106. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/lagrange-interp.txx +45 -11
  107. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/lin-solve.hpp +48 -3
  108. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/lin-solve.txx +151 -65
  109. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/mat_utils.hpp +1 -1
  110. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/mat_utils.txx +7 -7
  111. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/math_utils.hpp +45 -24
  112. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/math_utils.txx +31 -8
  113. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/matrix.hpp +54 -24
  114. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/matrix.txx +66 -29
  115. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/mem_mgr.hpp +7 -5
  116. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/mem_mgr.txx +50 -19
  117. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/morton.hpp +321 -0
  118. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/morton.txx +545 -0
  119. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/ode-solver.hpp +16 -11
  120. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/ode-solver.txx +77 -68
  121. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/ompUtils.hpp +196 -0
  122. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/ompUtils.txx +384 -0
  123. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/permutation.hpp +18 -9
  124. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/permutation.txx +2 -2
  125. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/profile.txx +20 -10
  126. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/quadrule.hpp +4 -1
  127. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/quadrule.txx +13 -13
  128. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/scratch_pool.hpp +143 -0
  129. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/scratch_pool.txx +249 -0
  130. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/sph_harm.hpp +63 -1
  131. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/sph_harm.txx +464 -316
  132. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/stacktrace.h +211 -0
  133. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/tensor.hpp +35 -19
  134. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/tensor.txx +22 -4
  135. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/tree.hpp +26 -24
  136. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/include/sctl/tree.txx +1871 -0
  137. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vec-test.hpp +2 -2
  138. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vec.hpp +5 -8
  139. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vec.txx +1 -3
  140. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vector.hpp +72 -24
  141. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vector.txx +65 -19
  142. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vtudata.hpp +4 -11
  143. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/vtudata.txx +0 -99
  144. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl.hpp +5 -4
  145. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-boundary_integral.cpp +96 -0
  146. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-cheb_utils.cpp +129 -0
  147. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-comm.cpp +359 -0
  148. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-fft-fallback.cpp +461 -0
  149. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-fft.cpp +11 -0
  150. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-fmm.cpp +12 -0
  151. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-generic-kernel.cpp +106 -0
  152. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-gmres.cpp +10 -0
  153. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-intrin-wrapper.cpp +128 -0
  154. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-iterator.cpp +186 -0
  155. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-kernel_functions.cpp +529 -0
  156. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-lagrange-interp.cpp +123 -0
  157. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-linear-solver.cpp +62 -0
  158. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-mat_utils.cpp +115 -0
  159. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-math_utils.cpp +216 -0
  160. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-matrix.cpp +267 -0
  161. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-mem_mgr.cpp +139 -0
  162. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-morton.cpp +248 -0
  163. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-ode-solver.cpp +34 -0
  164. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-ompUtils.cpp +177 -0
  165. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-permutation.cpp +156 -0
  166. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-profile.cpp +114 -0
  167. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-pt-tree.cpp +10 -0
  168. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-quad-elem.cpp +95 -0
  169. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-quadrule.cpp +14 -0
  170. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-scratch-pool-perf.cpp +291 -0
  171. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-scratch-pool.cpp +133 -0
  172. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-sph-harm.cpp +7 -0
  173. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-static-array.cpp +124 -0
  174. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-tensor.cpp +11 -0
  175. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-utils.hpp +45 -0
  176. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-vec.cpp +6 -0
  177. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-vector.cpp +268 -0
  178. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test-vtudata.cpp +95 -0
  179. virtual_casing-0.2.2/extern/BIEST/extern/SCTL/src/test.cpp +86 -0
  180. virtual_casing-0.2.2/extern/BIEST/geom/LHD-X.mat +0 -0
  181. virtual_casing-0.2.2/extern/BIEST/geom/LHD-Y.mat +0 -0
  182. virtual_casing-0.2.2/extern/BIEST/geom/LHD-Z.mat +0 -0
  183. virtual_casing-0.2.2/extern/BIEST/geom/NCSX +139 -0
  184. virtual_casing-0.2.2/extern/BIEST/geom/Quas3-X.mat +0 -0
  185. virtual_casing-0.2.2/extern/BIEST/geom/Quas3-Y.mat +0 -0
  186. virtual_casing-0.2.2/extern/BIEST/geom/Quas3-Z.mat +0 -0
  187. virtual_casing-0.2.2/extern/BIEST/geom/W7X-X.mat +0 -0
  188. virtual_casing-0.2.2/extern/BIEST/geom/W7X-Y.mat +0 -0
  189. virtual_casing-0.2.2/extern/BIEST/geom/W7X-Z.mat +0 -0
  190. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/bie_solvers.txx +39 -38
  191. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/boundary_integ_op.txx +12 -22
  192. virtual_casing-0.2.2/extern/BIEST/include/biest/kernel.hpp +420 -0
  193. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/surface.txx +4 -4
  194. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/surface_op.hpp +4 -1
  195. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/surface_op.txx +75 -82
  196. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/vacuum-field.hpp +2 -2
  197. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/vacuum-field.txx +31 -7
  198. virtual_casing-0.2.2/extern/BIEST/src/double-layer-convergence.cpp +111 -0
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  434. virtual_casing-0.1.1/extern/pybind11/include/pybind11/functional.h +0 -149
  435. virtual_casing-0.1.1/extern/pybind11/include/pybind11/gil.h +0 -215
  436. virtual_casing-0.1.1/extern/pybind11/include/pybind11/gil_safe_call_once.h +0 -102
  437. virtual_casing-0.1.1/extern/pybind11/include/pybind11/iostream.h +0 -265
  438. virtual_casing-0.1.1/extern/pybind11/include/pybind11/numpy.h +0 -2232
  439. virtual_casing-0.1.1/extern/pybind11/include/pybind11/operators.h +0 -202
  440. virtual_casing-0.1.1/extern/pybind11/include/pybind11/options.h +0 -92
  441. virtual_casing-0.1.1/extern/pybind11/include/pybind11/pybind11.h +0 -3085
  442. virtual_casing-0.1.1/extern/pybind11/include/pybind11/pytypes.h +0 -2655
  443. virtual_casing-0.1.1/extern/pybind11/include/pybind11/stl/filesystem.h +0 -124
  444. virtual_casing-0.1.1/extern/pybind11/include/pybind11/stl.h +0 -648
  445. virtual_casing-0.1.1/extern/pybind11/include/pybind11/stl_bind.h +0 -858
  446. virtual_casing-0.1.1/extern/pybind11/include/pybind11/type_caster_pyobject_ptr.h +0 -61
  447. virtual_casing-0.1.1/extern/pybind11/include/pybind11/typing.h +0 -293
  448. virtual_casing-0.1.1/extern/pybind11/include/pybind11/warnings.h +0 -75
  449. virtual_casing-0.1.1/extern/pybind11/tests/CMakeLists.txt +0 -596
  450. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -86
  451. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -19
  452. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -29
  453. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -37
  454. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -38
  455. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -32
  456. virtual_casing-0.1.1/extern/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -38
  457. virtual_casing-0.1.1/extern/pybind11/tests/test_embed/CMakeLists.txt +0 -56
  458. virtual_casing-0.1.1/extern/pybind11/tools/FindCatch.cmake +0 -76
  459. virtual_casing-0.1.1/extern/pybind11/tools/FindEigen3.cmake +0 -86
  460. virtual_casing-0.1.1/extern/pybind11/tools/FindPythonLibsNew.cmake +0 -320
  461. virtual_casing-0.1.1/extern/pybind11/tools/JoinPaths.cmake +0 -23
  462. virtual_casing-0.1.1/extern/pybind11/tools/check-style.sh +0 -44
  463. virtual_casing-0.1.1/extern/pybind11/tools/cmake_uninstall.cmake.in +0 -23
  464. virtual_casing-0.1.1/extern/pybind11/tools/codespell_ignore_lines_from_errors.py +0 -40
  465. virtual_casing-0.1.1/extern/pybind11/tools/libsize.py +0 -38
  466. virtual_casing-0.1.1/extern/pybind11/tools/make_changelog.py +0 -92
  467. virtual_casing-0.1.1/extern/pybind11/tools/pybind11.pc.in +0 -7
  468. virtual_casing-0.1.1/extern/pybind11/tools/pybind11Common.cmake +0 -416
  469. virtual_casing-0.1.1/extern/pybind11/tools/pybind11Config.cmake.in +0 -233
  470. virtual_casing-0.1.1/extern/pybind11/tools/pybind11GuessPythonExtSuffix.cmake +0 -86
  471. virtual_casing-0.1.1/extern/pybind11/tools/pybind11NewTools.cmake +0 -342
  472. virtual_casing-0.1.1/extern/pybind11/tools/pybind11Tools.cmake +0 -216
  473. virtual_casing-0.1.1/extern/pybind11/tools/pyproject.toml +0 -3
  474. virtual_casing-0.1.1/extern/pybind11/tools/setup_global.py.in +0 -66
  475. virtual_casing-0.1.1/extern/pybind11/tools/setup_main.py.in +0 -46
  476. virtual_casing-0.1.1/extern/pybind11/tools/test-pybind11GuessPythonExtSuffix.cmake +0 -161
  477. virtual_casing-0.1.1/pyproject.toml +0 -8
  478. virtual_casing-0.1.1/setup.cfg +0 -4
  479. virtual_casing-0.1.1/setup.py +0 -134
  480. virtual_casing-0.1.1/src/python.cpp +0 -47
  481. virtual_casing-0.1.1/test/virtual-casing.cpp +0 -76
  482. virtual_casing-0.1.1/virtual_casing.egg-info/PKG-INFO +0 -11
  483. virtual_casing-0.1.1/virtual_casing.egg-info/SOURCES.txt +0 -164
  484. virtual_casing-0.1.1/virtual_casing.egg-info/dependency_links.txt +0 -1
  485. virtual_casing-0.1.1/virtual_casing.egg-info/not-zip-safe +0 -1
  486. virtual_casing-0.1.1/virtual_casing.egg-info/top_level.txt +0 -1
  487. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/cmake/FindFFTW.cmake +0 -0
  488. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/blas.h +0 -0
  489. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/cheb_utils.hpp +0 -0
  490. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/lapack.h +0 -0
  491. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/profile.hpp +0 -0
  492. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/sse2neon.h +0 -0
  493. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/static-array.hpp +0 -0
  494. {virtual_casing-0.1.1 → virtual_casing-0.2.2/extern/BIEST}/extern/SCTL/include/sctl/static-array.txx +0 -0
  495. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/bie_solvers.hpp +0 -0
  496. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/boundary_integ_op.hpp +0 -0
  497. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/mat.hpp +0 -0
  498. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/singular_correction.hpp +0 -0
  499. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest/surface.hpp +0 -0
  500. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/extern/BIEST/include/biest.hpp +0 -0
  501. {virtual_casing-0.1.1 → virtual_casing-0.2.2}/test/test.py +0 -0
@@ -0,0 +1,143 @@
1
+ # This file is based on examples in
2
+ # https://docs.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions
3
+
4
+ # Note that all the "sudo" commands here appear to cause a warning message
5
+ # "sudo: setrlimit(RLIMIT_CORE): operation not permitted"
6
+ # This appears to be a known harmless annoyance:
7
+ # https://gitlab.alpinelinux.org/alpine/aports/-/issues/11122
8
+
9
+ name: Test
10
+
11
+ on: [push, pull_request, workflow_dispatch]
12
+
13
+ concurrency:
14
+ group: ${{ github.workflow }}-${{ github.ref }}
15
+ cancel-in-progress: true
16
+
17
+ jobs:
18
+ test:
19
+ runs-on: ubuntu-latest
20
+
21
+ env:
22
+ OMPI_ALLOW_RUN_AS_ROOT: 1
23
+ OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1
24
+
25
+ strategy:
26
+ fail-fast: false
27
+ matrix:
28
+ python-version: ["3.10", "3.11", "3.12", "3.13", "3.14"] # To sync with coveragerc use 3 level
29
+
30
+ steps:
31
+ # First print out lots of information. We do this in separate
32
+ # "name" blocks because otherwise the output gets mixed together
33
+ # in the github actions log.
34
+
35
+ - name: Print user and group id
36
+ run: set -ex && id
37
+
38
+ - name: PWD
39
+ run: set -ex && pwd
40
+
41
+ - name: ls -l
42
+ run: set -ex && ls -l
43
+
44
+ - name: apt-get stuff needed for compiling
45
+ run: |
46
+ sudo apt-get update
47
+ sudo apt-get install -y build-essential liblapack-dev git m4 libfftw3-dev libopenblas-dev
48
+
49
+ - uses: actions/checkout@v7
50
+ with:
51
+ submodules: recursive
52
+ fetch-depth: 0 # setuptools_scm needs the tags
53
+
54
+ - name: Set up Python ${{ matrix.python-version }}
55
+ uses: actions/setup-python@v7
56
+ with:
57
+ python-version: ${{ matrix.python-version }}
58
+
59
+ - name: which python after python setup
60
+ run: |
61
+ which python
62
+ python --version
63
+
64
+ - name: Ensure pip is installed
65
+ run: |
66
+ python -m ensurepip --upgrade
67
+ python -m pip install --upgrade pip
68
+
69
+ - name: Verify pip
70
+ run: python -m pip --version
71
+
72
+ - name: Install python dependencies
73
+ run: |
74
+ python -m pip install wheel numpy cmake ninja scipy
75
+
76
+ - name: Install virtual-casing package
77
+ run: python -m pip install -v .
78
+
79
+ - name: Run tests
80
+ run: |
81
+ cd test
82
+ python -m unittest -v test.py
83
+
84
+ # The Makefile builds the C API and the standalone binaries, which nothing
85
+ # else in CI covers; a link-order bug went unnoticed here for some time.
86
+ makefile:
87
+ runs-on: ubuntu-latest
88
+
89
+ steps:
90
+ - uses: actions/checkout@v7
91
+ with:
92
+ submodules: recursive
93
+ fetch-depth: 0 # setuptools_scm needs the tags
94
+
95
+ - name: apt-get stuff needed for compiling
96
+ run: |
97
+ sudo apt-get update
98
+ # liblapack-dev pulls a libblas.so provider, so -lblas/-llapack resolve
99
+ sudo apt-get install -y build-essential libfftw3-dev liblapack-dev libopenblas-dev
100
+
101
+ - name: make all
102
+ run: make all -j$(nproc)
103
+
104
+ - name: Run the C API test
105
+ run: ./bin/virtual-casing-c
106
+
107
+
108
+ # A stale .pyi is worse than none: type checkers report errors that are not
109
+ # real. Regenerate and fail if it differs from what is committed.
110
+ stubs:
111
+ runs-on: ubuntu-latest
112
+
113
+ steps:
114
+ - uses: actions/checkout@v7
115
+ with:
116
+ submodules: recursive
117
+ fetch-depth: 0 # setuptools_scm needs the tags
118
+
119
+ - name: apt-get stuff needed for compiling
120
+ run: |
121
+ sudo apt-get update
122
+ sudo apt-get install -y build-essential libfftw3-dev liblapack-dev libopenblas-dev
123
+
124
+ - uses: actions/setup-python@v7
125
+ with:
126
+ python-version: '3.11'
127
+
128
+ - name: Install package and stubgen
129
+ run: python -m pip install . "pybind11-stubgen>=2.5" mypy
130
+
131
+ - name: Regenerate stubs and compare
132
+ run: |
133
+ # force the variant being introspected: importing two of them into one
134
+ # process fails, since they register the same pybind11 types
135
+ VIRTUAL_CASING_ISA=baseline pybind11-stubgen virtual_casing._vc_baseline -o regenerated
136
+ # stubgen leaves trailing whitespace in docstrings; the committed copy has
137
+ # it stripped, so normalise before comparing
138
+ sed -i 's/[[:space:]]*$//' regenerated/virtual_casing/_vc_baseline.pyi
139
+ diff -u src/_vc_baseline.pyi regenerated/virtual_casing/_vc_baseline.pyi \
140
+ || { echo "::error::src/_vc_baseline.pyi is stale; regenerate it, strip trailing whitespace, and commit"; exit 1; }
141
+
142
+ - name: Type-check the stubs themselves
143
+ run: python -m mypy --strict src/__init__.pyi src/_vc_baseline.pyi
@@ -0,0 +1,129 @@
1
+ name: Wheel Builder
2
+
3
+ on: [push, pull_request, workflow_dispatch]
4
+
5
+ concurrency:
6
+ group: ${{ github.workflow }}-${{ github.ref }}
7
+ # a tag build is the one that publishes, so never cancel it
8
+ cancel-in-progress: ${{ !startsWith(github.ref, 'refs/tags/') }}
9
+
10
+ jobs:
11
+ build_wheels:
12
+ name: Build wheels on ${{ matrix.runner }} #(${{ runner.arch }})
13
+ runs-on: ${{ matrix.runner }}
14
+
15
+ strategy:
16
+ fail-fast: false
17
+ matrix:
18
+ include:
19
+ - runner: ubuntu-latest # x86_64
20
+ arch_flag: "-march=ivybridge"
21
+
22
+ - runner: macos-15 # arm64
23
+ deployment_target: 15
24
+ arch_flag: "-mcpu=apple-m1"
25
+
26
+ # every Mac that runs macOS 15 has AVX2, so ivybridge is conservative here
27
+ - runner: macos-15-intel # x86_64
28
+ deployment_target: 15
29
+ arch_flag: "-march=ivybridge"
30
+
31
+ steps:
32
+ - name: Checkout repository
33
+ uses: actions/checkout@v7
34
+ with:
35
+ submodules: recursive
36
+ fetch-depth: 0 # setuptools_scm needs the tags
37
+
38
+ - name: Set up Python
39
+ uses: actions/setup-python@v7
40
+ with:
41
+ python-version: "3.x"
42
+
43
+ - name: Install cibuildwheel
44
+ run: python -m pip install cibuildwheel
45
+
46
+ - name: Build wheels
47
+ run: python -m cibuildwheel --output-dir wheelhouse
48
+ env:
49
+ CIBW_ARCHS_LINUX: x86_64
50
+ CIBW_ENVIRONMENT_LINUX: CI=True VC_ARCH_FLAG=${{ matrix.arch_flag }}
51
+ CIBW_BEFORE_ALL_LINUX: yum install -y lapack-devel openblas-devel fftw-devel
52
+ CIBW_BEFORE_BUILD_LINUX: python -m pip install --upgrade pip setuptools wheel numpy cmake ninja && git config --global --add safe.directory /project
53
+ CIBW_MANYLINUX_X86_64_IMAGE: quay.io/pypa/manylinux_2_28_x86_64
54
+ CIBW_SKIP: "*-musllinux_*"
55
+ CIBW_ENVIRONMENT_MACOS: CI=True VC_ARCH_FLAG=${{ matrix.arch_flag }} MACOSX_DEPLOYMENT_TARGET=${{ matrix.deployment_target }} CC=gcc-12 CXX=g++-12 # with GCC
56
+ #CIBW_ENVIRONMENT_MACOS: CI=True VC_ARCH_FLAG=${{ matrix.arch_flat }} MACOSX_DEPLOYMENT_TARGET=${{ matrix.deployment_target }} OpenMP_ROOT=$(brew --prefix)/opt/libomp # with Apple Clang
57
+ CIBW_BEFORE_ALL_MACOS: brew install fftw lapack gcc@12 libomp openblas
58
+ CIBW_BEFORE_BUILD_MACOS: python -m pip install --upgrade pip setuptools wheel numpy cmake ninja && git config --global --add safe.directory /project
59
+ CIBW_BUILD: cp310-* cp311-* cp312-* cp313-* cp314-*
60
+ # exercise the repaired wheel, not the source build test.yml already covers
61
+ CIBW_TEST_REQUIRES: numpy scipy
62
+ # check_isa.py forces each variant that was built and is runnable here;
63
+ # arm64 builds only baseline, and v4 must not be forced without AVX-512
64
+ CIBW_TEST_COMMAND: >
65
+ python -m unittest discover -s {project}/test -p "test.py" &&
66
+ python {project}/test/check_isa.py
67
+
68
+ - name: Debug with tmate on failure
69
+ if: ${{ failure() && github.event_name == 'workflow_dispatch' }}
70
+ uses: mxschmitt/action-tmate@v3
71
+ with:
72
+ timeout-minutes: 15
73
+
74
+ - name: Upload wheels
75
+ uses: actions/upload-artifact@v7
76
+ with:
77
+ name: wheels-${{ matrix.runner }}
78
+ path: wheelhouse/*.whl
79
+ overwrite: true
80
+
81
+
82
+ build_sdist:
83
+ name: Build source distribution
84
+ runs-on: ubuntu-latest
85
+
86
+ steps:
87
+ - uses: actions/checkout@v7
88
+ with:
89
+ submodules: recursive
90
+ fetch-depth: 0 # setuptools_scm needs the tags
91
+
92
+ - uses: actions/setup-python@v7
93
+ name: Install Python
94
+ with:
95
+ python-version: '3.11'
96
+
97
+ # - name: Install setuptools_scm
98
+ # run: python -m pip install setuptools_scm
99
+
100
+ - name: Build sdist
101
+ run: |
102
+ pip install build
103
+ python -m build --sdist
104
+
105
+ - uses: actions/upload-artifact@v7
106
+ with:
107
+ name: sdist
108
+ path: dist/*.tar.gz
109
+ overwrite: true
110
+
111
+
112
+ upload_pypi:
113
+ needs: [build_wheels, build_sdist]
114
+ runs-on: ubuntu-latest
115
+ # upload to PyPI on every tag starting with 'v'
116
+ if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags/v')
117
+ # alternatively, to publish when a GitHub Release is created, use the following rule:
118
+ # if: github.event_name == 'release' && github.event.action == 'published'
119
+ permissions:
120
+ id-token: write
121
+ steps:
122
+ - uses: actions/download-artifact@v8
123
+ with:
124
+ path: dist
125
+ merge-multiple: true
126
+
127
+ - uses: pypa/gh-action-pypi-publish@release/v1
128
+ with:
129
+ skip-existing: true # so a re-run after a partial upload doesn't 400
@@ -0,0 +1,14 @@
1
+ *~
2
+ bin
3
+ lib
4
+ obj
5
+ *.swp
6
+ *.o
7
+ fort.*
8
+ int2*
9
+ .idea/*
10
+ build/*
11
+ dist/*
12
+ venv/*
13
+ *.egg-info/*
14
+ virtual_casing-stubs/
@@ -0,0 +1,6 @@
1
+ [submodule "extern/BIEST"]
2
+ path = extern/BIEST
3
+ url = https://github.com/dmalhotra/BIEST.git
4
+ [submodule "extern/SCTL"]
5
+ path = extern/SCTL
6
+ url = https://github.com/dmalhotra/SCTL.git
@@ -4,7 +4,7 @@ project(virtual_casing)
4
4
 
5
5
  set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
6
6
  set(CMAKE_POSITION_INDEPENDENT_CODE ON)
7
- set(CMAKE_CXX_STANDARD 11)
7
+ set(CMAKE_CXX_STANDARD 17)
8
8
  set(CMAKE_CXX_STANDARD_REQUIRED ON)
9
9
 
10
10
  OPTION (USE_PROFILER "Activate code profiling." OFF)
@@ -27,7 +27,11 @@ if (DEFINED ENV{CONDA_BUILD})
27
27
  endif ()
28
28
 
29
29
 
30
- find_package (BLAS)
30
+ # Wheels turn this off (pyproject.toml): one N=1 dgemm, no LAPACK, ~80% of wheel size
31
+ option (VC_USE_BLAS "Link BLAS/LAPACK; SCTL falls back to its own routines without them" ON)
32
+ if (VC_USE_BLAS)
33
+ find_package (BLAS)
34
+ endif ()
31
35
  if (BLAS_FOUND)
32
36
  add_definitions (-DSCTL_HAVE_BLAS)
33
37
  if (NOT ${BLA_VENDOR} MATCHES "^Intel")
@@ -41,32 +45,13 @@ if (BLAS_FOUND)
41
45
  endif ()
42
46
 
43
47
  list(APPEND CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/cmake)
44
- find_package(FFTW COMPONENTS FLOAT_LIB DOUBLE_LIB LONGDOUBLE_LIB DOUBLE_OPENMP_LIB)
48
+ find_package(FFTW COMPONENTS DOUBLE_LIB)
45
49
  if(FFTW_DOUBLE_LIB_FOUND)
46
50
  message(STATUS "FFTW_INCLUDE_DIR is ${FFTW_INCLUDE_DIRS}")
47
51
  add_definitions (-DSCTL_HAVE_FFTW)
48
52
  include_directories("${FFTW_INCLUDE_DIRS}")
49
53
  endif()
50
- if (FFTW_FLOAT_LIB_FOUND)
51
- add_definitions (-DSCTL_HAVE_FFTWF)
52
- endif()
53
- if (FFTW_LONGDOUBLE_LIB_FOUND)
54
- add_definitions (-DSCTL_HAVE_FFTWL)
55
- endif()
56
- if (FFTW_FLOAT_OPENMP_FOUND)
57
- add_definitions (-DSCTL_FFTWF_THREADS)
58
- endif()
59
-
60
- set(Python_FIND_STRATEGY LOCATION)
61
- # find_package(Python 3 COMPONENTS Interpreter Development.Module NumPy)
62
- find_package(Python 3 COMPONENTS Interpreter Development.Module)
63
-
64
- message(STATUS "Python executable is ${Python_EXECUTABLE}")
65
- message(STATUS "Python Development Module found value is ${Python_Development.Module_FOUND}")
66
- message(STATUS "Python header dirs are ${Python_INCLUDE_DIRS}")
67
- message(STATUS "Python library dirs are ${Python_LIBRARY_DIRS}")
68
- message(STATUS "Python version is ${Python_VERSION}")
69
-
54
+ # float/long-double FFTW is never called; linking it only bloats the wheel
70
55
 
71
56
  find_package(Git QUIET)
72
57
  if(GIT_FOUND AND EXISTS "${PROJECT_SOURCE_DIR}/.git")
@@ -103,52 +88,48 @@ endif()
103
88
 
104
89
  find_package(OpenMP REQUIRED)
105
90
 
106
- add_subdirectory(extern/pybind11)
107
- #Python_add_library(${PROJECT_NAME} MODULE src/python.cpp)
108
- #target_link_libraries(${PROJECT_NAME} PRIVATE pybind11::pybind11)
109
- pybind11_add_module(${PROJECT_NAME} src/python.cpp)
110
- add_executable(vc_testing EXCLUDE_FROM_ALL test/virtual-casing.cpp)
111
- # Fix for PowerPC with PGI compiler
112
- target_compile_options(vc_testing PUBLIC "$<$<CXX_COMPILER_ID:PGI>:-Wc,--pending_instantiations=1000>")
113
- target_compile_options(${PROJECT_NAME} PUBLIC "$<$<CXX_COMPILER_ID:PGI>:-Wc,--pending_instantiations=1000>")
114
-
115
- if(OpenMP_CXX_FOUND)
116
- target_link_libraries(vc_testing PRIVATE OpenMP::OpenMP_CXX)
117
- target_link_libraries(${PROJECT_NAME} PRIVATE OpenMP::OpenMP_CXX)
118
- endif()
91
+ if (SKBUILD)
92
+ find_package(pybind11 CONFIG REQUIRED)
93
+
94
+ # SCTL selects its vector ISA at compile time and has no runtime dispatch, so
95
+ # reaching AVX2/AVX-512 means compiling the extension once per level and
96
+ # choosing in __init__.py. AVX-512 cannot be a single-wheel target: Intel
97
+ # fused it off on client CPUs from Alder Lake onwards.
98
+ option (VC_DISPATCH "Build one extension per x86-64 instruction-set level" ON)
99
+ set(vc_variants baseline)
100
+ if (VC_DISPATCH AND CMAKE_SYSTEM_PROCESSOR MATCHES "x86_64|AMD64")
101
+ list(APPEND vc_variants v3 v4)
102
+ set(vc_march_v3 "-march=x86-64-v3")
103
+ set(vc_march_v4 "-march=x86-64-v4")
104
+ endif()
119
105
 
120
- if(FFTW_DOUBLE_LIB_FOUND)
121
- message(STATUS "FFT DOUBLE FOUND")
122
- target_link_libraries(vc_testing PUBLIC FFTW::Double)
123
- target_link_libraries(${PROJECT_NAME} PUBLIC FFTW::Double)
124
- target_include_directories(vc_testing PRIVATE ${FFTW_INCLUDE_DIRS})
125
- target_include_directories(${PROJECT_NAME} PRIVATE ${FFTW_INCLUDE_DIRS})
126
- endif()
127
- if (FFTW_FLOAT_LIB_FOUND)
128
- target_link_libraries (vc_testing PUBLIC FFTW::Float)
129
- target_link_libraries (${PROJECT_NAME} PUBLIC FFTW::Float)
106
+ foreach (variant IN LISTS vc_variants)
107
+ set(tgt _vc_${variant})
108
+ pybind11_add_module(${tgt} src/python.cpp)
109
+ target_compile_definitions(${tgt} PRIVATE VC_MODULE_NAME=${tgt})
110
+ # after CMAKE_CXX_FLAGS, so this -march wins over VC_ARCH_FLAG
111
+ target_compile_options(${tgt} PRIVATE ${vc_march_${variant}}
112
+ "$<$<CXX_COMPILER_ID:PGI>:-Wc,--pending_instantiations=1000>")
113
+ target_include_directories(${tgt} PRIVATE "$<$<BOOL:${FFTW_DOUBLE_LIB_FOUND}>:${FFTW_INCLUDE_DIRS}>"
114
+ "include" "extern/SCTL/include" "extern/BIEST/include")
115
+ target_link_libraries(${tgt} PRIVATE "$<$<BOOL:${OpenMP_CXX_FOUND}>:OpenMP::OpenMP_CXX>"
116
+ "$<$<BOOL:${FFTW_DOUBLE_LIB_FOUND}>:FFTW::Double>"
117
+ "$<$<BOOL:${BLAS_FOUND}>:${BLAS_LIBRARIES}>" "$<$<BOOL:${LAPACK_FOUND}>:${LAPACK_LIBRARIES}>")
118
+ install(TARGETS ${tgt} LIBRARY DESTINATION ${PROJECT_NAME})
119
+ endforeach()
120
+
121
+ pybind11_add_module(_cpu src/cpu_features.cpp) # baseline: must run anywhere
122
+ install(TARGETS _cpu LIBRARY DESTINATION ${PROJECT_NAME})
123
+ # py.typed opts the package in to PEP 561; without it the stubs are ignored
124
+ install(FILES src/__init__.py src/__init__.pyi src/_vc_baseline.pyi src/py.typed
125
+ DESTINATION ${PROJECT_NAME})
130
126
  endif()
131
- if (FFTW_LONGDOUBLE_LIB_FOUND)
132
- target_link_libraries (vc_testing PUBLIC FFTW::LongDouble)
133
- target_link_libraries (${PROJECT_NAME} PUBLIC FFTW::LongDouble)
134
- endif()
135
- if (FFTW_FLOAT_OPENMP_FOUND)
136
- target_link_libraries (vc_testing PUBLIC FFTW::DoubleOpenMP)
137
- target_link_libraries (${PROJECT_NAME} PUBLIC FFTW::DoubleOpenMP)
138
- endif()
139
- if (BLAS_FOUND)
140
- target_link_libraries (vc_testing PRIVATE ${BLAS_LIBRARIES})
141
- target_link_libraries (${PROJECT_NAME} PRIVATE ${BLAS_LIBRARIES})
142
- endif ()
143
- if (LAPACK_FOUND)
144
- target_link_libraries (vc_testing PRIVATE ${LAPACK_LIBRARIES})
145
- target_link_libraries (${PROJECT_NAME} PRIVATE ${LAPACK_LIBRARIES})
146
- endif ()
147
-
148
- target_include_directories(vc_testing PRIVATE "include" "extern/SCTL/include")
149
- target_include_directories(vc_testing PRIVATE "include" "extern/BIEST/include")
150
- target_include_directories(${PROJECT_NAME} PRIVATE "include" "extern/SCTL/include")
151
- target_include_directories(${PROJECT_NAME} PRIVATE "include" "extern/BIEST/include")
152
127
 
153
- get_target_property(INC_DIRS vc_testing INCLUDE_DIRECTORIES)
154
- message(STATUS "vc_testing include directories are ${INC_DIRS}")
128
+ add_executable(vc_testing EXCLUDE_FROM_ALL test/virtual-casing.cpp)
129
+ # Fix for PowerPC with PGI compiler
130
+ target_compile_options(vc_testing PUBLIC "$<$<CXX_COMPILER_ID:PGI>:-Wc,--pending_instantiations=1000>")
131
+ target_include_directories(vc_testing PRIVATE "$<$<BOOL:${FFTW_DOUBLE_LIB_FOUND}>:${FFTW_INCLUDE_DIRS}>"
132
+ "include" "extern/SCTL/include" "extern/BIEST/include")
133
+ target_link_libraries(vc_testing PUBLIC $<$<BOOL:${FFTW_DOUBLE_LIB_FOUND}>:FFTW::Double>
134
+ "$<$<BOOL:${BLAS_FOUND}>:${BLAS_LIBRARIES}>"
135
+ "$<$<BOOL:${LAPACK_FOUND}>:${LAPACK_LIBRARIES}>" $<$<BOOL:${OpenMP_CXX_FOUND}>:OpenMP::OpenMP_CXX>)
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@@ -0,0 +1,9 @@
1
+ include src/python.cpp src/cpu_features.cpp src/__init__.py
2
+ include src/__init__.pyi src/_vc_baseline.pyi src/py.typed
3
+ include test/virtual-casing.cpp
4
+ include LICENSE README.md
5
+ graft include
6
+ graft extern/SCTL/include
7
+ graft extern/BIEST/include
8
+ graft cmake
9
+ global-include CMakeLists.txt *.cmake