viper-in-python 2.0.1__tar.gz → 2.0.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (68) hide show
  1. {viper_in_python-2.0.1/viper_in_python.egg-info → viper_in_python-2.0.2}/PKG-INFO +1 -1
  2. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyproject.toml +1 -1
  3. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/__init__.py +1 -1
  4. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/setup.py +1 -1
  5. {viper_in_python-2.0.1 → viper_in_python-2.0.2/viper_in_python.egg-info}/PKG-INFO +1 -1
  6. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/LICENSE +0 -0
  7. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/MANIFEST.in +0 -0
  8. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/README.md +0 -0
  9. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/NaRnEA.py +0 -0
  10. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_NaRnEA/NaRnEA_classic.py +0 -0
  11. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_NaRnEA/NaRnEA_meta.py +0 -0
  12. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_aREA/aREA_classic.py +0 -0
  13. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_aREA/aREA_meta.py +0 -0
  14. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_aziz_metacell.py +0 -0
  15. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_corr_distance.py +0 -0
  16. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_filtering_funcs.py +0 -0
  17. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_helpers_meta.py +0 -0
  18. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/__init__.py +0 -0
  19. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/_load.py +0 -0
  20. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/_load_get_path.py +0 -0
  21. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/_load_msigdb.py +0 -0
  22. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/_load_pisces.py +0 -0
  23. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/_load_regulators.py +0 -0
  24. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_load/_load_translate.py +0 -0
  25. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_metacell_funcs.py +0 -0
  26. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_pl_sns_heatmap.py +0 -0
  27. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_pl_vis_net.py +0 -0
  28. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_pp.py +0 -0
  29. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_rep_subsample_funcs.py +0 -0
  30. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_tl.py +0 -0
  31. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_translate.py +0 -0
  32. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/_viper.py +0 -0
  33. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/aREA.py +0 -0
  34. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/config.py +0 -0
  35. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/cotfs-hugo-mouse.txt +0 -0
  36. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/cotfs-hugo.txt +0 -0
  37. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/sig-hugo-mouse.txt +0 -0
  38. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/sig-hugo.txt +0 -0
  39. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/surf-hugo-mouse.txt +0 -0
  40. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/surf-hugo.txt +0 -0
  41. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/tfs-hugo-mouse.txt +0 -0
  42. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulatorIDs/tfs-hugo.txt +0 -0
  43. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulons/msigdb-c2-as-regulon.parquet.gzip +0 -0
  44. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulons/msigdb-c5-as-regulon.parquet.gzip +0 -0
  45. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulons/msigdb-c6-as-regulon.parquet.gzip +0 -0
  46. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulons/msigdb-c7-as-regulon.parquet.gzip +0 -0
  47. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/regulons/msigdb-h-as-regulon.parquet.gzip +0 -0
  48. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/data/translate/human_mouse_gene_translation.csv +0 -0
  49. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/interactome.py +0 -0
  50. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/load.py +0 -0
  51. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/pl.py +0 -0
  52. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/pleiotropy/__init__.py +0 -0
  53. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/pleiotropy/areareg.py +0 -0
  54. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/pleiotropy/shadow_regulon_py.py +0 -0
  55. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/pleiotropy/table_to_interactome.py +0 -0
  56. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/pp.py +0 -0
  57. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/tl.py +0 -0
  58. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/setup.cfg +0 -0
  59. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/tests/test_interactome.py +0 -0
  60. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/tests/test_metacells.py +0 -0
  61. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/tests/test_preprocess.py +0 -0
  62. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/tests/test_similarity.py +0 -0
  63. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/tests/test_tools.py +0 -0
  64. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/tests/test_viper.py +0 -0
  65. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/viper_in_python.egg-info/SOURCES.txt +0 -0
  66. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/viper_in_python.egg-info/dependency_links.txt +0 -0
  67. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/viper_in_python.egg-info/requires.txt +0 -0
  68. {viper_in_python-2.0.1 → viper_in_python-2.0.2}/viper_in_python.egg-info/top_level.txt +0 -0
{viper_in_python-2.0.1/viper_in_python.egg-info → viper_in_python-2.0.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: viper-in-python
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- Version: 2.0.1
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+ Version: 2.0.2
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  Summary: A package for VIPER-based Protein Activity analysis of transcriptomic data in Python
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  Home-page: https://github.com/alevax/pyviper
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  Author: Alexander L.E. Wang & Luca Zanella & Zizhao Lin
{viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "viper-in-python"
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- version = "2.0.1"
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+ version = "2.0.2"
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  description = "A package for VIPER-based Protein Activity analysis of transcriptomic data in Python"
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  readme = "README.md"
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  requires-python = ">=3.8"
{viper_in_python-2.0.1 → viper_in_python-2.0.2}/pyviper/__init__.py RENAMED
@@ -9,4 +9,4 @@ from pyviper.load import *
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  from pyviper.pl import *
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  from pyviper.tl import *
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- __version__ = "2.0.0"
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+ __version__ = "2.0.2"
{viper_in_python-2.0.1 → viper_in_python-2.0.2}/setup.py RENAMED
@@ -11,7 +11,7 @@ long_description = (this_directory / "README.md").read_text()
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  setuptools.setup(
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  name="viper-in-python",
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- version="2.0.1",
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+ version="2.0.2",
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  author="Alexander L.E. Wang & Luca Zanella & Zizhao Lin",
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  author_email="aw3436@cumc.columbia.edu",
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  packages=setuptools.find_packages(),
{viper_in_python-2.0.1 → viper_in_python-2.0.2/viper_in_python.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: viper-in-python
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- Version: 2.0.1
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+ Version: 2.0.2
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  Summary: A package for VIPER-based Protein Activity analysis of transcriptomic data in Python
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  Home-page: https://github.com/alevax/pyviper
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  Author: Alexander L.E. Wang & Luca Zanella & Zizhao Lin
{viper_in_python-2.0.1 → viper_in_python-2.0.2}/LICENSE RENAMED
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